mRNA_Ecto-sp13_S_contig19208.6141.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: A0A6H5K4G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G0_9PHAE) HSP 1 Score: 214 bits (544), Expect = 9.660e-62 Identity = 114/139 (82.01%), Postives = 117/139 (84.17%), Query Frame = 1
Query: 4 RWDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARP--KKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKAFSRRASA 414
RWDTWTPT KRS EFE++NPQFCKEMVDDMKTRSEARP KKDSEAT ARLKGNRFYKAKRWE+ALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDG CVKAFSRRASA
Sbjct: 72 RWDTWTPTXXXXXXXXXXXXXXXXXKRSKEFEDNNPQFCKEMVDDMKTRSEARPVEKKDSEATTARLKGNRFYKAKRWEKALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGKCVKAFSRRASA 210
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: D8LU54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU54_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.430e-59 Identity = 104/112 (92.86%), Postives = 106/112 (94.64%), Query Frame = 1
Query: 79 KRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKAFSRRASA 414
KRS EFEE+NPQFCKEMVDDMKTRSEA KKDSEAT ARLKGNRFYKAKRWE+ALELYMTSLKARPYAVNTLANVAQTLIKLERWLD VEFCDRALHVDG CVKAFSRRASA
Sbjct: 210 KRSKEFEENNPQFCKEMVDDMKTRSEASEKKDSEATTARLKGNRFYKAKRWEKALELYMTSLKARPYAVNTLANVAQTLIKLERWLDVVEFCDRALHVDGTCVKAFSRRASA 321
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: A0A835Z620_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z620_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.570e-32 Identity = 65/130 (50.00%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 4 RWDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKA 393
RW+TWTP DPAT E ++E EED KR+ FE SNP FC+E +D + R AR K+ + A + RLKGNR++ A+++++AL LYM SL+ PY L+N A I+L++W DA+EFC+R LHV+ VKA
Sbjct: 203 RWETWTPDDPATQEEVAQKEAEEDAKRNAAFEASNPDFCREFSEDAQARQRAREKRANTANSLRLKGNRYFNARQYQKALGLYMDSLRDEPYCAAVLSNAAMAHIRLKQWGDALEFCNRTLHVEPANVKA 332
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: A0A8J2S7A7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7A7_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.670e-31 Identity = 70/143 (48.95%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 1 GRWDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVD--GNC---VKAFSRRASA 414
GRW TWTP+DPA+L E +E E ++ K + EFE++N FC + D K R ++ KKD A RLKGNR++KAK+++EAL+LY SL RPY TL NVAQ +K W DA+EFC RA+ + G KA SRRA+A
Sbjct: 218 GRWSTWTPSDPASLEEQQELERKKTEKENAEFEKNNKDFCDNFIADQKKREKSNAKKDETAGGKRLKGNRYFKAKKFDEALKLYRESLSVRPYEKATLLNVAQVYLKKRAWDDALEFCHRAVRIGRRGGADFHAKALSRRATA 360
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: A0A7S2WW51_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW51_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.720e-30 Identity = 68/137 (49.64%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 4 RWDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKAFSRRASA 414
RW+ DPA+ AE +E E E+D K + EFE+ NP FC + +D R +A+ K A RLKGNRF+KAK+++EALE YM SLK +PY + TLANVAQ + L +W DA+EF DR L++D VKA RR++A
Sbjct: 161 RWELDITDDPASQAEQQEAEAEKDAKEAAEFEKMNPDFCSQFKEDQARRQKAQAKAAENANVLRLKGNRFFKAKKYKEALERYMQSLKEKPYVIPTLANVAQVHLNLGQWDDALEFADRTLYLDPVNVKARVRRSTA 297
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: A0A8J5JDL3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JDL3_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.220e-28 Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 1
Query: 7 WDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKAFSRRASA 414
W+ W P DP +L E ERE E D+ R+ EFE +NP+FC + DM+ R + KGNRFYK K++EEA++ YM +L A P+ V LAN AQ ++L++ D VEFC R L VD N VKA SRRA+A
Sbjct: 139 WNQWVPEDPVSLQEKAEREAELDKLRNREFENTNPEFCNQFKKDMEERQRXXXXXXXXXXXLKQKGNRFYKKKQYEEAIQSYMEALTASPFNVAVLANTAQCYLRLDQLDDCVEFCTRTLFVDENYVKALSRRATA 274
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: F0Y6W2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6W2_AURAN) HSP 1 Score: 117 bits (293), Expect = 7.560e-28 Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 1 GRWDT--WTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGN-----CVKAFSRRASA 414
GRW+ WTP DPATL E E+E+ K + FE++N +FC + DM+ R +++ KKD ATA RLKGNR++KAK++++AL LY SL RPY TL NVAQ +K+ W DA+EF RA+ V KA +RRA+A
Sbjct: 1321 GRWNEGRWTPKDPATLEEEAAVEKEKTDKENAVFEKNNKEFCDNFMADMEVREKSKQKKDDTATATRLKGNRYFKAKKYDDALRLYRESLGVRPYEKTTLLNVAQVFLKMALWDDALEFAKRAVVVSRREGPDFHAKALARRAAA 1465
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: A0A329S2Y5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S2Y5_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.470e-27 Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 7 WDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKAFSRRAS 411
W+ W P DP +L E ERE E D+ R+ EFE +NP+FC + DM+ R + KGNRFYK K++EEA++ YM +L A P+ V LAN AQ ++L++ D VEFC R L VD N VKA SRRA+
Sbjct: 139 WNQWVPEDPVSLQEKAEREAELDKLRNREFENTNPEFCNQFKKDMEERQRXXXXXXXXXXXLKQKGNRFYKKKQYEEAIQSYMEALTASPFNVAVLANTAQCYLRLDQLDDCVEFCTRTLFVDENYVKALSRRAT 273
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: D0NKV1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NKV1_PHYIT) HSP 1 Score: 112 bits (279), Expect = 5.490e-26 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 1
Query: 7 WDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKAFSRRASA 414
W+ W P D +L E ER E ++ R+ EFE+ NP+FC + DM+ R ++ +K A R KGN FYK K++ +A++ YM +LKA P+ V LAN+AQ ++L++ D VE C R L+VD VKA SRRA+A
Sbjct: 139 WNQWVPEDSVSLQEKAERNAELEKLRNREFEDINPEFCNQFKKDMEERQRSQEEKARTAERLRQKGNHFYKKKQYPDAIKTYMEALKASPFNVAVLANIAQCYLRLDQLDDCVEVCTRTLYVDEGYVKALSRRATA 274
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Match: A0A7S2B152_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B152_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.100e-24 Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 103 SNPQFCKEMVDDMKTRSEARPKKDSEATAARLKGNRFYKAKRWEEALELYMTSLKARPYAVNTLANVAQTLIKLERWLDAVEFCDRALHVDGNCVKAFSRRASA 414
+NP FC E D + R++++ K+ A A RLKGNR++KAKR++EAL LYM SLK RPY TL N Q +K W DA+EF DRA++++ + VKA +RR A
Sbjct: 2 NNPDFCTEFKADAEKRAKSQEKQTETAVALRLKGNRYFKAKRYQEALGLYMDSLKERPYCYVTLTNCCQAHLKRTEWADALEFADRAIYLEPSTVKARTRRVVA 105 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19208.6141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19208.6141.1 >prot_Ecto-sp13_S_contig19208.6141.1 ID=prot_Ecto-sp13_S_contig19208.6141.1|Name=mRNA_Ecto-sp13_S_contig19208.6141.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp GRWDTWTPTDPATLAEAEEREEEEDRKRSTEFEESNPQFCKEMVDDMKTRback to top mRNA from alignment at Ecto-sp13_S_contig19208:680..1730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19208.6141.1 ID=mRNA_Ecto-sp13_S_contig19208.6141.1|Name=mRNA_Ecto-sp13_S_contig19208.6141.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1051bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19208:680..1730- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19208:680..1730- >mRNA_Ecto-sp13_S_contig19208.6141.1 ID=mRNA_Ecto-sp13_S_contig19208.6141.1|Name=mRNA_Ecto-sp13_S_contig19208.6141.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19208:680..1730- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |