mRNA_Ecto-sp13_S_contig19339.6201.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: D7G3A2_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A2_ECTSI) HSP 1 Score: 580 bits (1495), Expect = 1.340e-203 Identity = 289/319 (90.60%), Postives = 299/319 (93.73%), Query Frame = 1
Query: 1 KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASEEEKSKTTRVEGFELFEKGDIHLQPGFDPPVAVKKILVEREERLXXXXXXXXXXXXETKHV 957
KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFA V E ++ G+C + LHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVG+WVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAAS+EEKS++TRVEGF LF++GDIHLQPGFDPPVAVKKILVEREE XXXXXXXX ETKHV
Sbjct: 309 KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFADFSVSEEDIMTSGQCGCLDYDLHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGTWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASDEEKSESTRVEGFGLFKQGDIHLQPGFDPPVAVKKILVEREEXXXXXXXXXX----ETKHV 623
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: A0A6H5K0B2_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B2_9PHAE) HSP 1 Score: 568 bits (1464), Expect = 1.470e-196 Identity = 288/319 (90.28%), Postives = 293/319 (91.85%), Query Frame = 1
Query: 1 KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASEEEKSKTTRVEGFELFEKGDIHLQPGFDPPVAVKKILVEREERLXXXXXXXXXXXXETKHV 957
KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFA V E V+ G+C + L EGDDYKKVWTAFTSFYTFDQEFTEEEMRILA QWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPY IM+DVITPQFTFYGKKAPNTM+NRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASEEEKSKTTRVEGF LFEKGDIHLQPGFDPP AVKKILVE XXXXXXXXX ETKHV
Sbjct: 474 KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFADFSVSEEDVMTSGQCGCLDYDLVEGDDYKKVWTAFTSFYTFDQEFTEEEMRILATQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYGIMSDVITPQFTFYGKKAPNTMQNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASEEEKSKTTRVEGFGLFEKGDIHLQPGFDPPAAVKKILVEXXXXXXXXXXXXXX---ETKHV 789
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 197 bits (502), Expect = 5.990e-54 Identity = 107/283 (37.81%), Postives = 151/283 (53.36%), Query Frame = 1
Query: 28 IVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAP-----NTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFF-----DTSTMKSGPKGTAASEEEKSKTTR---VEGFELFEKGDI 837
+VGEE L ++ FV RKDMFRD +F C G +VL G C L +GDDY +++ + + E R L C+ + G+ QSSS LDP+FWS HPTMERL ++ +L G TD+ WPD ++ DG Y IS S+ C GHRGSD+FP+DI+ + + G K NTM NR ++ FDP NALP++YD FEW+HC+E G+D D + + ++ GP G A S ++ + + G +FEK D+
Sbjct: 465 LVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESGVCGCHGYDLTQGDDYLQIFESMVFMKELMGDSDENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEEASRGEGPGGQAMSAKKGPRAVSRQSIGGGTVFEKDDL 747
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 173 bits (438), Expect = 2.740e-45 Identity = 96/259 (37.07%), Postives = 144/259 (55.60%), Query Frame = 1
Query: 10 LDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFA--GSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQ---EFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRS---DTCNGHRGSDIFPYDIMT---DVITPQFTFYGK-KAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKS 750
+ V ++VGE+ S+S F +RK+++RD F+C G A G+P E +L G+C + L +GDD+K ++T S FD ++ +E R + C + G+ + S LDPTFW+MHPTMERL +F L G TD+ WPD S+ DG ++++ T DTC+GH GSD+FP+D++ D + G + N + NR ++ + D N LP++YDNF W HC + G DF D +D ST S
Sbjct: 438 ISSVSSLVGEKNANSLSLKTFDQRKNLWRDGFFECEGSAAVGTPADE--LLSSGKCGCLGYDLSQGDDWKTIYT--NSTVDFDDVIGDYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDG---NIVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAWDASTSSS 689
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.030e-44 Identity = 89/262 (33.97%), Postives = 144/262 (54.96%), Query Frame = 1
Query: 1 KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTF-----YGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAA 771
++ +++ +VG+ ++ F+ RK+++RD +FKC G A +V++ RC + L EG+DY++++ + ++ + R + C + G+ Q+SS LDP+FWS HPTMERL ++ +L G TD+SWPD ++ DG +S ++C GH GSD+FP+ ++ D T F + N + NR ++ FDP NALP++YD F W HC+ GYDF D + +ST KS K T+A
Sbjct: 495 EETYERIEGLVGKIAASQLAEQSFIHRKNLYRDGIFKCDGRADVAQSSEEVML-SRCGCLGYNLTEGNDYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLL-DTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQSSTKKS--KSTSA 752
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 170 bits (431), Expect = 2.340e-44 Identity = 92/250 (36.80%), Postives = 138/250 (55.20%), Query Frame = 1
Query: 10 LDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFA--GSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQ---EFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTD---VITPQFTFYG-KKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFD 732
+ + ++VGE+ S+S F +RK+++RD F C G A G+P E +L+ G+C + L++GDD+K ++T S FD ++ +E R + C + G+ + S LDPTFW MHPTMERL +F L G TD+ WPD S+ DG ST DTC+GH GSD+FP+ ++ D + G ++ N + NR ++ + D N LP++YDNF W HC + G DF D +D
Sbjct: 436 ISSISSLVGEKNANSLSLNTFDQRKNLWRDGFFACEGSAAVGAPADE--LLLSGKCGCLGYDLNQGDDWKTIYT--NSTLDFDDVIGDYDDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAWD 681
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 164 bits (416), Expect = 4.200e-43 Identity = 94/261 (36.02%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 10 LDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFA--GSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQ---EFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYG----KKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKS-GPKG 762
+ + ++VGE+ S+S F +RK ++RD F C G A G+P E +L G+C + L +GDD+K ++T S FD ++ ++ R + C + G+ + S LDPTFW MHPTMERL +F L G TD+ WPD S+ DG S DTC+GH GSD+FP+ ++ D G ++ N + NR ++ + D N LP++YD+F W HC + G DF D +D ST + G KG
Sbjct: 265 ISYISSLVGEKNANSLSLNTFDQRKSLWRDDFFACEGSAAVGAPADE--LLSSGKCGCLGYDLSQGDDWKTIYT--NSTLDFDDVIGDYDDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAWDASTASNDGRKG 521
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 167 bits (424), Expect = 4.960e-43 Identity = 83/244 (34.02%), Postives = 132/244 (54.10%), Query Frame = 1
Query: 1 KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTSFYTFDQEFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIM---TDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSD 723
+K + +VG ++ Y F+ RK++FRD +F C G A A+VL G+C L +GDDY+ ++ +F + R + C + G+ Q+SS LDP+F++ HPTMERL ++ +L G TD++WPD+ + DG +S +TC GH GSD+FP+ I+ TD + G + NT+ NR L++ FD N++ ++YD F+W+HC G+DF+D
Sbjct: 509 EKTFGAIAELVGPSIAEDLALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQCGCRGYDLTQGDDYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGMENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFND 752
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 153 bits (387), Expect = 4.520e-38 Identity = 93/274 (33.94%), Postives = 136/274 (49.64%), Query Frame = 1
Query: 1 KKNLDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCVHVAGVLHEG-DDYKKVWTAFTSFYTFDQ---EFTEEEMRILAMQWCNGEVGMGESSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAP----NTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTSTMKSGPKGTAASEEEKSKTT 798
++ + V +VGEE S++ Y F +RK+ +RD F C G A + E V G C + L DD++ ++ + S FD ++ +E R++ + C + G+ Q+ S LDPTFW MHPTMERL +F L G D WPD D + +IS D C GH GSD+FP++++ G K N+ NR ++ DP N L ++YD F+W HC GYDF FD S+ AS E+K+K+T
Sbjct: 470 EETMASVSGLVGEENANSLALYAFDQRKNFWRDGFFDCEGTAEAGATEDDVFSAGMCGCLGFDLSSNSDDWQTIY--YNSTIDFDNVISDYDDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPD-------ADASSSNEMISRYGDDCVGHGGSDVFPFNLLDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFDTAFDYSST--------ASAEDKAKST 726
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 150 bits (378), Expect = 8.530e-37 Identity = 87/262 (33.21%), Postives = 134/262 (51.15%), Query Frame = 1
Query: 10 LDKVMAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCVHVAGVLHEGDDYKKVWTAFTS-FYTFDQEFTEEEMRILAMQWCNGEVGMGE----------SSQSSSPLDPTFWSMHPTMERLLVFKLLAGTFTDYSWPDEVGSWVGMDGVEYDVIISTRS---DTCNGHRGSDIFPYDIMT---DVITPQFTFYGK-KAPNTMKNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTST 741
+ + ++VGE S+ F +RK ++ +F C GFA + ++L G+C + L +GDD+K ++ TS F ++ +E R + C + G+ ++ S LDPTFW MHPT+ERL VF L G T++ WPD S+ +G D ++ T S D C GH GSD+FP+ ++ D + + G + NT+ NR + D N LP++YDNF+W HC + G DF D +D ST
Sbjct: 548 ISSLSSLVGENNANSLLN-TFKQRKLLWSYGMFGCEGFAAEGIPTDELLSSGKCGCLGYNLSQGDDWKTIYANPTSNLDDFIGDYDDETKRQVVAAVCASTIYYGDHLHVSVRALFGHEAGSSLDPTFWPMHPTIERLFVFSALTGQLTNFHWPDSELSYTDTNG---DTVVETTSNYGDKCYGHGGSDVFPFGLLDNDDDALKIKTGMQGNGETGNTLTNREALANMDGRFNNLPYVYDNFKWEHCLDSGIDFDDAWDAST 805 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19339.6201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19339.6201.1 >prot_Ecto-sp13_S_contig19339.6201.1 ID=prot_Ecto-sp13_S_contig19339.6201.1|Name=mRNA_Ecto-sp13_S_contig19339.6201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=313bp MAIVGEEYRLSMSGYLFVKRKDMFRDAVFKCRGFAGSPVGEAKVLVPGRCback to top mRNA from alignment at Ecto-sp13_S_contig19339:850..2968- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19339.6201.1 ID=mRNA_Ecto-sp13_S_contig19339.6201.1|Name=mRNA_Ecto-sp13_S_contig19339.6201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2119bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19339:850..2968- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19339:850..2968- >mRNA_Ecto-sp13_S_contig19339.6201.1 ID=mRNA_Ecto-sp13_S_contig19339.6201.1|Name=mRNA_Ecto-sp13_S_contig19339.6201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=939bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19339:850..2968- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |