mRNA_Ecto-sp13_S_contig19406.6226.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: D7FW13_ECTSI (YHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW13_ECTSI) HSP 1 Score: 263 bits (673), Expect = 1.050e-80 Identity = 118/127 (92.91%), Postives = 121/127 (95.28%), Query Frame = 1
Query: 1 TPNLVAFFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWFPAERGGPAPFNTACLCSEEMCVDG 381
TPNLV+ FGDYRFYFSSIENLRTFESDPV+YIPAWGGFCSYGVAAE FWR DILGPFGDPSKWLILPGDGKLHVFRSERPMTKFL APGENLEAGDAIWNGWFPAERGG AP NTACLCSEEMCV+G
Sbjct: 136 TPNLVSLFGDYRFYFSSIENLRTFESDPVRYIPAWGGFCSYGVAAETFWRPDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGGAAPLNTACLCSEEMCVNG 262
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.380e-30 Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = 1
Query: 31 YRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWF---PAERGGP-APFNTACLCSEEMCVDG 381
Y F FS++EN FESDP KY+PAWGGFCS+G++ E W D+LGP +P WLI D +L++FRSE P KF ++ G+ +W WF P+ G PFNTAC CSEE C DG
Sbjct: 145 YTFLFSTLENQLEFESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIWLI--EDDRLYLFRSETPYDKFKDDKARYIKHGNQVWTEWFGGNPSNEGTVMTPFNTACFCSEESCADG 263
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI) HSP 1 Score: 127 bits (318), Expect = 2.390e-29 Identity = 58/121 (47.93%), Postives = 76/121 (62.81%), Query Frame = 1
Query: 31 YRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWF---PAERGGP-APFNTACLCSEEMCVDG 381
Y F FS++EN FESDP +Y+PAWGGFC +G++ E W D+LGP +P WLI D +L++FRSE P KF+ ++ G+ +W WF P+ G PFNTAC CSEE C DG
Sbjct: 145 YTFLFSTLENKLEFESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFWLI--EDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCADG 263
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: D7FW14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW14_ECTSI) HSP 1 Score: 119 bits (298), Expect = 2.800e-28 Identity = 54/108 (50.00%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 61 LRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWFPA--ERGGPAPFNTACLCSEEMCVD 378
LR + D +KY+PAWGGFCSYG+A E W S LGPFG+PSKW I G+LH+FRS P +F NL+ G+A+W GWF E P NTAC C++ +C D
Sbjct: 15 LRFSQHDKLKYVPAWGGFCSYGIANESVWTSTTLGPFGNPSKWGIY--GGRLHIFRSSTPKEEFEEDIPGNLDRGNAVWEGWFGGMEESLMVPPINTACFCNDHICDD 120
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 119 bits (299), Expect = 4.690e-27 Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 22 FGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWF-----PAERGGPAPFNTACLCSEEMCVD 378
+ Y F F+S +N FE+ P+ YIPAWGGFC+YG+AAE +W LGP DP+ WLI D L +FRSE P F+ N+ G+ IW GW+ P + NTACLC+ E+C+D
Sbjct: 111 YNGYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITD-DNVLRIFRSEVPKAYFMEDIPGNIATGNRIWTGWWGEGTLPGADDTGSAMNTACLCNIEICLD 233
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: A0A6H5KGH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH5_9PHAE) HSP 1 Score: 109 bits (273), Expect = 4.400e-24 Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 1
Query: 1 TPNLVAFFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWFPAERGGPA--PFNTACLCSEEMCVD 378
+PNL++ FG+YRF+FSS+ENLR FE+ A G +A E W S LGPFG+PSKW I G+LH+FRS P +F NL+ G+A+W WF A P NTAC C++ +C D
Sbjct: 58 SPNLMSVFGNYRFFFSSVENLRVFEARGFSLRSA-GEKIWQRIANEPVWTSTTLGPFGNPSKWGIY--GGRLHIFRSSMPKEEFEQDIPGNLDRGNAVWERWFGGMEESLAVPPINTACFCNDRICDD 182
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 94.0 bits (232), Expect = 1.900e-18 Identity = 45/108 (41.67%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 31 YRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWFPAERGGPAPFNTACL 354
+ FYFSS EN+ FESDP KY+PAWGGFC+YGVA E +W ++ + P W I+ DG+L F F + + + GDA W+GW G +NT C
Sbjct: 48 FEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRII--DGRLFFFHDIGVAAWFAALLPDAIREGDATWHGW------GLEGYNTNCF 147
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.500e-17 Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 1 TPNLVAFFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAP-GENLEAGDAIWNGWFPAERGGPAPFNTACL 354
+ + A +G+Y FYF + EN TF S+P KY+P +GGFCSYG+ E FW D LGP + + W+I D L VF P KF+S E +E G+ IW+ W+ FNT C
Sbjct: 169 SADYAAKYGEYTFYFENAENRATFLSNPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVWIIY--DDHLFVFMYCTPEHKFVSRNITEEIERGNQIWSTWW----NDVPTFNTGCF 281
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: A0A7S3UXT1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXT1_HETAK) HSP 1 Score: 84.3 bits (207), Expect = 3.310e-14 Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 1 TPNLVAFFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRSDIL--GPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWFPAERGGPAPFNTAC----LCSEEMCVD 378
+P + + Y FYFS+ EN FES P Y+PAWGGFCSYGV+ E +W ++ + G + + W ++ DG+L +F F + + GDA+W W G FN C L S+ + +D
Sbjct: 116 SPEFTSIYKGYTFYFSTRENQDRFESSPETYVPAWGGFCSYGVSQESWWTAETMRAGVYASGA-WRVV--DGRLFLFHDPDVAALFAGLLPDAVRQGDAVWGAW------GLDGFNAGCFNVDLSSDPLGLD 238
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Match: A0A7S2E359_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E359_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-9 Identity = 46/136 (33.82%), Postives = 64/136 (47.06%), Query Frame = 1
Query: 31 YRFYFSSIENLRTFESDPVKYIPAWGGFCSYGV----------------AAEKFWRSDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLSAPGENLEAGDAIWNGWFPAER---GG--PA-----PFNTACLCS 360
Y F F++ E+ +F + P KY+P +GGFCSYG+ AA W + LGP G+P+ W + GD F + + F N+ GDA WN WF ++ GG PA P N+ CL S
Sbjct: 120 YEFRFTTAEHRESFIAAPHKYLPKYGGFCSYGITNEFAGDKTMGMDEAGAAGWPWERNYLGPPGNPAAWTLYKGDLYFAFFSTV--IETFEEDIDANIARGDARWNEWFGGDKLSSGGDEPAVTRYGPVNSECLAS 253 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19406.6226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19406.6226.1 >prot_Ecto-sp13_S_contig19406.6226.1 ID=prot_Ecto-sp13_S_contig19406.6226.1|Name=mRNA_Ecto-sp13_S_contig19406.6226.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp TPNLVAFFGDYRFYFSSIENLRTFESDPVKYIPAWGGFCSYGVAAEKFWRback to top mRNA from alignment at Ecto-sp13_S_contig19406:44..3309- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19406.6226.1 ID=mRNA_Ecto-sp13_S_contig19406.6226.1|Name=mRNA_Ecto-sp13_S_contig19406.6226.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19406:44..3309- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19406:44..3309- >mRNA_Ecto-sp13_S_contig19406.6226.1 ID=mRNA_Ecto-sp13_S_contig19406.6226.1|Name=mRNA_Ecto-sp13_S_contig19406.6226.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=384bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19406:44..3309- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |