mRNA_Ecto-sp13_S_contig19394.6218.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19394.6218.1
Unique NamemRNA_Ecto-sp13_S_contig19394.6218.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: D8LH55_ECTSI (Acetylglutamate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH55_ECTSI)

HSP 1 Score: 439 bits (1129), Expect = 2.170e-153
Identity = 232/236 (98.31%), Postives = 235/236 (99.58%), Query Frame = 1
Query:    1 DLEQNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMDSVKV 708
            DLE+NSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFA+DVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNT+VIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELL QMDSVKV
Sbjct:   64 DLERNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFAQDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTEVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLPQMDSVKV 299          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A836CGP3_9STRA (Acetylglutamate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGP3_9STRA)

HSP 1 Score: 323 bits (829), Expect = 3.580e-108
Identity = 167/232 (71.98%), Postives = 196/232 (84.48%), Query Frame = 1
Query:   13 NSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMDSVKV 708
            N   A VLSDALP+I  H   TIVIKYGGHAMED  ASL FA+DVV+LK CGVNPV+VHGGGPQIAAML RL+I TSFVEG+RV+D  TV++AEMVLCG INKGIASSIK+AGGRA+GLSGKDDNL++A KL K I D  TG  K++D+G VG+I  VNTK+I DLV++GI+P+IAPIGVDE GQTYNCNADTAAGAIAGALKA+RLLLLTDV GVL+KE EL +++ + +V
Sbjct:   44 NQAVAEVLSDALPYIMEHTGETIVIKYGGHAMEDAAASLQFAKDVVLLKSCGVNPVIVHGGGPQIAAMLGRLNIETSFVEGLRVTDTDTVDVAEMVLCGKINKGIASSIKQAGGRAIGLSGKDDNLILADKLQKVITDPGTGISKMLDLGYVGEIKKVNTKIISDLVAAGIIPVIAPIGVDERGQTYNCNADTAAGAIAGALKANRLLLLTDVKGVLSKEGELFEELTTERV 275          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A2W2ALU6_9HYPH (Acetylglutamate kinase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2ALU6_9HYPH)

HSP 1 Score: 264 bits (674), Expect = 3.460e-85
Identity = 132/230 (57.39%), Postives = 181/230 (78.70%), Query Frame = 1
Query:    4 LEQNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
            +++ + TA +LS+ALPF+Q + D+ IV+KYGGHAM D + +  FARD+VMLK CG+NP+VVHGGGPQI  ML +L++   F EG+RV+D AT+ + EMVL GSINK I +SI++AGGRAVG+SGKD NL+IA+KL KK  D ETG+V  +D G VG+   VNT+++E ++ S  +P+IAP+GV  +G+T+N NADTAAGA+A A +A RLLLLTDVAGVL+K+K L+ ++
Sbjct:    1 MDEIAATARILSEALPFLQRYDDQIIVVKYGGHAMVDPKLAHQFARDMVMLKVCGLNPIVVHGGGPQINKMLDKLEVQPEFREGLRVTDEATMSVVEMVLSGSINKSIVASIQQAGGRAVGISGKDGNLMIAEKLTKKKTDPETGKVVEIDFGFVGEPVKVNTEILETIMKSDAIPVIAPVGVGANGETFNVNADTAAGAVATATRAKRLLLLTDVAGVLDKDKNLISEL 230          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A848W655_9PROT (Acetylglutamate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W655_9PROT)

HSP 1 Score: 263 bits (671), Expect = 9.840e-85
Identity = 134/224 (59.82%), Postives = 177/224 (79.02%), Query Frame = 1
Query:   25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMD 696
            AGVLS+ALPF++ HA +T VIKYGGHAM DE  + SFARDVV++KQ G+NPVVVHGGGPQI AML+RL I + FV+G+RV+D  TVEI EMVL GSINK IA++I  AGGRAVG+SGKD NL+ A+K+ +   + ++   K++D+G VG+ T V+  ++ DL  S ++P+IAP+G    G+TYN NADTAAGAIAGAL+A RLL+LTDVAGVL+++ +L+  M+
Sbjct:   10 AGVLSEALPFMRRHAGKTFVIKYGGHAMGDENLAASFARDVVLMKQIGINPVVVHGGGPQIGAMLERLKIKSEFVDGLRVTDRETVEIVEMVLSGSINKAIAAAINTAGGRAVGISGKDGNLIQARKVRRTRTESDSNIEKILDLGFVGEPTEVDPSLLSDLAQSDLIPVIAPLGTGSDGETYNINADTAAGAIAGALEAARLLMLTDVAGVLDRDGKLIPDMN 233          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: UPI0018C6A9BE (acetylglutamate kinase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C6A9BE)

HSP 1 Score: 261 bits (666), Expect = 6.000e-84
Identity = 135/226 (59.73%), Postives = 177/226 (78.32%), Query Frame = 1
Query:   16 SMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
            S TA +LS+ALPF+Q + D+ IV+K+GGHAM DE+ +L FARD+VMLK CG+NPVVVHGGGPQI  ML +L +   F EG+RV+D AT+EI EMVL GSINK I +SI++AGGRAVG+SGKD NLLIA++  K+  D  TG +  VD G VG+ + VNT++I  ++ S  +P+IAP+G+   G TYN NADTAAGAIA AL A RLL+LTDVAGVL+K+K+L++++
Sbjct:    7 SETARILSEALPFLQLYDDQVIVVKFGGHAMVDEKLALQFARDMVMLKVCGLNPVVVHGGGPQINRMLDKLAVKPEFREGLRVTDDATMEIVEMVLSGSINKSIVASIQQAGGRAVGISGKDGNLLIAERYTKEKKDPATGAITRVDFGQVGEPSRVNTEIIHTIMKSDAIPVIAPVGIGWDGGTYNVNADTAAGAIASALSAKRLLMLTDVAGVLDKQKQLIREL 232          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A081BB81_9HYPH (Acetylglutamate kinase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BB81_9HYPH)

HSP 1 Score: 261 bits (666), Expect = 7.270e-84
Identity = 131/223 (58.74%), Postives = 175/223 (78.48%), Query Frame = 1
Query:   25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
            A +LS+ALP++Q +  RT+V+KYGGHAM D   +  FARD+V+LKQ GVNP+VVHGGGPQI +MLKRL+I + F  G+R++D +TVEI EMVL GSINK I  ++ +AGGRAVGL GKD NL++A+KL  KI D E+   K++D+G VG+   VN ++++ +++S I+P+IAPIGV E G TYN NADTAAGAIAGA+ A RLLLLTDV GVL K+ +L+Q++
Sbjct:   20 ARILSEALPYMQRYDKRTVVVKYGGHAMGDAGLAAKFARDIVLLKQAGVNPIVVHGGGPQIGSMLKRLNIESEFASGLRITDKSTVEIVEMVLAGSINKQIVGALNQAGGRAVGLCGKDGNLIVARKLEHKIHDPESNIEKLLDLGFVGEPHRVNPEILQTIIASDIIPVIAPIGVSEEGDTYNINADTAAGAIAGAMNAKRLLLLTDVRGVLGKDGKLIQRL 242          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A3N5H450_9HYPH (Acetylglutamate kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5H450_9HYPH)

HSP 1 Score: 259 bits (661), Expect = 3.430e-83
Identity = 130/224 (58.04%), Postives = 174/224 (77.68%), Query Frame = 1
Query:   22 TAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
            TA +LS+ALPF+Q + D+ IV+KYGGHAM D + +  FARD+VMLK CG+NP+VVHGGGPQI  ML +LD+   F +G+RV+D  T+ + EMVL GSINK I SSI++AGGRAVG+SGKD NL+IA++L KK  D  TGE   +D G VG+   VNT+++E ++ S  +P+IAP+GV  +G ++N NADTAAGAIA A +A RLLLLTDVAGVL+K+K+L+ ++
Sbjct:    9 TARILSEALPFLQRYDDKIIVVKYGGHAMIDPKLAQQFARDMVMLKVCGLNPIVVHGGGPQINKMLDKLDVKAEFRDGLRVTDAETMAVVEMVLAGSINKSIVSSIQQAGGRAVGISGKDGNLMIAERLTKKKTDPATGETVEIDFGFVGEPVRVNTEILETIMKSDAIPVIAPVGVGRNGDSFNVNADTAAGAIATATRAKRLLLLTDVAGVLDKDKQLISEL 232          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A6N6VMS0_9HYPH (Acetylglutamate kinase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VMS0_9HYPH)

HSP 1 Score: 258 bits (658), Expect = 1.430e-82
Identity = 131/231 (56.71%), Postives = 179/231 (77.49%), Query Frame = 1
Query:    1 DLEQNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
            DLE+    A VLS+ALP++Q +  RTIV+KYGGHAM DE   L FARD+V+LKQ G++P+VVHGGGPQI AML RL I + F  G+R++D ATVE+ EMVL GSINK + S + RAGG+AVGL GKD NL++A+K+ +KI D E+   K++D+G VG+   +N ++++ +++S I+P+IAP+GV  +G TYN NADTAAGAIAGA+ A RLLLLTDV GVL+K+  L++++
Sbjct:   17 DLER----ANVLSEALPYMQQYDKRTIVVKYGGHAMGDEALGLEFARDIVLLKQSGIDPIVVHGGGPQIGAMLNRLGIKSEFSGGLRITDKATVEVVEMVLAGSINKNLVSLLNRAGGQAVGLCGKDGNLIVARKVEQKIHDPESNIEKILDLGFVGEPAKINPEILKTIIASDIIPVIAPVGVAPNGDTYNINADTAAGAIAGAMGATRLLLLTDVRGVLDKQGNLIEEL 243          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A6N7FDB8_9PROT (Acetylglutamate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FDB8_9PROT)

HSP 1 Score: 257 bits (657), Expect = 2.520e-82
Identity = 132/228 (57.89%), Postives = 175/228 (76.75%), Query Frame = 1
Query:   25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMDSVKV 708
            A  LS+ALP+++A+A +T VIKYGGHAM D   +  FARD+V+ KQ G+NP+VVHGGGPQI AML+RL I +SFV+G+RV+D ATVEI EMVLCGSINK I ++I  AGG A+G+SGKD NL+ A+KL +K  D ++   +VVD+G VGD   +N  V+ +L  S ++P+IAP+G+   G TYN NADTAAGA+AGA+ A RLL+LTDVAGVL+K K L+ +M + +V
Sbjct:   24 AKTLSEALPYMRAYAGKTFVIKYGGHAMGDPALARLFARDIVLFKQVGINPIVVHGGGPQIGAMLERLKIKSSFVDGLRVTDKATVEIVEMVLCGSINKQIVAAIGEAGGTAIGISGKDGNLIEARKLTRKTRDPDSNIERVVDLGFVGDPARINVGVLMELARSNVIPVIAPLGMGPDGTTYNINADTAAGAVAGAVGAERLLMLTDVAGVLDKTKVLIPEMTAAQV 251          
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A3D5RQI4_9PROT (Acetylglutamate kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A3D5RQI4_9PROT)

HSP 1 Score: 256 bits (654), Expect = 4.200e-82
Identity = 130/223 (58.30%), Postives = 175/223 (78.48%), Query Frame = 1
Query:   25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
            AG+L+DALP+++AH+  T+VIKYGGHAM D++ + SFARD+V+LKQ G+NP+VVHGGGPQI AML+RL I +SF++G+RV+D ATVEI EMVL GSINK I S+I +AGG AVG+SGKD NL+ A+KL +   D  +   K++D+G VG+ + +N  ++     S I+P+IAPIGV   G+T+N NADT AGAIAGA  A RLL+LTDVAGVL+ E +L+++M
Sbjct:   16 AGILADALPYMRAHSGETVVIKYGGHAMGDDKVADSFARDIVLLKQVGINPIVVHGGGPQIGAMLERLKIQSSFIDGLRVTDAATVEIVEMVLSGSINKQIVSAINKAGGSAVGMSGKDGNLIRARKLRRSKRDPGSNIEKLLDLGFVGEPSEINPHILNTFEESDIIPVIAPIGVGSKGETFNINADTVAGAIAGAADASRLLMLTDVAGVLDDEGQLIKEM 238          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH55_ECTSI2.170e-15398.31Acetylglutamate kinase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CGP3_9STRA3.580e-10871.98Acetylglutamate kinase n=1 Tax=Tribonema minus Tax... [more]
A0A2W2ALU6_9HYPH3.460e-8557.39Acetylglutamate kinase n=1 Tax=Aestuariivirga lito... [more]
A0A848W655_9PROT9.840e-8559.82Acetylglutamate kinase n=1 Tax=Alphaproteobacteria... [more]
UPI0018C6A9BE6.000e-8459.73acetylglutamate kinase n=1 Tax=Aestuariivirga lito... [more]
A0A081BB81_9HYPH7.270e-8458.74Acetylglutamate kinase n=1 Tax=Tepidicaulis marinu... [more]
A0A3N5H450_9HYPH3.430e-8358.04Acetylglutamate kinase n=1 Tax=Hyphomicrobiales ba... [more]
A0A6N6VMS0_9HYPH1.430e-8256.71Acetylglutamate kinase n=1 Tax=Parvibaculum sedime... [more]
A0A6N7FDB8_9PROT2.520e-8257.89Acetylglutamate kinase n=1 Tax=Alphaproteobacteria... [more]
A0A3D5RQI4_9PROT4.200e-8258.30Acetylglutamate kinase n=2 Tax=Bacteria TaxID=2 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19394contigEcto-sp13_S_contig19394:747..2961 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score433.7
Seed ortholog evalue5.3e-119
Seed eggNOG ortholog2880.D8LH55
Model size708
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.acetyl-CoA:L-glutamate N-acetyltransferase activity
EggNOG OGsCOG0548@1,KOG2436@2759
Ec32 ortholog descriptionacetylglutamate kinase
Ec32 orthologEc-24_000610.1
Cds size690
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19394.6218.1prot_Ecto-sp13_S_contig19394.6218.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19394 765..2961 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462984.3586395-UTR-Ecto-sp13_S_contig19394:746..7641681462984.3586395-UTR-Ecto-sp13_S_contig19394:746..764Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19394 747..764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462984.3693407-CDS-Ecto-sp13_S_contig19394:764..9081681462984.3693407-CDS-Ecto-sp13_S_contig19394:764..908Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19394 765..908 +
1681462984.3880484-CDS-Ecto-sp13_S_contig19394:1398..14881681462984.3880484-CDS-Ecto-sp13_S_contig19394:1398..1488Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19394 1399..1488 +
1681462984.3989255-CDS-Ecto-sp13_S_contig19394:1786..19811681462984.3989255-CDS-Ecto-sp13_S_contig19394:1786..1981Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19394 1787..1981 +
1681462984.4102836-CDS-Ecto-sp13_S_contig19394:2411..24591681462984.4102836-CDS-Ecto-sp13_S_contig19394:2411..2459Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19394 2412..2459 +
1681462984.4210885-CDS-Ecto-sp13_S_contig19394:2748..29611681462984.4210885-CDS-Ecto-sp13_S_contig19394:2748..2961Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19394 2749..2961 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19394.6218.1

>prot_Ecto-sp13_S_contig19394.6218.1 ID=prot_Ecto-sp13_S_contig19394.6218.1|Name=mRNA_Ecto-sp13_S_contig19394.6218.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
MTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCG
VNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSIN
KGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCV
GDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGAL
KAHRLLLLTDVAGVLNKEKELLQQMDSVKV
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mRNA from alignment at Ecto-sp13_S_contig19394:747..2961+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19394.6218.1 ID=mRNA_Ecto-sp13_S_contig19394.6218.1|Name=mRNA_Ecto-sp13_S_contig19394.6218.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2215bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19394:747..2961+ (Ectocarpus species13 EcNAP12_S_4_19m)
GATCTGGAGCAAAACTCGATGACCGCGGGGGTCTTATCGGACGCTCTTCC CTTCATACAAGCCCACGCAGACAGAACCATTGTCATCAAGTACGGGGGAC ATGCTATGGAAGACGAAGAGGCGTCTCTCTCGTTCGCCCGGGACGTGGTC ATGCTCAAGCAGGTGCTGCGGCACTTGGTGTGGCCCCTCCTCAGTCGATC GGCAGAACGAACGATGTTGTATGAGCTTTCGTTTGATCACTGAGAGCTTC TTTCATTCGTTTGGTGTCGTTGACGTGCAAAAGTACCGTTGTGGCGGCGT GGGTCTGCGATGCTCTGCACAATGCGGCGCGTCTGGTAGAACGTTCGGGG GTAAGGGATAAAAACATGGTCGTCTCTGCTCTCGGGATGCTCCAGTAGCC TTTCATGCTCATGATGTAGCAGCTAGGGAACCCGAGCGCCAGGATTTCGG CTGCATTCGACTTCAGTTTATCCCGACAACGTCTATCTTGTGCACGCTAT CTTCTCTAGTAGCCGTATTGGCGTCCCATTTTTGCTGCTCGTACCTTGCG ATATTGTTATCCAGTTTGTTTGCACCCAATGTGTGCCAACGATAGAGTGT ATCTTATAATTTTGGTCTCCCTCCCTGCTCCGCTCGTGTTGCCTGGTTGC AGTGTGGTGTTAACCCTGTCGTCGTGCATGGGGGAGGCCCGCAGATCGCC GCAATGCTCAAGAGGCTAGATATCCCTACGTCGTTCGTTGAGGTGAGCGT TCTAGCGTGACATGCTTCTATATAAACCGTCCTCGGTGAACAGGACTCGA GATGTTTGGTTGTTTCGCTTCTACGGTGTACAGAAAGAGTGCCGGGTAGA AAAGCGGAGCAACTACTGCACTCTAATACCTATCGTTTTGCTTGGGTTTT TGCACACGGTACGTTCCAAGCGTCCTTTGTTAGCGTGGCATGCTGCGCGA GAAGGGAAAGCAAGGTTACGTACACGCCGCTGACGTTTTTTCCTTTCTCG GTGCCCTCCGATCGCTCTTTTGGACGAACGCACGCTCCAGGGAGTGCGAG TGTCTGACCCCGCCACGGTAGAAATAGCGGAGATGGTTCTTTGCGGTAGC ATCAACAAGGGGATCGCGAGCAGCATCAAGCGCGCTGGTGGGCGAGCAGT AGGCTTGAGTGGAAAGGATGACAACCTGCTGATAGCCAAGAAGCTGGGGA AGAAGATTGTGGACGAAGAAACCGGAGAAGTCAAGGTGAAAGCGGTTGTC ATTTTCAGAATATTTAGAGGTCGACACGACTATTATAACACGTGCTGAGT GGCAAACGACGATGGCTGCCTAGGCATTTTTCGCAAGAGTGGTTAACGAA AGTCTGGCGGGACTGTTCCCTTCCGCAGTGTATATTCCTTGTAGGTAGAA ATTTCCGACCAGGAGGCATTTGTTTTGGTGGTGGTTTGCATCTTCTTGTC GCCCATATGCATACGTACTGGTGGATGGAGATACTTAACTGCTGTTCTAC ATGTGTTCTGGCTTTCATGTATCGACAGCAGTAGTTAACCTCCTTGGTGT GATCGCGCCTGATCACCACGTACTGCCTCCCCCCGCGTATCTACAATAGT TTCACCTGTCGTTCTCAAACGGTTAATCCTCGCCCTCGCTTGCCTGTGGT CGGCCTGTTCTTCAGGTAGTGGATATTGGATGCGTTGGTGACATTACTGC CGTTAACACAAAGGTAAGCCAATGGGTTGAAGGCATGGCCTTGTTGCGGT CAGATTGGCTGTCCTTTTAGACAGGCAGGACCTTGTGCCCGTCGCCGTGA CTCATTGATATAAGTGTCAGTTCTGCAGTGGGCTTGGTGTTGGCATGTAG CGAACCATCAATATTGTTGGTCGTAAGCACAAATGGAAAATATCGGTACA AAATTGGGGTGCCTCACAATGATTATGATTGACGCGCCTACTCTTTGTCC TCATTTTAGAGATGCAACCAATCTCGTCGGACACCTTACTCCATCACCGC AGGTAATCGAGGATCTCGTGAGCTCAGGCATCGTACCAATCATCGCTCCT ATCGGGGTGGACGAGTCGGGGCAGACGTACAACTGCAACGCCGACACGGC TGCGGGGGCTATCGCGGGGGCGTTAAAGGCACACCGACTGTTGCTTTTGA CCGACGTCGCGGGGGTGTTGAATAAGGAGAAAGAACTACTCCAACAAATG GACTCGGTGAAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19394:747..2961+

>mRNA_Ecto-sp13_S_contig19394.6218.1 ID=mRNA_Ecto-sp13_S_contig19394.6218.1|Name=mRNA_Ecto-sp13_S_contig19394.6218.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=690bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19394:747..2961+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCGCGGGGGTCTTATCGGACGCTCTTCCCTTCATACAAGCCCACGC
AGACAGAACCATTGTCATCAAGTACGGGGGACATGCTATGGAAGACGAAG
AGGCGTCTCTCTCGTTCGCCCGGGACGTGGTCATGCTCAAGCAGTGTGGT
GTTAACCCTGTCGTCGTGCATGGGGGAGGCCCGCAGATCGCCGCAATGCT
CAAGAGGCTAGATATCCCTACGTCGTTCGTTGAGGGAGTGCGAGTGTCTG
ACCCCGCCACGGTAGAAATAGCGGAGATGGTTCTTTGCGGTAGCATCAAC
AAGGGGATCGCGAGCAGCATCAAGCGCGCTGGTGGGCGAGCAGTAGGCTT
GAGTGGAAAGGATGACAACCTGCTGATAGCCAAGAAGCTGGGGAAGAAGA
TTGTGGACGAAGAAACCGGAGAAGTCAAGGTAGTGGATATTGGATGCGTT
GGTGACATTACTGCCGTTAACACAAAGGTAATCGAGGATCTCGTGAGCTC
AGGCATCGTACCAATCATCGCTCCTATCGGGGTGGACGAGTCGGGGCAGA
CGTACAACTGCAACGCCGACACGGCTGCGGGGGCTATCGCGGGGGCGTTA
AAGGCACACCGACTGTTGCTTTTGACCGACGTCGCGGGGGTGTTGAATAA
GGAGAAAGAACTACTCCAACAAATGGACTCGGTGAAGGTG
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