mRNA_Ecto-sp13_S_contig19308.6193.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19308.6193.1
Unique NamemRNA_Ecto-sp13_S_contig19308.6193.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: D8LJ83_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ83_ECTSI)

HSP 1 Score: 542 bits (1397), Expect = 1.510e-192
Identity = 257/266 (96.62%), Postives = 259/266 (97.37%), Query Frame = 2
Query:  206 MPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSECDNTDWVAIAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITPEDFAKFTCK 1003
            MPLYETQWEEYLKEKKTQVGGRIFEHT KHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSE DNTDWVAIAQQQCEKHL SSQCPLVFMD+SLDPSARPQRVVFQLYSQDCPTTCENFR+LCTGEKGMSSN KKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDES AIKLNE GVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITPEDFAK TCK
Sbjct:    1 MPLYETQWEEYLKEKKTQVGGRIFEHTEKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSEGDNTDWVAIAQQQCEKHLTSSQCPLVFMDISLDPSARPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNETGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITPEDFAKLTCK 266          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: A0A7S2V0W8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.850e-72
Identity = 132/300 (44.00%), Postives = 177/300 (59.00%), Query Frame = 2
Query:  101 NGIVVVGCVSDASFHRCCRLVRVLNDFGLSARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGG--RTYMGGIEELIRFAEATV---APPFDRSECDNTDWVAIAQQQCEKHLASSQC-----PLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQI 970
            + ++V G + D ++H C   +        S  V    L + +W  +L E+K + GG +      ++V+ DG   R Y+G   EL  +A+      APP    E +      IA +   +HL  +          +MD+    S  PQRV FQL+S  CP TCENFR LC G      NR+ L YKGSPFHRVV+ GWVQGGDI+SG+GDGG SIYGE F DE+ A++ N  G+LAMAN GPHTNGSQF +TL P PWLN++ V FGRV +G++++R M+  ET NQRP M+C V  CG+I
Sbjct:   14 SALIVAGRIDDPTYHLCRHFLMDFMSEIDSIAVEECGLLQLEWYAFLDERKKEFGGVVLAPGDPYMVILDGPKERQYLGRERELRVWAKKEFDYEAPPAKGLENE------IAAKYESEHLYLTAIRDAGHKACYMDIKTGNSD-PQRVEFQLFSDICPKTCENFRVLCEG------NRQMLQYKGSPFHRVVKGGWVQGGDIISGSGDGGISIYGETFPDETFAVEFNTEGILAMANAGPHTNGSQFFITLGPLPWLNNRAVAFGRVARGMEIIRGMNNMETENQRPKMDCTVVDCGEI 300          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: A0A452HTC7_9SAUR (Peptidyl-prolyl cis-trans isomerase n=14 Tax=Cryptodira TaxID=8464 RepID=A0A452HTC7_9SAUR)

HSP 1 Score: 230 bits (587), Expect = 1.890e-69
Identity = 121/296 (40.88%), Postives = 179/296 (60.47%), Query Frame = 2
Query:  107 IVVVGCVSDASFH--RCCRLVRVLNDFGLSARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSECDNTDWVA----IAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITP 976
            +VVVG + +  FH  +C      LN     A    +PL E  W EYL+EKK ++ G  +E+ +  +   DG    +G  +EL+ +A       +D+    +   VA    I +  C KH+ +S+   V++D+++        ++F+LYS  CP TC NFRSLCTGE G S +  +L YK S FHR+V++GW+QGGDI +G GDGG SIYG  F DE+ +I  N+ G+L MAN G H+NGSQF +TL P P+++ K V FG++I+G +VL+++ +  T N+RPV+ECK+  CG   P
Sbjct:    9 LVVVGLLKEPVFHMAKCTAEALRLNFPNKIAEPVVLPLLEFAWHEYLQEKKKELKGETWEYPSSVMCFIDG--QLLGSEQELLTWA-------YDKWNYQDFKPVALYQAITEDFCTKHMQNSKHMFVYLDIAIQEQPTGT-LLFELYSDMCPKTCANFRSLCTGEAGTSHSGMELTYKESVFHRLVKNGWIQGGDIAAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGQLIEGTEVLQKLEDVSTYNERPVVECKIINCGVFVP 294          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: A0A836C6W1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W1_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.680e-69
Identity = 131/300 (43.67%), Postives = 170/300 (56.67%), Query Frame = 2
Query:  107 IVVVGCVSDASFHRCCRLVRVLNDFGLSARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRT-YMGGIEELI--RFAEATVAPPFDRSECDNTDWVAIAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGE----VFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITPEDF 985
            I V G +S   FH+CC          L   V    L E  WE Y+  K+ Q GG+ ++HTA+++VL DG  T     ++ L+  RF + T+       E    DW A A+   +   A+ + PLV+MDV  D   +PQRVVF+LYS  CP  CENFR LCT      S R    Y G+PFHRVV  GWVQGGD+  G GD G           F DE+  +K + AGVLAMAN GPHTN SQFLV LA  PWL+ + V FGRV +G++ LR + +  TLNQRP+ + +V  CG++ PED 
Sbjct:    3 ITVAGDISAPEFHQCCSYTNEAA-LVLQTDVDIKALLEIDWEAYVVRKQQQDGGQYYKHTARYVVLVDGAYTGVQSDLQALLQARFPQHTI-------ERIPQDWQAAARHALK---AAVRNPLVYMDV--DVGGKPQRVVFELYSDVCPRACENFRRLCT------SRRAGQTYLGTPFHRVVPGGWVQGGDVAGGAGDRGSCALDNCASGTFEDETFDVKFDAAGVLAMANAGPHTNASQFLVALAQLPWLDRRAVAFGRVARGMRALRALEDVATLNQRPLRDARVVACGELAPEDL 283          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: A0A087YNR3_POEFO (Peptidyl-prolyl cis-trans isomerase n=14 Tax=Poeciliinae TaxID=586240 RepID=A0A087YNR3_POEFO)

HSP 1 Score: 225 bits (573), Expect = 2.270e-67
Identity = 125/297 (42.09%), Postives = 178/297 (59.93%), Query Frame = 2
Query:  107 IVVVGCVSDASFHRCCRLVRVLN----DFGLSARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEA----TVAPPFDRSECDNTDWVAIAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGT-GDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQI 970
            I +VG + D +FH    +   L     D  L   +  +PL E  W EYL +KK ++ G ++E+ +  +   +G    +G  ++L  +AE     T+A P D        + AI ++   KHL  +    VF+DV +     P+R+ F+L+S  CP T ENF +LCTGE+G+S +   L+YKGS FHR+V +GWVQGGDI   + GDGG SIYG  F DES AI  ++ G L MAN GPHTNGSQF +TL P PW++   V FGRVI+G++VL+++ E +T N+RP  EC+V  CG +
Sbjct:    7 IEIVGVIKDPNFHAARSIAEGLKQQFPDDLLDPVI--VPLLEFDWHEYLCKKKRELRGDVWEYPSNVICFLNG--VLLGNEKQLASWAENQWNFTLAHPEDF-------YTAITEEYYAKHLQKTGHKFVFLDVVV-AGEDPRRICFELFSDVCPKTSENFEALCTGERGLSESGLPLHYKGSLFHRIVPNGWVQGGDISPNSRGDGGESIYGPTFEDESFAISHSKRGTLGMANKGPHTNGSQFYITLQPAPWMDKTYVAFGRVIEGVEVLKKLEESKTSNERPKYECRVSACGVL 291          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: UPI00193FA8DD (probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X2 n=2 Tax=Testudinoidea TaxID=8486 RepID=UPI00193FA8DD)

HSP 1 Score: 224 bits (570), Expect = 5.990e-67
Identity = 111/261 (42.53%), Postives = 167/261 (63.98%), Query Frame = 2
Query:  206 MPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSECDNTDWVA----IAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITP 976
            +PL E  W EYL+EKK ++ G  +E+ +  +   DG    +G  +EL+++A       +D+    +   VA    I +  C KH+ +S+   V++D+++        ++F+LYS  CP TC NFRSLCTGE G S +  +L YK S FHR+V++GW+QGGDI +G GDGG SIYG  F DE+ +I  N+ G+L MAN G H+NGSQF +TL P P+++ K V FG++I+G +VL+++ +  T N+RPV+ECK+  CG + P
Sbjct:   41 LPLLEFAWHEYLQEKKKELKGETWEYPSSVMCFIDG--QLLGSEQELLKWA-------YDKWNYQDFKPVALYQAITEDFCTKHMQNSKHVFVYLDIAIQEQPTGT-LLFELYSDMCPKTCANFRSLCTGEAGTSRSGMELTYKESVFHRLVKNGWIQGGDITAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGQLIEGTEVLQKLEDVSTYNERPVVECKIINCGVLVP 291          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: A0A674HWS8_TERCA (Peptidyl-prolyl cis-trans isomerase n=10 Tax=Cryptodira TaxID=8464 RepID=A0A674HWS8_TERCA)

HSP 1 Score: 222 bits (566), Expect = 6.430e-67
Identity = 110/259 (42.47%), Postives = 167/259 (64.48%), Query Frame = 2
Query:  212 LYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSECDNTDWVA----IAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITP 976
            L E  W EYL+EKK ++ G  +E+ ++ +   DG    +G  +EL+++A       +D+    +   VA    I +  C KH+ +++   V++D+++        ++F+LYS  CP TCENFRSLCTGE G S +  +L YK S FHR+V++GW+QGGDI +G GDGG SIYG  F DE+ +I  N+ G+L MAN G H+NGSQF +TL P P+++ K V FG +I+G +VL+++ +  T N+RPV+ECK++ CG + P
Sbjct:    1 LLEFAWHEYLQEKKKELKGETWEYPSRVMCFIDG--QLLGSEQELLKWA-------YDKWNYQDFKPVALYQAITEDFCTKHMQNTKHVFVYLDIAIQEQPTGT-LLFELYSDMCPKTCENFRSLCTGEAGTSRSGLELTYKESVFHRLVKNGWIQGGDITAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGYLIEGTEVLQKLEDVSTYNERPVVECKINNCGVLVP 249          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: UPI000EA9FB60 (problable inactive peptidyl-prolyl cis-trans isomerase-like 6 n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=UPI000EA9FB60)

HSP 1 Score: 223 bits (567), Expect = 2.280e-66
Identity = 120/293 (40.96%), Postives = 176/293 (60.07%), Query Frame = 2
Query:  107 IVVVGCVSDASFHRCCRLVRVL--NDFGLSARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSECDNTD-WVAIAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITP 976
            + VVG +++ SFH     V  L  N     A    +PL +  W+EYL+EKK ++ G I+E+ +  +   DG    +G  + L+++A       +D  +   T  + AI      K+L + Q   VFM++++   +   +++F+LYS  CP TC NF+ LCTGEKG S +   L YK S FHR+V++GW+QGGDI  G G+GG SIYG VF DES A+  ++ GVL M N G HTNGSQF +TL P P+LN K V FG++I+G +VL+E+   ET N+RP ++C++  C    P
Sbjct:   16 VEVVGLLTEPSFHMAAHAVETLRRNFPKKIAEPKVLPLLQFAWDEYLQEKKKELRGEIWEYPSSVMCFVDG--QLLGDEKMLLKWAYDV----WDYKDFKPTALYEAITSDFLTKYLKAKQRMFVFMEIAIHEVSMG-KLLFELYSDICPRTCHNFKCLCTGEKGYSESGLTLTYKDSIFHRIVKNGWIQGGDIDGGKGNGGESIYGPVFEDESFAVPHDKRGVLGMVNKGRHTNGSQFYITLQPAPYLNTKYVAFGQIIEGSQVLQELELTETFNERPKLQCRIINCNVFQP 301          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: A0A151MJJ3_ALLMI (Peptidyl-prolyl cis-trans isomerase n=7 Tax=Crocodylia TaxID=1294634 RepID=A0A151MJJ3_ALLMI)

HSP 1 Score: 221 bits (563), Expect = 7.290e-66
Identity = 116/294 (39.46%), Postives = 179/294 (60.88%), Query Frame = 2
Query:  113 VVGCVSDASFH--RCCRLVRVLNDFGLSARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSECDNTD----WVAIAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITP 976
            VVG + +++F   +C      LN     A    +PL +  W EYL+EKK ++ G I+E+ ++ +   DG    +G  ++L+ +A       F++    +      + AI +  C+K++ ++Q   V++D ++        ++F+LYS  CP TCENFR+LCTGE G+S +  +L YK S FHR+V++GW+QGGDI  G GD G SI+G  F DE+ +I  N+ GVL MAN G H+NGSQF +TL P P+L+ K V FG++I+G  VL+++ +  T N+RPV+ECK+  CG   P
Sbjct:   11 VVGHLKESAFQVAKCAAEALRLNFPTKIAEPVLLPLQQVAWHEYLQEKKKELRGEIWEYPSRVMCFVDG--QLLGNEKKLLEWA-------FEKWNYQDFKPEALYQAITEDFCKKYMKNTQHVFVYLDAAIQEQPLGT-LLFELYSDACPKTCENFRALCTGEAGISRSGLQLTYKESIFHRIVKNGWIQGGDIAGGRGDDGESIFGPTFEDENFSIPHNKRGVLGMANKGRHSNGSQFYITLQPAPYLDRKYVAFGQLIEGTDVLQKLEDLPTCNERPVVECKIISCGVFEP 294          
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Match: H2Z9J3_CIOSA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z9J3_CIOSA)

HSP 1 Score: 221 bits (562), Expect = 1.430e-65
Identity = 121/311 (38.91%), Postives = 183/311 (58.84%), Query Frame = 2
Query:   65 LAIRILRMSSPSNGIVVVGCVSDASFH--RCCR--LVRVLNDFGLSARVTSMPLYETQWEEYLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFDRSECD---NTDWVAIAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYSQDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITP 976
            LA      ++ +  I V G +   +FH  +CC   L    +D      + SM   E +W+ +++ KK ++ G ++ +T   L   +     +G  +EL+++A+      +D +  D   +  + A+A +    +  +S    VFMD+S+D S +  R++F+LYS  CP TC NFRSLCTGEKG   +  +LNY  SP HR+V +GW+QGGDI+ G GDGG SIYGEVF DE+ A+  +  GVL MAN G HT GSQF +TL P PW+N + V FGR+I+G ++L+ M    T N+RP ++C++  CG+  P
Sbjct:    6 LAFATKMPAASATHIEVYGLLQTEAFHIAKCCAEDLKSKFDDKYAEPTIKSM--LECEWDRFVEAKKIELKGDLWAYTESVLCFVNNN--LIGNHKELLQWAQ------YDSNYEDFRPDALYSAMATEGYRDYFLNSDNEFVFMDISID-SEKSGRLLFELYSSICPKTCANFRSLCTGEKGSLPSGLQLNYSSSPIHRIVPNGWIQGGDILHGRGDGGESIYGEVFEDENFAVPHDTRGVLGMANKGRHTAGSQFYITLQPSPWMNCQYVAFGRLIEGTELLKTMENLPTFNERPKVDCRISGCGKFVP 305          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19308.6193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ83_ECTSI1.510e-19296.62Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A7S2V0W8_9STRA1.850e-7244.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A452HTC7_9SAUR1.890e-6940.88Peptidyl-prolyl cis-trans isomerase n=14 Tax=Crypt... [more]
A0A836C6W1_9STRA2.680e-6943.67Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A087YNR3_POEFO2.270e-6742.09Peptidyl-prolyl cis-trans isomerase n=14 Tax=Poeci... [more]
UPI00193FA8DD5.990e-6742.53probable inactive peptidyl-prolyl cis-trans isomer... [more]
A0A674HWS8_TERCA6.430e-6742.47Peptidyl-prolyl cis-trans isomerase n=10 Tax=Crypt... [more]
UPI000EA9FB602.280e-6640.96problable inactive peptidyl-prolyl cis-trans isome... [more]
A0A151MJJ3_ALLMI7.290e-6639.46Peptidyl-prolyl cis-trans isomerase n=7 Tax=Crocod... [more]
H2Z9J3_CIOSA1.430e-6538.91PPIase cyclophilin-type domain-containing protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19308contigEcto-sp13_S_contig19308:439..3323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score543.1
Seed ortholog evalue8.3e-152
Seed eggNOG ortholog2880.D8LJ83
Preferred namePPIL6
Model size1255
KEGG koko:K01802,ko:K12739
Hectar predicted targeting categoryother localisation
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
Exons5
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0546@2759
Ec32 ortholog descriptionradial spoke protein 12
Ec32 orthologEc-02_005120.1
EC5.2.1.8
Cds size921
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19308.6193.1prot_Ecto-sp13_S_contig19308.6193.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19308 524..3074 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462982.401814-UTR-Ecto-sp13_S_contig19308:438..5231681462982.401814-UTR-Ecto-sp13_S_contig19308:438..523Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19308 439..523 +
1681462982.4704058-UTR-Ecto-sp13_S_contig19308:3074..33231681462982.4704058-UTR-Ecto-sp13_S_contig19308:3074..3323Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19308 3075..3323 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462982.414912-CDS-Ecto-sp13_S_contig19308:523..7181681462982.414912-CDS-Ecto-sp13_S_contig19308:523..718Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19308 524..718 +
1681462982.4275734-CDS-Ecto-sp13_S_contig19308:966..11251681462982.4275734-CDS-Ecto-sp13_S_contig19308:966..1125Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19308 967..1125 +
1681462982.4404266-CDS-Ecto-sp13_S_contig19308:1584..17571681462982.4404266-CDS-Ecto-sp13_S_contig19308:1584..1757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19308 1585..1757 +
1681462982.4521537-CDS-Ecto-sp13_S_contig19308:2060..23181681462982.4521537-CDS-Ecto-sp13_S_contig19308:2060..2318Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19308 2061..2318 +
1681462982.4615963-CDS-Ecto-sp13_S_contig19308:2938..30741681462982.4615963-CDS-Ecto-sp13_S_contig19308:2938..3074Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19308 2939..3074 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19308.6193.1

>prot_Ecto-sp13_S_contig19308.6193.1 ID=prot_Ecto-sp13_S_contig19308.6193.1|Name=mRNA_Ecto-sp13_S_contig19308.6193.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp
MSSPSNGIVVVGCVSDASFHRCCRLVRVLNDFGLSARVTSMPLYETQWEE
YLKEKKTQVGGRIFEHTAKHLVLQDGGRTYMGGIEELIRFAEATVAPPFD
RSECDNTDWVAIAQQQCEKHLASSQCPLVFMDVSLDPSARPQRVVFQLYS
QDCPTTCENFRSLCTGEKGMSSNRKKLNYKGSPFHRVVRDGWVQGGDIVS
GTGDGGWSIYGEVFGDESLAIKLNEAGVLAMANDGPHTNGSQFLVTLAPQ
PWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITPEDF
AKFTCK*
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mRNA from alignment at Ecto-sp13_S_contig19308:439..3323+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19308.6193.1 ID=mRNA_Ecto-sp13_S_contig19308.6193.1|Name=mRNA_Ecto-sp13_S_contig19308.6193.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2885bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19308:439..3323+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCACTCCTTCAGTCTCGATATCATCGAGTATCCCCCGTCGCCACCACCT CGCACCTTTTGCCGCTGGCTATACGCATTCTACGCATGTCGTCGCCGAGC AATGGAATCGTGGTGGTCGGGTGCGTCTCAGATGCTTCTTTTCACCGCTG CTGTCGATTAGTCAGAGTCCTGAATGACTTCGGGCTTTCAGCGAGGGTGA CGTCGATGCCCCTTTACGAGACTCAGTGGGAAGAGTATTTGAAAGAAAAG AAGACACAGGTCGGAGGAAGAATATTTGAGGTACGTCCACGTTGGTTCAC GTTCGGTTGAAACCAAATCTCAATGGCCTTTTGCGGTCGACAGGCTGGCC TAGAACATAGACATAAAAGTATGCGGTATGCACCCACCCGTGGTCCCGTG GTGCGCAGAGTGGTGCCTGCGCTTGATCTCAACGCCCTATCTCAATGATA TTTCTTTGTGAGGCCCCCCCGAGGGTTGCACTTACAGCAGTATCCACGCG TACGCTCTGTTTTTGTCTCCACGAACAGCACACAGCGAAACACCTTGTGC TACAAGATGGCGGCCGGACGTACATGGGTGGGATAGAAGAGCTCATTAGG TTTGCCGAGGCCACGGTTGCCCCTCCGTTCGATAGGAGCGAATGCGACAA TACGGATTGGGTTGCAATAGCGCAACAGCAGTGCGAGGTGAGTTACTGTG CGTACAGGAGCAAGATCATTTCCCTCTTGTCCTTGTGTTTCTAGATACTC CAAGAGGGTACAGCTTGACTGGCTCTTCCACGTGGAGTCCATGCCTGAAA GCCCACACCGTAAGGCAGCATGTACTGTAATACNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACGCTCGATTCGCAGAAAC ACCTCGCTAGCAGCCAGTGCCCATTGGTGTTCATGGATGTCTCTCTAGAT CCATCCGCCCGACCACAGAGAGTTGTGTTCCAGTTGTACAGCCAAGACTG CCCCACCACGTGCGAGAACTTCCGGTCCCTCTGCACGGGCGAAAAAGGAA TGTCGTCAAACAGGAAAAAGTAAGCGCAGCAATGGGATTGGCTGATTGCG GGATCTAAGGTGCTGAACATGAGTCTGCCATTGACCATACAGATGAACAC TCTTCGCACTTACATTGTAAGGTTCAGGACCTCCGGGTGTCGCTCCGAAA CAAGGCGACTGTAGCTGGAGCATGGCCACGCATCACTACTCTTCCGGGAG CGTGCATCCCGCACCCCGAAATGTATCATCTTCCAGAATGGGGGGAAAAC TGAACGTGCAAGATACACGATTGACACTTGATTTTGTCCCATCTTGGCGA TACATACGCGCAAACGCAAAAGGCTCAACTACAAGGGGAGCCCCTTCCAC CGCGTAGTACGAGACGGATGGGTGCAGGGAGGGGACATAGTGTCCGGGAC CGGGGACGGCGGCTGGTCGATCTACGGAGAAGTCTTCGGCGACGAATCCT TGGCGATCAAGCTGAACGAGGCCGGAGTCCTGGCCATGGCAAACGACGGT CCGCACACGAATGGCTCTCAGTTCCTAGTCACCCTCGCGCCCCAGCCGTG GTTGAACCACAAAGTGGTCGGGTTTGGCAGGTGAGAGGATATCGACTGTC CTTTGCGTCGAGGTGCATGATCGATTTTACGCGTCGAGGGTCCTGGGAAA GACGTAATAGGACCTGAGAGGTGTCGACCACGCTCTGACCGTCAATCGTG GGTCAGCACAAAACTTAGCAGGCGAGAACGTTTATTTGTTGTGTGGATCT CAAGGAATCGGTCCCTTTGTTCAGATCTAGTATAAACCCTATTTCCGTTC ACGAAATGATCCCCCTAGTCTCCGGGCCGTGACCGAATCAGAAGTAGGTG ATCGGTGAGCGTAGAACGTGTGGAAGGTAGTCCGCATCGTCAGAGTTTGT GCGAACGGGTGGTTGGACACTTACGTTCGATTGCAACTAGAAATCCATGT TATAACCCTTCATGTGCACTGCTGTAGCAGCCAAACAAAGATAGCCGGAT GACCATCGAACGAATTTTCTCGAGTATAATACTTCAATCATTGACTGCTA CGCAATGAGCTCTATGTTCTCCACAAGAAACCTGGTACCACACTCTCGCA CCCCGTCGCATGAGGGCTCTTTCACACACTTCTGATATACAGCGGCACAT CCGCAACCCTCCTTGGCTTTCTACTCCGCTTGGGTAAATGGCACTGGCAG GGTCATCAAGGGCCTGAAAGTGCTGCGAGAGATGAGCGAGGGGGAAACCC TTAACCAACGCCCGGTGATGGAGTGCAAGGTTCACAAGTGCGGGCAGATC ACTCCCGAAGACTTCGCCAAATTTACCTGCAAGTAGCCTCGCCCGCCGTC AGTAATAGGACAAGCACGTTTTTCGGGCAGGGATCTCCTCTGCTGCATGC CCACGTGACATTAGTACCTTTTCCTAGCCCAACGGCAGCGGCACCAAGGC AGAAAGGTTCATCGGATATGGACATCACAACCTACCTGTACATTGTTTTT TGCGTGTCAAGTGCTGTGCCCGTTCTCCGTATGAGTTTGAGCGTACGGGC TCATTGTCGGAAATCGTGCGCTAGCCACATAGACT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19308:439..3323+

>mRNA_Ecto-sp13_S_contig19308.6193.1 ID=mRNA_Ecto-sp13_S_contig19308.6193.1|Name=mRNA_Ecto-sp13_S_contig19308.6193.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19308:439..3323+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGTCGCCGAGCAATGGAATCGTGGTGGTCGGGTGCGTCTCAGATGC
TTCTTTTCACCGCTGCTGTCGATTAGTCAGAGTCCTGAATGACTTCGGGC
TTTCAGCGAGGGTGACGTCGATGCCCCTTTACGAGACTCAGTGGGAAGAG
TATTTGAAAGAAAAGAAGACACAGGTCGGAGGAAGAATATTTGAGCACAC
AGCGAAACACCTTGTGCTACAAGATGGCGGCCGGACGTACATGGGTGGGA
TAGAAGAGCTCATTAGGTTTGCCGAGGCCACGGTTGCCCCTCCGTTCGAT
AGGAGCGAATGCGACAATACGGATTGGGTTGCAATAGCGCAACAGCAGTG
CGAGAAACACCTCGCTAGCAGCCAGTGCCCATTGGTGTTCATGGATGTCT
CTCTAGATCCATCCGCCCGACCACAGAGAGTTGTGTTCCAGTTGTACAGC
CAAGACTGCCCCACCACGTGCGAGAACTTCCGGTCCCTCTGCACGGGCGA
AAAAGGAATGTCGTCAAACAGGAAAAAGCTCAACTACAAGGGGAGCCCCT
TCCACCGCGTAGTACGAGACGGATGGGTGCAGGGAGGGGACATAGTGTCC
GGGACCGGGGACGGCGGCTGGTCGATCTACGGAGAAGTCTTCGGCGACGA
ATCCTTGGCGATCAAGCTGAACGAGGCCGGAGTCCTGGCCATGGCAAACG
ACGGTCCGCACACGAATGGCTCTCAGTTCCTAGTCACCCTCGCGCCCCAG
CCGTGGTTGAACCACAAAGTGGTCGGGTTTGGCAGGGTCATCAAGGGCCT
GAAAGTGCTGCGAGAGATGAGCGAGGGGGAAACCCTTAACCAACGCCCGG
TGATGGAGTGCAAGGTTCACAAGTGCGGGCAGATCACTCCCGAAGACTTC
GCCAAATTTACCTGCAAGTAG
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