mRNA_Ecto-sp13_S_contig193.6188.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig193.6188.1
Unique NamemRNA_Ecto-sp13_S_contig193.6188.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI)

HSP 1 Score: 592 bits (1526), Expect = 1.270e-190
Identity = 301/304 (99.01%), Postives = 304/304 (100.00%), Query Frame = 1 
Query:    4 QELERMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEK 915
            QELERMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVE+DRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGI+GVEFN+EETQIIAMLSSAGEK
Sbjct:  583 QELERMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEIDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIHGVEFNKEETQIIAMLSSAGEK 886
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A836CKQ4_9STRA (Dynein heavy chain, N-terminal region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKQ4_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 1.830e-140
Identity = 230/311 (73.95%), Postives = 264/311 (84.89%), Query Frame = 1 
Query:    1 MQELERMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLS--AMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHE-ENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            +QELE++++  P LK+CRGEPFKEEHW ALLQGKLGLDRSVRLENL + HF++  A+D+LAD +L+QFVKHLQ+RAQGEVTIREALQELVAWSQT+ELKL  HE + GR T LIRDW ++FLELGDKQSLLASLKESQFFKAF+D G TYE+KL +LD         QR+WVYLEPIFG GALPAE  RFRRV+E+FRDIMAKV  D +LFSLADE LFP L   L ASLDQLERCQKAL+DFLE+KRSA+PRFYFIGD+DLLEILGQA+NP +IQ HLKKLFQGI+ VEFNE+ TQI+AMLSSAGE   L
Sbjct:  137 LQELEKIKRVMPCLKHCRGEPFKEEHWGALLQGKLGLDRSVRLENLTLGHFITGPALDKLADASLVQFVKHLQARAQGEVTIREALQELVAWSQTSELKLTAHERDGGRATALIRDWKELFLELGDKQSLLASLKESQFFKAFQDTGATYELKLALLD---------QRRWVYLEPIFGRGALPAEAARFRRVDEDFRDIMAKVAADPKLFSLADEHLFPGLATTLSASLDQLERCQKALADFLEQKRSALPRFYFIGDDDLLEILGQARNPAVIQEHLKKLFQGIHRVEFNEDHTQIVAMLSSAGEVVRL 438
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A482S5L2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5L2_9ARCH)

HSP 1 Score: 388 bits (996), Expect = 1.820e-128
Identity = 192/306 (62.75%), Postives = 239/306 (78.10%), Query Frame = 1 
Query:    7 ELERMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            ++ER++K+ P LKYC+ + FKE+HW+ LLQGKL + + +R+E L V HFLS ++ L +PA L FVK+LQ+RA GEV IREA+QEL AW  +AELK +  +E+GR+ PLI++W D+FLE+GDKQSLL SLKES FFKAF D G+  E K+  LD+ LHTLN IQR+WVYLEPIF  GALPAE+ RF+RV+E F+DIM  V  D +LF LADEQ FP L   L   LDQLERCQKAL++FLE KRSAMPRFYFIGD+DLLEILGQAKNP +IQ+HLKKLFQGI+ V+F+ +   I AM+SSA E   L
Sbjct:   80 KVERIKKSVPALKYCKSDAFKEDHWTELLQGKLQMSKELRVEKLKVEHFLSRLEILMEPATLSFVKNLQARALGEVQIREAMQELRAWELSAELKFLTQDESGRQVPLIKEWKDLFLEIGDKQSLLGSLKESPFFKAFADVGLALEAKMTSLDFILHTLNSIQRRWVYLEPIFSRGALPAEESRFKRVDESFKDIMITVVRDPKLFYLADEQYFPKLPDNLRHMLDQLERCQKALTEFLEAKRSAMPRFYFIGDDDLLEILGQAKNPAVIQSHLKKLFQGIHKVKFSSDFKSITAMISSANEVVDL 385
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A2P4WW42_9STRA (Dynein heavy chain (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WW42_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 2.330e-123
Identity = 196/302 (64.90%), Postives = 238/302 (78.81%), Query Frame = 1 
Query:   19 MRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            +++A PTLK CRGEPFK++HW+ L + KLG  R V  +NL+V HF+     L  PA LQFVK L +RAQGEVTIR+ALQEL AW++TAEL L+ HE +GRR  +I+DW D+ L LGD QSLLASLKESQFFK FE +   YE+K+  LD  L  LN IQRKWV+LEPIF  GALP+EQ RFRRV+EEF DIM  VE D +LF+L+DE +FP L  +L   +DQLERCQKAL+DFLEEKRS MPRFYFIGDEDLLEILGQA+NP +IQ+HLKKL+QG+Y VEF+E++ QI+AMLSSAGE+  L
Sbjct:   86 VKRAMPTLKLCRGEPFKDDHWTQLFR-KLGFPRGVEKQNLIVQHFMDVFPVLELPATLQFVKVLHARAQGEVTIRDALQELRAWTETAELALLLHEHDGRRVAIIKDWKDLTLALGDNQSLLASLKESQFFKPFEVEASQYEIKMSTLDQVLTQLNLIQRKWVFLEPIFSKGALPSEQSRFRRVDEEFTDIMGAVERDPKLFNLSDELMFPQLVERLTTMVDQLERCQKALADFLEEKRSRMPRFYFIGDEDLLEILGQAQNPAVIQSHLKKLYQGVYRVEFSEQQDQIVAMLSSAGERVEL 386
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A3F2RUL8_9STRA (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RUL8_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 1.670e-122
Identity = 200/302 (66.23%), Postives = 240/302 (79.47%), Query Frame = 1 
Query:   19 MRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            +++  PTLK CRGEPFK++HW+ L + KLG  R V   NL V+HF+     L  PA LQF+K L +RAQGEVTIREALQEL AW++TAEL L+ HE +GRR  +I+DW D+ L LGD QSLLASLKESQFFK FE + I YE+K+G LD AL  LN IQRKWV+LEPIF  GALP+EQ RFRRV+EEF DIMA VE D +LF+LADE LFP L  +L   +DQLERCQKAL+DFLEEKRS MPRFYFIGDEDLLEILGQ++NP +IQ+HLKKL+QG+Y VEF+E++ QI+AMLSSAGE+  L
Sbjct: 1277 VKRVMPTLKLCRGEPFKDDHWTQLFR-KLGFPRGVEKHNLTVAHFMDVFPVLELPATLQFIKVLHARAQGEVTIREALQELRAWTETAELALLAHEHDGRRVAIIKDWKDLTLALGDNQSLLASLKESQFFKPFEGEAIQYEIKMGTLDQALTQLNLIQRKWVFLEPIFSKGALPSEQSRFRRVDEEFTDIMATVERDPKLFNLADELLFPQLVERLTTMVDQLERCQKALADFLEEKRSRMPRFYFIGDEDLLEILGQSQNPAVIQSHLKKLYQGVYRVEFSEKQDQIVAMLSSAGERVML 1577
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A2D4BHB6_PYTIN (Dynein heavy chain (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHB6_PYTIN)

HSP 1 Score: 390 bits (1001), Expect = 3.110e-122
Identity = 197/303 (65.02%), Postives = 238/303 (78.55%), Query Frame = 1 
Query:   16 RMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            R+++A PTLK CRGEPFK++HW+ L + KLGL R V   NL + HFL  ++ L  PA LQFVK L +RAQGEVTIREALQEL AW++TAEL L+ HE +GRR  +I DW ++ L LGD QSLLASLKESQFFK FE +   YEVK+ +LD AL  LN IQRKWV+LEPIF  GALPAEQ RFRRV++EF DIM  VE + +LF+LADE LFP L  +L   +DQLERCQKAL+DFLEEKR+ MPRFYF+GDEDLLEILGQ++NP +IQ+HLKKL+QG+Y VEF+E    I+AMLSSAGE+  L
Sbjct:  993 RVKRAMPTLKLCRGEPFKDDHWTQLFR-KLGLPRGVEKRNLTLGHFLDVLEVLEVPATLQFVKVLHARAQGEVTIREALQELRAWTETAELALLPHEHDGRRVAIIXDWKEILLALGDNQSLLASLKESQFFKPFEGEASQYEVKMTLLDQALAQLNVIQRKWVFLEPIFAKGALPAEQSRFRRVDDEFVDIMRTVEREPKLFNLADEMLFPQLLERLAMMVDQLERCQKALADFLEEKRARMPRFYFLGDEDLLEILGQSQNPAVIQSHLKKLYQGVYRVEFSEARDAIVAMLSSAGERVEL 1294
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A662XLI3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLI3_9STRA)

HSP 1 Score: 394 bits (1013), Expect = 1.050e-121
Identity = 198/302 (65.56%), Postives = 241/302 (79.80%), Query Frame = 1 
Query:   19 MRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            +++A PTLK CRGEPFK++HW+ L + KLGL R V  +NL V+HFL     L  PA LQFVK L +RAQGEVTIR+ALQEL AW++TAEL L+ HE +GRR  +I+DW D+ L LGD QSLLASLKESQFFK FE + + YE K+  LD AL  LN IQRKWV+LEPIF  GALPAEQ RFRRV+EEF DIMA VE D +LF+LAD+ +FP L  +L   +DQLERCQKAL+DFLE+KRS MPRFYFIGDEDLLEILGQ++NP +IQ+HLKKL+QG+Y VEF+E + QI+AMLS++GE+ SL
Sbjct:  728 VKRAMPTLKLCRGEPFKDDHWTQLFR-KLGLPRGVEKQNLTVAHFLDVFPALELPATLQFVKVLHARAQGEVTIRDALQELRAWTETAELALLVHEHDGRRVSIIKDWKDLTLALGDNQSLLASLKESQFFKPFEGEALQYEAKMSTLDQALTQLNLIQRKWVFLEPIFAKGALPAEQARFRRVDEEFTDIMAAVERDPKLFNLADDMVFPQLVERLATLVDQLERCQKALADFLEDKRSRMPRFYFIGDEDLLEILGQSQNPAVIQSHLKKLYQGVYRVEFSETQEQIVAMLSASGERVSL 1028
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A662WYV0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYV0_9STRA)

HSP 1 Score: 392 bits (1008), Expect = 4.980e-121
Identity = 197/302 (65.23%), Postives = 241/302 (79.80%), Query Frame = 1 
Query:   19 MRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            +++A PTLK CRGEPFK++HW+ L + KLGL R V  +NL V+HFL  +  L  PA LQFVK L +RAQGEV IR+ALQEL AW++TAEL L+ HE +GRR  +I+DW D+ L LGD QSLLASLKESQFFK FE + + YE K+  LD AL  LN IQRKWV+LEPIF  GALPAEQ RFRRV+EEF DIMA VE D +LF+LAD+ +FP L  +L   +DQLERCQKAL+DFLE+KRS MPRFYFIGDEDLLEILGQ++NP +IQ+HLKKL+QG+Y VEF+E + QI+AMLS+AGE+ +L
Sbjct: 1260 VKRAMPTLKLCRGEPFKDDHWTQLFR-KLGLPRGVEKQNLTVAHFLGVLPALELPATLQFVKVLHARAQGEVMIRDALQELRAWTETAELALLVHEHDGRRVAIIKDWKDLTLALGDNQSLLASLKESQFFKPFEGEALQYEAKMSTLDQALSQLNLIQRKWVFLEPIFAKGALPAEQARFRRVDEEFTDIMAAVERDPKLFNLADDLVFPQLVERLATLVDQLERCQKALADFLEDKRSRMPRFYFIGDEDLLEILGQSQNPAVIQSHLKKLYQGVYRVEFSETQEQIVAMLSAAGERVAL 1560
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BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A329S636_9STRA (Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S636_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 3.180e-120
Identity = 197/302 (65.23%), Postives = 237/302 (78.48%), Query Frame = 1 
Query:   19 MRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            +++A PTLK CRGEPFK++HW+ L + KLG  R V   NL+V HF+     L  PA LQFVK L +RAQGEVTIR+ALQEL AW++TAEL L+ HE +GRR  +I+DW D+ L LGD QSLLASLKESQFFK FE +   YE+K+  LD  L  LN IQRKWV+LEPIF  GALP+EQ RFRRV+EEF DIM  VE D +LF+LADE +FP L  +L   +DQLERCQKAL+DFLEEKRS MPRFYFIGDEDLLEILGQA+NP +IQ+HLKKL+QG+Y VEF+E++ QI+AMLSSAGE+  L
Sbjct: 1266 VKRAMPTLKLCRGEPFKDDHWTQLFR-KLGFPRGVEKNNLIVQHFIDVFPLLELPATLQFVKVLHARAQGEVTIRDALQELRAWTETAELALLAHEHDGRRVAIIKDWKDLTLALGDNQSLLASLKESQFFKPFEVEASQYEIKMSTLDQVLTHLNIIQRKWVFLEPIFSKGALPSEQSRFRRVDEEFTDIMGSVERDPKLFNLADELMFPQLVERLTTMVDQLERCQKALADFLEEKRSRMPRFYFIGDEDLLEILGQAQNPAVIQSHLKKLYQGVYRVEFSEKQDQIVAMLSSAGERVEL 1566
[Close]
BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Match: A0A8J2SHJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHJ0_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 4.360e-120
Identity = 190/306 (62.09%), Postives = 244/306 (79.74%), Query Frame = 1 
Query:    7 ELERMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSHFLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVDHEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVKLGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAKVEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPRFYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLSSAGEKASL 924
            +LER++ A  TLKYC G+ FK+EHWSALLQGKLGL + +RLE+L V HF++A+D++ +PALL FVK LQ++AQGEV +R+ALQEL  WSQTAEL LV+++E GR+T L++DWG +FL+LGDKQSLL+SLKESQF++AFE  G +YE K+  LD+ LH LN +QRKWVYLEPIF  G LP E  RFR V+E+FR+IM  VE+D++LF+L D  +  D++  L   L+QLE CQKAL +FLEEKR+  PRFYFIGD+DLLEILGQA+NP +IQAHLKKLFQG   V FN+  T+I +M+S+AGE   L
Sbjct: 1202 QLERIKAAATTLKYCHGKDFKDEHWSALLQGKLGLGKEIRLESLTVGHFVAALDKVLEPALLVFVKELQAQAQGEVLVRDALQELSVWSQTAELSLVEYKEQGRKTMLVKDWGRMFLDLGDKQSLLSSLKESQFYRAFESIGASYETKMSNLDFVLHALNTVQRKWVYLEPIFARGGLPNESKRFRGVDEDFREIMCLVEVDQKLFNLVDPHVHHDIKRTLQTMLEQLEWCQKALCNFLEEKRAKFPRFYFIGDDDLLEILGQAQNPAVIQAHLKKLFQGTTTVRFNKTMTKIQSMVSAAGEVVDL 1507
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig193.6188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN02_ECTSI1.270e-19099.01Dynein heavy chain dynein heavy chain n=1 Tax=Ecto... [more]
A0A836CKQ4_9STRA1.830e-14073.95Dynein heavy chain, N-terminal region 2-domain-con... [more]
A0A482S5L2_9ARCH1.820e-12862.75Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2P4WW42_9STRA2.330e-12364.90Dynein heavy chain (Fragment) n=1 Tax=Phytophthora... [more]
A0A3F2RUL8_9STRA1.670e-12266.23Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A2D4BHB6_PYTIN3.110e-12265.02Dynein heavy chain (Fragment) n=1 Tax=Pythium insi... [more]
A0A662XLI3_9STRA1.050e-12165.56Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662WYV0_9STRA4.980e-12165.23Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A329S636_9STRA3.180e-12065.23Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Phytoph... [more]
A0A8J2SHJ0_9STRA4.360e-12062.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig193contigEcto-sp13_S_contig193:8591..12014 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score595.5
Seed ortholog evalue1.4e-167
Seed eggNOG ortholog2880.D8LN02
Preferred nameDYNC2H1
Model size936
KEGG koko:K05636,ko:K10414
KEGG Pathwayko04145,ko04151,ko04510,ko04512,ko04962,ko05132,ko05145,ko05146,ko05165,ko05200,ko05222,map04145,map04151,map04510,map04512,map04962,map05132,map05145,map05146,map05165,map05200,map05222
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001568,GO:0001578,GO:0001944,GO:0002119,GO:0002164,GO:0003002,GO:0003008,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005858,GO:0005868,GO:0005874,GO:0005875,GO:0005929,GO:0005930,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007030,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0007600,GO:0007605,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0007626,GO:0007628,GO:0007635,GO:0007638,GO:0008049,GO:0008104,GO:0008150,GO:0008152,GO:0008344,GO:0008569,GO:0008589,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009799,GO:0009855,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010256,GO:0010467,GO:0010646,GO:0010647,GO:0010648,GO:0010970,GO:0010996,GO:0012505,GO:0015630,GO:0016043,GO:0016462,GO:0016485,GO:0016545,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017015,GO:0017111,GO:0019098,GO:0019538,GO:0019953,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022414,GO:0022607,GO:0022611,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030286,GO:0030326,GO:0030512,GO:0030534,GO:0030705,GO:0030900,GO:0030990,GO:0031223,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035082,GO:0035107,GO:0035108,GO:0035113,GO:0035721,GO:0035735,GO:0036156,GO:0036159,GO:0040024,GO:0042073,GO:0042221,GO:0042623,GO:0042995,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044458,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045177,GO:0045184,GO:0045433,GO:0045503,GO:0045505,GO:0045880,GO:0046907,GO:0048065,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048609,GO:0048699,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051959,GO:0055115,GO:0060173,GO:0060179,GO:0060271,GO:0060322,GO:0060976,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061512,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0072358,GO:0072359,GO:0072594,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090659,GO:0097014,GO:0097542,GO:0097730,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902494,GO:1903844,GO:1903845,GO:1905515,GO:1990939,GO:2000026
Exons7
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
Cds size936
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04516,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig193.6188.1prot_Ecto-sp13_S_contig193.6188.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig193 8591..12014 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462982.103239-CDS-Ecto-sp13_S_contig193:8590..86861681462982.103239-CDS-Ecto-sp13_S_contig193:8590..8686Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig193 8591..8686 +
1681462982.1139534-CDS-Ecto-sp13_S_contig193:9503..96381681462982.1139534-CDS-Ecto-sp13_S_contig193:9503..9638Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig193 9504..9638 +
1681462982.1227973-CDS-Ecto-sp13_S_contig193:9944..101571681462982.1227973-CDS-Ecto-sp13_S_contig193:9944..10157Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig193 9945..10157 +
1681462982.1306345-CDS-Ecto-sp13_S_contig193:10544..107001681462982.1306345-CDS-Ecto-sp13_S_contig193:10544..10700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig193 10545..10700 +
1681462982.1396322-CDS-Ecto-sp13_S_contig193:11060..111551681462982.1396322-CDS-Ecto-sp13_S_contig193:11060..11155Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig193 11061..11155 +
1681462982.1476886-CDS-Ecto-sp13_S_contig193:11513..116131681462982.1476886-CDS-Ecto-sp13_S_contig193:11513..11613Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig193 11514..11613 +
1681462982.1557753-CDS-Ecto-sp13_S_contig193:11873..120141681462982.1557753-CDS-Ecto-sp13_S_contig193:11873..12014Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig193 11874..12014 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig193.6188.1

>prot_Ecto-sp13_S_contig193.6188.1 ID=prot_Ecto-sp13_S_contig193.6188.1|Name=mRNA_Ecto-sp13_S_contig193.6188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MQELERMRKATPTLKYCRGEPFKEEHWSALLQGKLGLDRSVRLENLMVSH
FLSAMDRLADPALLQFVKHLQSRAQGEVTIREALQELVAWSQTAELKLVD
HEENGRRTPLIRDWGDVFLELGDKQSLLASLKESQFFKAFEDQGITYEVK
LGVLDYALHTLNQIQRKWVYLEPIFGMGALPAEQGRFRRVEEEFRDIMAK
VEMDRRLFSLADEQLFPDLRGQLGASLDQLERCQKALSDFLEEKRSAMPR
FYFIGDEDLLEILGQAKNPTIIQAHLKKLFQGIYGVEFNEEETQIIAMLS
SAGEKASLSLF*
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mRNA from alignment at Ecto-sp13_S_contig193:8591..12014+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig193.6188.1 ID=mRNA_Ecto-sp13_S_contig193.6188.1|Name=mRNA_Ecto-sp13_S_contig193.6188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3424bp|location=Sequence derived from alignment at Ecto-sp13_S_contig193:8591..12014+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGGAGCTCGAGCGAATGAGAAAGGCGACACCCACGCTAAAATACTG
CCGAGGCGAGCCTTTCAAGGAGGAGCATTGGAGCGCACTCTTGCAGGTGC
CGTGAAATCCCGGTTTCAAGTTTCAAGGGCCGCGGAGGGTAGCTCGCTCC
TTGTAGGCTATTGGCGTGGCGTCCTGGTTGCTGGTGGATAAACATAATTA
TTTTTGAGTCGGAAAAGACAAACACAGACATCACTTGTGTACTAAAACCC
ACAAACTTTGAGTGTTTCAGGCATGCTCTCCCGCGTACGAAGGAGGGTTG
GAGCGCACTACACCGCTCTGTCATCACGTGCTTACCCCTCCGTTGCAAGC
GTTTTGGGCTCCATAACAACAACGTAGGACACTACCATACAACATCTGGC
GTACCAGCTATATATGGGCTTCAAGAACGCGTGCGTGTCCTGACGATTTC
GGTCTGGTGCGCTTTCCGGGGTTCGTTGCCCGAGTTTGATGGACGGTACC
CTCGATGCCCCTAATAGTGTACTCCTATCTGTAAAATCGAGAACAACGTA
GATTTTCCGCCGAAAATCAGTTTTGGATTGAGCGTTTGCGTAAGACCTTA
GGGTTAGTCTTTGGAGACAATCGTTCAAGTGAAACAAGACCCCGCACGGA
CGTGTGAATACCCGGCAGCCAGCAGTTGAGACCTTCTGGTGGAATGCTCT
GGCTGGGTATATGATCACTGCTTCTCAAAACGTCGGGTTGTGGATCGCAC
AGGTTGTCGAACGTCTCCGGCAGCAGGCCTTTTCCGTACGCAATGGGTCC
CAGCACCCCCTCCTACCTTGAAAGAAAGTCAAAGTTGCACTATGCGTTCG
GAAACATGCCGTGTATCCTTCATTCTCGCCCGCCCAACAACCAATGCGGT
TTGTCTTCCGTAGGGGAAGCTTGGCCTAGACCGCAGCGTGCGTCTGGAGA
ACCTCATGGTCAGCCACTTTTTGTCGGCGATGGACCGCTTGGCGGACCCG
GCTCTGCTGCAGTTCGTCAAGCATCTGCAGTCAAGGGCACAGGGAGAGGT
GGGCACAGCAGTTATCTCTCCGCTCTGATCGTAAAAGGTCATCGACATTA
TTGCTGAAAAGTCATGCGCCACGTGGTTAGAACACTGCTAACAGCGTTCG
GATTTCTAGTGGTTAGAAGTCGCGCTTGTGAGGGCGGTGATTACATCATC
TATTGCATGGAATGTAGCGCGCGGTCGGGTGTTTTTGATGGAAACGCACT
TCGTCACGCCCCCTGTGATTGACGGTCAGGGGAAGTGTCGGTCATTTCAG
CGGGGTGTTAATATTCCGAACCCTCTCTTTCGAAATTCTTTTCGCAACAC
GAAGGTCACCATCCGTGAGGCTCTCCAAGAGCTGGTGGCATGGTCCCAGA
CCGCCGAGCTCAAGCTGGTCGATCACGAGGAGAACGGCCGGAGGACCCCG
CTCATCCGCGACTGGGGCGACGTCTTTCTCGAGCTGGGCGACAAGCAGAG
CCTGTTGGCGTCCCTGAAAGAGAGCCAGTTCTTCAAGGCCTTCGAAGACC
AGGGGATCACGTACGAGGTGCGCGTATCCGCGATCATGGTACCGAACGCG
CCCTAGCTTGTTTACGACACCACCACGAATGCCAGAAATTAGAGCTACCG
GTACCCTTTCAAAGGTACCGTCGTAAGATGTGCCTTGCCGGGTTTTGGGA
ATAGCTCCAATCAACGTTTGGAGGGCGCCCTAATAATAGATGCTTCGAAA
GCGAGTGACAATGTTTCAAAAGCCTCGCAGGCGGGGGGAAGTCACAAGGC
GAAACGAGCATGGAAGCACTTCGCATGTGCCAAGGAACTTAGGTCAGGGT
GCACGGGTTGACATATTCACAGGATTCTTCTTCTAGTCCGCCAGAATCGT
TTTTCGTGGTGGCCGCACACATTTTTGTATTCCGCATTGCTGTCCGTTCC
GCAGGTAAAGCTTGGCGTGTTGGACTACGCCCTGCACACCTTGAACCAGA
TCCAGAGAAAGTGGGTGTACCTCGAGCCAATTTTTGGGATGGGCGCCTTG
CCGGCGGAGCAGGGACGTTTCCGCCGCGTTGAGGAAGAGTTCCGTGACAT
CATGGCCAAGGTTGGTGTATGCCGCCAGGTTGAATGCCTACATGAATGGT
CCCTGACAACTCGTGAGTCGCCTCCTGGAGGCTGTACGAGCGACAATCGG
CATTTGTACGGCATTTCCTTTTTCATAGGCCTGAATTGTCTGAGATAAGG
TCCAGGGTCCGCCGCCGCATCACACATGCAGCCACAGGCTCTTCCAACAA
ACAGCCCCAACCCTGGAAAAGCAAGTTTCAGTTTGTTTTTTTCATTTTCT
GGAAGGATTCTTTTCAAGAAACCCACATATATTTGCCAACGCCCCTCTCT
CGCATGCTGCATCACCTACCGCCCACATCTCTTGCCACCGAATGTGGCCG
TTCATTCGGTGTTCAACCAGGTCGAGATGGACCGTCGCCTGTTCTCGTTG
GCGGACGAACAGCTTTTCCCCGATCTCCGCGGGCAGCTGGGCGCGTCCCT
GGATCAGTTGGAGAGGTGGGTTCACAGTGAGACTCCGCTGTCGCACGTGC
TGATGCCTGGTCTCTTGGGCACTTCGTGCGCGACGAATCGGGGTGAAAAC
GGAATGCTCAAGGTCATACTTTCTCACTTCCGTCGAGTCCTCTTCGCCTC
GACAAGCGCTGGAGAGGCGTTGATAGACCAAAACGCAAGTTGCTCGATGT
TTTTAAGCTTCGCAACACAACCCCACTTGCAAATAACATTTGATTTTTCT
CCTATATATATAGATTCCCTTTTGTGGCCCATAGTTTGCACGCCGTAGAA
TGGACTAGAACGCCCCGAATCTACAGACTGCTGGTGATTGCCGTAACTGT
AATCATATTATCGCACGAAACAGGTGCCAGAAAGCCTTGTCCGACTTCTT
GGAGGAGAAGAGGTCGGCCATGCCAAGGTTCTACTTTATTGGGGACGAGG
ACTTGCTAGAGATTCTAGGACAGGTGAGGAAGCGAAAACTCTCTCATCAC
ACCTTTCTCATTTCCAGCCAAACATTTCAAGCGCCACCACCACCGGTCGC
CGGTATGATGGGGTCGTTGCGGGCAGAAGCCGCTCGCTGCAACCAACTGT
TCGACCGCGTCAAATCAGAAACTAACGGTAACAAACCGAACCACAGTACG
GCTGGCCAATGTGGCAATGTGCCTTGTCAAGCAAGCCCATCGACCATACC
GTATCGGGACCACCTTCCCCCTGTCTCGTTTAGGCGAAGAACCCGACGAT
CATCCAGGCTCACCTCAAGAAGCTTTTCCAGGGAATTTATGGCGTGGAGT
TCAATGAGGAAGAGACGCAGATCATCGCTATGCTCAGTTCCGCCGGGGAA
AAGGCAAGTCTCTCGCTCTTTTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig193:8591..12014+

>mRNA_Ecto-sp13_S_contig193.6188.1 ID=mRNA_Ecto-sp13_S_contig193.6188.1|Name=mRNA_Ecto-sp13_S_contig193.6188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=936bp|location=Sequence derived from alignment at Ecto-sp13_S_contig193:8591..12014+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGGAGCTCGAGCGAATGAGAAAGGCGACACCCACGCTAAAATACTG
CCGAGGCGAGCCTTTCAAGGAGGAGCATTGGAGCGCACTCTTGCAGGGGA
AGCTTGGCCTAGACCGCAGCGTGCGTCTGGAGAACCTCATGGTCAGCCAC
TTTTTGTCGGCGATGGACCGCTTGGCGGACCCGGCTCTGCTGCAGTTCGT
CAAGCATCTGCAGTCAAGGGCACAGGGAGAGGTCACCATCCGTGAGGCTC
TCCAAGAGCTGGTGGCATGGTCCCAGACCGCCGAGCTCAAGCTGGTCGAT
CACGAGGAGAACGGCCGGAGGACCCCGCTCATCCGCGACTGGGGCGACGT
CTTTCTCGAGCTGGGCGACAAGCAGAGCCTGTTGGCGTCCCTGAAAGAGA
GCCAGTTCTTCAAGGCCTTCGAAGACCAGGGGATCACGTACGAGGTAAAG
CTTGGCGTGTTGGACTACGCCCTGCACACCTTGAACCAGATCCAGAGAAA
GTGGGTGTACCTCGAGCCAATTTTTGGGATGGGCGCCTTGCCGGCGGAGC
AGGGACGTTTCCGCCGCGTTGAGGAAGAGTTCCGTGACATCATGGCCAAG
GTCGAGATGGACCGTCGCCTGTTCTCGTTGGCGGACGAACAGCTTTTCCC
CGATCTCCGCGGGCAGCTGGGCGCGTCCCTGGATCAGTTGGAGAGGTGCC
AGAAAGCCTTGTCCGACTTCTTGGAGGAGAAGAGGTCGGCCATGCCAAGG
TTCTACTTTATTGGGGACGAGGACTTGCTAGAGATTCTAGGACAGGCGAA
GAACCCGACGATCATCCAGGCTCACCTCAAGAAGCTTTTCCAGGGAATTT
ATGGCGTGGAGTTCAATGAGGAAGAGACGCAGATCATCGCTATGCTCAGT
TCCGCCGGGGAAAAGGCAAGTCTCTCGCTCTTTTAG
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