mRNA_Ecto-sp13_S_contig192.6134.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig192.6134.1
Unique NamemRNA_Ecto-sp13_S_contig192.6134.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: A0A6H5L882_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L882_9PHAE)

HSP 1 Score: 921 bits (2380), Expect = 0.000e+0
Identity = 612/772 (79.27%), Postives = 624/772 (80.83%), Query Frame = 1 
Query:    1 MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALTNFLPALRKRLFLAVDVTGPVRELKALRTGMAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRRTNDDDITPGSSTETAASLPDGNPGMMPSPSXXXXXXXXXXXXXXXXXXAVRQGAGASDWSGGAATAGLALSMEARHSLLSSTYEHVLGDGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGXXXXXXXXXAAVGEGLGRSSGVRHALLLRYIINPSDGIGGMAAAATTTAPAPTNDTTLEGVIANGTGTGTDTASAGGTAGVRNGGASSLGXXXXXXXXAGGVLLQGAGEVLDETWDTAESPNFAAALQARQPAARKLLYFTI------------------------CLDATFGMVYEQLRQKAFCRGSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSELTAXXXXXXXXXXXXXXXXXXDGGGLPAGXXXXXXXXXXXTVGFVAAAPAVAEREESAQVLATVISQAKLVVSEILEASPGNEYAHAVASLPSVQDLCFSVFSGGAAAAAAGGTQLHINPVAAA-----GPRGISSPHPNAAARSGGGVGDVGFPPQEPLPVGSAGGFGGGGIGVGGGDSSGPLLGAGAARRPAR 2229
            MW+AAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRAL+EAEDEHAAMLVQAG DARRRQCMSRTRGECVAAL NFLPALRKRLFLAVDVTGPVRELKALRTGM GATAXXXXXXXXXX  XXXXXXXXXXXXXXXXX      AAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLR +NDDDITPGSSTETAASLP GNPG M SPS                  AVR GAGASDWSGGA TAGLALSME RHSLLS+TYEHVLGDGLR LVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYG          AVGEGLGRSSG+RHALLLRYIINPSDGIGG+AAAATT APAPTNDTTLEGVI NG+ T  DTASAG TAG RNGG SSLG        A G LLQG GEVL+ETWDTAESPNF AALQARQPAARK LY T+                        CLDATFGMVYEQLRQKAFCRGSTT XXXXXXXXXXXXXXXXX          PSE TA XXXXXXXXXXXXXXXXX  GGLPAG            VGFVAAAPAVAEREESAQVLATVISQAKLVVSEILEASPGNEYA AVASLPSVQDLCFSVFSGGAA A+AGGTQL+ NP A       GPR ISSP PNAA RS GGVGD G PPQ+PL VGSAGGFGG        DSSG LLGA AARRPAR
Sbjct:    1 MWKAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALREAEDEHAAMLVQAGRDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTGMTGATAXXXXXXXXXXGGXXXXXXXXXXXXXXXXXAVADGSAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRTSNDDDITPGSSTETAASLPHGNPGTMSSPSPLTTTTRNGVPAPPA---AVRLGAGASDWSGGAVTAGLALSMEGRHSLLSATYEHVLGDGLRTLVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGGGDFNGVGGAVGEGLGRSSGIRHALLLRYIINPSDGIGGIAAAATTAAPAPTNDTTLEGVIVNGSVT--DTASAGSTAGGRNGGVSSLGGGAGVGGTASGTLLQGVGEVLNETWDTAESPNFGAALQARQPAARKTLYLTVWNTYVLFRDTSLGLKLSTGVVEVSCLDATFGMVYEQLRQKAFCRGSTTGXXXXXXXXXXXXXXXXXDVGGGRAAGLPSEPTAPXXXXXXXXXXXXXXXXXXSGGLPAGVAAAHAAGGGGAVGFVAAAPAVAEREESAQVLATVISQAKLVVSEILEASPGNEYAQAVASLPSVQDLCFSVFSGGAATASAGGTQLYNNPTAXXXXXXXGPRVISSPSPNAAVRSEGGVGDRGLPPQDPLRVGSAGGFGGXXXXXXXXDSSGLLLGAAAARRPAR 767
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: D7FTT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT5_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 5.240e-159
Identity = 373/465 (80.22%), Postives = 380/465 (81.72%), Query Frame = 1 
Query:  850 MEARHSLLSSTYEHVLGDGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGXXXXXXXXXAAVGEGLGRSSGVRHALLLRYIINPSDGIGGMAAAATTTAPAPTNDTTLEGVIANGTGTGTDTASAGGTAGVRNGGASSLGXXXXXXXXAGGVLLQGAGEVLDETWDTAESPNFAAALQARQPAARKLLYFTICLDATFGMVYEQLRQKAFCRGSTTXXXXXXXXXXXXXXXXXXXXXXXXXXX--PPSELTAXXXXXXXXXXXXXXXXXXDGGGLPAGXXXXXXXXXXXTVGFVAAAPAVAEREESAQVLATVISQAKLVVSEILEASPGNEYAHAVASLPSVQDLCFSVFSGGAAAAAAGGTQLHINPVAAAGPRGISSPHPNAAARSGGGVGDVGFPPQEPLPVGSAGGFGGGG---IGVGGGDSSGPLLGAGAARRPAR 2229
            MEARHSLLSSTYEHVLG GLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYG XXXXXXXX AVGEGLGRSSGVRHALLLRYIINPSDGIGGMAAAATTTAPAPTNDTTLEG++ NGT +    ASAG TA  RNGG SSLGXXXXXXX AGG LLQG G+VLDETWDTAESPNFAAALQ+             CLDATFGMVYEQLRQKAFCRGSTTXXXXXXXXXXXXXXXXXXXXXXXXXX   PPSE  AXXXXXXXXXXXXXXXX  DGGGLPAGXXXXXXXXXXX       APAVAEREESAQVLATVISQAKLVVSEILEASPGNEYAHAVASLPSVQDLCFSVFSG           L+ NP               AA RSGGGVGD   PPQEP  VGSAGGF       +GVGGGDSSGPLLGA A RRPAR
Sbjct:    1 MEARHSLLSSTYEHVLGGGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGXXXXXXXXXAVGEGLGRSSGVRHALLLRYIINPSDGIGGMAAAATTTAPAPTNDTTLEGIVVNGTAS----ASAGATAEGRNGGVSSLGXXXXXXXTAGGTLLQGVGKVLDETWDTAESPNFAAALQS-------------CLDATFGMVYEQLRQKAFCRGSTTXXXXXXXXXXXXXXXXXXXXXXXXXXAAGPPSEPKAXXXXXXXXXXXXXXXXSGDGGGLPAGXXXXXXXXXXXXXXXXXXAPAVAEREESAQVLATVISQAKLVVSEILEASPGNEYAHAVASLPSVQDLCFSVFSGXXXXXXXXXXXLYNNP---------------AAVRSGGGVGDRDLPPQEPPRVGSAGGFXXXXXXXVGVGGGDSSGPLLGAAATRRPAR 433
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: D7FTT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT6_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.430e-84
Identity = 189/197 (95.94%), Postives = 190/197 (96.45%), Query Frame = 1 
Query:    1 MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALTNFLPALRKRLFLAVDVTGPVRELKALRTGMAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHIL 591
            MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAAL NFLPALRKRLFLAVDVTGPVRELKALRTG+AGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      AAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHIL
Sbjct:    1 MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTGLAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADGS-AAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHIL 196
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: A0A835Z151_9STRA (Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z151_9STRA)

HSP 1 Score: 180 bits (456), Expect = 8.680e-45
Identity = 172/515 (33.40%), Postives = 224/515 (43.50%), Query Frame = 1 
Query:   19 DAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALTNFLPALRKRLFLAVDVTGPVRELKALRTGMAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRRTNDDDITPGSSTETAASLPDGNPGMMPSPSXXXXXXXXXXXXXXXXXXAVRQGAGASDWSGGAATAGLALSMEARHSLLSSTYEHVLGDGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGXXXXXXXXXAAVGEGLGRSSGVRHALLLRYIINPSDGIGGMAAAATTTAPAPTNDTTLEGVIANGTGTGTDTASAGGTAGVRNGGASSLGXXXXXXXXAGGVLL--QGAGEV---LDETWDTAESPNFAAALQARQPAARKLLYFTICLDATFGMVYEQLRQKAF 1548
            D  R A RFA RHRRAI +  V  AA   Y  ++ ALKEAE   A    ++  + R R  + R R EC  A+ NFLP LR RL+   D++ PVR LKALR     A +                                    A    +    E ELW++VKVT+ TRL++S+YAF+AL LML +Q+HILGR S EE+ ELL R                        G    P  XXXXXXXXXX          +G GAS            L M+AR + LSSTYE +LGDGLRAL  DVE AV  C+  W   ++  V +++L  ++RRVR EVEG +GG+A            AA G+            LLRYIINP D +                                            + GAS                L  +  G+V   L+ETWD  ESPNF+ A++              CLD  F ++Y ++R++ F
Sbjct:    7 DHLRTAVRFAHRHRRAIALSCVAAAAVTCYCKVQAALKEAEAIQAEFAERSAKERRFRLYLGRARAECRTAILNFLPTLRSRLYATADISRPVRALKALRQSRDAAASAQGEGGDP----------------------------APPPSEEDPAEAELWDEVKVTSFTRLLLSMYAFSALNLMLRLQMHILGRYSYEEASELLKREA----------------------GQKQQPGTXXXXXXXXXX---------ERGVGAS------------LPMDARRAFLSSTYEFLLGDGLRALAADVEAAVRTCSADWHCQSKLAVGWEELAGMLRRVRAEVEGGVGGAA------------AAAGDAQAAQDP-----LLRYIINPIDELPAAXXXXXXXXXXXXXXXXXXXXX------------------XLSSGASPANPLQRPPAQPXSPPLSPRAQGQVRMMLNETWDVVESPNFSLAMKD-------------CLDCAFDVLYRRMRERVF 402
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: K8YNM0_NANGC (Peroxin-3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNM0_NANGC)

HSP 1 Score: 79.7 bits (195), Expect = 4.440e-13
Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 1 
Query:   43 FARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARR------RQCMSRTRGECVAALTNFLPALRKRLFLAVDVTGPVRELKALRTGMAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRRTNDD 648
            F +R+RRAI  G + GA+A  + + +  +K   D++  ++ +  HD  R      +  M R+RGECV AL NF+  LRKR++  VDVT PV+ LKA R G++                                               +  E  LW QVKV+  +R  ++ Y FN L +ML +Q+HILGR + E S++ +L+    D
Sbjct:   10 FLKRNRRAI--GLIAGASAAGFAAWR--IKRVLDDYKRIIRE--HDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLS-----------------------------------------------KQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRD 164
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: W7TYS6_9STRA (Peroxisomal biogenesis factor 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYS6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.040e-11
Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 1 
Query:   43 FARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARR------RQCMSRTRGECVAALTNFLPALRKRLFLAVDVTGPVRELKALRTGMAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRRTNDD 648
            F +R+RRAI  G + GA+A  + + +  +K   D++  ++ +  HD  R      +  M R+RGECV AL NF+  LRKR++  VDVT PV+ LKA R G++                                               +  E  LW QVKV+  +R  ++ Y FN L +ML +Q+HILGR + E S++ +L+    D
Sbjct:   10 FLKRNRRAI--GLIAGASAAGFAAWR--IKRVLDDYKRIIRE--HDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLS-----------------------------------------------KQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRD 164
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: A0A2R5G1R0_9STRA (Peroxisomal biosis factor 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1R0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.030e-5
Identity = 69/283 (24.38%), Postives = 115/283 (40.64%), Query Frame = 1 
Query:  199 MSRTRGECVAALTNFLPALRKRLFLAVDVTGPVRELKALRTGMAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRRTNDDDITPGSSTETAASLPDGNPGMMPSPSXXXXXXXXXXXXXXXXXXAVRQGAGASDWSGGAATAGLALSMEARHSLLSSTYEHVL--GDGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEG 1041
            ++R R EC + +  F+P LR  +    D       LKA+R                                           +A + E++    ++LW+++KV +L RL+VS+YA   L  +L +QLHILGR + EE+  +  RR    +    S T  AA +     G+                          +GA ++      +T GL +S   R S L S  +H +  G G+  ++  ++ ++ R T  W   T   V   D++ +I ++R EVEG
Sbjct:   68 LARVRAECGSMILTFVPPLRNMVKKLTDPKPVTERLKAVRLKRKNE----------------------------------GMPSAQDEEEV----MQLWDELKVISLARLIVSIYALGLLNCVLRIQLHILGRYAFEEA--ISQRRA---EAAASSETADAAGVKQLEAGV--------------------------EGAASASHVSEEST-GL-VSQRLRESFLFSGSDHFMNSGSGMETMLYHIQESIQRATKDWHMGTDATVNRWDILNMIDKIREEVEG 279
[Close]
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Match: A0A8K1C5L1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5L1_PYTOL)

HSP 1 Score: 58.5 bits (140), Expect = 4.600e-5
Identity = 55/209 (26.32%), Postives = 86/209 (41.15%), Query Frame = 1 
Query:    1 MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACV---YHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALTNFLPALRKRLFLAVDVTGPVRELKALRTGMAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQ 618
            MW A   A      F RRH++ +V  GV  A+ CV   Y+  KR + EAE     +  Q     R +  ++ T  E  A +  FLP L+K L+  VD+   V+ELK L                                                    + + ++LWEQ K+TA+TR   +L AF    L++  Q+ I+G+ + E+++
Sbjct:    1 MWSALEHATARVCGFVRRHKKLVVATGV--ASLCVGGVYYGYKRMVTEAERFGLQLQRQMAEHQRLQLSLASTTEESNATIQRFLPRLKKTLYQLVDLESIVQELKTLDKAQ------------------------------------------------KPKRIQLWEQAKLTAVTRYFTALIAFGLWHLLVFAQIAIIGKRTFEKNK 159
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig192.6134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L882_9PHAE0.000e+079.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT5_ECTSI5.240e-15980.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTT6_ECTSI1.430e-8495.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z151_9STRA8.680e-4533.40Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
K8YNM0_NANGC4.440e-1331.25Peroxin-3 n=1 Tax=Nannochloropsis gaditana (strain... [more]
W7TYS6_9STRA1.040e-1131.25Peroxisomal biogenesis factor 3 n=2 Tax=Monodopsid... [more]
A0A2R5G1R0_9STRA1.030e-524.38Peroxisomal biosis factor 3 n=1 Tax=Hondaea fermen... [more]
A0A8K1C5L1_PYTOL4.600e-526.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig192contigEcto-sp13_S_contig192:209..9832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score68.9
Seed ortholog evalue1.1e-08
Seed eggNOG ortholog164328.Phyra80388
Preferred namePEX3
Model size3470
KEGG koko:K13336
KEGG TC3.A.20.1,9.A.17.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005783,GO:0005829,GO:0005886,GO:0005887,GO:0006082,GO:0006605,GO:0006612,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0009058,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0012505,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016557,GO:0017038,GO:0019216,GO:0019222,GO:0019752,GO:0030497,GO:0030674,GO:0031090,GO:0031224,GO:0031226,GO:0031231,GO:0031300,GO:0031301,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031903,GO:0031974,GO:0031981,GO:0032581,GO:0032787,GO:0032991,GO:0032994,GO:0033036,GO:0033365,GO:0034248,GO:0034250,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044085,GO:0044087,GO:0044091,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045033,GO:0045046,GO:0045184,GO:0045834,GO:0046394,GO:0046889,GO:0046890,GO:0046907,GO:0046983,GO:0048308,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0060090,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072330,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0080090,GO:0090150,GO:0090153,GO:0090154,GO:0098588,GO:0098805,GO:1901576,GO:1905038,GO:2000303,GO:2000304
Exons9
EggNOG free text desc.Peroxin-3
EggNOG OGs3QIVA@4776,KOG4444@1,KOG4444@2759
Ec32 ortholog descriptionPeroxin-3 domain
Ec32 orthologEc-25_001480.1
Cds size2232
COG Functional cat.MU
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig192.6134.1prot_Ecto-sp13_S_contig192.6134.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig192 1447..9832 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462977.4320393-UTR-Ecto-sp13_S_contig192:208..14461681462977.4320393-UTR-Ecto-sp13_S_contig192:208..1446Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig192 209..1446 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462977.4564772-CDS-Ecto-sp13_S_contig192:1446..18421681462977.4564772-CDS-Ecto-sp13_S_contig192:1446..1842Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 1447..1842 -
1681462977.4657834-CDS-Ecto-sp13_S_contig192:2722..30651681462977.4657834-CDS-Ecto-sp13_S_contig192:2722..3065Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 2723..3065 -
1681462977.4746099-CDS-Ecto-sp13_S_contig192:3673..39891681462977.4746099-CDS-Ecto-sp13_S_contig192:3673..3989Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 3674..3989 -
1681462977.483154-CDS-Ecto-sp13_S_contig192:4813..50311681462977.483154-CDS-Ecto-sp13_S_contig192:4813..5031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 4814..5031 -
1681462977.4923003-CDS-Ecto-sp13_S_contig192:5393..57601681462977.4923003-CDS-Ecto-sp13_S_contig192:5393..5760Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 5394..5760 -
1681462977.50332-CDS-Ecto-sp13_S_contig192:6271..63621681462977.50332-CDS-Ecto-sp13_S_contig192:6271..6362Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 6272..6362 -
1681462977.5113373-CDS-Ecto-sp13_S_contig192:7181..73881681462977.5113373-CDS-Ecto-sp13_S_contig192:7181..7388Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 7182..7388 -
1681462977.5197074-CDS-Ecto-sp13_S_contig192:8083..82421681462977.5197074-CDS-Ecto-sp13_S_contig192:8083..8242Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 8084..8242 -
1681462977.5287306-CDS-Ecto-sp13_S_contig192:9697..98321681462977.5287306-CDS-Ecto-sp13_S_contig192:9697..9832Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig192 9698..9832 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig192.6134.1

>prot_Ecto-sp13_S_contig192.6134.1 ID=prot_Ecto-sp13_S_contig192.6134.1|Name=mRNA_Ecto-sp13_S_contig192.6134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=744bp
MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEH
AAMLVQAGHDARRRQCMSRTRGECVAALTNFLPALRKRLFLAVDVTGPVR
ELKALRTGMAGATAAAAAAAATKDGGAGGGTGSSSSGSGGGGSAVADGSA
AAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRL
SLEESQELLLRRTNDDDITPGSSTETAASLPDGNPGMMPSPSPPPTTTTR
NGVQIPPPPAAVRQGAGASDWSGGAATAGLALSMEARHSLLSSTYEHVLG
DGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIG
GSAYYGGGGDFYGGGAAVGEGLGRSSGVRHALLLRYIINPSDGIGGMAAA
ATTTAPAPTNDTTLEGVIANGTGTGTDTASAGGTAGVRNGGASSLGGGAG
VGGAAGGVLLQGAGEVLDETWDTAESPNFAAALQARQPAARKLLYFTICL
DATFGMVYEQLRQKAFCRGSTTGGGRRQHRGAAAAAAGSEDAGGGRAAGP
PSELTAPPSEPAGATTGPAVGTSGDGGGLPAGAAAAHAAGGGGTVGFVAA
APAVAEREESAQVLATVISQAKLVVSEILEASPGNEYAHAVASLPSVQDL
CFSVFSGGAAAAAAGGTQLHINPVAAAGPRGISSPHPNAAARSGGGVGDV
GFPPQEPLPVGSAGGFGGGGIGVGGGDSSGPLLGAGAARRPAR*
back to top

mRNA from alignment at Ecto-sp13_S_contig192:209..9832-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig192.6134.1 ID=mRNA_Ecto-sp13_S_contig192.6134.1|Name=mRNA_Ecto-sp13_S_contig192.6134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9624bp|location=Sequence derived from alignment at Ecto-sp13_S_contig192:209..9832- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGCAGGCGGCAGGGGATGCGGCTAGGGCGGCCGGGCGCTTCGCCCG
GCGCCATCGGCGAGCCATCGTCGTAGGTGGAGTGGTGGGAGCGGCTGCTT
GCGTCTACCACAGCATGAAGAGGGCGCTGAAAGAGGTGGGAATGATCTGC
TTGCTTGCACCATGCGATGATGGATCGTCACAGGAGGAAGGTAGAGGAGA
GATGATGTTCAGGGAGAATTTCTCAGCTGGATCCTGTCGTGGTGGAGGGC
CTATACGTGCTGTCCGTAGAGCAACTTCTGTGCGTATGTTGCCGTATTGA
AACGATGTGCTACAACAGACGCGCACACGATTCAAATCTTGCGCCCAATA
CGGCCGTCTCACACAGACAAAATCTGTACTGCATCATCAACTGGCGGCGT
GTTTACAAGCCATACACCAATAGCAGACGGAGAGTAGTACAGGCATGCAT
CCAGTAGCTCGCCTCATCGCGATTTGTGACGCTTTGCTACAGTACAGCTA
CGCGAGCATCTGCTCGTCGGACGCCCACACCTCGCAAATCATTTCGGAAG
ACCCCACGGCCGTACCATGCGCGTATAAGCAACTCAATCAACTTGCACGC
CCTCGCATATCGGATACGATGAGAGGGAGCAGCGGTGCCCTCGGCCTGTC
TACCACACTGCCTCCTCGTCTGCTCGAAACCACTCTGCCTTGGATATTGT
TTGTTGGTGCCGCATTTGTGTCGGCTTCAAGTGGGCGCACCGGTCAAAAA
AGGTCTTCCCCAAACCCAACCTCCAGCCGACCCCACTCCTCCATGTGGCC
TGCTGCTGTTGCAACGACTAGCAGCCCGTAATGATGGGGCCTACTTCGCC
TCTCGCACTCTACGCAACCAGTTTGTCCCCGTTGGTATCCATCCACATTC
AGTGCTAGACCTTCCGTTATAGAAAATACGAAAATACGGTAGTACCGTAT
GTTGCGTAAGATACCATACCCTCAGGGGCGATTTTCAAAGCCCGATCATG
TGCTCAAGAACGAAGAGGATGTGATGGATCAAATGATAGGTTCTCGGAAA
ACCACTACATGGACGAGAGGGTTCCAACGCCGTCATTTTCGGCACCATCA
CCGTTTTTCTTACAGCGCAGTCGAGCTTTTGACAATCGGGTGTGCTACAG
TATATTACGGACGCAAACTACATTTACGTGACACAGTCACCGAAAGACTA
GAAGCACTGTTGGAAAATGTCCCTCAGTTGGAAAGGATGTGTTGGAAGCC
TTACAATGAATCTTAAAGAGCTTGAGCTCCGAAGCTCTGAAAATCGGTCA
AGGGAGTGTGGTATATTGTGCAACCTACGGCATTCATGAATCACCTGCAA
TCACCCGTTCGAGATACAAAAATCCCCAGTCAGAAGGGACGTGTTGGAAG
CCTTTATGATTAATGGTACAGTAATTCTTGGGGAGTCAGAGACGAATCTC
ACCTATGATGGATCCTCAAGAACAACGATGGAAAGTAGATGTGTACTTGT
TCCCAGCGTTCGCCAAGCAATACAGAAGCAATACCTCTCGGGGAGTAATC
AGAGACACCAACTCTCCTTATCGTCAAATCTTTTCAACAGGCCGAGGACG
AGCACGCGGCCATGCTGGTCCAGGCGGGACACGATGCGAGGAGGAGGCAG
TGCATGTCCAGGACCCGCGGGGAGTGCGTTGCCGCCCTGACCAACTTCCT
ACCGGCCCTGAGAAAACGCCTCTTTCTTGCTGTAGATGTCACCGGTCCGG
TAAGGTTTTGAACGTCGCATCGCGCATGCCCGATCGCTGCTGTCTTTGTC
GACGACGGGCTCTTCTGAACATTGCATCTGTTGGCTTGTGACCACGCAAG
GCGTCCGTTTCAGTTGGACCGGTACGGATATTCGAAGGCTGGAACGGTTT
TTAGTGTGAAGACAAGACATCAACAACAACAACAACAACAACAACGAACA
CAATCTTTCATGCTCACTCCTCGTCTTTGGGGACGGTGGGCTCTTTGAAT
ATCGCATCGTGCATGCTCGTTCACTGTCTTTGGGGACGCTGGTGACTTGT
CGCCATGTGGATGTAACTGTTTGGAGTAGTTGTGACCACTGAAGGCGTGC
GAGTCGGTTGAAGCGGGTGTTGATATTGGAACGCACCGTTCAGAGATCGG
AACAGTGTTTCATGTGGAGACAACGGCCACCACAACAGCAGCAAATCTAT
TTTTATCCGATTCCTTTCGGTTTGCACGCCGACAAAAGCAGTAGCCGAAA
GAGGCGCGGTGGAAGGGGAGACCCCTCTCCACCACGGATACCCTTTCAGC
GATGCCGTAAAATCGCAATTTCGAAGGTAGGGTCGGCCCCAGGGCGTTCT
CCTACAGCTTTCCGGCTTAGCGAGAAGGAATCTATCTTGCTGTGCTTTTT
TTTTTCACTTTCGGCGAATGCTGCCTGCCGTGTACAACAAACAGGTCCGA
GAGCTAAAAGCTCTGAGGACTGGGATGGCGGGAGCTACTGCAGCTGCGGC
AGCGGCGGCGGCTACGAAGGATGGAGGGGCAGGGGGCGGCACCGGCAGCA
GCAGCAGCGGCAGCGGGGGGGGCGGGAGCGCGGTCGCCGACGGTTCGGCA
GCGGCAGAGGCGGAAGATCTACAGTCTCGTGAGGTGGAGCTGTGGGAGCA
GGTGGGACTTGGTCATTTTCGTTAATTTTTTTCAGCTCATGCGTTGGTTA
TTGTTATTGTTGTTGTCGTCCCCACTTTGAACATTGTAGTCGTTCCGGTC
GCGTCTCAGTACCTTCCAATGCAATTCGTTTTTTTCGTAGGACGGTGTGG
TTTACCGTACGCTTTACGGTTTGCCGGCCTTAGGCATGCGATATATGGCG
GAGCACACCGTGGACGATGGCCGGTTTTCCAGACGGCATGGTTTACTGGG
CGCCATACGGTTTGCCGGGTGTAGGTTGAACGTATGCGGTTGCTGTGAGT
TTGAGCACACCGTGGATGATGATCGTTTCCTGACGGTATGATTTTACAGG
CTCTAGGCGGTTTATCTCTATTTTTGAGTAGCATTTGAGCGGCTCCCAGT
GCGAAGACCGTGTTCATGTAGTCGCGGAATATCCGGTGTATAAGGAGGAG
AGGGAAGTGTACATGACTGAGCTGGGACAGGTAGAAGGAAGGTACAGGGA
GATGTTTTGAAGCATGGAATAGCCAGGAGAAGATGGTAGCTGTGCTGGGG
CACAGGAGGTGGGTTGAAACGGCGGGAAGTGACATCGATAGGATATAAAT
AGCTAGGGATGAACTTTTTTGAGCTACCTATGTCAAAGCAGGAATAAACG
GTTGGCCGTCGGTGCTCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAG
GACGCGTGGTCAATGGTCTAGCCGCTATGGCTTGCCAAACATAAGAGTGC
CCCCCCCCCCCCGTTCAACAGACTCTGCTTACCCACCAACCGCCCTGTTC
CGTCCCGTGAATTCTTTCAGGTGAAAGTGACGGCGTTAACTCGACTAGTG
GTGTCCCTGTACGCGTTCAACGCCCTCGCGCTCATGCTGCACATGCAGCT
GCACATTCTCGGTGAGCAACGTTTTTTTCTACAGGGGGGGAGGGGGGGCA
GGGGTTACTCATGTGTACGGATGGCCAAGTCGTTAGACCGTAGACCCCGC
TTCCGTGCAACGCTGGGACGGAGCGGTAAACCGGGTTTATACCGGGTTTC
CGCCGGCCCAGGCAACGTTTCGCAAGGATCAACAAGAAGCTGGCCATCAT
CCTTGCATTTGTTGTGCCAAATGAGCGACCCACAAATGCAGTGGGGGGGG
GGGCGTACTCTTGGGTTTTTCATGCCTCAGCGCTAAGACCATCCACCACG
CGTCCTCGAGAGGACGGAGCATTGTTCCCACAGGACGGATCACGATTGGC
CAATCGTTCCTCCCTACTTTTCTGGGAGCGGTGGGGGAGCGCAAACATCT
TGCTGGTCATCAAATGCCCTCAAGAAGCATGGGTATGGACCATCGGCACG
AAAAACATCCCCACCTCATCTCGCTGTACCCCCCCTCCCCCCCCCCCCCC
AACCGCGTCCGAACCCCCGTAGGGAGACTCTCTCTCGAGGAATCGCAGGA
GCTGCTGCTGCGAAGGACCAACGACGACGACATCACCCCCGGCAGCAGCA
CCGAAACCGCCGCAAGCTTGCCCGATGGAAACCCGGGGATGATGCCGTCC
CCATCCCCCCCCCCCACCACCACCACACGGAACGGCGTACAAATACCACC
TCCGCCAGCGGCGGTGAGGCAGGGAGCGGGGGCTTCTGATTGGTCGGGGG
GCGCGGCGACGGCGGGGCTCGCGCTCTCAATGGAGGCGCGGCACTCGCTG
CTGTCTTCGACGTATGAGCACGTCCTGGGGGATGGTCTGAGGGCCCTGGT
TCGGGACGTGGAGCGCGCGGTGTCGAGGTGCACGTGTAGGTGCGTACGTT
CCGATTACATTCTCGCTAGCTGTTGCTGATGGTGGTACGTAGTCCTGCTG
CCGCTGCTGGCAATGATTTTTCACCTGTTGTTGTTGCTACGATGATGGTT
GTAGGCAGGTCTGCCGTAGTTGTCGGCATGGGGTGTTGCTTTCATCTGTT
GTTGTGCTTGCTGATGATGATGGCGATGTGTACTGCAGTGGTGAGGCTCT
CTTCTTGGTGATTTACAATGTCGGTCCCTCCCCCTCGGCTCCACCACGCA
ACCTTGAACTGTTAATGGCCTCACATACTCCCCGCTCATTCCACGCTCAC
CCCCACATCCATGCACGCTGCTTTTTCTGGTCGGCCGCGGCTGGGCGCCA
GCTGGAAGGCGCACACTCGGCAGCAAGTGGAGTTCCAAGACTTGGTAGCG
GTCATCCGCAGGGTGCGGCGAGAAGTGGAGGGGCCGATAGGGGGCTCCGC
GTACTACGGCGGAGGGGGCGACTTTTACGGGGGAGGGGCTGCCGTGGGGG
AGGGGCTTGGGAGATCATCTGGCGTAAGGCACGCCTTGCTGCTGCGGTAC
ATCATCAATCCTTCGGACGGTACGTTTTATTTTTTATTTGTAGGGGACAC
GGGGGGGCGAGGCTATTCATGAAGCGTGTAGCGCGCTCCCTTGTTGCACA
AAATTACTGCTGTTGTGGGTACTGCTGCTGCTGCTGTTGTTGCTGCCGTT
TGTATGCGCGGGGGGGGGTTAGGCGTACTCAGGGGGGGGGTGAGGAGGAG
TGAAGACGTTCTGTCGCAAGTTACGCCAAGGTACGTCAAGCCGAAGCCCC
GAGACTCGCAAGCGGCAGTGATCTTGGGATGTTTTTGTTTTCGGAGGGGG
GGTCATTTTTTTGGCATGAGGCCCGTTGGCGTCGTGTTTTCGTCGTTGTG
GGCGCATCCGTGTGATGTCCGTATCGTTTCGCCTGCTCTTTCAATTTGGT
TCTTCCTCTCCTCAAACTCTCTCTCTCTCCCTCTCTCTCCATCTCTCACA
CACGCTCTCTCTCTCTCTCGTTTCTCTCTTTCTTTCTCTCTCTCGCCTGC
TCTTTCAATTAGGTTCTTCCTCTCCTCAAACTCTCTCTCTCTCCCTCTCT
GTCTCTGTCGTTACTCCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCCC
TCTCTCCCTCTCTCTCTCTCTCTGTTGGGCATCCCTCTGAAGCAGACTGT
TCAAAACCGACTCCAACGTGGAAGAACGTAGCACAACTCAGAGCCGAAAG
CTACAACACGCCACGGCGTATTGTCGTAACGCCCAACACAATATTCGAAG
TGTGTTACACAAGACCCTACCGAATACATACGCTAAAAGACCCCAACACA
TGCATGACCCAACAACCCCCCAATTTTTTTTGTGATGACCCAGGTATCGG
CGGCATGGCGGCAGCAGCGACGACCACAGCACCAGCCCCCACCAACGACA
CCACCTTGGAAGGCGTCATCGCCAACGGCACCGGTACCGGTACCGATACC
GCCAGCGCCGGCGGCACGGCGGGGGTTAGGAACGGTGGCGCCTCCTCTCT
CGGCGGTGGTGCCGGTGTGGGGGGCGCCGCCGGCGGTGTCCTTTTGCAGG
GGGCGGGGGAGGTGCTCGACGAGACGTGGGACACCGCGGAGAGCCCCAAC
TTCGCGGCGGCGCTACAGGCAAGGCAACCGGCAGCCCGCAAATTGCTCTA
CTTCACAATGTGGATCACCTATTCATTGTTCCGAGAAATTTCCCTGGGTC
TGAAGTTGCCGACAGGTGTCGAAGTGGCTCGCGTTGTATGTTGGAAGTGT
GTTTTTTTTTTGGGCATTTTTTTTCGTTTGTCGAGAAGTAGTTCGGTTTC
CGGAAGGGATTTGACGTCGTTGTTCTTGCGTACGCGTGTTTGATGTTGGC
TTCTTCCCCTAGAAAGGGAAAATCTCAACAGAGATTGTGCTATTGTCGTT
GGTTGTCTTTATTGCGGGTGCAGCCGACGTTCCTGTTTTTGCAGCTTCCC
TCGCGTTTCGGTTGGATAGGCCTTGCCCCATTCTACCCGGGCGCCAAAAT
GCAGAACATGTAGACTTTTGAGTAGAAGTCGAGCATATTTGACCGAATTG
CGCATGTTTGGCGAAAAATCGAGCATTAATGTCACTTTTGGGCATTTTGT
GGAGTATAGTTGACCAAATTTAAAAAGTATATGCTCACGGAAAAAGAGGG
GGGGGGAAAAAAACAATATTTGCCAAGGACCTAATATTGAAGTACATCAA
TTGCTCGCCGAACCCCTTTCCCCTCTCATGAATGTTATTTTCTTTGCTCA
TCGAACCGCACGCAGAGCTGCCTCGACGCCACGTTCGGCATGGTCTACGA
GCAGCTAAGGCAGAAGGCGTTTTGCCGGGGGTCTACCACCGGCGGAGGGA
GGCGGCAGCATAGGGGGGCGGCCGCCGCTGCCGCTGGCAGCGAGGATGCG
GGGGGAGGGCGAGCCGCGGGACCCCCTTCTGAACTCACGGCCCCCCCTTC
TGAACCCGCAGGGGCAACAACGGGGCCAGCGGTGGGCACCTCCGGTGATG
GTGGTGGACTCCCGGCCGGGGCAGCTGCAGCGCATGCTGCGGGAGGAGGC
GGCACGGTTGGCTTTGTCGCCGCTGCGCCGGCTGTGGCAGAGAGAGAGGA
GTCCGCGCAGGTGAAGAGGCCGAGTTCGTTCATGTAGTGGTGTCAATGCG
AGGGAATCGTGTCGTTTACCGAGAGAAAGCAGCCAACGGGCCGGTAGCGG
CGGGGGGCGCGCGAAAAGGGATGGGGGTTTGTAGCTTGGGTTCTAGGTCG
GCGGGCAGGGGGGTAGAGGCAATACAGGTGGTTTACTTGTCGGGACATTT
GCTGCTTCAATTGTTCGCAGAATACAAGCATTCAATCAGGGAACACTACC
TGTTCTCCCTTACTATGCATAAAATCGTTCTGATTCGGGGCGCCGTTACG
TTTGTCGGGTTTTTGCTCCAGGCTGTGTGACAACGAGGGTGGCCCTGTTG
AACCGCAATCCCCCTTACGCTTCTGAAGAGAGGCAACTCACACTAGATAC
AAAAGTAACATCGCTCGGCGTTCGTATTTCGTTTTCGTCGCCCTTGCCCC
GGTTGCTTCTCGATCTCTCTCTCCCCCCACGTGTTTCCCCGTCTTCACAT
GTTCATTATGTCCCCCCCCGTATGGTTCAACGTACAGCGTGGGCCGGCGA
AAATGCCGGGATATCGCTCCGTCCCGCCGCTGTAGGGATGCGGGGTCCAT
GGTCTAACCACTACGGCATGCGTTTGCATGAGTACACCCCCCTGTCTCTG
TCTTTGCCCACGCTCCCTCGCTTTGCCAGTCGCCTTCGCATTTTTTTTTT
CCCATAAAGTTAACATGTTGGAGAAAACATGCAATCGAGGAAAATTGGGT
TATAGGGAAGGAGGGTCTGCGTTCCCCCCCCTCCGTGTTATGTTTCCGTA
TGAGCTTGATTTCTCGCAAAGGCGGTCTCCAGCTCTCTCTCGCTCATCTA
GACTCGCGGCGGCTGCGGCCGGCGCTAAACCCGCGCGCAGGTCCTCGCCA
CCGTGATCTCTCAAGCCAAGCTGGTCGTCAGCGAGATCCTGGAAGCTTCC
CCGGGCAACGAGTACGCACACGCGGTGGCGTCTCTCCCCTCCGTCCAAGA
CCTGTGCTTCTCGGTGTTCTCCGGTGGGGCGGCCGCAGCAGCAGCGGGGG
GGACGCAGCTGCACATCAACCCTGTTGCTGCTGCGGGACCCCGTGGCATC
TCCTCCCCTCACCCGAACGCTGCTGCGCGTAGTGGCGGTGGCGTTGGGGA
TGTTGGCTTCCCTCCTCAAGAACCGCTGCCTGTGGGAAGCGCCGGAGGGT
TCGGAGGAGGCGGTATTGGTGTGGGAGGGGGCGACAGCAGCGGGCCGCTG
CTGGGCGCCGGCGCTGCCAGACGACCGGCTCGATGACGTTACACGGGCTA
GATGACGGATTTTTTCAACCGGCTCGATGACGTCACACACGGGGGTTGGT
GACAGTTTTCAACCGGCTCGATGACGTCACACACGGGGGTGGGTGACATT
TTTCAACCGGCTGGATGGCGCCACACACGGGCTTGGTGACATTTTTCAAC
CGGCTCGATGACGTCACACACGGGCTTAATGACGGGTTTCTCCAAGGGTG
CCTTGTGCAGGTGGCAATGCAACAACGATTTTCGTGGCAGGCAAGGCAAG
ATGGTTGTCAGAGTGAGACGCACAGCACACTTTCCGCCACCGACCGCCGT
CGTAACAACGGGACTGGCTCGCAGCAGCGAATTGGGTGGCTGGTATGCCT
TGCGTGGAGATCGCAGTGCAATAAGTTGCATGGAGCTTGCAGTACATCAT
TTTTTCAAGCAAGCGGACGAAGCCAGTGTTGCCAGTCCCGAACCCCCCTT
TTTTTTGTTTTTTTTCGCGTTGGGCTTCAAGTTTGAGAGTTCGCCGCTGG
GGAACCTTAGACCTACGGGAGCTCTCGGCATCCCATGGAACAGCACTTTT
TGGCCGTTTCTTCGAGTGTCTCCTTGGAAAACCGGTTCACTTGTAGTGAG
GTGTACTCATGCAAACGCATGCCGTAGTCGTTGGACCGTTCACGCGGCAT
CCCTACAACACCGAGACGGTTCCCTTGTGGTGGTGAGGGGTTATCATTTG
TGAGGGGCATCGTAGACGAAACTTTGACCTACCACACGTTTTTGAGTCGT
GGGGGCCGCCTTATCGGAGTTTTTGTTTTGGAGGTGAACCCGTAGGGAGG
CCGAGGTAAATGTAATTGTAGAGCATGGATCGGTCTAGTTGTACAAGTAC
CCATGATGCGAAGCGACTACATCTCTTACTCAGCCTCTCGTCTTGATCCA
TCGCCATTTTGAGTGATTTGACCCGTAGCAACAGGACTTGATTTTGATCA
GTTGGAGCGCGGGGCCAAGTGTATGCTCCGGGGGGATCTCTTATGTTTAT
GGTCCATCGCATGTGCCGCTACCGAGCCCGCACCTGTCCATACACGAGAC
ACCACCTTCCATGAGTTTACCCTTCCTTGTTTCTCTTTGTTTCTTCCTTT
TTATGAAAAATAAAAACAAAAAAGCCCCATCGATCGACACGGGTAGGATA
GACTTGAGTGCATCTATTCCGTCGATACTTTTTGTTAAGTTGTATTGGAA
GATATTTTCACTGTTCGTTTGTTT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig192:209..9832-

>mRNA_Ecto-sp13_S_contig192.6134.1 ID=mRNA_Ecto-sp13_S_contig192.6134.1|Name=mRNA_Ecto-sp13_S_contig192.6134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2232bp|location=Sequence derived from alignment at Ecto-sp13_S_contig192:209..9832- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGCAGGCGGCAGGGGATGCGGCTAGGGCGGCCGGGCGCTTCGCCCG
GCGCCATCGGCGAGCCATCGTCGTAGGTGGAGTGGTGGGAGCGGCTGCTT
GCGTCTACCACAGCATGAAGAGGGCGCTGAAAGAGGCCGAGGACGAGCAC
GCGGCCATGCTGGTCCAGGCGGGACACGATGCGAGGAGGAGGCAGTGCAT
GTCCAGGACCCGCGGGGAGTGCGTTGCCGCCCTGACCAACTTCCTACCGG
CCCTGAGAAAACGCCTCTTTCTTGCTGTAGATGTCACCGGTCCGGTCCGA
GAGCTAAAAGCTCTGAGGACTGGGATGGCGGGAGCTACTGCAGCTGCGGC
AGCGGCGGCGGCTACGAAGGATGGAGGGGCAGGGGGCGGCACCGGCAGCA
GCAGCAGCGGCAGCGGGGGGGGCGGGAGCGCGGTCGCCGACGGTTCGGCA
GCGGCAGAGGCGGAAGATCTACAGTCTCGTGAGGTGGAGCTGTGGGAGCA
GGTGAAAGTGACGGCGTTAACTCGACTAGTGGTGTCCCTGTACGCGTTCA
ACGCCCTCGCGCTCATGCTGCACATGCAGCTGCACATTCTCGGGAGACTC
TCTCTCGAGGAATCGCAGGAGCTGCTGCTGCGAAGGACCAACGACGACGA
CATCACCCCCGGCAGCAGCACCGAAACCGCCGCAAGCTTGCCCGATGGAA
ACCCGGGGATGATGCCGTCCCCATCCCCCCCCCCCACCACCACCACACGG
AACGGCGTACAAATACCACCTCCGCCAGCGGCGGTGAGGCAGGGAGCGGG
GGCTTCTGATTGGTCGGGGGGCGCGGCGACGGCGGGGCTCGCGCTCTCAA
TGGAGGCGCGGCACTCGCTGCTGTCTTCGACGTATGAGCACGTCCTGGGG
GATGGTCTGAGGGCCCTGGTTCGGGACGTGGAGCGCGCGGTGTCGAGGTG
CACGTGTAGCTGGAAGGCGCACACTCGGCAGCAAGTGGAGTTCCAAGACT
TGGTAGCGGTCATCCGCAGGGTGCGGCGAGAAGTGGAGGGGCCGATAGGG
GGCTCCGCGTACTACGGCGGAGGGGGCGACTTTTACGGGGGAGGGGCTGC
CGTGGGGGAGGGGCTTGGGAGATCATCTGGCGTAAGGCACGCCTTGCTGC
TGCGGTACATCATCAATCCTTCGGACGGTATCGGCGGCATGGCGGCAGCA
GCGACGACCACAGCACCAGCCCCCACCAACGACACCACCTTGGAAGGCGT
CATCGCCAACGGCACCGGTACCGGTACCGATACCGCCAGCGCCGGCGGCA
CGGCGGGGGTTAGGAACGGTGGCGCCTCCTCTCTCGGCGGTGGTGCCGGT
GTGGGGGGCGCCGCCGGCGGTGTCCTTTTGCAGGGGGCGGGGGAGGTGCT
CGACGAGACGTGGGACACCGCGGAGAGCCCCAACTTCGCGGCGGCGCTAC
AGGCAAGGCAACCGGCAGCCCGCAAATTGCTCTACTTCACAATCTGCCTC
GACGCCACGTTCGGCATGGTCTACGAGCAGCTAAGGCAGAAGGCGTTTTG
CCGGGGGTCTACCACCGGCGGAGGGAGGCGGCAGCATAGGGGGGCGGCCG
CCGCTGCCGCTGGCAGCGAGGATGCGGGGGGAGGGCGAGCCGCGGGACCC
CCTTCTGAACTCACGGCCCCCCCTTCTGAACCCGCAGGGGCAACAACGGG
GCCAGCGGTGGGCACCTCCGGTGATGGTGGTGGACTCCCGGCCGGGGCAG
CTGCAGCGCATGCTGCGGGAGGAGGCGGCACGGTTGGCTTTGTCGCCGCT
GCGCCGGCTGTGGCAGAGAGAGAGGAGTCCGCGCAGGTCCTCGCCACCGT
GATCTCTCAAGCCAAGCTGGTCGTCAGCGAGATCCTGGAAGCTTCCCCGG
GCAACGAGTACGCACACGCGGTGGCGTCTCTCCCCTCCGTCCAAGACCTG
TGCTTCTCGGTGTTCTCCGGTGGGGCGGCCGCAGCAGCAGCGGGGGGGAC
GCAGCTGCACATCAACCCTGTTGCTGCTGCGGGACCCCGTGGCATCTCCT
CCCCTCACCCGAACGCTGCTGCGCGTAGTGGCGGTGGCGTTGGGGATGTT
GGCTTCCCTCCTCAAGAACCGCTGCCTGTGGGAAGCGCCGGAGGGTTCGG
AGGAGGCGGTATTGGTGTGGGAGGGGGCGACAGCAGCGGGCCGCTGCTGG
GCGCCGGCGCTGCCAGACGACCGGCTCGATGA
back to top