mRNA_Ecto-sp13_S_contig19419.6231.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: D7FHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH4_ECTSI) HSP 1 Score: 330 bits (846), Expect = 2.520e-109 Identity = 165/172 (95.93%), Postives = 166/172 (96.51%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKTREAVLHLTGYRHQGFYGRSYKKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
GKRVAVVDKKDLLGGVCVHTGTIP REAVLHLTGYRHQGFYGRSYKKTISMPDLLSRVKKVE AETDVVTDQL REGVEIITGTARFVESDSGDSRVSAMVLRS GDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGG+THIPR
Sbjct: 15 GKRVAVVDKKDLLGGVCVHTGTIP---REAVLHLTGYRHQGFYGRSYKKTISMPDLLSRVKKVEAAETDVVTDQLSREGVEIITGTARFVESDSGDSRVSAMVLRSLGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGITHIPR 183
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: A0A6H5JP49_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP49_9PHAE) HSP 1 Score: 287 bits (734), Expect = 5.000e-96 Identity = 140/146 (95.89%), Postives = 144/146 (98.63%), Query Frame = 1
Query: 79 TREAVLHLTGYRHQGFYGRSYKKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
+REAVLHLTGYRHQGFYGRSYKKTISMPDLLSRVKKVEGAETDVVTDQL REGVEIITGTARFV+SDSGDSR+SAMVLRS GDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGG+THIPR
Sbjct: 5 SREAVLHLTGYRHQGFYGRSYKKTISMPDLLSRVKKVEGAETDVVTDQLSREGVEIITGTARFVKSDSGDSRMSAMVLRSLGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGITHIPR 150
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: A0A835ZER9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA) HSP 1 Score: 227 bits (578), Expect = 2.160e-68 Identity = 115/184 (62.50%), Postives = 140/184 (76.09%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT-REAVLHLTGYRHQGFYGRSY---KKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDS--------RVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
G+RVAVVDK ++GGVCVHTGTIPSKT REAVLHLTG+RHQGFYGR+Y ++ IS+PDLL RV+KVE ETD+V DQ+RREGVE+ITGTARF E+D D+ V MVL++ HE+ +S YRH+ A+ K +SAE L+ACGTRP+RP IPFDG +FDSDQLLWGGV +PR
Sbjct: 78 GRRVAVVDKLGMIGGVCVHTGTIPSKTFREAVLHLTGFRHQGFYGRAYQPWRERISVPDLLLRVQKVEKTETDIVVDQMRREGVEVITGTARFAEADEDDAFTDATSEGAVRVMVLKTDA-SHESEASAYRHLDANMAKMALSAENVLIACGTRPLRPAHIPFDGVRVFDSDQLLWGGVRDVPR 260
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: D7FKJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI) HSP 1 Score: 212 bits (539), Expect = 1.940e-62 Identity = 108/176 (61.36%), Postives = 136/176 (77.27%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT-REAVLHLTGYRHQGFYGRSYKKT---ISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
GK V +VDK LGGVCVHTGTIPSKT REAVLHLTG+RHQGFYGRS ++ +++PD+L+RV E ET+VV DQL+REG+E+I+GTARF+ G+ MVLR+S ++ EA +S YRH+ A P +SA+RFLVACGTRP+R PD+PFDG+ +FDSDQLLWGGV +PR
Sbjct: 65 GKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPH-RVMVLRTS-EKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPR 235
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: A0A662X7S1_9STRA (Pyr_redox_2 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7S1_9STRA) HSP 1 Score: 202 bits (513), Expect = 5.280e-62 Identity = 106/175 (60.57%), Postives = 127/175 (72.57%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT-REAVLHLTGYRHQGFYG--RSYKKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
GK VAV+DK+D+LGGVCVHTGT+PSKT REA LHLTGYRH+ FY + K + D+L RVKKVEGAETD+ QL R GVE+I GTARF+ SGD + A++ S D +EAA+ RH AD K V++A++FLV GTRP R PDIPFDG IFDSDQLLWGGV +PR
Sbjct: 80 GKSVAVIDKRDMLGGVCVHTGTVPSKTFREATLHLTGYRHRSFYNGQTAPTKRFGVEDILQRVKKVEGAETDITRHQLLRNGVELINGTARFL---SGDKNMIAVL---SNDSYEAATDAKRHSSADICKRVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGGVKTVPR 248
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: A0A4D9CNB1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNB1_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.130e-57 Identity = 96/178 (53.93%), Postives = 127/178 (71.35%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT-REAVLHLTGYRHQGFYGRSY---KKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPRLF 522
G+RVA++DK +GGVCVHTGTIPSKT REAVLHLTGYRHQGFYG+S + SM ++L RV+KVE E +V Q+RR GV ++TGTARF+E+ + D+ V VL + D + Y+H A PK++++AE+ ++ACGTRPVR + FDG +FDSDQLLWGG+ +PR F
Sbjct: 81 GRRVAMIDKNSQMGGVCVHTGTIPSKTFREAVLHLTGYRHQGFYGKSTFTSSRRSSMNEILQRVQKVEDVEAEVTRHQMRRNGVHLVTGTARFLENGANDAHVKLAVLLT--DPEQERKGIYKHREASLPKTLLTAEKVMIACGTRPVRQEETVFDGKRVFDSDQLLWGGIDRVPRSF 256
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: A0A3R7H1X6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H1X6_9STRA) HSP 1 Score: 194 bits (494), Expect = 3.190e-56 Identity = 101/177 (57.06%), Postives = 127/177 (71.75%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT---REAVLHLTGYRHQGFYGR--SYKKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
GK VA+VDK+D+LGGVCVHTGT+PSK REA +HLTGYRH+ FY K I + D+L RVKKVE AETD+ QL+R GV++I+GTARF+ +GDS + A++ S +E+E A+ RH AD K V++A++FLV GTRP R PDIPFDG IFDSDQLLWG V +PR
Sbjct: 78 GKSVAIVDKRDMLGGVCVHTGTVPSKASTFREAAMHLTGYRHRAFYNGHGGISKRIGVEDILQRVKKVEAAETDITRHQLQRNGVQLISGTARFL---AGDSHMLAVL---SNEEYETATDAKRHTEADICKRVLTADKFLVCVGTRPARHPDIPFDGETIFDSDQLLWGKVKMVPR 248
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: A0A6A3FH22_9STRA (Putative soluble pyridine nucleotide transhydrogenase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FH22_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.340e-54 Identity = 97/175 (55.43%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT-REAVLHLTGYRHQGFYGRSY--KKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
GK VA++DK+D++GGVCVHTGT+PSKT REA LHLTGYRH+ FY K + D+L RVKKVE AETD+ QL R GV++I GTARF+ ++ MV S + +E A+ RH AD K V++A++FLV GTRP R PDIPFDG IFDSDQLLWG V +PR
Sbjct: 78 GKSVAIIDKRDMMGGVCVHTGTVPSKTFREAALHLTGYRHKAFYNGQAGPSKRFGVEDILQRVKKVEDAETDITRHQLMRNGVQLINGTARFLPGNNH------MVAVLSNESYETATDAKRHTSADICKRVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGKVKTVPR 246
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: A0A5D6XJI3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI3_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.200e-54 Identity = 99/175 (56.57%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT-REAVLHLTGYRHQGFYG--RSYKKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
GK VAV+DK+D+LGGVC+HTGT+PSKT REA LHLT YRH+ FY S K + D+L RVKKVE AETD+ QL R GVE+I GTARF+ S + MV S D + A+ RH A K V++A++FL+A GTRP R PDIPFDG IFDSDQLLWGGV +P+
Sbjct: 68 GKSVAVIDKRDMLGGVCIHTGTVPSKTFREATLHLTAYRHRSFYDGHSSPGKRFGIEDILQRVKKVEHAETDITRHQLLRNGVELINGTARFLPSPDKN-----MVAVLSNDSYMTATDAKRHSSASICKRVLTADKFLIAVGTRPARRPDIPFDGETIFDSDQLLWGGVKTVPK 237
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Match: K3WL68_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL68_GLOUD) HSP 1 Score: 187 bits (475), Expect = 1.540e-53 Identity = 96/175 (54.86%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 GKRVAVVDKKDLLGGVCVHTGTIPSKT-REAVLHLTGYRHQGFYG--RSYKKTISMPDLLSRVKKVEGAETDVVTDQLRREGVEIITGTARFVESDSGDSRVSAMVLRSSGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGVTHIPR 516
GK VA++DK+D+ GGVCVHTGT+PSKT REA LHLT YRH+ FY S K + D+L RVKKVE AETD+ QL R GVE+I GTARF+ + + M+ S D + A+ RH AD K V++A++FL+A GTRP R PDIPFDG +FDSDQLLWGGV +P+
Sbjct: 72 GKSVAIIDKRDMHGGVCVHTGTVPSKTFREATLHLTAYRHRSFYDGQSSPTKRFGIEDILQRVKKVEHAETDITRHQLLRNGVELINGTARFLPDANKN-----MIAVLSNDSYTTATDAKRHASADICKRVLTADKFLIAVGTRPARRPDIPFDGQAVFDSDQLLWGGVKTVPK 241 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19419.6231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19419.6231.1 >prot_Ecto-sp13_S_contig19419.6231.1 ID=prot_Ecto-sp13_S_contig19419.6231.1|Name=mRNA_Ecto-sp13_S_contig19419.6231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp GKRVAVVDKKDLLGGVCVHTGTIPSKTREAVLHLTGYRHQGFYGRSYKKTback to top mRNA from alignment at Ecto-sp13_S_contig19419:204..3194- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19419.6231.1 ID=mRNA_Ecto-sp13_S_contig19419.6231.1|Name=mRNA_Ecto-sp13_S_contig19419.6231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2991bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19419:204..3194- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19419:204..3194- >mRNA_Ecto-sp13_S_contig19419.6231.1 ID=mRNA_Ecto-sp13_S_contig19419.6231.1|Name=mRNA_Ecto-sp13_S_contig19419.6231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=528bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19419:204..3194- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |