mRNA_Ecto-sp13_S_contig19394.6218.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: D8LH55_ECTSI (Acetylglutamate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH55_ECTSI) HSP 1 Score: 439 bits (1129), Expect = 2.170e-153 Identity = 232/236 (98.31%), Postives = 235/236 (99.58%), Query Frame = 1
Query: 1 DLEQNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMDSVKV 708
DLE+NSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFA+DVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNT+VIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELL QMDSVKV
Sbjct: 64 DLERNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFAQDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTEVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLPQMDSVKV 299
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A836CGP3_9STRA (Acetylglutamate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGP3_9STRA) HSP 1 Score: 323 bits (829), Expect = 3.580e-108 Identity = 167/232 (71.98%), Postives = 196/232 (84.48%), Query Frame = 1
Query: 13 NSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMDSVKV 708
N A VLSDALP+I H TIVIKYGGHAMED ASL FA+DVV+LK CGVNPV+VHGGGPQIAAML RL+I TSFVEG+RV+D TV++AEMVLCG INKGIASSIK+AGGRA+GLSGKDDNL++A KL K I D TG K++D+G VG+I VNTK+I DLV++GI+P+IAPIGVDE GQTYNCNADTAAGAIAGALKA+RLLLLTDV GVL+KE EL +++ + +V
Sbjct: 44 NQAVAEVLSDALPYIMEHTGETIVIKYGGHAMEDAAASLQFAKDVVLLKSCGVNPVIVHGGGPQIAAMLGRLNIETSFVEGLRVTDTDTVDVAEMVLCGKINKGIASSIKQAGGRAIGLSGKDDNLILADKLQKVITDPGTGISKMLDLGYVGEIKKVNTKIISDLVAAGIIPVIAPIGVDERGQTYNCNADTAAGAIAGALKANRLLLLTDVKGVLSKEGELFEELTTERV 275
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A2W2ALU6_9HYPH (Acetylglutamate kinase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2ALU6_9HYPH) HSP 1 Score: 264 bits (674), Expect = 3.460e-85 Identity = 132/230 (57.39%), Postives = 181/230 (78.70%), Query Frame = 1
Query: 4 LEQNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
+++ + TA +LS+ALPF+Q + D+ IV+KYGGHAM D + + FARD+VMLK CG+NP+VVHGGGPQI ML +L++ F EG+RV+D AT+ + EMVL GSINK I +SI++AGGRAVG+SGKD NL+IA+KL KK D ETG+V +D G VG+ VNT+++E ++ S +P+IAP+GV +G+T+N NADTAAGA+A A +A RLLLLTDVAGVL+K+K L+ ++
Sbjct: 1 MDEIAATARILSEALPFLQRYDDQIIVVKYGGHAMVDPKLAHQFARDMVMLKVCGLNPIVVHGGGPQINKMLDKLEVQPEFREGLRVTDEATMSVVEMVLSGSINKSIVASIQQAGGRAVGISGKDGNLMIAEKLTKKKTDPETGKVVEIDFGFVGEPVKVNTEILETIMKSDAIPVIAPVGVGANGETFNVNADTAAGAVATATRAKRLLLLTDVAGVLDKDKNLISEL 230
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A848W655_9PROT (Acetylglutamate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W655_9PROT) HSP 1 Score: 263 bits (671), Expect = 9.840e-85 Identity = 134/224 (59.82%), Postives = 177/224 (79.02%), Query Frame = 1
Query: 25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMD 696
AGVLS+ALPF++ HA +T VIKYGGHAM DE + SFARDVV++KQ G+NPVVVHGGGPQI AML+RL I + FV+G+RV+D TVEI EMVL GSINK IA++I AGGRAVG+SGKD NL+ A+K+ + + ++ K++D+G VG+ T V+ ++ DL S ++P+IAP+G G+TYN NADTAAGAIAGAL+A RLL+LTDVAGVL+++ +L+ M+
Sbjct: 10 AGVLSEALPFMRRHAGKTFVIKYGGHAMGDENLAASFARDVVLMKQIGINPVVVHGGGPQIGAMLERLKIKSEFVDGLRVTDRETVEIVEMVLSGSINKAIAAAINTAGGRAVGISGKDGNLIQARKVRRTRTESDSNIEKILDLGFVGEPTEVDPSLLSDLAQSDLIPVIAPLGTGSDGETYNINADTAAGAIAGALEAARLLMLTDVAGVLDRDGKLIPDMN 233
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: UPI0018C6A9BE (acetylglutamate kinase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C6A9BE) HSP 1 Score: 261 bits (666), Expect = 6.000e-84 Identity = 135/226 (59.73%), Postives = 177/226 (78.32%), Query Frame = 1
Query: 16 SMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
S TA +LS+ALPF+Q + D+ IV+K+GGHAM DE+ +L FARD+VMLK CG+NPVVVHGGGPQI ML +L + F EG+RV+D AT+EI EMVL GSINK I +SI++AGGRAVG+SGKD NLLIA++ K+ D TG + VD G VG+ + VNT++I ++ S +P+IAP+G+ G TYN NADTAAGAIA AL A RLL+LTDVAGVL+K+K+L++++
Sbjct: 7 SETARILSEALPFLQLYDDQVIVVKFGGHAMVDEKLALQFARDMVMLKVCGLNPVVVHGGGPQINRMLDKLAVKPEFREGLRVTDDATMEIVEMVLSGSINKSIVASIQQAGGRAVGISGKDGNLLIAERYTKEKKDPATGAITRVDFGQVGEPSRVNTEIIHTIMKSDAIPVIAPVGIGWDGGTYNVNADTAAGAIASALSAKRLLMLTDVAGVLDKQKQLIREL 232
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A081BB81_9HYPH (Acetylglutamate kinase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BB81_9HYPH) HSP 1 Score: 261 bits (666), Expect = 7.270e-84 Identity = 131/223 (58.74%), Postives = 175/223 (78.48%), Query Frame = 1
Query: 25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
A +LS+ALP++Q + RT+V+KYGGHAM D + FARD+V+LKQ GVNP+VVHGGGPQI +MLKRL+I + F G+R++D +TVEI EMVL GSINK I ++ +AGGRAVGL GKD NL++A+KL KI D E+ K++D+G VG+ VN ++++ +++S I+P+IAPIGV E G TYN NADTAAGAIAGA+ A RLLLLTDV GVL K+ +L+Q++
Sbjct: 20 ARILSEALPYMQRYDKRTVVVKYGGHAMGDAGLAAKFARDIVLLKQAGVNPIVVHGGGPQIGSMLKRLNIESEFASGLRITDKSTVEIVEMVLAGSINKQIVGALNQAGGRAVGLCGKDGNLIVARKLEHKIHDPESNIEKLLDLGFVGEPHRVNPEILQTIIASDIIPVIAPIGVSEEGDTYNINADTAAGAIAGAMNAKRLLLLTDVRGVLGKDGKLIQRL 242
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A3N5H450_9HYPH (Acetylglutamate kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5H450_9HYPH) HSP 1 Score: 259 bits (661), Expect = 3.430e-83 Identity = 130/224 (58.04%), Postives = 174/224 (77.68%), Query Frame = 1
Query: 22 TAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
TA +LS+ALPF+Q + D+ IV+KYGGHAM D + + FARD+VMLK CG+NP+VVHGGGPQI ML +LD+ F +G+RV+D T+ + EMVL GSINK I SSI++AGGRAVG+SGKD NL+IA++L KK D TGE +D G VG+ VNT+++E ++ S +P+IAP+GV +G ++N NADTAAGAIA A +A RLLLLTDVAGVL+K+K+L+ ++
Sbjct: 9 TARILSEALPFLQRYDDKIIVVKYGGHAMIDPKLAQQFARDMVMLKVCGLNPIVVHGGGPQINKMLDKLDVKAEFRDGLRVTDAETMAVVEMVLAGSINKSIVSSIQQAGGRAVGISGKDGNLMIAERLTKKKTDPATGETVEIDFGFVGEPVRVNTEILETIMKSDAIPVIAPVGVGRNGDSFNVNADTAAGAIATATRAKRLLLLTDVAGVLDKDKQLISEL 232
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A6N6VMS0_9HYPH (Acetylglutamate kinase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VMS0_9HYPH) HSP 1 Score: 258 bits (658), Expect = 1.430e-82 Identity = 131/231 (56.71%), Postives = 179/231 (77.49%), Query Frame = 1
Query: 1 DLEQNSMTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
DLE+ A VLS+ALP++Q + RTIV+KYGGHAM DE L FARD+V+LKQ G++P+VVHGGGPQI AML RL I + F G+R++D ATVE+ EMVL GSINK + S + RAGG+AVGL GKD NL++A+K+ +KI D E+ K++D+G VG+ +N ++++ +++S I+P+IAP+GV +G TYN NADTAAGAIAGA+ A RLLLLTDV GVL+K+ L++++
Sbjct: 17 DLER----ANVLSEALPYMQQYDKRTIVVKYGGHAMGDEALGLEFARDIVLLKQSGIDPIVVHGGGPQIGAMLNRLGIKSEFSGGLRITDKATVEVVEMVLAGSINKNLVSLLNRAGGQAVGLCGKDGNLIVARKVEQKIHDPESNIEKILDLGFVGEPAKINPEILKTIIASDIIPVIAPVGVAPNGDTYNINADTAAGAIAGAMGATRLLLLTDVRGVLDKQGNLIEEL 243
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A6N7FDB8_9PROT (Acetylglutamate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FDB8_9PROT) HSP 1 Score: 257 bits (657), Expect = 2.520e-82 Identity = 132/228 (57.89%), Postives = 175/228 (76.75%), Query Frame = 1
Query: 25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQMDSVKV 708
A LS+ALP+++A+A +T VIKYGGHAM D + FARD+V+ KQ G+NP+VVHGGGPQI AML+RL I +SFV+G+RV+D ATVEI EMVLCGSINK I ++I AGG A+G+SGKD NL+ A+KL +K D ++ +VVD+G VGD +N V+ +L S ++P+IAP+G+ G TYN NADTAAGA+AGA+ A RLL+LTDVAGVL+K K L+ +M + +V
Sbjct: 24 AKTLSEALPYMRAYAGKTFVIKYGGHAMGDPALARLFARDIVLFKQVGINPIVVHGGGPQIGAMLERLKIKSSFVDGLRVTDKATVEIVEMVLCGSINKQIVAAIGEAGGTAIGISGKDGNLIEARKLTRKTRDPDSNIERVVDLGFVGDPARINVGVLMELARSNVIPVIAPLGMGPDGTTYNINADTAAGAVAGAVGAERLLMLTDVAGVLDKTKVLIPEMTAAQV 251
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Match: A0A3D5RQI4_9PROT (Acetylglutamate kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A3D5RQI4_9PROT) HSP 1 Score: 256 bits (654), Expect = 4.200e-82 Identity = 130/223 (58.30%), Postives = 175/223 (78.48%), Query Frame = 1
Query: 25 AGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGVNPVVVHGGGPQIAAMLKRLDIPTSFVEGVRVSDPATVEIAEMVLCGSINKGIASSIKRAGGRAVGLSGKDDNLLIAKKLGKKIVDEETGEVKVVDIGCVGDITAVNTKVIEDLVSSGIVPIIAPIGVDESGQTYNCNADTAAGAIAGALKAHRLLLLTDVAGVLNKEKELLQQM 693
AG+L+DALP+++AH+ T+VIKYGGHAM D++ + SFARD+V+LKQ G+NP+VVHGGGPQI AML+RL I +SF++G+RV+D ATVEI EMVL GSINK I S+I +AGG AVG+SGKD NL+ A+KL + D + K++D+G VG+ + +N ++ S I+P+IAPIGV G+T+N NADT AGAIAGA A RLL+LTDVAGVL+ E +L+++M
Sbjct: 16 AGILADALPYMRAHSGETVVIKYGGHAMGDDKVADSFARDIVLLKQVGINPIVVHGGGPQIGAMLERLKIQSSFIDGLRVTDAATVEIVEMVLSGSINKQIVSAINKAGGSAVGMSGKDGNLIRARKLRRSKRDPGSNIEKLLDLGFVGEPSEINPHILNTFEESDIIPVIAPIGVGSKGETFNINADTVAGAIAGAADASRLLMLTDVAGVLDDEGQLIKEM 238 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19394.6218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19394.6218.1 >prot_Ecto-sp13_S_contig19394.6218.1 ID=prot_Ecto-sp13_S_contig19394.6218.1|Name=mRNA_Ecto-sp13_S_contig19394.6218.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp MTAGVLSDALPFIQAHADRTIVIKYGGHAMEDEEASLSFARDVVMLKQCGback to top mRNA from alignment at Ecto-sp13_S_contig19394:747..2961+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19394.6218.1 ID=mRNA_Ecto-sp13_S_contig19394.6218.1|Name=mRNA_Ecto-sp13_S_contig19394.6218.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2215bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19394:747..2961+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19394:747..2961+ >mRNA_Ecto-sp13_S_contig19394.6218.1 ID=mRNA_Ecto-sp13_S_contig19394.6218.1|Name=mRNA_Ecto-sp13_S_contig19394.6218.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=690bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19394:747..2961+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |