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Homology
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: D7FR52_ECTSI (Myosin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR52_ECTSI) HSP 1 Score: 768 bits (1982), Expect = 3.060e-268 Identity = 436/455 (95.82%), Postives = 437/455 (96.04%), Query Frame = 1
Query: 1 RKGKRVSSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKFVGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMAFYERRSSRKIIRHWRARRARIRKAEAEAXXXXXXXXXXXXRQESALRVTVDDDEDDRSSDAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GQASPSDARVGANLSAPRTEPFTKATMRAFLNQPVEPQTGVIECMIRRKKGVMSTIYQAYYEPSMKLLMTAKKDKGRYIIAMNPEYMKKGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPERKEIAAVSIDLTRHDDFQGPRKLEVLVADSDDDLVDHASLLNSFGNDNTNIITPVPRMHSIKPEWDED 1359
RKGKRVSSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKFVGVNVSHPEFIKRYGRLGPRELTASGRP DAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMAFYERRSSRKIIRHWRARRARIRKAE XXXXXXXXXXXX ESALRVTVD+DEDDRSSDAAP XXXXXXXXXXXXXXXXXXXX GQASPSDARVGANLSAPRTEPFTKATMRAFLNQPVEPQTGVIECMIRRKKGVMSTIYQAYYEPSMKLLMTAKKDKGRYIIAMNPEYMKKGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPERKEIAAVSIDLTRHDDFQGPRKLEVLVADSDDDLVDHASLLNSFGNDNTNIITPVPRMHSIKPEWDED
Sbjct: 585 RKGKRVSSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKFVGVNVSHPEFIKRYGRLGPRELTASGRPADAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMAFYERRSSRKIIRHWRARRARIRKAEXXXXXXXXXXXXXXXXXESALRVTVDEDEDDRSSDAAPVSPIRAEMDDXXXXXXXXXXXXXXXXXXXXQGGQASPSDARVGANLSAPRTEPFTKATMRAFLNQPVEPQTGVIECMIRRKKGVMSTIYQAYYEPSMKLLMTAKKDKGRYIIAMNPEYMKKGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPERKEIAAVSIDLTRHDDFQGPRKLEVLVADSDDDLVDHASLLNSFGNDNTNIITPVPRMHSIKPEWDED 1039
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: A0A2P6U4H5_CHLSO (Myosin-1-like isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U4H5_CHLSO) HSP 1 Score: 70.9 bits (172), Expect = 2.920e-9 Identity = 47/159 (29.56%), Postives = 82/159 (51.57%), Query Frame = 1
Query: 16 VSSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKF-VGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMA 489
+++ ME GQE +++G RF+ +LRDL++R+ +T + ++ CI+PN + F+ + QL ++E A++ + H EF RY L P EL P S VC ++ H ++++++GRT++F R HLE+V A
Sbjct: 606 LAAEMERGQERRGSQTVGARFRDQLRDLIQRLDATALHFVRCIKPNSQQVAGSFDAPLILHQLRCCGVLEVARIARAGYPTRYLHAEFAARYKHLLP-ELGPGPLPVGV-SVLDVCRQVL-------AHFGVDESQYQIGRTRLFFRAGVLGHLEDVAA 755
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: A0A8J4WUW3_9TREM (Myosin-XV n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4WUW3_9TREM) HSP 1 Score: 70.1 bits (170), Expect = 5.630e-9 Identity = 43/156 (27.56%), Postives = 75/156 (48.08%), Query Frame = 1
Query: 76 FKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKF-VGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMAFYERRSSRKIIRHWRAR 540
F L++L+E++ ++ CI+PNM+ P++FED V QL ++EA ++ K V + F++ YG L +E + EA ++ I + P T +E G ++F+R +LE + + RS+R I + WR R
Sbjct: 437 FNSSLQELMEKMKQNRPHFVRCIKPNMDKQPMVFEDSIVLDQLRYTGVLEATRIRKSGFPVRPDYAAFVRNYGFLLTKEQHQQMLSLGSSVEAARYLLSHISISIGQKGCPSRGTDYEFGHNRLFMRNQLAVNLEAFRSLIQNRSARIIQQAWRRR 592
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: E1ZPP4_CHLVA (Myosin motor domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZPP4_CHLVA) HSP 1 Score: 68.2 bits (165), Expect = 1.850e-8 Identity = 53/180 (29.44%), Postives = 87/180 (48.33%), Query Frame = 1
Query: 13 RVSSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKF-VGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMAFYERRSSRKIIRHWRARRAR 549
R+++ ME GQE +++G RF+ +LRDL++R+ +T + ++ CI+PN + F V QL ++E A++ + H EF RY L P PG + + VC +L H +++ +GRT++F R LE+ A +R S+ I WR R R
Sbjct: 534 RLAAEMERGQERRGSQTVGARFRDQLRDLIQRLDATALHFVRCIKPNSQQVAGAFGAPLVLHQLRCCGVLEVARIARAGYPTRHLHHEFAARYKVLLPELGPGPLPPGISALD--VCRQLL-------AHFDVDASQYRIGRTRLFFRAGMLGQLEDAAARMQR-SALCIQSTWRMARCR 703
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: A0A2P6VGR0_9CHLO (Myosin-1-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGR0_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 6.320e-8 Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 16 VSSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKF-VGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMAFYERRSSRKIIRHWR---ARRARIR 555
++ ++ GQE +++G RF+ +LRDLV R+ ST + ++ CI+PN + FE + QL ++E A++ + H +F +RY L P PG E VC +L D + +++ +GRT++F R LE+ A +R S+ I WR RRA +R
Sbjct: 610 LAGELQRGQEKRGSQTLGARFREQLRDLVARLDSTSLHFVRCIKPNGGQEAGRFETPLILHQLRCCGVLEVARIAQAGYPTRYLHADFAQRYFVLLPGGGAGPLPPGADCLE--VCHQLLDHFRLE-------ASQYRIGRTRLFFRAGVLGQLEDAAARMQR-SALLIESTWRMAVCRRAFLR 783
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: A0A7S0XDB5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDB5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.420e-7 Identity = 48/167 (28.74%), Postives = 82/167 (49.10%), Query Frame = 1
Query: 787 DARVGANLSAP-----RTEPFTKATMRAFLNQPVEPQTGVIECMIRRKKGVMST---IYQAYYEPSMKLLMTAKK----DKGRYIIAMNPEYMKKGEPSTLGKVKAVAQRRQYIVYDNGFKANKTLPEKYTIKPERKEIAAVSIDLTRHDDFQGPRKLEVLVADSDD 1251
D+ + N+ AP + P + M+ FL PV GV++C IRR KGV S +Y Y + + LMT+KK Y+I+M + + + LGK+++ ++ VYDNG ++ ++ RKE+A++ +GPRK++V + D+
Sbjct: 318 DSNITVNVPAPLDPPQQVTPLNLSNMKHFLTSPVPRTAGVVQCYIRRIKGVSSMFPPVYNLYLKDGDRFLMTSKKRPNNKTSNYLISMAENDLNRESGNYLGKLRSNFVGTEFQVYDNGVSPKESATAGDSVI--RKELASIMYAANLLGS-RGPRKMQVCIPTVDE 481
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: L1ITH2_GUITC (Myosin n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ITH2_GUITC) HSP 1 Score: 65.1 bits (157), Expect = 1.910e-7 Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 37 GQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKF-VGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEE 480
G+ + ES+ +FK +L DL+ RI++ + ++ CI PN + P L E E + QL + ++EA +V + V + H +FI RY L +P + + + ++ + I S F VG TK+F+R A HE +EE
Sbjct: 642 GRSTIIFESVTMQFKRQLGDLMARINAAQPHFVRCINPNSQKMPKLIEPEMILDQLRCSGLMEAVRVSRAGFPVRILHEDFIYRYSILV--------QPINISEDRLNVIEMIRQMKI-------SIENFRVGLTKVFLRRAVHERMEE 775
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: UPI00142560F5 (unconventional myosin-XIX-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142560F5) HSP 1 Score: 64.3 bits (155), Expect = 3.210e-7 Identity = 48/170 (28.24%), Postives = 81/170 (47.65%), Query Frame = 1
Query: 73 RFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVY-KFVGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAV--VCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEVMAFYERRSSRKIIRHWRARRARIRKAEAEA 573
+FK L L+ +H T YI CI+P+ + +P F++ +V QL + ++E Q+ + + + EF+KRY EL G D + C + D + D + + K+ G+TKIF+R + +HLE S+ +I R+WR A R+ + A
Sbjct: 665 KFKTSLDSLMSTLHQTTPHYIRCIKPSFKCEPNHFDNIHVINQLRACGVLETVQISSRGFPTRMLYSEFLKRY------ELLLQGCKEDVTGFDIRNKCAIVTDKVFGEDDKENNEKSLL-FGKTKIFLREGQLDHLEVARLRAVNLSACRIQRYWRKFLATRRRQQTAA 827
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: A0A445HTM3_GLYSO (Myosin-2 isoform B n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445HTM3_GLYSO) HSP 1 Score: 63.9 bits (154), Expect = 4.090e-7 Identity = 43/155 (27.74%), Postives = 85/155 (54.84%), Query Frame = 1
Query: 19 SSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKF-VGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEE 480
S+ + GG +++S+G +FKG+L L+ ++ +T +I CI+PN + P +++++ V QQL ++E ++ + ++H EF +RYG L L+ + D+ S +V A+L + P+ ++VG TK+++R + LE+
Sbjct: 715 SNSLYGGSLDSQKQSVGTKFKGQLFKLMHQLETTTPHFIRCIKPNTKQQPGVYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFL----LSEANTSQDSLSISV-------AVLQQFNIPPEM---YQVGFTKLYLRTGQIGALED 855
BLAST of mRNA_Ecto-sp13_S_contig19362.6208.1 vs. uniprot
Match: A0A2G5CCQ9_AQUCA (Uncharacterized protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CCQ9_AQUCA) HSP 1 Score: 63.9 bits (154), Expect = 4.420e-7 Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 1
Query: 10 KRVSSVMEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLFEDEYVTQQLLSASIVEAAQVYKF-VGVNVSHPEFIKRYGRLGPRELTASGRPGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLEEV 483
K VSS+ G +++S+ +FKG+L L++R+ +T +I CI+PN + P ++E++ V QQL ++E ++ + ++H +F RYG L L + R D S +V A+L + PD ++VG TKIF R + LE+
Sbjct: 729 KPVSSLFRLGD--FQKKSVAAKFKGQLFKLMQRLENTTPHFIRCIKPNSKQQPGMYENDLVLQQLRCCGVLEVVRISRSGFPTRLTHQQFAGRYGFL----LLENVRLHDPLSISV-------AILQQCNIHPDM---YQVGYTKIFFRTGQIAVLEDA 871
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 1 |
| Seed ortholog score | 752.3 |
| Seed ortholog evalue | 1.3e-214 |
| Seed eggNOG ortholog | 2880.D7FR52 |
| Preferred name | MYO19 |
| Model size | 1359 |
| KEGG ko | ko:K10352,ko:K10356,ko:K10357,ko:K22366 |
| KEGG Pathway | ko04530,map04530 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000001,GO:0000003,GO:0000011,GO:0000131,GO:0000132,GO:0000146,GO:0000149,GO:0000166,GO:0000226,GO:0000278,GO:0000281,GO:0000302,GO:0000331,GO:0000902,GO:0000904,GO:0000910,GO:0000912,GO:0000915,GO:0001101,GO:0001558,GO:0001654,GO:0001676,GO:0001726,GO:0001745,GO:0001750,GO:0001751,GO:0001754,GO:0001891,GO:0001931,GO:0001942,GO:0002250,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0002790,GO:0003006,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005102,GO:0005488,GO:0005509,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005546,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005773,GO:0005794,GO:0005826,GO:0005829,GO:0005856,GO:0005882,GO:0005884,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0005938,GO:0006082,GO:0006403,GO:0006582,GO:0006629,GO:0006631,GO:0006633,GO:0006725,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006897,GO:0006904,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006970,GO:0006971,GO:0006979,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0007029,GO:0007030,GO:0007031,GO:0007033,GO:0007049,GO:0007097,GO:0007107,GO:0007114,GO:0007117,GO:0007118,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007272,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007317,GO:0007349,GO:0007399,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007584,GO:0007600,GO:0007601,GO:0007610,GO:0007626,GO:0008021,GO:0008064,GO:0008088,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0008298,GO:0008360,GO:0008361,GO:0008366,GO:0008544,GO:0008610,GO:0009058,GO:0009267,GO:0009306,GO:0009506,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009826,GO:0009856,GO:0009860,GO:0009887,GO:0009888,GO:0009908,GO:0009914,GO:0009932,GO:0009966,GO:0009987,GO:0009991,GO:0010015,GO:0010026,GO:0010033,GO:0010035,GO:0010053,GO:0010054,GO:0010090,GO:0010091,GO:0010154,GO:0010243,GO:0010256,GO:0010522,GO:0010564,GO:0010639,GO:0010646,GO:0010720,GO:0010769,GO:0010770,GO:0010817,GO:0010821,GO:0010959,GO:0010970,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0014910,GO:0014911,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016028,GO:0016043,GO:0016049,GO:0016050,GO:0016053,GO:0016192,GO:0016197,GO:0016358,GO:0016459,GO:0016460,GO:0016461,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017022,GO:0017075,GO:0017076,GO:0017111,GO:0017137,GO:0017157,GO:0018958,GO:0019438,GO:0019748,GO:0019752,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019905,GO:0019953,GO:0019954,GO:0021700,GO:0022008,GO:0022402,GO:0022404,GO:0022405,GO:0022406,GO:0022412,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022622,GO:0022898,GO:0023051,GO:0023052,GO:0023061,GO:0030010,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030038,GO:0030046,GO:0030048,GO:0030050,GO:0030054,GO:0030072,GO:0030073,GO:0030104,GO:0030133,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030182,GO:0030307,GO:0030318,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030479,GO:0030516,GO:0030554,GO:0030587,GO:0030659,GO:0030705,GO:0030832,GO:0030833,GO:0030837,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030898,GO:0030899,GO:0031032,GO:0031033,GO:0031034,GO:0031090,GO:0031097,GO:0031152,GO:0031154,GO:0031175,GO:0031252,GO:0031254,GO:0031256,GO:0031267,GO:0031268,GO:0031270,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031475,GO:0031585,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031941,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0031987,GO:0032009,GO:0032027,GO:0032060,GO:0032153,GO:0032155,GO:0032252,GO:0032271,GO:0032272,GO:0032400,GO:0032401,GO:0032402,GO:0032409,GO:0032412,GO:0032432,GO:0032433,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032506,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032593,GO:0032787,GO:0032796,GO:0032868,GO:0032869,GO:0032870,GO:0032878,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032982,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033267,GO:0033275,GO:0033298,GO:0033365,GO:0033554,GO:0034461,GO:0034613,GO:0034622,GO:0034642,GO:0034643,GO:0034762,GO:0034765,GO:0035091,GO:0035254,GO:0035255,GO:0035618,GO:0035619,GO:0035639,GO:0035690,GO:0035838,GO:0036094,GO:0036477,GO:0038093,GO:0038094,GO:0038096,GO:0040001,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0040019,GO:0042051,GO:0042052,GO:0042221,GO:0042303,GO:0042330,GO:0042438,GO:0042440,GO:0042461,GO:0042462,GO:0042470,GO:0042476,GO:0042493,GO:0042542,GO:0042552,GO:0042592,GO:0042594,GO:0042623,GO:0042633,GO:0042641,GO:0042642,GO:0042759,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043008,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043197,GO:0043200,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043325,GO:0043332,GO:0043434,GO:0043436,GO:0043473,GO:0043531,GO:0043588,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044297,GO:0044309,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044550,GO:0044703,GO:0044706,GO:0044764,GO:0044837,GO:0044877,GO:0045033,GO:0045111,GO:0045165,GO:0045177,GO:0045179,GO:0045184,GO:0045202,GO:0045335,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045773,GO:0045856,GO:0045921,GO:0045927,GO:0045995,GO:0046148,GO:0046189,GO:0046394,GO:0046530,GO:0046677,GO:0046683,GO:0046847,GO:0046872,GO:0046879,GO:0046903,GO:0046907,GO:0046982,GO:0046983,GO:0047497,GO:0048066,GO:0048193,GO:0048232,GO:0048278,GO:0048306,GO:0048308,GO:0048309,GO:0048311,GO:0048313,GO:0048364,GO:0048366,GO:0048367,GO:0048438,GO:0048467,GO:0048468,GO:0048469,GO:0048471,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048592,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048764,GO:0048765,GO:0048767,GO:0048768,GO:0048770,GO:0048812,GO:0048813,GO:0048814,GO:0048820,GO:0048827,GO:0048856,GO:0048858,GO:0048868,GO:0048869,GO:0048870,GO:0048871,GO:0048878,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050808,GO:0050848,GO:0050877,GO:0050878,GO:0050891,GO:0050896,GO:0050900,GO:0050931,GO:0050953,GO:0050982,GO:0051015,GO:0051017,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051270,GO:0051272,GO:0051279,GO:0051282,GO:0051285,GO:0051286,GO:0051293,GO:0051294,GO:0051301,GO:0051302,GO:0051493,GO:0051494,GO:0051591,GO:0051606,GO:0051640,GO:0051641,GO:0051643,GO:0051645,GO:0051646,GO:0051647,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051654,GO:0051656,GO:0051674,GO:0051686,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0051924,GO:0051960,GO:0051962,GO:0055037,GO:0055044,GO:0060001,GO:0060002,GO:0060151,GO:0060281,GO:0060282,GO:0060284,GO:0060327,GO:0060328,GO:0060341,GO:0060429,GO:0060560,GO:0060627,GO:0060996,GO:0060997,GO:0061024,GO:0061387,GO:0061458,GO:0061572,GO:0061573,GO:0061640,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070382,GO:0070648,GO:0070649,GO:0070650,GO:0070727,GO:0070887,GO:0070938,GO:0071229,GO:0071230,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071496,GO:0071520,GO:0071563,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071889,GO:0071944,GO:0071963,GO:0071976,GO:0072330,GO:0072384,GO:0072657,GO:0072659,GO:0072676,GO:0072678,GO:0072697,GO:0080147,GO:0090066,GO:0090140,GO:0090426,GO:0090436,GO:0090558,GO:0090567,GO:0090596,GO:0090626,GO:0090627,GO:0090702,GO:0090726,GO:0097061,GO:0097159,GO:0097204,GO:0097367,GO:0097435,GO:0097447,GO:0097458,GO:0097518,GO:0097574,GO:0097575,GO:0097708,GO:0097718,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098773,GO:0098793,GO:0098794,GO:0098805,GO:0098840,GO:0098858,GO:0098862,GO:0098916,GO:0099080,GO:0099081,GO:0099089,GO:0099111,GO:0099118,GO:0099120,GO:0099173,GO:0099402,GO:0099503,GO:0099512,GO:0099513,GO:0099515,GO:0099518,GO:0099536,GO:0099537,GO:0099568,GO:0099640,GO:0099738,GO:0106027,GO:0110009,GO:0110053,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0120104,GO:0120117,GO:0140027,GO:0140029,GO:0140056,GO:0150034,GO:1900006,GO:1900076,GO:1900078,GO:1901019,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901981,GO:1902407,GO:1902410,GO:1902531,GO:1902716,GO:1902850,GO:1902875,GO:1902877,GO:1902903,GO:1902904,GO:1902936,GO:1903047,GO:1903076,GO:1903078,GO:1903119,GO:1903169,GO:1903260,GO:1903429,GO:1903431,GO:1903475,GO:1903478,GO:1903479,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903827,GO:1903829,GO:1904062,GO:1904375,GO:1904377,GO:1904580,GO:1904582,GO:1904601,GO:1904752,GO:1904754,GO:1905392,GO:1905429,GO:1905430,GO:1905475,GO:1905477,GO:1905879,GO:1905881,GO:1990151,GO:1990753,GO:1990778,GO:1990819,GO:1990896,GO:1990904,GO:2000026,GO:2000145,GO:2000147,GO:2000241,GO:2000243,GO:2000689,GO:2000769,GO:2001257 |
| Exons | 8 |
| EggNOG free text desc. | translation initiation factor activity |
| EggNOG OGs | COG5022@1,KOG0160@2759,KOG2502@1,KOG2502@2759 |
| Cds size | 1332 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01009,ko03019,ko03029,ko03036,ko04131,ko04147,ko04812 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462983.7322948-CDS-Ecto-sp13_S_contig19362:13..145 | 1681462983.7322948-CDS-Ecto-sp13_S_contig19362:13..145 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 14..145 - |
| 1681462983.7518668-CDS-Ecto-sp13_S_contig19362:366..466 | 1681462983.7518668-CDS-Ecto-sp13_S_contig19362:366..466 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 367..466 - |
| 1681462983.7626715-CDS-Ecto-sp13_S_contig19362:729..902 | 1681462983.7626715-CDS-Ecto-sp13_S_contig19362:729..902 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 730..902 - |
| 1681462983.773174-CDS-Ecto-sp13_S_contig19362:1112..1254 | 1681462983.773174-CDS-Ecto-sp13_S_contig19362:1112..1254 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 1113..1254 - |
| 1681462983.7832282-CDS-Ecto-sp13_S_contig19362:1404..1764 | 1681462983.7832282-CDS-Ecto-sp13_S_contig19362:1404..1764 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 1405..1764 - |
| 1681462983.7937617-CDS-Ecto-sp13_S_contig19362:2155..2373 | 1681462983.7937617-CDS-Ecto-sp13_S_contig19362:2155..2373 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 2156..2373 - |
| 1681462983.804633-CDS-Ecto-sp13_S_contig19362:2777..2888 | 1681462983.804633-CDS-Ecto-sp13_S_contig19362:2777..2888 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 2778..2888 - |
| 1681462983.8196955-CDS-Ecto-sp13_S_contig19362:3103..3199 | 1681462983.8196955-CDS-Ecto-sp13_S_contig19362:3103..3199 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig19362 3104..3199 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462983.8415303-UTR-Ecto-sp13_S_contig19362:3199..3226 | 1681462983.8415303-UTR-Ecto-sp13_S_contig19362:3199..3226 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig19362 3200..3226 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19362.6208.1 >prot_Ecto-sp13_S_contig19362.6208.1 ID=prot_Ecto-sp13_S_contig19362.6208.1|Name=mRNA_Ecto-sp13_S_contig19362.6208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=444bp
MEGGQEVLKRESMGRRFKGELRDLVERIHSTEVQYILCIRPNMENDPVLF EDEYVTQQLLSASIVEAAQVYKFVGVNVSHPEFIKRYGRLGPRELTASGR PGDAESEAVVCTKLADALLIRDRHDPDSKTKFEVGRTKIFIRGAEHEHLE EVMAFYERRSSRKIIRHWRARRARIRKAEAEAARRERAAAREKARQESAL RVTVDDDEDDRSSDAAPVSPIRAEMDEEEEEDEEEDEEEEDLSDGQGGQA SPSDARVGANLSAPRTEPFTKATMRAFLNQPVEPQTGVIECMIRRKKGVM STIYQAYYEPSMKLLMTAKKDKGRYIIAMNPEYMKKGEPSTLGKVKAVAQ RRQYIVYDNGFKANKTLPEKYTIKPERKEIAAVSIDLTRHDDFQGPRKLE VLVADSDDDLVDHASLLNSFGNDNTNIITPVPRMHSIKPEWDED back to topmRNA from alignment at Ecto-sp13_S_contig19362:14..3226- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig19362.6208.1 ID=mRNA_Ecto-sp13_S_contig19362.6208.1|Name=mRNA_Ecto-sp13_S_contig19362.6208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19362:14..3226- (Ectocarpus species13 EcNAP12_S_4_19m) CGTAAGGGAAAGCGCGTGTCTTCTGTCATGGAAGGGGGGCAGGAAGTCTT
GAAGCGGGAGAGCATGGGACGGCGCTTCAAGGGCGAGCTTAGGGATTTGG
TGGAGCGAATCCACTCCACTGAGGTACGCCACAGTTGGTACCGGATGGAA
TGGCCGACGTCTCAGCAAAGCCCGTACGAAAGCATGGGTCCCAGACGTCA
GTCACCACGAGAAGCGGTGTTGTTGTACGGTCACTTGATCTCGGTTATTC
CATTCGGTACCGCCACCGATGGTCTAGGTACCGCAGCAGTGCTGCGGGAC
ACGACTTACCCTTGCAAGTGGTTTTTGTGGTGTCACAGGTGCAGTACATT
CTGTGTATTCGGCCCAACATGGAGAACGACCCGGTGTTGTTCGAGGACGA
ATATGTGACTCAGCAACTGCTGTCCGCCAGCATCGTTGAGGCTGCGCAGG
TATGAACGTGCATTTGTTCTTGATTGCTTAGACTAGTGGCTTTCCGGAAT
AAAATCTGCAGACCGTAGTTGTTCGAACTTACGACAGAGCATCCATGAGT
TATCCTCGTGTGAGCATAGCTTATCATACCCTGGCTACATTGCACACAGC
AGTCGTGCAGCATGCGAATATCAGGCACTGTGGAAGTGTCGCAACGGCAA
GGTTTCGGGGTGTATCGCGTTGGCGATGAACAGCGTTCGGGAAGAGCAAC
ACTTTGATGTTGTCTTTTGTCACGGTCGCAGAAGTTGCTGTGCTGTAGCT
GCAGCATGGTTTCATGGACAATTTCACGATATTCGTTGGCTTGCGTTAAT
CCGGTGGCTCTTGTGGCTCCGCATGCGAACCCGTGAATCTCGTGCGATTG
AAGGTGTACAAGTTCGTAGGGGTGAATGTGTCCCATCCTGAGTTCATCAA
GAGGTATGGAAGACTCGGTCCGCGAGAGTTGACCGCATCGGGTCGCCCCG
GAGACGCGGAAAGCGAAGCCGTTGTGTGCACGAAGTTGGCAGATGCTTTG
CTGATTCGCGACCGCCACGACCCAGACTCCAAGACGAAGTTCGAGGTTGG
AAGGACCAAGATCTTCATCAGGTGTGTGGGTGTGCGTTTGGGTGTGCCTG
TGCACAGTGGTGCATCGTCCGTCGAACTTTGGATGAGCAACATGGGCGTC
CAAAGGACATGGGATTAAGCAGGTGCATGTCTGTCTTCCCATAAAAGCAT
GCTTGCACCCTTGCTGCTTGGAGCTATGTTAGTTCGCAGACGAAAAAAAA
CGGCCAAATCTCCTCATTCACCGAGGGCCGTCCCCCGACTTTCTCGGTGC
AGTTGGTTGGCATTTGCGTATTATACAACATACGGTAGGAAGATCCGCCG
CAACACCCATACAATGTGCATAGCCATTTGAGCTGCGCGCAGAAGTGTTG
ACAGCGCGTCACCGACGTATCGTTGTCTGATTCTGTCTGCCTGAACCGTT
CAAATAAAACAGGGGTGCAGAACACGAGCACCTGGAGGAGGTGATGGCGT
TCTACGAGCGAAGAAGCTCGAGAAAAATCATCCGGCACTGGAGAGCGCGG
CGAGCAAGAATCCGAAAAGCCGAAGCGGAAGCAGCCCGGCGGGAGCGTGC
GGCGGCCAGAGAGAAGGCGCGGCAAGAATCTGCGCTGCGCGTTACGGTAG
ACGATGATGAGGACGACCGCAGCTCGGACGCTGCCCCGGTCTCGCCCATC
CGTGCAGAGATGGACGAGGAGGAGGAGGAGGACGAAGAGGAGGACGAAGA
GGAGGAAGATCTGTCGGACGGGCAAGGGGGGCAGGCGTCGCCCAGCGATG
CGCGAGTTGGCGCGAATCTGAGGTGAGTTGCATCCTCTGCGTGTCGCACG
AACCACGTGGTAGAGTAAATAGAAGTAGCCCCGTTTTTCGTTGGTGGTCG
TGATTGGTCTGTCTCGTTGCGCTGGCTTGATGTGGCTGATATGGGTTTCC
CCCACGTGTGTTTTCGTCACAGTGCTCCTCGAACGGAACCGTTTACCAAG
GCAACGATGCGGGCATTCCTTAACCAGCCGGTGGAGCCTCAGACAGGGGT
AATCGAGTGCATGATCCGCCGCAAGAAGGGTGTCATGAGCACAATCTACC
AGGCGTACTACGAGGTGAGCAGGGGAATGGGCGCGTGTTGCCGGTTTTTG
GCCCATTGTCTCGGGGAGGCTCAGGGCATTTGTCTTGGATTCTAGTCGCT
ACAGGTTGGATTATTAACGGGTGGCTTGTTCTACACACATGCTCGGTTTC
GCCTGGTTGTAAATGCCGCACGCTAAGGCGGAGTCTGAGATATTACTTTT
TCGCCTGAAATGCCTTCGTTGCAGCCCTCAATGAAGCTGCTCATGACGGC
CAAGAAAGACAAGGGCCGCTACATCATCGCCATGAACCCAGAGTACATGA
AGAAAGGAGAGCCCAGTACGCTGGGGAAAGTAAAGGCGGTGGCCCAGCGG
CGACAATACATCGTCTACGACAACGGTTTCAAGGCGAACAAAACTCTGTG
AGTGTGGCTCTTGGTGGCCGAGAAATGCGTCGTTTGACATTTGTGTTTCG
GGCAAATACTCACTCGCAGGCGGCGTTGAAATTCCAAGTGAGCTCCCGTT
CGTTCTCCTGTAGATGTAGAATTATTTACTTATTTATTTTTGTGTCGGGT
GTGGATCGTGCTAGTCTCTCCCCTCCCGGCGAAGTCGCGGGTCTTTTGTA
AACACTCAAGCGGAGCTGATACCCAACCTCAATCACCTCTCGCTTCCGCT
GTGTCGGCAGGCCCGAGAAGTACACGATCAAGCCAGAACGCAAGGAAATT
GCAGCTGTGAGCATCGACCTGACTCGCCACGACGACTTCCAGGGACCGCG
AAAGCTCGAGGTGCGATGCAAGTCACTGAAATGTTGTCGTCCGCGCATCA
TTGTTGGCCCCTCGGGACACCAAAACCCAACCGGGGCCAAAGTCGATAGA
TGACGTACGAGAGCGATCTCTCCGTCAACACGTGATGACATGCGTGCACA
CACGCGTAACCTTGTGCTACTGGATGGAATGTTCCTGTCGTTGTTTTGAA
CATTCACTTTCCGGCGTTGTGTGGTGCGCAGGTGTTGGTGGCGGACAGTG
ATGATGACTTGGTAGACCATGCATCGCTGCTCAACAGCTTCGGCAACGAC
AACACCAACATCATCACCCCGGTACCTCGCATGCACAGCATCAAGCCGGA
ATGGGACGAAGAC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig19362:14..3226- >mRNA_Ecto-sp13_S_contig19362.6208.1 ID=mRNA_Ecto-sp13_S_contig19362.6208.1|Name=mRNA_Ecto-sp13_S_contig19362.6208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1332bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19362:14..3226- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGAAGGGGGGCAGGAAGTCTTGAAGCGGGAGAGCATGGGACGGCGCTT CAAGGGCGAGCTTAGGGATTTGGTGGAGCGAATCCACTCCACTGAGGTGC AGTACATTCTGTGTATTCGGCCCAACATGGAGAACGACCCGGTGTTGTTC GAGGACGAATATGTGACTCAGCAACTGCTGTCCGCCAGCATCGTTGAGGC TGCGCAGGTGTACAAGTTCGTAGGGGTGAATGTGTCCCATCCTGAGTTCA TCAAGAGGTATGGAAGACTCGGTCCGCGAGAGTTGACCGCATCGGGTCGC CCCGGAGACGCGGAAAGCGAAGCCGTTGTGTGCACGAAGTTGGCAGATGC TTTGCTGATTCGCGACCGCCACGACCCAGACTCCAAGACGAAGTTCGAGG TTGGAAGGACCAAGATCTTCATCAGGGGTGCAGAACACGAGCACCTGGAG GAGGTGATGGCGTTCTACGAGCGAAGAAGCTCGAGAAAAATCATCCGGCA CTGGAGAGCGCGGCGAGCAAGAATCCGAAAAGCCGAAGCGGAAGCAGCCC GGCGGGAGCGTGCGGCGGCCAGAGAGAAGGCGCGGCAAGAATCTGCGCTG CGCGTTACGGTAGACGATGATGAGGACGACCGCAGCTCGGACGCTGCCCC GGTCTCGCCCATCCGTGCAGAGATGGACGAGGAGGAGGAGGAGGACGAAG AGGAGGACGAAGAGGAGGAAGATCTGTCGGACGGGCAAGGGGGGCAGGCG TCGCCCAGCGATGCGCGAGTTGGCGCGAATCTGAGTGCTCCTCGAACGGA ACCGTTTACCAAGGCAACGATGCGGGCATTCCTTAACCAGCCGGTGGAGC CTCAGACAGGGGTAATCGAGTGCATGATCCGCCGCAAGAAGGGTGTCATG AGCACAATCTACCAGGCGTACTACGAGCCCTCAATGAAGCTGCTCATGAC GGCCAAGAAAGACAAGGGCCGCTACATCATCGCCATGAACCCAGAGTACA TGAAGAAAGGAGAGCCCAGTACGCTGGGGAAAGTAAAGGCGGTGGCCCAG CGGCGACAATACATCGTCTACGACAACGGTTTCAAGGCGAACAAAACTCT GCCCGAGAAGTACACGATCAAGCCAGAACGCAAGGAAATTGCAGCTGTGA GCATCGACCTGACTCGCCACGACGACTTCCAGGGACCGCGAAAGCTCGAG GTGTTGGTGGCGGACAGTGATGATGACTTGGTAGACCATGCATCGCTGCT CAACAGCTTCGGCAACGACAACACCAACATCATCACCCCGGTACCTCGCA TGCACAGCATCAAGCCGGAATGGGACGAAGAC back to top
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