mRNA_Ecto-sp13_S_contig19344.6204.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19344.6204.1
Unique NamemRNA_Ecto-sp13_S_contig19344.6204.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A6H5L8F7_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8F7_9PHAE)

HSP 1 Score: 783 bits (2022), Expect = 1.500e-285
Identity = 381/411 (92.70%), Postives = 391/411 (95.13%), Query Frame = 1
Query:    1 MERNRKAGRGGGPHTALPARERCGAVLPAASPAHHRHPGDSCEREYSETDLAKLSIAPGAKLEDWMSPDSDTGTNKGEITVGENCVVVGVGAGRKNYFRDNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDLAARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSSEHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVFLPIGWFHVVLNVEASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPNSDLDRQEADCGS 1233
            MERNRKAGR GGPHTAL ARERCGAV+P ASPAH RHPGDSCEREYSETDLAKLSIAPGAKLEDW+SPDSDTGTNKGEITVGENCV VG+GAG+KN FRDNVERI GSMFADDVHGDTLPHLPTVLTGFLDEWPAYASRE GKSW+L+DLAARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYS+ ESGKD+APLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLN  G SSEHEG  EDFDLSALEWFCRAGSSD E+PGGRRHLHK AKVIIQRPGEVVFLPIGWFHVVLNV ASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPN D DRQEA+ GS
Sbjct:    1 MERNRKAGRRGGPHTALSARERCGAVVPGASPAH-RHPGDSCEREYSETDLAKLSIAPGAKLEDWVSPDSDTGTNKGEITVGENCVEVGIGAGKKNVFRDNVERIPGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASRETGKSWTLQDLAARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSEKESGKDSAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNFDGNSSEHEG--EDFDLSALEWFCRAGSSDGEDPGGRRHLHKGAKVIIQRPGEVVFLPIGWFHVVLNVTASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPNRDFDRQEAESGS 408          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A1E7FI75_9STRA (Clavaminate synthase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FI75_9STRA)

HSP 1 Score: 339 bits (869), Expect = 3.040e-110
Identity = 175/312 (56.09%), Postives = 210/312 (67.31%), Query Frame = 1
Query:  292 FRDNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAG---KSWSLRDLAARTAGR---------KVSLDGGPSFARMSMCAGSVSLAEYERYSKN-ESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSSEHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVFLPIGWFHVVLNVEA---STALSMSLTLRRDLPSVLPLFLEAEREFA 1179
            FRDNV RI G  F +D+HGD+LPH+P VLTG LD+WP+++    G    SWS+ DLAAR   +         +VSLDGGPSFAR SMC G V+L EY +Y K+ E+  D APLYVFDP IL   + F +      D F  P CFS DA   +   ++RPLPP WLLVG  RSGT IHDHP TV WNALLVGCKLWCC PPDVDES LLLNL  +  + +    DFDLSALEWF + G S N+ P         AK+I+Q PGEVV+LP GWFHVVLNV A   +TA+S+SLTLRRDLP +LPL +E + +FA
Sbjct:   88 FRDNVIRIPGCSFKNDIHGDSLPHVPAVLTGLLDDWPSFSKNPEGTTTSSWSVEDLAAREVTKITTSTPTPPRVSLDGGPSFARQSMCQGKVTLEEYNQYCKSGEADNDVAPLYVFDPDILKSSTGFFES-----DEFSIPGCFSNDAMGCINGTEYRPLPPAWLLVGVKRSGTPIHDHPLTVGWNALLVGCKLWCCLPPDVDESLLLLNLP-QDDDEDFDMTDFDLSALEWFKQCGGSTNKIPD-------CAKIIVQHPGEVVYLPAGWFHVVLNVAADSPTTAISVSLTLRRDLPVILPLLMEEDEDFA 386          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A7S3QEB2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEB2_9STRA)

HSP 1 Score: 320 bits (819), Expect = 3.900e-102
Identity = 193/427 (45.20%), Postives = 232/427 (54.33%), Query Frame = 1
Query:  121 SCE--REYSETDLAKLSIAPGAKLEDWMSPDS-------------------------DTGTNKGEITVGENC--------------VVVGVGAGRKNYFRDNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEW-------------PAYASREAGKSWSLRDLAA------------RTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSKN-ESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNL-----GGKSSEHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVFLPIGWFHVVLNVEASTALSMSLTLRRDLPSVLPLFLEAEREFALW 1185
            +CE  R+ S  D AK SIAP A+L+DW+S  S                         D+      +    +C               V     G +  +RDNV RI G  F  DVHGD+LPH+P VLTG +D+W             PA  S   G                      +TA  +VSLDGGPSFARMSM  G V+L EY+ Y ++ E+ KD APLYVFDP +L  +STF  D     D F  P CFS D  A +   ++RPLPP WLLVG  RSGT IHDHP TVAWNALLVGCKLWCC PPDVDES LLLNL                  FDLSALEWF + G            L +SAK+I+QRPGEVV+LP GWFHVVLNVE STA+S+SL LRRDLP +LPL +E++ +FA +
Sbjct:   10 ACETNRKLSAIDRAKKSIAPRAELKDWLSDSSAVSSAXXXXXXXXXXXXXXXXXXGDDSIQVHSHVDDDVSCHAXXXXXXXXXXXXAVTFDNGGAQLVYRDNVTRIPGCSFTHDVHGDSLPHVPAVLTGLMDDWLAVLRPFSFSNADPAAGSSTGGXXXXXXXXXXXXXXXXGSTSIFKTA--RVSLDGGPSFARMSMGQGKVTLEEYKHYCESGEASKDIAPLYVFDPDVL--KSTFASD----NDEFHVPECFSNDVMACIDGTEYRPLPPAWLLVGVKRSGTPIHDHPLTVAWNALLVGCKLWCCLPPDVDESLLLLNLHDDXXXXXXXXXXXXXXXFDLSALEWFRQCGK-----------LPESAKIIVQRPGEVVYLPAGWFHVVLNVETSTAISVSLALRRDLPVILPLLMESDEDFATF 417          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A813J9B4_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J9B4_POLGL)

HSP 1 Score: 271 bits (692), Expect = 2.490e-84
Identity = 151/321 (47.04%), Postives = 184/321 (57.32%), Query Frame = 1
Query:  292 FRDNVERI---RGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDLAAR-TAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSSEHEGGGEDFDLSALEWF-------CRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVFLPIGWFHVVLNVEASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPNSDLDRQEA 1221
            FRDN ER+    G  F  DV GD LP  P VL G  D W A A    G+ WS+  LA R T G   SLDGGP  AR SM   SVS+ EY RY   +   D APLY+FDP IL   +    +G+++   +  P CFS+D   A+   ++RPLPP WLLVGA RSGT IHDHP   AWN+LL GCKLW  FPPDVDE  LLL+ G          ED+DLSA+EWF         A     E+   +R L    K+I+Q PGE VFLP GW+HVVLN+  STA+S SL LRRD         E +  FA++ R   + ++ EA
Sbjct:   58 FRDNTERVPFVHGETF--DVSGDDLPDKPCVLQGCCDSWHAMAD---GRHWSVESLAERCTEGDVFSLDGGPGLARNSMSEASVSMLEYLRYCSEDGESDDAPLYIFDPCIL---TRAFREGTMLSSEYTVPHCFSQDKMGAITGSQYRPLPPAWLLVGAARSGTPIHDHPLNAAWNSLLDGCKLWVIFPPDVDEGFLLLDEG----------EDYDLSAVEWFLWWAGGLASADDCSTEDSLAKRLLPSQTKIIVQHPGETVFLPPGWWHVVLNIRTSTAISYSLALRRDYERHWLALFEEDEAFAVFWRDALEREKAEA 360          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A7S2CZM5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZM5_9STRA)

HSP 1 Score: 244 bits (622), Expect = 8.290e-74
Identity = 151/354 (42.66%), Postives = 182/354 (51.41%), Query Frame = 1
Query:  232 EITVGENCVVVGVGAGRKNYFRDNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGK-------------SWSLRDLAARTAG---RKVSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLG-----GKSSEHEGGGED--------------FDLSALEWFCRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVFLPIGWFHVVLNVEAST-ALSMSLTLRRDLPSVLPLFLEAEREFALW 1185
            ++T+G  C            F DNVER   S    + +GD LP +P V TG  D+WPA      G              SWS+  LAAR  G   R  S+DGGP FAR+S+    V +  +  Y +N+   D APLY+FDP++     TF D G+   D F  P CF+ D  A +    FRPLPP WLLVG  RSGT IHDHP TVAWN LL G KLW C PPDVD   LLL  G     G S + +G  E               FDL A+ WF        E       L K A VI+QR GEVVF+P GW+HVVLN  AST ALS S+ LRRD     P  +E + E AL+
Sbjct:    6 QVTIGPTC-----------RFVDNVERTAFSPGLFNRYGDDLPEVPAVFTGVGDDWPAARPVTGGSATAEACVVPFATSSWSVASLAARGCGANDRHFSVDGGPGFARLSLADARVGIDHFAAYCENDGDGDLAPLYIFDPALA--TRTFAD-GTPYCDEFGVPECFTHDTMAGLQGSIFRPLPPAWLLVGPRRSGTPIHDHPHTVAWNVLLDGTKLWVCLPPDVDPIFLLLGAGQERGRGSSGDEDGSAEGKAGVEQNEEDEEEGFDLEAIAWF--------ESWSKGTLLPKGACVIVQRAGEVVFVPAGWWHVVLNCSASTTALSHSIGLRRDFAKTWPSLVEEDPEMALF 337          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A7S2XR54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XR54_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.980e-60
Identity = 107/207 (51.69%), Postives = 133/207 (64.25%), Query Frame = 1
Query:  298 DNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDLAARTA-GRKVSLDGGPSFARMSMCAGSVSLAEYERYSKNES--------------GKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESAL 873
            DNV+R+  S F  + HGD LP+ P VLTG  D+W A++S   G++WS+ DLA R     K++LDGGP FARMSM AG VS++EYERY   ++                D APLY+FD  +L   S F +   ++ D    P CF+ D  A +   +FRPLPP WLLVGA RSGT +HDHP  VAWNALLVGCKLWCCFPP+VDES L
Sbjct:    2 DNVQRVPSSQF--ERHGDHLPYEPAVLTGCCDDWHAFSS--PGQTWSVSDLAHRLEPDMKLNLDGGPYFARMSMNAGKVSMSEYERYCYADTTPTTDANDACHDCAAMDIAPLYLFDADVL--NSKFANGQPVMDDLNGLPPCFAEDTMAPLTGSRFRPLPPAWLLVGAARSGTPMHDHPFFVAWNALLVGCKLWCCFPPNVDESVL 202          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: F0YH78_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH78_AURAN)

HSP 1 Score: 188 bits (477), Expect = 1.900e-52
Identity = 132/327 (40.37%), Postives = 158/327 (48.32%), Query Frame = 1
Query:  262 VGVGAGRKNYFRDNVER--IRGSMFADDVHG-DTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDLAARTAGRK-VSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAV---CDEKFRPLPPKWLLVGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSSEHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVFLPIGWFHVVLNVEASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPNSDLDRQEA 1221
            + VGA R     D   R  +  S   D   G    P  P V+ G +D WP  A       WSL  LAAR  G   + +DGGP  AR S+ +  VS A Y  Y+KN  G D APLYVFD +    R+     G         P C + DA   +    DE  RPLP  WLL GA RSGT +HDHP T A+  LL GCKLW   PP  D S L    GG          D+DLSA +WF R    D   P G       A++ +Q+P EVVF+P GW+HVVLN   + ALS SL L RD       FL+A    AL      + DR EA
Sbjct:   61 IDVGARRVTLRLDGAARDFVDASARVDGSEGLAACPKEPAVVAGLVDGWPGVAG-----DWSLAGLAARVGGATPLEVDGGPWEARASLSSARVSAAAYAAYAKNGGGGDDAPLYVFDAA---ERAALAGLGP-------PPPCLADDALPRLLGCADEAKRPLPRGWLLAGAARSGTPVHDHPLTCAYVVLLSGCKLWAVLPPGTDRSFLFPTSGG----------DYDLSAADWFLRW---DRGPPPG-------ARIFVQQPREVVFVPAGWWHVVLNASDNVALSRSLALERDFA-----FLDAGPATAL------ERDRAEA 341          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A109FP01_9BASI (Clavaminate synthase-like protein (Fragment) n=1 Tax=Rhodotorula sp. JG-1b TaxID=1305733 RepID=A0A109FP01_9BASI)

HSP 1 Score: 127 bits (318), Expect = 5.140e-29
Identity = 90/289 (31.14%), Postives = 134/289 (46.37%), Query Frame = 1
Query:  292 FRDNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDLAARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPT-TVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSSEHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRH---LHKSAKVIIQRPGEVVFLPIGWFHVVLNVEASTALSMSLTLRRDLPSVL 1146
            F   + R+ G      V   TLPH P +LT  + +WPA  S  + + W+L  LA R           P+ A  +  A   +L +Y RY  N   +D +PLY+F+   +   +    +G  + D +  P CFS D    +  E  RP   +WL+ G  RSG++ H  P  T AWNA+ VG K W  FPPDV    +  +  G   E         LS  EWF           G R          +  I R GE++++P GW+H+V+N+  + A++ +    R+LP+VL
Sbjct:  135 FSPTIARLDGRT----VTPSTLPHEPVILTDLMSDWPAM-SESSSRRWTLAHLAKRF----------PNIAFRAE-ATLTTLPDYTRYHDN-CAQDESPLYLFESEFVNKTANL--EGPSLGDDYSVPTCFSEDLFEVMGTE--RP-DYRWLIAGPTRSGSTWHVDPNHTSAWNAVTVGEKAWIMFPPDVTPPGVYASEDGAQVEAP-------LSLAEWFLSYYEHAKRVYGPRTTDSATRGKMREGICRAGEILYVPSGWWHIVVNLTPAIAVTQNYVSHRELPAVL 394          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: A0A238FDJ6_9BASI (BQ2448_4604 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FDJ6_9BASI)

HSP 1 Score: 128 bits (321), Expect = 1.230e-28
Identity = 104/326 (31.90%), Postives = 150/326 (46.01%), Query Frame = 1
Query:  280 RKNYFRDNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDLAARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVFDPSILGPRSTFCD----DGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHPT-TVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSSEHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRH---LHKSAKVIIQRPGEVVFLPIGWFHVVLNVEASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPNSDLDR--QEADC 1227
            R N F   + RI G     D+    LP  P +LT  +  W A   R +   W+L  LA R        +           A   +L +Y+ Y  +    D +PLY+FD   +  ++ F D    D  L RD ++ P CF  D  A +  E  RP   +WL+VG  RSG++ H  P  T AWNA+  G K W  FPP V         G   SE +G  E   L+  EWF       N   G +     L  + KV I R GEV ++P GW+H+V+N+E S A++ +   +R+LPSVL    +   + + + RP  +  +  +E DC
Sbjct:  203 RPNTFVSTIPRISGK----DLLPSDLPQEPCILTDLMTTWAA-TDRTSPHQWTLSRLAKRFPKTLFRAE-----------ATLTTLPDYQTYH-DRCEMDESPLYLFDSEYVR-KTQFVDEQGVDQGLGRD-YEVPECFREDLFAVMRHE--RP-DYRWLIVGTTRSGSTWHQDPNGTSAWNAVTTGSKAWIMFPPSVTPP------GVHVSEDQGQVE-APLALSEWFMSYWDFANMTYGPKAKDGALRNTMKVGICREGEVFYVPSGWWHIVVNLEPSIAVTQNYVSQRELPSVLQFMRDRPDQVSGFKRPRPEGSQVVEEEDC 499          
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Match: V4KRM6_EUTSA (JmjC domain-containing protein n=5 Tax=Brassicaceae TaxID=3700 RepID=V4KRM6_EUTSA)

HSP 1 Score: 126 bits (317), Expect = 2.380e-28
Identity = 90/285 (31.58%), Postives = 134/285 (47.02%), Query Frame = 1
Query:  295 RDNVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDLAARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVFDPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLLVGAVRSGTSIHDHP-TTVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSSEHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVFLPIGWFHVVLNVEASTALSMSLTLRRDLPSVL 1146
            RDNV R+RG    D +     P+ P +L G LD+WPA       K WS   L       KV+ D       +    GSV +     +S ++S  +  PLY+FDP        F +   ++   +D P  F  D  + + +E  RP   +W+++G   SG+S H  P +T AWNA++ G K W  FPPDV          G     +G      +S +EWF           G  +   K     I + GEV+F+P GW+H+V+N+E S A++ +   RR+L +VL
Sbjct:  196 RDNVTRVRGISVEDFITKFEEPNKPVLLEGCLDDWPAI------KKWSKDYLT------KVAKD-------VEFAVGSVEMKLENYFSYSDSVSEERPLYLFDPK-------FAEKVPILDSEYDVPVYFREDLFSVLGNE--RP-DYRWIIIGPSGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPP-------GVHPSPDGAEVACPVSIIEWFMNF-------YGDTKSWKKKPIECICKAGEVMFVPNGWWHLVINLEESIAITQNYVSRRNLLNVL 437          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19344.6204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8F7_9PHAE1.500e-28592.70JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A1E7FI75_9STRA3.040e-11056.09Clavaminate synthase-like protein n=1 Tax=Fragilar... [more]
A0A7S3QEB2_9STRA3.900e-10245.20Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A813J9B4_POLGL2.490e-8447.04Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S2CZM5_9STRA8.290e-7442.66Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XR54_9STRA2.980e-6051.69Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
F0YH78_AURAN1.900e-5240.37Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A109FP01_9BASI5.140e-2931.14Clavaminate synthase-like protein (Fragment) n=1 T... [more]
A0A238FDJ6_9BASI1.230e-2831.90BQ2448_4604 protein n=1 Tax=Microbotryum intermedi... [more]
V4KRM6_EUTSA2.380e-2831.58JmjC domain-containing protein n=5 Tax=Brassicacea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19344contigEcto-sp13_S_contig19344:801..2036 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score813.1
Seed ortholog evalue5.8e-233
Seed eggNOG ortholog2880.D7G489
Model size1236
KEGG rclassRC00279
KEGG koko:K00804,ko:K11323
KEGG ReactionR01658,R02003,R02061
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00367
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
EggNOG OGsKOG2130@1,KOG2130@2759
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-02_001750.1
EC2.5.1.1,2.5.1.10,2.5.1.29
Cds size1236
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462983.5458348-CDS-Ecto-sp13_S_contig19344:800..20361681462983.5458348-CDS-Ecto-sp13_S_contig19344:800..2036Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19344 801..2036 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19344.6204.1prot_Ecto-sp13_S_contig19344.6204.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19344 801..2036 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19344.6204.1

>prot_Ecto-sp13_S_contig19344.6204.1 ID=prot_Ecto-sp13_S_contig19344.6204.1|Name=mRNA_Ecto-sp13_S_contig19344.6204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=412bp
MERNRKAGRGGGPHTALPARERCGAVLPAASPAHHRHPGDSCEREYSETD
LAKLSIAPGAKLEDWMSPDSDTGTNKGEITVGENCVVVGVGAGRKNYFRD
NVERIRGSMFADDVHGDTLPHLPTVLTGFLDEWPAYASREAGKSWSLRDL
AARTAGRKVSLDGGPSFARMSMCAGSVSLAEYERYSKNESGKDAAPLYVF
DPSILGPRSTFCDDGSLVRDAFDTPACFSRDAAAAVCDEKFRPLPPKWLL
VGAVRSGTSIHDHPTTVAWNALLVGCKLWCCFPPDVDESALLLNLGGKSS
EHEGGGEDFDLSALEWFCRAGSSDNEEPGGRRHLHKSAKVIIQRPGEVVF
LPIGWFHVVLNVEASTALSMSLTLRRDLPSVLPLFLEAEREFALWGRPNS
DLDRQEADCGS*
back to top

mRNA from alignment at Ecto-sp13_S_contig19344:801..2036-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19344.6204.1 ID=mRNA_Ecto-sp13_S_contig19344.6204.1|Name=mRNA_Ecto-sp13_S_contig19344.6204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19344:801..2036- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAACGCAATCGAAAAGCCGGTCGCGGTGGCGGACCTCACACTGCTCT TCCTGCTCGAGAACGATGCGGTGCCGTTCTTCCCGCAGCGTCGCCCGCTC ACCACCGACATCCCGGAGATTCCTGCGAGCGCGAGTACAGCGAGACCGAT CTTGCCAAGCTGTCCATCGCGCCGGGAGCAAAGCTCGAGGACTGGATGTC ACCAGACTCCGATACCGGCACCAACAAGGGAGAAATCACTGTTGGGGAGA ACTGTGTCGTGGTGGGAGTCGGAGCTGGAAGGAAGAACTATTTTCGTGAC AACGTGGAACGAATACGTGGATCAATGTTTGCCGACGACGTCCACGGAGA TACGTTGCCCCACCTCCCGACAGTCCTGACCGGCTTCTTGGACGAGTGGC CTGCGTACGCTTCTCGCGAAGCGGGAAAATCCTGGAGTTTGCGAGACTTG GCGGCTCGCACGGCTGGGAGGAAGGTTTCCCTTGACGGCGGGCCTTCCTT CGCTCGCATGTCCATGTGTGCCGGGAGCGTCAGCCTGGCAGAGTACGAGC GGTACTCGAAGAACGAGTCGGGTAAGGATGCCGCGCCCCTTTACGTATTT GATCCGAGCATCTTGGGGCCTCGATCTACCTTCTGCGACGACGGGAGTCT CGTCAGGGACGCATTCGACACGCCCGCGTGCTTCTCGCGCGACGCCGCTG CGGCAGTGTGCGACGAAAAGTTCCGGCCTCTCCCTCCGAAGTGGCTCTTG GTTGGTGCCGTCCGAAGCGGCACTTCGATTCACGACCACCCAACCACAGT GGCGTGGAACGCGCTACTCGTCGGGTGCAAGCTGTGGTGCTGCTTTCCGC CAGACGTGGACGAAAGCGCTCTGCTTCTGAATTTAGGTGGAAAAAGCAGC GAGCACGAAGGAGGAGGGGAAGACTTCGACTTGTCAGCCTTGGAGTGGTT TTGTCGGGCTGGCTCGAGTGACAACGAGGAGCCCGGGGGACGACGGCATC TTCACAAGAGCGCGAAGGTAATCATCCAGCGCCCCGGAGAGGTTGTGTTT TTGCCCATCGGGTGGTTCCACGTCGTGCTCAACGTCGAAGCGAGTACGGC GCTTAGTATGAGTTTGACGCTCCGGCGGGATCTGCCCTCGGTGCTACCCT TGTTTTTGGAAGCTGAGCGTGAGTTTGCGCTTTGGGGTCGACCCAACAGC GACTTGGATAGGCAAGAGGCGGACTGTGGCTCCTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19344:801..2036-

>mRNA_Ecto-sp13_S_contig19344.6204.1 ID=mRNA_Ecto-sp13_S_contig19344.6204.1|Name=mRNA_Ecto-sp13_S_contig19344.6204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19344:801..2036- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAACGCAATCGAAAAGCCGGTCGCGGTGGCGGACCTCACACTGCTCT
TCCTGCTCGAGAACGATGCGGTGCCGTTCTTCCCGCAGCGTCGCCCGCTC
ACCACCGACATCCCGGAGATTCCTGCGAGCGCGAGTACAGCGAGACCGAT
CTTGCCAAGCTGTCCATCGCGCCGGGAGCAAAGCTCGAGGACTGGATGTC
ACCAGACTCCGATACCGGCACCAACAAGGGAGAAATCACTGTTGGGGAGA
ACTGTGTCGTGGTGGGAGTCGGAGCTGGAAGGAAGAACTATTTTCGTGAC
AACGTGGAACGAATACGTGGATCAATGTTTGCCGACGACGTCCACGGAGA
TACGTTGCCCCACCTCCCGACAGTCCTGACCGGCTTCTTGGACGAGTGGC
CTGCGTACGCTTCTCGCGAAGCGGGAAAATCCTGGAGTTTGCGAGACTTG
GCGGCTCGCACGGCTGGGAGGAAGGTTTCCCTTGACGGCGGGCCTTCCTT
CGCTCGCATGTCCATGTGTGCCGGGAGCGTCAGCCTGGCAGAGTACGAGC
GGTACTCGAAGAACGAGTCGGGTAAGGATGCCGCGCCCCTTTACGTATTT
GATCCGAGCATCTTGGGGCCTCGATCTACCTTCTGCGACGACGGGAGTCT
CGTCAGGGACGCATTCGACACGCCCGCGTGCTTCTCGCGCGACGCCGCTG
CGGCAGTGTGCGACGAAAAGTTCCGGCCTCTCCCTCCGAAGTGGCTCTTG
GTTGGTGCCGTCCGAAGCGGCACTTCGATTCACGACCACCCAACCACAGT
GGCGTGGAACGCGCTACTCGTCGGGTGCAAGCTGTGGTGCTGCTTTCCGC
CAGACGTGGACGAAAGCGCTCTGCTTCTGAATTTAGGTGGAAAAAGCAGC
GAGCACGAAGGAGGAGGGGAAGACTTCGACTTGTCAGCCTTGGAGTGGTT
TTGTCGGGCTGGCTCGAGTGACAACGAGGAGCCCGGGGGACGACGGCATC
TTCACAAGAGCGCGAAGGTAATCATCCAGCGCCCCGGAGAGGTTGTGTTT
TTGCCCATCGGGTGGTTCCACGTCGTGCTCAACGTCGAAGCGAGTACGGC
GCTTAGTATGAGTTTGACGCTCCGGCGGGATCTGCCCTCGGTGCTACCCT
TGTTTTTGGAAGCTGAGCGTGAGTTTGCGCTTTGGGGTCGACCCAACAGC
GACTTGGATAGGCAAGAGGCGGACTGTGGCTCCTGA
back to top