mRNA_Ecto-sp13_S_contig1930.6190.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: A0A6H5K260_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K260_9PHAE) HSP 1 Score: 783 bits (2021), Expect = 3.570e-274 Identity = 525/645 (81.40%), Postives = 531/645 (82.33%), Query Frame = 1
Query: 463 MSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRGIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALASASGVSXXXXXXXXXXXXXXXXXXXXXESATGNSGSSIGGSSSGGFSERECPEVGPVAAPVPARGEDGGEFVDGRTSPAATTSGDDSGSPLGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQHRGAKRAKCVLHPASGIAVVDAAAVGEPVTPMARPSTAGDVDMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPE----------EQLAKNPLLFNGSKFRLAGFSTEGDRKSSATA----TGTANAAGGAVSDTTDSCDXXXXXXXXXXXXXPLTNAARRRSRSPTSSSPRTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLQSLSTKAVSSRRKVGLQAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAELYAKGAKEAFESTGLRTVPGSEIVAEGVRGWFSKRGLGATPSFQGALELWRGHRLMGEGGDNDDG 2355
MSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRGIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALASA+GVS XXXXXXXXXXXXXXES SERECPEVGPVAAP PARGEDGG VDGR SPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGAKRAKCVLH ASG + DA AVGEPVTPMARPS AGD DMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPE EQLAKNPLLFNGSKFRLAGFSTEG+RKSSATA T TA+A XXXXXXXXXXXXX RSP SSSP TRKLRLRLGLTDYRTFRGTNWSPSAA LAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVL+SLSTK VSSRRKVG +AADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAA LYAKGAKEAFESTGLR VPGSEIVA SFQGALELWRGHRLMG GGDNDDG
Sbjct: 1 MSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRGIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALASAAGVSIATKPTAXXXXXXXXXXXXXXESXXXXXXXXXXXXXXXXISERECPEVGPVAAPGPARGEDGGGVVDGRRSPAVXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAKRAKCVLHSASGAVIADADAVGEPVTPMARPSAAGDGDMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEVEANIEVLWQEQLAKNPLLFNGSKFRLAGFSTEGNRKSSATAITTATATADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPMSSSPPTRKLRLRLGLTDYRTFRGTNWSPSAATLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLRSLSTKTVSSRRKVGQRAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAALYAKGAKEAFESTGLRAVPGSEIVAXXXXXXXXXXXXXXXXSFQGALELWRGHRLMGGGGDNDDG 641
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: D8LHN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN6_ECTSI) HSP 1 Score: 569 bits (1467), Expect = 1.170e-194 Identity = 323/372 (86.83%), Postives = 325/372 (87.37%), Query Frame = 1
Query: 1240 MARPSTAGDVDMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEEQLAKNPLLFNGSKFRLAGFSTEGDRKSSATATGTANAAGGAVSDTTDSCDXXXXXXXXXXXXXPLTNAARRRSRSPTSSSPRTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLQSLSTKAVSSRRKVGLQAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAELYAKGAKEAFESTGLRTVPGSEIVAEGVRGWFSKRGLGATPSFQGALELWRGHRLMGEGG-DNDD 2352
MARP AGD DMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPE LAKNPLLFNGSKF LAGFSTEGDRK SATAT TAN AGGAVSDTT XXXXXXXXXXXXX SRSPTSS P TRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVL+SLSTKAVSSRRKVG QAADELFDSAVQEVVDETNVPREALGEPLLSG+VRQGNSFGAPTAAFIIPCSLTRGEAA LYAKGAKEAFESTGLR VPG EIVA SFQGALELWRGHRLMG G DNDD
Sbjct: 1 MARPPAAGDGDMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEALLAKNPLLFNGSKFWLAGFSTEGDRKPSATATATANPAGGAVSDTTXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPTSSPP-TRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLRSLSTKAVSSRRKVGQQAADELFDSAVQEVVDETNVPREALGEPLLSGVVRQGNSFGAPTAAFIIPCSLTRGEAAALYAKGAKEAFESTGLRAVPGLEIVAXXXXXXXXXXXXXXXXSFQGALELWRGHRLMGGGXXDNDD 371
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: D8LHN5_ECTSI (Deacetylase sirtuin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN5_ECTSI) HSP 1 Score: 333 bits (854), Expect = 3.650e-105 Identity = 168/196 (85.71%), Postives = 171/196 (87.24%), Query Frame = 1
Query: 1 TGIPTFRGGSDSVWCVTAAAQGRRSVFRRDPLRWYNEFFLKHFPMSFTRKTPNAGHEALAALAREFPALRDKKGQGQEGVDNDREEQDGDDDGHDDDCCPYSFDKEIRPEDFTESVRATLTLDDDDAHTAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLT 588
+GIPTFRGGSDSVWCVTAAAQGRRSVFRRDPLRWYNEFFLKHFPMSFTRKTPNAGHE DK+GQGQEG DNDREE CCPYSFDKEIRPEDFTESVRATLTLDDDDAHTAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFY+FEKAEDWFKEADAVVFVGTSFAVTLT
Sbjct: 45 SGIPTFRGGSDSVWCVTAAAQGRRSVFRRDPLRWYNEFFLKHFPMSFTRKTPNAGHE-------------DKEGQGQEGADNDREEXXXXXXXXXXXCCPYSFDKEIRPEDFTESVRATLTLDDDDAHTAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLT 227
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: A0A835YSF7_9STRA (DHS-like NAD/FAD-binding domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF7_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.450e-40 Identity = 87/198 (43.94%), Postives = 113/198 (57.07%), Query Frame = 1
Query: 1 TGIPTFRGGSDSVWCVTAAAQGRRSVFRRDPLRWYNEFFLKHFPMSFTRKTPNAGHEALAALARE--FPALRDKKGQGQEGVDNDREEQDGDDDGHDDDCCPYSFDKEIRPEDFTESVRATLTLDDDDAHTAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLT 588
+GIPTFRG S SVW +T+ A+ RR RDP++WYNEF+L++FP +F PNAGHE R F L+ +EQ G GH C Y+ + I+ + F +++A L D +G LTE PRCPGCG ++PMSLLFDEDYDSHSFY + W + A+VFVGTSF VT+T
Sbjct: 36 SGIPTFRGTSSSVWAITSTAKARRQTLLRDPVKWYNEFWLRYFPENFMNCKPNAGHELAECHGRLGIFKCLQ--------------QEQSG---GH---RCTYAHSRPIKLQRFDAAMQAQLRHD-------PQKGRPAELTEAPRCPGCGAVAAPMSLLFDEDYDSHSFYRLPDIKSWLDASHALVFVGTSFTVTIT 206
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: A0A7S2CWY6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWY6_9STRA) HSP 1 Score: 145 bits (366), Expect = 4.140e-35 Identity = 89/238 (37.39%), Postives = 123/238 (51.68%), Query Frame = 1
Query: 64 GRRSVFRRDPLRWYNEFFLKHFPMSFTRKTPNAGHEALAALAREFPALRDKKGQGQEGVDNDREEQDGDDDGHD------------------DDCCPYSFDKEIRPEDFTESVRATLTLDDDDAHTAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRGIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPAL 723
G R+ F ++P RWYN+F+L +F TPN GHEALA L LR + +D + HD +D CPYS I P F+ +++ L H L + L ++P CP C P +LLFDEDY H FY+F++ ++W +EA+ VVFVGTSFAVTLT+LA+ EA+ R +P+F+FN+ +S P LD + G AE LP L
Sbjct: 2 GTRASFSKNPCRWYNDFWLPNFAPPRLAVTPNEGHEALARLCSTIDNLRVVT----QNIDALHQSTSTSWHSHDRLIEAHGRVGLYKCASDPEDGCPYSEHDSIGPGSFSTALQKQL------GHNVGKNKLPK-LRQVPLCPSCSNPCMPQALLFDEDYTDHEFYQFDRLQEWLEEAEVVVFVGTSFAVTLTTLAMDEARDRHLPIFNFNIDGEDRSKPTLDWSNIEGPAEVRLPEL 228
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: UPI00033166B3 (nucleoside diphosphate-linked moiety X motif 22 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00033166B3) HSP 1 Score: 139 bits (350), Expect = 6.710e-33 Identity = 108/304 (35.53%), Postives = 138/304 (45.39%), Query Frame = 1
Query: 1327 LRRDQVRVDVAEAYSRKPHPDPEE--------QLAKNPLLFNGSKFRLAGFSTEGDRKSSATATGTANAAGGAVSDTTDSCDXXXXXXXXXXXXXPLTNAARRRSRSPTSSSPRTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEA-AYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKL--GLTPEVLQSLSTKAVSSRRKVGLQAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAELYAKGAKEAFESTGL 2205
L +QVRV+++ A+ R+P P +E +L P LF+ KFRL E PT S+ L LRLGLT YR F GTNWS SAA L A D W + AYL+ LGVGA + T DGFL+ L RS VAE G++ PGGHPEP+ L G +P S + +G ELF S +QE+ DE N+P L +PLL G+ R S G +A F + CSLT + + Y G EA ESTG+
Sbjct: 16 LPEEQVRVELSPAHDRRPLPGGDEAISAIWESRLQTQPWLFDAPKFRLHSAVLE-----------------------------------------------------PTGSAGPL--LHLRLGLTSYRDFLGTNWSNSAACLQQQGAAD--WGDKQAYLADPLGVGAALATSDGFLVFLHRSRQVAEAPGLVDVPGGHPEPQALCPGNSP-----------SHKDFLGELVVHELFSSILQEICDEVNLPVLTLSQPLLLGIARNQTSAGRASAEFFVRCSLTSEQVRKYYLSGGPEAHESTGI 251
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: G1T969_RABIT (Nudix hydrolase 22 n=2 Tax=Oryctolagus cuniculus TaxID=9986 RepID=G1T969_RABIT) HSP 1 Score: 140 bits (353), Expect = 1.740e-32 Identity = 124/349 (35.53%), Postives = 161/349 (46.13%), Query Frame = 1
Query: 1327 LRRDQVRVDVAEAYSRKPHPDP--------EEQLAKNPLLFNGSKFRLAGFSTEGDRKSSATATGTANAAGGAVSDTTDSCDXXXXXXXXXXXXXPLTNAARRRSRSPTSSSPRTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEA-AYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKL--GLTPEVLQSLSTKAVSSRRKVGLQAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAELYAKGAKEAFESTGLRTVPGSEIVAEGVRGWF---SKRGLGATPSFQGALELWRGHRLMG 2331
L ++QVRV+++ A+ R+P P E +L P LF+ KFRL TAT TA P+ SR P +L LRLGLT YR F GTNW+ SAA L A D W + AYL+ LGVGAV+ T D FL+ L RS VAE G++ PGGHPEP+ L G +P+ + G ELF S +QE+ DE N+P L +PLL G+ R S G +A F + CSLT + E Y G EA ESTG+ I E R W ++ PS +GA+ L+ +RL G
Sbjct: 98 LPQEQVRVELSPAHDRRPLPGGDKAITAIWESRLQTQPWLFDAPKFRLH------------TATLTA----------------------------PMG------SREP--------ELLLRLGLTSYRDFLGTNWASSAAWLQQQGAAD--WGDRQAYLADPLGVGAVLATADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCPGDSPQ-----------HKDLPGELVVRELFSSVLQEICDEVNLPLSTLSQPLLLGIARNETSAGRASAEFHVQCSLTSEQVREYYLSGGPEAHESTGI-------IFVETQRVWRLQETEMWAELCPSAKGAILLY--NRLQG 370
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: UPI001C8A8ED9 (uridine diphosphate glucose pyrophosphatase NUDT22 isoform X1 n=2 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8A8ED9) HSP 1 Score: 139 bits (349), Expect = 2.340e-32 Identity = 112/355 (31.55%), Postives = 162/355 (45.63%), Query Frame = 1
Query: 1327 LRRDQVRVDVAEAYSRKPHPDPEEQL--------AKNPLLFNGSKFRLAGFSTEGDRKSSATATGTANAAGGAVSDTTDSCDXXXXXXXXXXXXXPLTNAARRRSRSPTSSSP--------------RTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLQSLSTKAVSSRRKVGLQAA--DELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAELYAKGAKEAFESTGLRTVPGSEIVAEGVRG--WFSKRGLGATPSFQGALELWR 2313
L +Q+ V++++ ++R+ P+ E+ + K P LFNG+KFRL + K A A A R RSP P R+ L LRLGLT Y+ + GTNWS A RL + R+ A+L+Q LGVGAVV T DG ++ L RS+ VAE G++ PGGHPEP+ L +S +A+ + G + A E+F S E+ DE NVP +L PLL G+ S G P+A F + C+LT E ++Y G EA EST + + +++ R W PS +GA+ L++
Sbjct: 17 LGENQIHVEISDRFNRQTFPEIEQHIEAVWSDRVTKEPWLFNGAKFRLHSAAISAVEKGPAAA-----------------------------------QAVREPERSPRGEGPQSADKPPAGPSRAERSCALTLRLGLTCYKDYLGTNWSREAERLQSHG-RNECADPQAFLAQPLGVGAVVATADGDIVLLRRSHKVAEAAGLLDIPGGHPEPKML------CPGVSEEAICAELLQGKERAVVSEIFSSVCAEISDEVNVPVGSLSRPLLMGVALNHTSAGRPSAEFYVRCALTTEEVRDVYRHGGPEAHESTEILFLSQTKVFQLNERSPLWSEM-----CPSAKGAVLLYQ 324
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: UPI001B7E56A9 (uridine diphosphate glucose pyrophosphatase NUDT22 n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E56A9) HSP 1 Score: 137 bits (345), Expect = 3.110e-32 Identity = 102/338 (30.18%), Postives = 149/338 (44.08%), Query Frame = 1
Query: 1327 LRRDQVRVDVAEAYSRKPHPDPEEQLA--------KNPLLFNGSKFRLAGFSTEGDRKSSATATGTANAAGGAVSDTTDSCDXXXXXXXXXXXXXPLTNAARRRSRSPTSSSPRTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPEKLGLTPEVLQSLSTKAVSSRRKVGLQAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAELYAKGAKEAFESTGLRTVPGSEIVA--EGVRGWFSKRGLGATPSFQGALELW 2310
L + QVRV+++ +R+ E+++A + P LFNG+KFR+ + EG+R L LRLGLT YR + GTNW+P A L A D+ +A YL++ LGVGA+V T D + L RS VAE G + PGGHPEP+ + + +++ R G E+F S + E+ DE N+P E+L PLL G+ R S G P+A F + C LT E E Y G EA EST + + +++ + GW PS +G ++L+
Sbjct: 17 LTQAQVRVEISSECNRRVLRGHEQKIAHIWQQRKQEKPWLFNGAKFRVHSATLEGER------------------------------------------------------------LLLRLGLTCYRDYLGTNWAPEAQLLQEQGATDYSDSQA-YLAEPLGVGAMVHTADDCFVFLRRSELVAEAAGQVDIPGGHPEPKAAA------KGVPEESIQPRHLSGELVVQEIFSSILGEIRDEVNIPLESLSRPLLLGIARNNRSAGRPSAEFYVRCKLTSEEVRERYRMGGPEAHESTSIIFIQREDVLKLEDAAEGWRE-----LCPSAKGGVKLY 282
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Match: UPI001888E2E7 (uridine diphosphate glucose pyrophosphatase NUDT22 n=1 Tax=Pungitius pungitius TaxID=134920 RepID=UPI001888E2E7) HSP 1 Score: 139 bits (350), Expect = 3.170e-32 Identity = 115/324 (35.49%), Postives = 159/324 (49.07%), Query Frame = 1
Query: 1300 LLEPALETPLRRDQVRVDVAEAYSRKPHPDPEEQL--------AKNPLLFNGSKFRLAGFSTEGDRKSSATATGTANAAGGAVSDTTDSCDXXXXXXXXXXXXXPLTN-AARRRSRSPTSSSPRTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEP----EKLGLTPEVLQSLSTKAVSSRRKVGLQAADELFDSAVQEVVDETNVPREALGEPLLSGLVRQGNSFGAPTAAFIIPCSLTRGEAAELYAKGAKEAFESTGLRTVPGSEIV 2232
LL A + L QV+ +++E+++R+ P E Q+ +K P LFNGSKFRL F R +S+ + + A+SD + D + N + P S L LRLGLT Y+ F GTNWS AA L + +A L+Q LGVG V+ T DG ++ + RS VAE G++ PGGHPEP E+LG V + + RR V ELF S E+ DE NVP +LG P+L G+ S G P+A F + CSLT E +LY KG EA EST + + +E++
Sbjct: 8 LLHCAAWSGLLESQVQAELSESFNRQTDPTVEHQIEEVWTERVSKEPWLFNGSKFRLHSF-----RLASSPSASPKHPPHVALSDRAEPRDGELKRSEEENRCIIIANQSGSYEGNGPVKSQ--NPLLTLRLGLTCYKDFLGTNWSRGAAALRQRGEVEFGDPQA-LLAQPLGVGGVLCTDDGQVVFIRRSQRVAEAGGLLDIPGGHPEPKAVCERLGR--RVREEQIGVHMMQRRAV----VSELFSSVCAEIRDEVNVPLSSLGAPVLMGVALNHTSAGRPSAEFYVSCSLTSEEVTQLYRKGGAEASESTEIIFLCKTEVL 317 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1930.6190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1930.6190.1 >prot_Ecto-sp13_S_contig1930.6190.1 ID=prot_Ecto-sp13_S_contig1930.6190.1|Name=mRNA_Ecto-sp13_S_contig1930.6190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=742bp MSFTRKTPNAGHEALAALAREFPALRDKKGQGQEGVDNDREEQDGDDDGHback to top mRNA from alignment at Ecto-sp13_S_contig1930:1044..7870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1930.6190.1 ID=mRNA_Ecto-sp13_S_contig1930.6190.1|Name=mRNA_Ecto-sp13_S_contig1930.6190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6827bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1930:1044..7870+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1930:1044..7870+ >mRNA_Ecto-sp13_S_contig1930.6190.1 ID=mRNA_Ecto-sp13_S_contig1930.6190.1|Name=mRNA_Ecto-sp13_S_contig1930.6190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2226bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1930:1044..7870+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |