mRNA_Ecto-sp13_S_contig1926.6168.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1926.6168.1
Unique NamemRNA_Ecto-sp13_S_contig1926.6168.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A6H5JD73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD73_9PHAE)

HSP 1 Score: 718 bits (1854), Expect = 4.500e-256
Identity = 378/399 (94.74%), Postives = 386/399 (96.74%), Query Frame = 3
Query:  453 NKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKADALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLLT 1649
             +WDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRF PKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKV+PEVVLTLSMVLLLVATADRTFRKGIKAFKKES++QAKELGGTAD KVSSAAAIS DKSHTTLLGNGTKSYGA NGVEDGKGTFTP VLAPSSTPAAIAAGDVETPEEAMMIPTTAPV+P GTSDLS SEKADALQLLLDEE+HTSLAKVGIMTA+FVVLL VNLLKGGGAFDSPVGIVCGSFSFWATSVLSF YLVGVS +VRRYLVKRWVLKAEVGFEY EGDVEWTPLNTIRYPCICFFAGF AGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLLT
Sbjct:   31 TRWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFSPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVLPEVVLTLSMVLLLVATADRTFRKGIKAFKKESSVQAKELGGTADAKVSSAAAISKDKSHTTLLGNGTKSYGAANGVEDGKGTFTPTVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVTPVGTSDLSSSEKADALQLLLDEEQHTSLAKVGIMTAVFVVLLIVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFAYLVGVSLFVRRYLVKRWVLKAEVGFEYVEGDVEWTPLNTIRYPCICFFAGFVAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLLT 429          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A835ZGS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS5_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 2.780e-133
Identity = 234/430 (54.42%), Postives = 281/430 (65.35%), Query Frame = 3
Query:  384 FGDEGIEFPSPEERGWHKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGD-VETPEEAMMIPTTAPVSPAGTSDLSPSEKADA--------LQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
              DE I  P    +  HKKLLP + WD A +  A  GLMIAA GGIGGGGILVPIF+L++RF PKYA+PLSNITIFGGAITN  LN+ KRHPLADRPLVDWDLILVMEPLTIGGALVGSFI KV+PE +L LS+V+LL  TA RT +KG   + KES   A++      GK+S    + + ++   +              E+G         A  ST A +  GD VE                 G  D   +  A+         LQ LL+EER T   KV I++ +FVV+L VN+LKGGGAF SP+GI CGSF FW  SV   V++ G S +VR  LV +W LK + G+ Y EGDV+W+P  TI+YP +CFFAGF AG+FGVGGGIVKGPLMLEMGVHP V+S+TSA MILFTSFTATTSF+VFGLL
Sbjct:   53 LADEPIALPG---QSHHKKLLPLDAWDKAGIFAAIIGLMIAAGGGIGGGGILVPIFVLIMRFHPKYAIPLSNITIFGGAITNVALNLSKRHPLADRPLVDWDLILVMEPLTIGGALVGSFINKVLPEEILALSLVILLTLTAHRTLKKGASMYAKESRAMAQQAKA---GKMSELTTLHEAQAEELVE-------------EEGVSLLPKGRAAEDSTAAHLPTGDYVE----------------GGYDDTEQASMAEEEARRTHLQLQKLLEEERLTPRRKVAILSGVFVVVLAVNILKGGGAFPSPLGIRCGSFMFWGASVFILVWVTGTSLWVRDMLVAQWRLKTKCGYRYVEGDVQWSPSATIKYPSLCFFAGFCAGLFGVGGGIVKGPLMLEMGVHPKVASATSACMILFTSFTATTSFMVFGLL 447          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: D8LFQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ6_ECTSI)

HSP 1 Score: 393 bits (1009), Expect = 4.410e-132
Identity = 212/221 (95.93%), Postives = 217/221 (98.19%), Query Frame = 3
Query:  459 WDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQ-AKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPA 1118
            WDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKV+PEVVLTLSMVLLLVATADRTFRKG+KAFKKES+LQ AKELGGTAD KVSSAAAIS+DKSHTTLLGNGTKSYGA NGVEDGKGTFT AVLAPSS+PAAIAAGDVETPEEAMMIPTTAPVSPA
Sbjct:   12 WDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVLPEVVLTLSMVLLLVATADRTFRKGLKAFKKESSLQQAKELGGTADAKVSSAAAISNDKSHTTLLGNGTKSYGAANGVEDGKGTFTTAVLAPSSSPAAIAAGDVETPEEAMMIPTTAPVSPA 232          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A6V1T5B1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T5B1_HETAK)

HSP 1 Score: 369 bits (946), Expect = 3.120e-118
Identity = 207/405 (51.11%), Postives = 267/405 (65.93%), Query Frame = 3
Query:  432 HKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKADALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
            HK LLP +  D   V L+S GLMIAA GGIGGGGILVP++ILVL F PKYA+PLSNITIFGGAITNT LN+ KRHP+ADRPLVDWDLI++MEPLTI GA+ GSF+ KV+P+ +L + ++LLL AT+ +T  KG+  +KKE+    K L   A  K S  + ++ +                   +E+ + T                        E ++  T A  + AG ++    E    LQ L DEER T +  V ++T +F+V++  NLLKGGGAF SP+GI CG+ SFW  ++     +V VS   R+ L++R+  K E+G++Y EGD+EW    TI+YPC+CFFAGFFAGMFGVGGGIVKGPLMLEMGV P V+S+TSAVMIL+TSF+A TSFVVFGLL
Sbjct:   88 HKDLLPLDGTDFLGVFLSSIGLMIAAGGGIGGGGILVPLYILVLGFSPKYAIPLSNITIFGGAITNTILNIPKRHPVADRPLVDWDLIMIMEPLTIAGAIAGSFVNKVLPDWILAICLILLLGATSYKTITKGVSTYKKET----KALAAAASTKESELSVVAKE-------------------IEETEET------------------------EGLLEETRAEDAEAGGAEAVEPE----LQKLYDEERATPMHHVYLLTGMFLVIVAANLLKGGGAFPSPLGIECGTLSFWGMTLFILGVVVSVSLIARKQLIERYYKKKELGYKYVEGDIEWDEKATIKYPCLCFFAGFFAGMFGVGGGIVKGPLMLEMGVAPAVASATSAVMILYTSFSAATSFVVFGLL 441          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A7S2FP42_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP42_9STRA)

HSP 1 Score: 358 bits (918), Expect = 2.020e-114
Identity = 209/449 (46.55%), Postives = 277/449 (61.69%), Query Frame = 3
Query:  333 EGLLLVVANSDADAIDE-----------FGDEGIEFPSPEERGWHKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKADALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
            EG + +VA S + A DE           F +E  E     +  WHKKL P +  D   + L+  GL+IA+ GGIGGGGILVP++ILV+ F PKYA+PLSN+T+FGGA+ N F N+ KRHP ADRPLVDWDLILVMEPLTI GAL+GSF+ K++PE+VLT+ +V+LL  T   T  KGIK +KKE+    KE    A  K S  A + + ++                                        A  V+   ++ +          G  +  P   ++ LQ + DEE+   L KVG++ A+FVV+L +NLLKGGGAF SP+GI CGS  +WA++ + F+++  ++++ R YLVKR+  K E+G++Y EGD++W    TI YP  C  AG FAGMFG+GGGIVKGPLML MGVHP VSS+TSA MI++TSFTATTSF VFGLL
Sbjct:   40 EGPVPLVAGSGSLATDEESPSKDSSESTFSEEEKEEIPDSDMHWHKKLFPLDSTDYLGIFLSCCGLIIASGGGIGGGGILVPLYILVMGFTPKYAIPLSNVTVFGGAVVNYFTNITKRHPNADRPLVDWDLILVMEPLTILGALIGSFLNKLLPELVLTILLVMLLGCTTYETTTKGIKVYKKET----KENEAAAKVKESELAKVHNSEN----------------------------------------AEAVDAESQSFL----------GDEEKKPIISSE-LQKIYDEEKTVPLFKVGVLWAVFVVVLAINLLKGGGAFPSPLGIQCGSNGYWASTAIMFLWICIITWWCREYLVKRFHQKKELGYKYVEGDIKWDESATIWYPIACAVAGLFAGMFGIGGGIVKGPLMLRMGVHPRVSSATSACMIMYTSFTATTSFFVFGLL 433          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A7S4DAW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAW5_HETAK)

HSP 1 Score: 358 bits (918), Expect = 2.430e-114
Identity = 197/405 (48.64%), Postives = 260/405 (64.20%), Query Frame = 3
Query:  432 HKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKADALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
            HKKL P    D   + LA+ GL+IAA GGIGGGGILVP++++VLRF PK+A+PLSNITIFGGAITNT LN+ KRHP ADRPLVDWDLI++MEPLTI GA+ GSFI KV+P+  L + ++LLL AT+ +T  KGI+ +KKE                                   TK+  A  G+E  +G               +  G+++  EE +++                 E+ + LQ L DEER      V ++T +F+ ++  NLLKGGGAF SP+GI CG+ SFW  +    + ++ VS Y R+ L+ R++ K E+G++Y +GD++W  + TI+YPC+C FAGFFAGMFGVGGGIVKGPLMLEMGV P V+S+TSAVMIL+TSF+A TSFVVFGLL
Sbjct:   78 HKKLFPIGLLDFLGIFLAAIGLVIAAGGGIGGGGILVPLYVMVLRFSPKFAIPLSNITIFGGAITNTILNIPKRHPHADRPLVDWDLIMIMEPLTIAGAIAGSFINKVLPDWSLAVCLILLLSATSYKTITKGIRTYKKE-----------------------------------TKALAALAGIEGFEGLLQK-----------VQTGEIQA-EEGVIV-----------------ERNELLQRLYDEERTVPTQNVCLLTCMFLFIVITNLLKGGGAFHSPLGIECGTLSFWGMTFCILLVVITVSVYARKQLIARYLKKKELGYKYVDGDIQWNEIATIKYPCLCLFAGFFAGMFGVGGGIVKGPLMLEMGVAPAVASATSAVMILYTSFSAATSFVVFGLL 418          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A4D9D1X1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X1_9STRA)

HSP 1 Score: 352 bits (902), Expect = 8.140e-112
Identity = 198/408 (48.53%), Postives = 258/408 (63.24%), Query Frame = 3
Query:  432 HKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAA---ISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKADALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
            H    P  + D   + L + GLMIAA GGIGGGGILVPIFILV+ F PKYA+PLSN+TI GG+I N  +N+ KRHP ADRPLVDWDLIL+MEPLTIGGAL GSF+ K++PE +L + +VLLL  TA  T +KG++ ++ ES   A+     +      AAA     DD+  T LL                                  +  + E P++ +                    KAD LQ +LDEER T   KV ++   F+V+L +N+ KGGG+F SP+G+ CGSF+FW  + + F ++V +S YVR  L+K + LKA++G++Y +GD+EW    TI+YPC+CFFAGFFAGMFGVGGGIVKGPLMLEMGV P V++++SA MILFTSFTATTSF +F LL
Sbjct:   93 HHPFWPLQRNDEIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVLLLTYTAQSTLKKGLRVYQIESQAMAQASRPQSKQLKDLAAAEKNYEDDEEKTLLL----------------------------------SPDEYENPQDNIA-------------------KAD-LQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLL 446          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A7S3K149_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K149_9STRA)

HSP 1 Score: 349 bits (896), Expect = 2.940e-111
Identity = 195/431 (45.24%), Postives = 270/431 (62.65%), Query Frame = 3
Query:  381 EFGDEGIEFPSPEERGW-------HKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKADA-LQLLLDEERHTS-LAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
            E+G+ GI      E+ +       HK   P  + D+  ++ A  GLMIAA GGIGGGG+LVPI++LVL F PK+A+PLSN+T+ GGAITN  +N  KRHPLADRPLVDWDL+++MEPLT+ GAL G FI K+ PE+VLT+ +V+LL  T +RT +KGIK +KKE+ ++   L   A    + A+A  D ++   LLG                                    D  T E+          +P+   +   + K D  L+ ++DEE+ T+ L KV ++  +F++++ +NL KGGGAF SP+GIVCGSF FWA++   F+ L+G++FYVR YLV R   K  +G+ Y +GD  W   ++++YP ICFFAG  AG+FG+GGGIV GPLMLE+GV P V+S+T+A MIL TS TA T+F+VFGLL
Sbjct:   33 EYGESGIRELQEVEKRYVIDSITGHKTFYPVTRSDIVGILCAIIGLMIAAGGGIGGGGMLVPIYVLVLGFEPKFAIPLSNVTVLGGAITNVLMNAAKRHPLADRPLVDWDLLILMEPLTLAGALAGGFINKLAPEIVLTVMLVILLGLTTERTAKKGIKLYKKETEIKNAHLSKLA----AEASASQDAEAGEALLG-----------------------------------ADDNTEEDE---------NPSSEEEKRKTIKIDPELKNIIDEEKETAPLWKVQVLLGMFILIVAINLAKGGGAFPSPLGIVCGSFLFWASTAFMFIALIGIAFYVRNYLVARTADKDRLGYNYVDGDFHWDATSSLKYPAICFFAGMCAGLFGIGGGIVNGPLMLELGVLPPVASATTACMILLTSTTAATTFIVFGLL 415          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A7S4JJ89_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JJ89_9STRA)

HSP 1 Score: 351 bits (901), Expect = 3.630e-111
Identity = 199/409 (48.66%), Postives = 260/409 (63.57%), Query Frame = 3
Query:  432 HKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEK----ADALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
            HK L P    D      A+ GLM+AA GGIGGGGILVPI+ILV+ F PK+A+PLSNIT+FGGA+ NT+LN +KRHPLA+RPLVDWDLILVMEPLTI GAL+G+F+ KV+PE  L + +V LL  TA  T +K +K +  ES    +E+G   DG           +S  T + +      A++ + DG+                   G+  + EE             G  D+S  E      D L+ +++EER   +  + ++  +FVV+L +NL+KGGGAF SP+GI CGS SFW  + L   ++  +S + R YLV+R+ LK E  ++Y +GD++W    TI YP +C FAGFFAGMFGVGGGIVKGPLML MGVHP VSS++SA MILFTSFTATTSF+VFGLL
Sbjct:  120 HKPLRPLGGNDFVGFFCATIGLMVAAGGGIGGGGILVPIYILVMGFSPKHAIPLSNITVFGGALANTYLNTRKRHPLAERPLVDWDLILVMEPLTIAGALIGAFLNKVLPETFLVVMLVALLSFTAYNTLKKSLKMYAAESRHMREEMGIREDG---------TKESELTRIAHDEDEVEASDHLLDGE------------------RGEGGSDEE-------------GAEDVSLEEDDXXXXDELRQIMEEEREAPMMNIMVLVTMFVVVLFINLMKGGGAFPSPLGIKCGSTSFWVANFLMLGWIFIISVFARAYLVRRFELKKEHNYQYVDGDIQWDSRATIVYPIVCCFAGFFAGMFGVGGGIVKGPLMLAMGVHPAVSSASSACMILFTSFTATTSFIVFGLL 488          
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Match: A0A7S2HCU8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HCU8_9STRA)

HSP 1 Score: 348 bits (894), Expect = 3.190e-110
Identity = 200/405 (49.38%), Postives = 257/405 (63.46%), Query Frame = 3
Query:  432 HKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKESTLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKGTFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKADALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGSFSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLNTIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILFTSFTATTSFVVFGLL 1646
            H  LLP +  D A V+ A  GLM+AA GGIGGGGILVPI+ILV+ F PK+A+PLSN+T+FGGA+ N FLN KKRHPL DRPLVDWDLILVMEPLTI GAL+G+F+ K++P++ L + +V LL  TA  T +K IK ++ ES    + +   A+ ++     I+ ++                                P S        + +  E+  + PT                K + LQ +LDEER T  + V ++  +FVV+L +NL+KGGGAF SP+GI CGS SFW  + L   +++ +S Y R YLVKR+ +K  VG+EY EGD+EW    T+ YP +C  AGFFAGMFGVGGGIVKGPLML MGVHP VSS+TSA MILFTSFTATTSF+VFGLL
Sbjct:  107 HPPLLPLSASDYAGVVCAVLGLMVAAGGGIGGGGILVPIYILVMGFSPKHAIPLSNVTVFGGAVANVFLNSKKRHPLVDRPLVDWDLILVMEPLTIAGALIGAFLNKILPDIFLVVMLVALLSFTAYNTLKKAIKMYRIES----RHMREQAESEL---VKITHEEXXXXXX--------XXXXXXXXXXXXXXXXATPGSXXXXXXXXE-DMMEDVAIYPT----------------KNEELQQILDEERTTPKSNVQVLVVMFVVVLFINLMKGGGAFKSPLGIKCGSMSFWIANGLMIGWILYISMYARNYLVKRYEIKKRVGYEYVEGDIEWDGRATVVYPIVCAAAGFFAGMFGVGGGIVKGPLMLAMGVHPAVSSATSACMILFTSFTATTSFIVFGLL 479          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1926.6168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD73_9PHAE4.500e-25694.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGS5_9STRA2.780e-13354.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LFQ6_ECTSI4.410e-13295.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1T5B1_HETAK3.120e-11851.11Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2FP42_9STRA2.020e-11446.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4DAW5_HETAK2.430e-11448.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D1X1_9STRA8.140e-11248.53Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3K149_9STRA2.940e-11145.24Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4JJ89_9STRA3.630e-11148.66Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2HCU8_9STRA3.190e-11049.38Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1926contigEcto-sp13_S_contig1926:92..11461 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score395.2
Seed ortholog evalue4.7e-107
Seed eggNOG ortholog2880.D8LFQ6
Model size1649
Hectar predicted targeting categorysignal peptide
Exons10
EggNOG free text desc.Sulfite exporter TauE/SafE
EggNOG OGs28PZK@1,2QWNB@2759
Cds size1548
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1926.6168.1prot_Ecto-sp13_S_contig1926.6168.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1926 92..11360 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462980.1425762-CDS-Ecto-sp13_S_contig1926:91..1891681462980.1425762-CDS-Ecto-sp13_S_contig1926:91..189Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 92..189 -
1681462980.1543276-CDS-Ecto-sp13_S_contig1926:1017..12111681462980.1543276-CDS-Ecto-sp13_S_contig1926:1017..1211Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 1018..1211 -
1681462980.1645343-CDS-Ecto-sp13_S_contig1926:1526..16811681462980.1645343-CDS-Ecto-sp13_S_contig1926:1526..1681Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 1527..1681 -
1681462980.1768155-CDS-Ecto-sp13_S_contig1926:2769..28531681462980.1768155-CDS-Ecto-sp13_S_contig1926:2769..2853Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 2770..2853 -
1681462980.1868258-CDS-Ecto-sp13_S_contig1926:3752..39081681462980.1868258-CDS-Ecto-sp13_S_contig1926:3752..3908Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 3753..3908 -
1681462980.194947-CDS-Ecto-sp13_S_contig1926:4755..48541681462980.194947-CDS-Ecto-sp13_S_contig1926:4755..4854Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 4756..4854 -
1681462980.2035515-CDS-Ecto-sp13_S_contig1926:5519..56301681462980.2035515-CDS-Ecto-sp13_S_contig1926:5519..5630Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 5520..5630 -
1681462980.2149959-CDS-Ecto-sp13_S_contig1926:5845..58801681462980.2149959-CDS-Ecto-sp13_S_contig1926:5845..5880Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 5846..5880 -
1681462980.2305129-CDS-Ecto-sp13_S_contig1926:6664..69241681462980.2305129-CDS-Ecto-sp13_S_contig1926:6664..6924Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 6665..6924 -
1681462980.2405078-CDS-Ecto-sp13_S_contig1926:11004..113601681462980.2405078-CDS-Ecto-sp13_S_contig1926:11004..11360Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1926 11005..11360 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462980.2510674-UTR-Ecto-sp13_S_contig1926:11360..114611681462980.2510674-UTR-Ecto-sp13_S_contig1926:11360..11461Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1926 11361..11461 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1926.6168.1

>prot_Ecto-sp13_S_contig1926.6168.1 ID=prot_Ecto-sp13_S_contig1926.6168.1|Name=mRNA_Ecto-sp13_S_contig1926.6168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=516bp
MASFRTLLLLRKALLLGAIVLVCCVAVSVVGPQHSTTATTSSGPSFNPPA
EDRGHQQGLWPEGEGQRRSLVTGGVPGEGLLLVVANSDADAIDEFGDEGI
EFPSPEERGWHKKLLPPNKWDVATVILASFGLMIAAAGGIGGGGILVPIF
ILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILV
MEPLTIGGALVGSFIQKVIPEVVLTLSMVLLLVATADRTFRKGIKAFKKE
STLQAKELGGTADGKVSSAAAISDDKSHTTLLGNGTKSYGATNGVEDGKG
TFTPAVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVSPAGTSDLSPSEKA
DALQLLLDEERHTSLAKVGIMTAIFVVLLTVNLLKGGGAFDSPVGIVCGS
FSFWATSVLSFVYLVGVSFYVRRYLVKRWVLKAEVGFEYTEGDVEWTPLN
TIRYPCICFFAGFFAGMFGVGGGIVKGPLMLEMGVHPMVSSSTSAVMILF
TSFTATTSFVVFGLLT
back to top

mRNA from alignment at Ecto-sp13_S_contig1926:92..11461-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1926.6168.1 ID=mRNA_Ecto-sp13_S_contig1926.6168.1|Name=mRNA_Ecto-sp13_S_contig1926.6168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11370bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1926:92..11461- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTGGGTTCGATTGCAGTACTGACCAGGCGCCCGGGGGACGAGACTCTG TAGCGGAGCCAGCGGCACACACACGCACATCCTCTCTTTTCGAATCCCAC CATGGCGTCGTTCCGGACGCTGCTGCTGCTACGCAAGGCACTCCTTCTTG GCGCCATCGTGCTGGTCTGTTGCGTGGCCGTCTCTGTTGTTGGGCCGCAA CATTCCACAACAGCAACAACTTCTTCCGGACCATCGTTCAACCCTCCCGC CGAGGATCGGGGTCATCAGCAGGGGCTATGGCCCGAGGGCGAAGGCCAGC GGCGTTCTCTCGTGACCGGTGGAGTCCCCGGAGAAGGGCTTCTCCTGGTT GTGGCCAACAGCGACGCGGACGCCATCGATGAGTTCGGCGACGAGGGCAT CGAATTCCCCTCGCCCGAGGAACGTGGTTGGCACAAGAAACTACTTCCCC CGAACAAGTGAGAGAGGCAGAGACAGGAAATAAAAGCTGCAGCTGGGGTG TGCAGCAGTGATTGGGTTGGTGAAGTTGGCCTCACTCAAGTGTCTATCTC CCCGCGAAATATATCGCTGCTCTGAAGACGCTCGAGTCATTCAGATAATA GATCGCCATCGTGGATTGTAACGGCTGAGGGAATTGGAAACCTGTACCAT GTATTTACGTACTTCCCCCACACCACACCATGTGGCGATCATGATGGCTT TTCTTTACCGCACCGATCCCAGGTTTGGCAGCCGGAACAAAATCGATGTT CTTGTCAAAAACGGTTGGCTGGTGCACGTCACCTGATTACGTTAATTCAT CGTTAACTGACCCTCCATATCTGACACAGATTCTACACAGACTGCGAACA ACTGAGCTATCTGCTGTATGTACTTGCGCGACGGCATGATGAACGAACGG GGCTGGAAGCTGGAAGCGTGAGCATCCGCTCCACGCGATGTATTCGAGAG ATACACATTATGTCCCCCTCCGACAAACAACAAAAAAGCAAGTGTTTTCG ATCTGGAGACACCACCGCTCCCCTACACACAGTACAATTCATGGAGATTC ACCTACGTTGTACGCCTCCTTACGGCGTATGTTGTACGCCTCTTCACCGC GTACAAGCATGATGAGTGGATCATCAGTGGATCCATAAGTCATCGAACGA TGCACTGATCCCTTGACCATGGTACCACGACCGACACCGCAAGTGACATT GGGTACAAACATGCATTTCGTTCCATATTTCACCAAGTGCCACTCACCTA CATAGACTAGTCTTGCCCGCAAGGCAGGGAAAATCAACGCGCATGTGAGA AAATATTCCTCTGCGCTGTTCTTATGATTGTTCCTAGACTGCCGCTAAAT AGTGCGGGAAGGGGCACACACCATGTATCTACGACCACGGTAGGTAGTCG CGCCTGTCTAATGAGGACGAACCCAGAGGTGGTGATGCGTGTCAGAGAAA TAACAACAACCGACCAAGTAGTTTTATAAGATACACATGGCGACGAAAAG TACTACTGTATTCCTCGACGGCAAGACATCGCATGCCTGCCTAAAGGTAC ATGGGTAGCAATTGATGAACTCTTCTTCTAAATCCGCCGTTGTTTACCGT GACAGTCACGAGGGGCGAGGGGCTCTCTCTTTCTGTTCTCTCTCTCTTCC GATGATGCATGTGATCACGTATGCACACGTTTACTGTAGATCCAGACAGC TCTGAGTAGGAGATACCTTGATTGCGTTGGACTGTAGTTACAACGAAAGC TCAGTGTTTGATCTGACGCGGACGACACATCCTCTCGAATGCAACATCGA GCAAAGTAGCCTTTTGCTTGCTCTATCGGCCACGGTGACTGAAGAAAAAA CTAAGTTACTCAACAAAAGAACTGCGCGTCCCAAGGCGTCACTTTTGTGT GTGTGTTTATTTTCCTTCCAAGATGCCGTGCCATGCACAGCAAGCAAAGT ATTCGCGCTCTGCGGCAAAACGTCGTTTTTATTCATTGCAAAGCTGATTT TTTGCACTGCTGTGAGAGTGGGTGTGGGTGTGTTTTCGTCCTGTTTATTA TGGCGACAGTCCCCCTCATTTTTCGGGGTGAGACGTGTACTACGTTTTTC AGCGTATATAGAGTGCTACAGTTTTCAGTTTATTTTTTCGTATGCTCATC CATACAACTGCAACCACCTATACAGAGCCACACAGGAGAGGGTAAACACC AGGGCTTCGTTTTTTTTTTTTTTTTCGTGCCCCACCTTCGTCCTGCGGTG CGCGCTGAATTTAATTGATATCGCGAGAAGGGTCCAGCCGTCCCTTTCCC TCGTCAAAGGTGTGCTAGCGTCGAAATTTGGTACTCACGAGAGCTTTTCA GCTATATTTCGTTTTTCAGTTGTATTTCGCTGTCACCAACAAACCCGTGG ATTTTTCACCCCTTGGGGATTCGAACTGACAACCTTTGCGACTGGCGGTT TACGATGATACCACTGGATAGACCACCGAGAGTACTCGGGAAAAAGACAC TAACAACGGAACAGATCCGAGGGTGTGACACCACAGCATCATTGGGCCCT CTGACAACGCCCCGGTTGAGCGTTGCATAGCGGCGGCCAAAATTTCTGGG CACAGACTGAATCATCAAGCAAGTCATTCTGTACTTTTGAATAGCGCCTG TCACATACCGGCGTTGTTGAGGGCACACTGCTGTACAGCAGTCTCTGTGT TCGCATCAGGAGCTCCCGGTACTCTTGAAATATGTTATTCTTGACCCGCG AGGTAGGTAACGGGTCCCGAAAATGCAAATACAGGGCTTGGTCCGGGAGG AACACGTACAGTACAGGAGTAATAGCGGCACTCGCACCTCAAGAACGCGA TGCTTTGGTTAAAGCTCCACATATGTATAGATACAAGTATGCCATTTCTA GTGCGAACAGGAAAAGAACCAGACTACCTCTGCACCAGCCACCAAACAGA GCCTACCCAACGTGTGTGATCGCTTCCTTTTTTGTTGTTTTCTCTGCTGG CCCCCACATAGCCTTTCTCTCACCACCGCCAACCATACCGAAGATACAGC AGCACTAGCGAAGCACTACATATTAGCCTACCGTAGGTGTCCCAAGATAT CACACATCACACACCCTGAACCGATTGTCAAAGCTTGAAAAACCCATGGC AGAAAGAAATGGTGGTTGACGAATGGCGGCGTTGGAACAGTCTCGTCGAG AGCTTCCCAGAACCAAACGTGCCATCTGATTTTGGCGTCCTCTTCGACGT GGAGTTGTCGAGCTTTGAAAATCGGTCCAGGAGGTGTCATGTCTTGCGTC ATGATACATAGACTATGTATCAAGGTAAGAGAGCGGTGTTGTTCCTCTGC CGCTCGCCTCGAGTTGGGGTGAAAGTGCTTTCGCGCCCCATCAGAAGAGA GCGGGCGTGAAAAATACACAGTGGGTGCGGACCCAGAGCTAAGAAAAATG CCGCTACAGCAGCAGCAAAGTACAGATTCAATACGAACGGAACAAAAAAA AATTGGGGACAAGAAACACAGCCAGCCCCACCCCGCCGAGGAAACTACAC AAAAAGCTTTCAATTATCGTGCGCTCGACGATACGTAAATAGTGAAGAAA CAAAGGAAAATTTGAGCATTGACCCGAAATTGCAGTTTCTGGTATCGAGG CCGGTACTGTAGAGGATGAAGATGGGGTGACTGGTGTGGGTAGGTTAGGT TTAGGTTCGGTTAGGGATAGGGTTAGATCCGCGGTGGGGATACGAGACCT AGATGGAAGGGTAAGGGTCGAAACACGAAAAAATACGTTTCGGTCCCGCG GAGGGGGGGAGGGGGGTGTTCCGACGAAGTGTCCCAAACCGAGAGTCGCT TTGTGCGTCGTCATCCCCAAGCCAAATTGTCGGTTCTTGTGGTTTTGGTG AAAATTACATCCTCCCTCCCCCCCCGTAGGGATGAGAGGTCAATGGTCTA ACGAACATGGCATGCACGACCATGAGCACACACCCCGACCCTCCCGCGCC CCCCCCCCGCCCACCCACCCCCGCCCACCCACCTAGATCGTCAGGAAAGC CACCTACTGCTGTAGCGAACAACGAAACCTAGACAGGCCCTTGGCCGCCC TATTTCATGAACGGACGTGAACCGTAACGCCGTGCCTACATCGACGCAGA GCAAGAGAAATCCTCATGATTGACGCCCCCCCTTCCCGGCAGGCTACCAG CGGAGGACCACCTACAAAAAAAAGTCAACAAGACGGAACGGAGCAAACAC ATCGCAAAATTGTATGAGTGGCCGCACATCCCCGCTACCTACGTCGTAGT TCGAGCCGAGGGGCGATCTGCAGAGACCTCGTCGAAGAGCTTTTCCTTTT TAGACCGCTTTTATCTGCCGCTTTTCTCATCGTCATGTTCCTATAGCAAT CGAGCTTCGGTCTTCAGGGGGTGCGATCACTCACACTGTTGACGCTTATC CTCCCACCCCTCGCCAGCATCCCACGTCTTCGTAACCACTCACCTCGTCC CCACTGCCACTCGTCAAACTGCCCGAATCGAAACCAGATGGGACGTGGCG ACGGTGATCCTGGCGTCCTTCGGGCTCATGATTGCAGCGGCCGGCGGGAT CGGCGGCGGGGGCATCCTCGTCCCCATCTTCATCCTTGTGCTGCGCTTCG GCCCCAAGTACGCCGTCCCGCTGTCCAACATCACCATATTCGGAGGCGCC ATCACCAACACCTTCCTCAACATGAAGAAGAGGCACCCCCTCGCGGACCG GCCATTGGTCGACTGGGACCTGATCCTCGTCATGGAGCCCCTCACGAGTG GGTTTTGCCTTGATGCCGTGTTTTGATTGTGGCGACGTTGGACTGGTTTG TTACCGGATGTGTGTGTGTGTGTGTGAGGGTTTGTCTCTACGGTTCACCG AGCGTCGTTGAGAAATTACCTGACTCACGGGTCCCTCTTGACCGATTGAG TGTGGTGAGAGGCAGACGTCAGCAGGGTAGCTGCGGGCGACGTGCTTGAC GGCTGTACGATCGCGGCTGGTGATGGGATGTCCGAGTCCTTATGCCCTCT CTTTCGCGTGTGGAAAGTATTTAGTAGGAGCAGTGATGAAGTGTATGTAC GGGCTTTGCTTTTCTGTTGGGCGTGCCGTATGCACACATGCGGTGTCAAA CGTCCAAACGCCGCCGCCCCTCCCTCTAGATCCTTGGAAAAATCAAAGGA AGTGTAATTTTGCGTCTCGATCTTTAGTGTCGCCCGGCATCCTCCTTCTC ACAAAGGCGATTCGCAGCCGTTCCTCTCCTTTTCATGGTTAATGAGCTCT CGCTTTTATAGTTGCTTCTACGACATGCCATCAGCTACTGGGGAGAAACC ATAGCACGGCTCTGCACGTCGGAGTTAGTCCACCTACCGTCCAAACTGCT TCGCGTTCTTGCTTTCCTGCAGACCCCTGTTCAGATATCCCCCCGCACCC AACATGCTCTTTGTGCCTGACAACCCAACGCCCCCCCTCTCAACATGCTA TGTTTCCCTGAAAAACCCTCAACCCTCCCCTCTCCTCCTCCCTTTTCCGT CCTTGGATGAACTCACGCTATTGTACGGCAGTTGGGGGTGCGCTAGTGGG ATCCTTCATCCAGAAGGTAAGATGATGTATACATGCGAGTGCCGCGCGTC AGGGACCTACCTACCCCAGCAGCAACGCCATAAGGGTTTTTGTTTTCGTA TGTCGGGGATGCGCTCAATCTTTGGCCAATGAATCATTGCACCTCCCCGC TCCCTGCATACTTGGGGCTATCTTACGCAACAAATGAATGTCACCGCTGC CCTTGTGGGTGCACCGACGCCGAAAATTTAGGTAATCCCAGAGGTTGTCC TGACGCTGAGCATGGTCCTGTTGCTGGTGGCCACCGCGGACCGCACGTTC CGCAAGGGCATTAAGGCCTTCAAGAAGGAATCCACCCTCCAGGTGCGCGG TTGGTCTTCTTTCTCCGGTGGTCGTTTGTGCTCTTGGTATCCCGTGTCGG CTCAGAAGCAGCGATGAAGAAAACGCATGCGTGTGTTGTTCTTGGTGCAC CATTGGGCGTTTTTTCTCTCTGGGAAGACACAGTCATTTGGTAGAAACAA ATCAGAGGAGATATATCGTTGTCGCTTGGTCAGCAAGGTCACCCGAGATC TCCGAGAGAGGACCGAACTTCAAGGTGCTCAGGTAGAACACGAGTGGAAG AACAAGTGGTTTGTGCTCGTCTGCACGTCCACAGCTCACGACTGCTCACA CAAAGCATCCGAGAAAGGGCTCAACACGACTCCCATCCTCAGGAGCGCAA TTCATTCCTATAGGGCAGTAGAACAACCGTCATCTTCAGCAGCGGTAGCA ACTGTAGCACCACCGGAGGACAGACTGCATTTTTCTTTTAGAATGCTGCA TGGAGGACCACAAGCGTAAGGGGTAGTCAACGGCTTCCCCACGGAGCACC TCTTGGAAGCAGAAGAAGATGGCCGTTCAATGTACCCCGGTCCGCTAATC TCGTGTGTTGTGCATCGTAAGCATGTGTCCGGTGTATGCCAAAAATAACA TCGAACGACCGCACAACTGCGACAATAATTCGTTGCCGTGTGACGTCCGC GCAGCAGGCGAAGGAATTGGGTGGCACGGCAGATGGGAAGGTGTCGTCGG CCGCGGCCATCAGCGACGACAAGTCACACACCACCCTCCTCGGTAACGGA ACGAAGGTGCGCGGGCATCACCCCAGTAGCGGTGGACTCAAGAACTGCGA ACTAAAGCAGTGCGTGACATGGTGTATCCCCTCTCCCGCCCTCCTCGCGC ATGGTGGCATGCAGCTCACGGCCTCATGATGTGCCCCTGGTAGAATGCAG CTCACGGCCTCGTGGGATTCGGCCCACACCCCACGGCGTTTGGCGCTCGA TGCCATGCGAGCCTGGCCGACCAATGGCCCGCGGATCCCATCCCAGCTTT GTAAAGGGGTGCGAGGTTGTCTACTGTAGTCTAGGGACTACGGCATGGCA CTACCCGTCGCCGTTGATGTGGAGCAATCGCCCCTCTATAATACTCTGTT GCGTTGCTTTACCGAACGCGACGCATGTCTTCCCGGTCCACGTACACGGC AGCGCGTCATGGCTTGTTGGACACGTGTCGTGCTAACCCACAGCCGTGCG CGCATCACACCTCTACGGGCATTGGCAGCAATACACCTCAGTTTTTCTTT ACTCAATTTTATTGTTACATCGACCGGTGGTCTTCCTTAAGGGGATTTGC ATTCAGTGCAAAGTTACTCGCTAACCTCCCTCCCGCACACAACCACGCAC ATATCCCTCCCCTTGCCAAGCCCTCTCCGTCCCCCTGCATCTCCCACGCA CCGCCCGCTCGTTCACCCAGCAGTTTCTCATAGGCACATGTACCATGCCT CCTCCTCAGGTCTTCTTTCGCAGCTCCCGTGCGCTTGACTCTCGAATCAT CCCCATCTCTATTCAGACGTTGCTGCACGCTGGTTGGTCGAGAAATGTTT GCCGAAAACCAAAGATATTCTCAGTTGTGCTCCTTCCTGCCGTGCGCCTG CAGTCCTACGGCGCGACCAACGGTGTCGAAGACGGAAAGGGGACCTTCAC CCCGGCGGTGCTGGCGCCGTCCTCGACCCCTGCCGCCATCGCCGCCGGCG ATGTGGAAACCCCAGAGGAAGCGATGATGATCCCGACAACCGCCCCGGTG TCTCCGGCGGTAAGGGTGGCAGTGATCGACTGTACCATCTGGTTCTACTG CATATTTTCAAACGAAGATGTTCGCCTAGTGTCTCCGACGGTATGGATAG CAGTGATAGGTTATACCATCTGGCACTTCTGCATATTTCGAAATACTGTG CAAAAGATGAACTTGTCGTGTTATTAGAAAGAGAAAAAACAAAAAACGTG ATCAACGTTCGTTCGAAAGGTAGGTTCAAAACACCGAAAAAGATGTGTGG GGGAGGCGCTATACTGCTACTCTGCTGTGTGGTGCGCCCGATGCGCGTGT TGTTTTCTGTTGATGTCCTGCATACACTACTCAACGGTCATGCGGACGGT TCAGCTGTTCGGTGCGCATGGAGCACAATGACGTCGCCGAATCGATGACA GAAACCGTCGCGGCTTGTCGAGACGAAAAGAAACGCCCATCTTCTGCTCG TACAATTCCCTTACCTTTTAATAGCCCGCTCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCTCCCGTCTCTCGTTCCTCGTGGGCTTTTGGTTGGGG TTGGGGGGGGGTGTGTCAGGTGTTTGTTCAATGAGCTCTANNNNNNNNNN GGTTGTCGAAAAAAAAAAAAACCCCCCTCTTTTTCCCTTCCAATTCCCTT TCCTTTTTATAACCCCCCCCCCCCCCCCCCCCCCCCCCCCACATGCTCTT GTGTAGCGTTCTGCGGAACCCGGGCACGGTTTGTGTAGGGATGCGAGGGT CCATGGCAATTTCATCACTCGTCGGAGACATGCAGCAGGAAATCATAGCA TGGGCAATTGTTCGACAACGTGCACACACACCCCTCCCCCTCCCCCTCCA CGCCTTTCTTCGTCGCGACTCACGAAATTCGCTACACTTGCCTTTTCTAA CCCCCTAGGGAACTTCTGATTTGTCACCCAGCGAGAAAGCGGACGCCTTG CAACTGCTACTGGACGAAGAACGGCACACATCTTTGGCAAAGGTGATTGG TCTGCTTTTCCCGCGGGTGGCCTGGCGGGGCGGGAAGGGGGGAGGGGGCG GGGATTGTGGTCGGCCCTCGTCCGAAGATATCAAGGTAGCATGTACTCGG AGTAAGATGTGGTGGACTAACCAGTGATTCTCCTGTGCTAATACTTGACG CTACACCGATGCTCCCATTGGTCAACGCTGCACCAATTCCTACCTGTTTT GGATAATCGCGAACAACATTACGACGAATTTCGCAGACAGACCCAACAAC TGCGATGGAGCACTGTTTCCACGAAACCCGCTCCCTCTAGTGTCTCGGTG GCGAATGTTGATGTTCGCGATATTTGACCCCGGTATGGCATCAACATCTG TGGAGCCGCCCTCTCTTCCTCAGCAGATGGCCCGAACACCATCGCATCTG ACGACGACGATTTCGCGGTGCCCCTTCTGGTGTAAATCGACCTTTTGAGC GCCGGCGGACGCTGCCCTTTGTTCGTCCCGATTTCAGCTTCCCAAAACAA CTCGTAGCAACAAGGAAATGTCTTCACAGTTGGTACTTGCACTGAAAATT TCCGGTCGCGTGCCTCGTGAACACCGAAATTCATCGGTGCTGGGGTGGCA GTCCGACCGATATCGTTTTTGAAGACGACCACGACGAGGACAAAATCACC CACAACAATAATAATAACACTAACAGCTGCAAAAACCACGGTAGTTTTCT TTCCCCGTCAGGTTCGGTCGTTCACGTGACAAATCTGTCCTCCGTTCCTT CCCCCCCCGCCGATTCACACGGCGGGTATCATGACCTAAGCTTTTGTCTT GCGGTCACCACAAACGTATTTGGAGCATCTTTTTCCATCCTTCCACGTTT CGTTTTCGAATGTTTCGGCTGTTCAAGCTACGTCGGTCCCTCTACCCGTA TCCGTCCACTACACGTCAGACCTTCGACCAGACACAGCTGGCTATCCAAA AGGAAAGAACACCACAACGACGCCACACGCTTCCCTACGGCTGGTTGTCC AAAATGGTTGTCCAAAAAGAAAGAACACTATTTTACAACAAGGCCATTTT ATTTTATTTGCCTCCTCGATCTTGGAACAGGTGGGCATCATGACCGCCAT CTTCGTGGTGCTGCTAACCGTCAACCTGCTCAAGGGCGGCGGTGCCTTCG ACAGCCCCGTGGGCATCGTGTGCGGATCGTTTTCCTTCTGGGCAACGTCT GTCCTGTCCTTCGTCTACCTCGTGGGGGTCTCTTTGTGAGGATGGATTGT TTTTCGCGCATGAGGTGTTGCAGGACCCGGTTGGGCTACATTTCACACGA GCCTCCGTTATGTTTTATTTAGTATAACATGTGAGGACAGTTTGGCGCTT GAGGTGTTGCAGGACCCGATTGGGCTACAATTCACACGAGCCTCCGTTTA TATATTTTTGTCTCAGTATGAATCCATCCCTGTCCACAGATAAGGGTCTA GGATAGATTGGTAACGACCTCACCGCTATAGGAAACCGACTGTTCACCGC CCGCCCCTCCCCCCGTCCACCGCTCGCCGTTCCCCCCGTCGAAACCCCAG TTATGTGCGGAGGTATCTCGTCAAAAGGTGGGTCTTGAAGGCGGAGGTGG GGTTCGAGTATACGGAGGGAGACGTGGAGTGGACGCCGCTGAACACGATC AGGTACCCTTGCATCTGCTTCTTCGCCGGCTTCTTCGCGGGCATGTTTGG CGTCGGCGGGGGGATCGTCAAGGGGCCGCTCATGCTGGAGATGGGTGAGC CCCAAGAGTGATAAAAAGACGTACCATGAAAGGGTACAAGAGCATGCTGG TGCACAAGACGCTAGTGGTGCCTCGTTTTGTCCATACCGGGAGAACCAAG GGCCCAATAACAAAACGGTATACCAGATGTTTCCCTTTGGTAAACGGTAT ATGCCAGATGTTTCCTTTTGTTCAGCTCCAGGGAGTTTTTGGGTTTGACA GCAGTCAGGCAAGGACAAATCTCTAACAGTTAGGGACGCAACGCACACGG CAGCAACGCTCTTTACCTGGCTGGGGTTGCGAAAGGAACTAACACTCACC AGAACAAAACTACGTGAGAGAAAACATGTCGAGATCACGTACGAGAGTCT AGCAACGGACGGCTCCAAGAACACAACAAGGGTGGTAATGATCTTTCTAG TGCCCAATGCGCGAAGGAGGTACAGGTTTGAGGCCCCGCCCTTGCCACAT CCCAGGAGCACAGGAGTTGGCGGAGCCCCTCTCTGAAAGGACAATACAAG TGGCATGTTTTCTCCTCCACTGCAGTGTTGACCAAATCAATGCGACACCG TCGATTCCGCGCATGCAATCATTGTTTCACCCGATTGAAAGCGTCGAGAC GTTGGAACGCCGACAGACCCGTTTGCTCCTTACGCGGACGATGACTCTCG CTCGTTTTTCCCCGTGTGTGTGCGTGTCTCTCTATTTGCGTGTTTGTTCG TTTTCCCCTTGCCTCTTCTCTGTCTGCCGGCCTGCCGGTCTGTATCTGCT TCTCTCTCCCGGTCGCCCCCCTCTCCCACACCTGCGCGCATACGTGTGAT ACGCAAACTCGTGTATTTCTAGGAGTGCACCCAATGGTCTCATCATCCAC CTCCGCGGTTATGATCCTCTTCACCAGCTTCACCGCGACCACTAGCTTCG TCGTGTTCGGCTTGCTAACG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1926:92..11461-

>mRNA_Ecto-sp13_S_contig1926.6168.1 ID=mRNA_Ecto-sp13_S_contig1926.6168.1|Name=mRNA_Ecto-sp13_S_contig1926.6168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1548bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1926:92..11461- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGTCGTTCCGGACGCTGCTGCTGCTACGCAAGGCACTCCTTCTTGG
CGCCATCGTGCTGGTCTGTTGCGTGGCCGTCTCTGTTGTTGGGCCGCAAC
ATTCCACAACAGCAACAACTTCTTCCGGACCATCGTTCAACCCTCCCGCC
GAGGATCGGGGTCATCAGCAGGGGCTATGGCCCGAGGGCGAAGGCCAGCG
GCGTTCTCTCGTGACCGGTGGAGTCCCCGGAGAAGGGCTTCTCCTGGTTG
TGGCCAACAGCGACGCGGACGCCATCGATGAGTTCGGCGACGAGGGCATC
GAATTCCCCTCGCCCGAGGAACGTGGTTGGCACAAGAAACTACTTCCCCC
GAACAAATGGGACGTGGCGACGGTGATCCTGGCGTCCTTCGGGCTCATGA
TTGCAGCGGCCGGCGGGATCGGCGGCGGGGGCATCCTCGTCCCCATCTTC
ATCCTTGTGCTGCGCTTCGGCCCCAAGTACGCCGTCCCGCTGTCCAACAT
CACCATATTCGGAGGCGCCATCACCAACACCTTCCTCAACATGAAGAAGA
GGCACCCCCTCGCGGACCGGCCATTGGTCGACTGGGACCTGATCCTCGTC
ATGGAGCCCCTCACGATTGGGGGTGCGCTAGTGGGATCCTTCATCCAGAA
GGTAATCCCAGAGGTTGTCCTGACGCTGAGCATGGTCCTGTTGCTGGTGG
CCACCGCGGACCGCACGTTCCGCAAGGGCATTAAGGCCTTCAAGAAGGAA
TCCACCCTCCAGGCGAAGGAATTGGGTGGCACGGCAGATGGGAAGGTGTC
GTCGGCCGCGGCCATCAGCGACGACAAGTCACACACCACCCTCCTCGGTA
ACGGAACGAAGTCCTACGGCGCGACCAACGGTGTCGAAGACGGAAAGGGG
ACCTTCACCCCGGCGGTGCTGGCGCCGTCCTCGACCCCTGCCGCCATCGC
CGCCGGCGATGTGGAAACCCCAGAGGAAGCGATGATGATCCCGACAACCG
CCCCGGTGTCTCCGGCGGGAACTTCTGATTTGTCACCCAGCGAGAAAGCG
GACGCCTTGCAACTGCTACTGGACGAAGAACGGCACACATCTTTGGCAAA
GGTGGGCATCATGACCGCCATCTTCGTGGTGCTGCTAACCGTCAACCTGC
TCAAGGGCGGCGGTGCCTTCGACAGCCCCGTGGGCATCGTGTGCGGATCG
TTTTCCTTCTGGGCAACGTCTGTCCTGTCCTTCGTCTACCTCGTGGGGGT
CTCTTTTTATGTGCGGAGGTATCTCGTCAAAAGGTGGGTCTTGAAGGCGG
AGGTGGGGTTCGAGTATACGGAGGGAGACGTGGAGTGGACGCCGCTGAAC
ACGATCAGGTACCCTTGCATCTGCTTCTTCGCCGGCTTCTTCGCGGGCAT
GTTTGGCGTCGGCGGGGGGATCGTCAAGGGGCCGCTCATGCTGGAGATGG
GAGTGCACCCAATGGTCTCATCATCCACCTCCGCGGTTATGATCCTCTTC
ACCAGCTTCACCGCGACCACTAGCTTCGTCGTGTTCGGCTTGCTAACG
back to top