mRNA_Ecto-sp13_S_contig19183.6128.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: D7G3Y7_ECTSI (Bardet-Biedl syndrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y7_ECTSI) HSP 1 Score: 534 bits (1376), Expect = 1.790e-186 Identity = 277/283 (97.88%), Postives = 279/283 (98.59%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEAMETRSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSELIDS 849
AYHLKGRRDFSLKMPALVVQLEAMETRSTTCLLVALADGN+RLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAA GYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQF VSALIPGVSSRHEI ITNIDEGGAAGSVRILVLSPSGPSPLVSAVV+MPLSELIDS
Sbjct: 320 AYHLKGRRDFSLKMPALVVQLEAMETRSTTCLLVALADGNVRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAATAGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFMVSALIPGVSSRHEIAITNIDEGGAAGSVRILVLSPSGPSPLVSAVVNMPLSELIDS 602
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A6H5JZZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ3_9PHAE) HSP 1 Score: 332 bits (850), Expect = 6.120e-111 Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEAMETRSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGL 561
AYHLKGRRDFS+KMP+LVVQLEAMETR ALADGN+RLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKT GAA GYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGL
Sbjct: 123 AYHLKGRRDFSIKMPSLVVQLEAMETRC------ALADGNVRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTLGAATAGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGL 303
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A7S0JH86_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JH86_9EUKA) HSP 1 Score: 260 bits (664), Expect = 1.120e-82 Identity = 143/284 (50.35%), Postives = 195/284 (68.66%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVV---QLEAMETRSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSELI 843
A+H+KG++ F+L +P+ V QLE +TR+ LL+ LA+G +RLY EK+L+ TL+T EP+ ALRFG Y RE+ AL +V +G LTI ML R+ADL + P G PPEQD+PL +PKKTKLYVEQTQR + QA E+HR FQ+DLC LRL+ AR+YVK ITDG QG + + +SLRL AQ QGLGP FK+KL LQN G + +T+L TY+ +Y + + F + L+PGV R + + IDE G A ++R+ V S P++SAVV+MP+S+L+
Sbjct: 33 AFHIKGKKLFTLFLPSAAVCIEQLELQKTRAARALLLGLANGEVRLYQ-EKHLIATLQTGEPLTALRFGAYGREESALMLVGQSGALTIKMLQRQADLNS----ASNPLGPPPEQDVPLSIPKKTKLYVEQTQREREQATEMHRIFQRDLCKLRLSTARSYVKIITDG-QGPVSYTSGSSLRLTAQVQGLGPAFKVKLSLQNTGRKVVTDLVATLTYNAMLYRLRQSLFKIPLLVPGVMLRLDAELECIDEVGGADTIRVFVCSAKSSMPILSAVVNMPMSDLL 310
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A7S3EZY8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EZY8_9EUKA) HSP 1 Score: 243 bits (621), Expect = 2.000e-76 Identity = 132/279 (47.31%), Postives = 187/279 (67.03%), Query Frame = 1
Query: 10 LKGRRDFSLKMPALVVQLEAM---ETRSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSE 837
L G++ +S+ +PA + ++ + +TR+ LLVAL+ G +RLY EK+L+ TL+ EPI A+RFG Y RE+ AL V+ +G LTI ML R ADL + G PPEQD+PL +PKKTKLYVEQTQR + QA E+HR FQ+DLC LRL+ ARAYVK ITDG QG + A +++RL AQ QGLGP FK+KLELQN G R +T + V +Y+ +Y +++ F + L+PG++ R + + +DE G ++++ V S P +SA+V+MP+SE
Sbjct: 17 LLGKKMYSIYLPANISCMQVLSLSKTRNIRALLVALSTGELRLYH-EKHLVATLQFSEPITAMRFGAYGREEAALTVIGASGALTIKMLQRLADLEN----SSHSPGPPPEQDVPLSIPKKTKLYVEQTQREREQATEMHRVFQRDLCKLRLSTARAYVKIITDG-QGPMSYSAGSAMRLTAQVQGLGPRFKVKLELQNNGSRTVTGMAVTISYNSMLYRLKQCVFAIPVLVPGLTHRLDAAVECVDERGGTDAIKVFVCSAKSALPALSAIVNMPVSE 289
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A7S0LFK4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFK4_9EUKA) HSP 1 Score: 246 bits (628), Expect = 4.400e-74 Identity = 133/283 (47.00%), Postives = 190/283 (67.14%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEAMET--RSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSELI 843
A+H+KG++ +SL +P+ V +E +E R+ LL+ LA+G +R Y EK+L+ TL+ E + LRFGPY RE+ +L + +G +TI ML R+ADL A P G PPEQD+PL +PKKTKLYVEQTQR + QA ++HR FQ+DLC LRL+ AR+YVK ITDG QG + + +SLRL AQ QGLGP FK+KL LQN G + +T++ TY+ +Y +++ F + L+PGV R + + +DE G A ++R+ V S P++SAVV+MP+SE +
Sbjct: 305 AFHIKGKKLYSLFLPSPAVCIEQLELQKRAARALLLGLANGELRCYQ-EKHLIATLQLGETLTGLRFGPYGREESSLICIGESGSITIKMLQRQADLDS----AANPVGPPPEQDVPLSIPKKTKLYVEQTQREREQATDMHRIFQRDLCKLRLSTARSYVKIITDG-QGPVSYTSGSSLRLTAQVQGLGPAFKVKLSLQNTGRKVVTDMVATLTYNAMLYRLKQSLFKIPLLVPGVMLRLDAELECVDENGGADTIRVFVCSAKSSMPILSAVVNMPMSETL 581
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A7S1IQI7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQI7_9EUGL) HSP 1 Score: 240 bits (612), Expect = 1.790e-71 Identity = 131/284 (46.13%), Postives = 189/284 (66.55%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEA--MET-RSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSELI 843
+YH+KG++ +S+ MP + + A MET R+T +VALA+G IR+Y+A K+L+HTL+T + I L+FG YARED L + +G + I ML R A L K A P PPEQ+IP++VPKKT+LY+EQTQR K E+HR FQ+DLC LRL ARAYVK +TDG QG + + +SLRL A QGLGP FKIKL +QN G ++LT +P+ FT+++ IY M + L+P + +E+ + IDE A +R+ V +P+ P+++A+V+MPL++ +
Sbjct: 329 SYHVKGKKQYSVYMPCGITNMTALSMETMRTTKATIVALANGEIRVYNA-KSLIHTLQTNDIITGLKFGKYAREDNTLVIAYRSGTIHIKMLPRLASLEATKGQNAGP---PPEQNIPIRVPKKTRLYIEQTQREKEFGTEMHRVFQRDLCKLRLATARAYVKVLTDG-QGPLSYTSGSSLRLTAHVQGLGPLFKIKLNIQNTGTKSLTAIPIVFTFNQSIYRMPNPTLLLPLLVPSLVYNYEVDVECIDEAAGADVIRVYVCNPNSAIPIITALVNMPLADFL 607
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A8J5XY91_DIALT (BBS1 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XY91_DIALT) HSP 1 Score: 238 bits (608), Expect = 3.500e-71 Identity = 133/284 (46.83%), Postives = 184/284 (64.79%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEAMET---RSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSELI 843
AYH+KG++ SL MPA V +E + RS LLV+L +G +RLY +K+++ T+ +P +RFG Y RE+ ALA+V G L I ML R A+L AP G PPEQDIPL +PKKT+LYVEQTQR + QA E+HR FQ+DLC LRL ARAYVK +TDG QG + S+RL A QGLGP FK++L LQN G++ + +L + F+ + +Y + + L+P V+ R + + +IDE GA+ VR+ V +P+ P++SAVV+MPLSE+I
Sbjct: 298 AYHIKGKKSHSLFMPAPVAAIEVLSLERMRSVKALLVSLHNGEVRLY-VDKSIIATIHLDDPAVGMRFGAYGREEAALAMVGKAGTLVIKMLQRTANLES----SGAPPGPPPEQDIPLAIPKKTRLYVEQTQREREQATEMHRIFQRDLCKLRLNTARAYVKVLTDG-QGAQSYTVGQSVRLTAGVQGLGPLFKLRLNLQNLGNKPVVDLEMTFSANTMLYKLHTHVLQLPLLLPSVTYRCDCDVESIDEAGASDMVRVYVCTPTSKVPVISAVVTMPLSEVI 575
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A7S4FYB0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYB0_9EUGL) HSP 1 Score: 238 bits (606), Expect = 1.580e-70 Identity = 128/284 (45.07%), Postives = 189/284 (66.55%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEA--MET-RSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSELI 843
+YH+KG++ +S+ +P+ + + A MET R+T +VALA+G IR+Y+ K+L+HTL+T + + L+FG YARED L V +G + I ML R A L K + P PPEQ+IP++VPKKT+LY+EQTQR K E+HR FQ+DLC LRL ARAYVK +TDG QG + + +SLRL A QGLGP FKIKL +QN G ++LT +P+ FT+++ IY M + L+P + +E+ + +DEG A +R+ V +P P+++A+V+MPL++ +
Sbjct: 336 SYHVKGKKQYSVYLPSSITNMVALSMETMRTTKATIVALANGEIRVYNG-KSLIHTLETNDVVMGLKFGKYAREDNTLVVAYRSGTIHIKMLPRLASLEVTKGQTSGP---PPEQNIPIRVPKKTRLYIEQTQREKEFGTEMHRVFQRDLCKLRLATARAYVKVLTDG-QGPLSYTSGSSLRLTAHVQGLGPLFKIKLNIQNTGTKSLTEIPIVFTFNQSIYRMPSPTLLLPLLVPSLVYNYEVDVECVDEGAGADVIRVYVCNPHSAIPIITALVNMPLADFL 614
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A8K1CTH1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTH1_PYTOL) HSP 1 Score: 231 bits (589), Expect = 2.650e-68 Identity = 135/283 (47.70%), Postives = 182/283 (64.31%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEAME---TRSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSEL 840
+YHLKG++++SL MP ++ +EA T+ T +LVA +G++ LY+ E + TL T + + FG Y RED +L +V G L++ +L R A L + A G PPEQDIPL +PKKTKLYVEQTQR + A E+HR FQ+DLC LRLT ARAYVK I DG QG + A++RL+AQ QGLGP+F+IKL +QN G +A+T++ VAF YD ++Y K F + +IP V + +T I + GAA SV I V PLVSAVV+MPLSE+
Sbjct: 308 SYHLKGKKNWSLSMPDDIMLIEAFNLRRTKDTRGILVAFKNGDVVLYN-ENIKICTLNTDSSLTGMVFGQYGREDASLVLVQKGGALSLKILKRTASL---EAISEA-AGPPPEQDIPLNIPKKTKLYVEQTQRERDHATEMHRHFQRDLCKLRLTTARAYVKIIKDG-QGPVSYSTGAAIRLNAQVQGLGPSFRIKLNVQNAGTKAVTDITVAFHYDHELYRFTKSVFVIPLVIPNVQYTYLADVTCISDAGAADSVYIFVCGKDSCIPLVSAVVNMPLSEV 584
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Match: A0A024TEN6_9STRA (BBS1 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEN6_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.030e-66 Identity = 132/284 (46.48%), Postives = 179/284 (63.03%), Query Frame = 1
Query: 1 AYHLKGRRDFSLKMPALVVQLEAME---TRSTTCLLVALADGNIRLYDAEKNLLHTLKTQEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAAPTGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFTVSALIPGVSSRHEITITNIDEGGAAGSVRILVLSPSGPSPLVSAVVSMPLSELI 843
+YHLKG++++S+ MP +V LEAM T+ T +L+AL G I LY EK +H+ K + + A+ FG + RE+ +L +V TG LT+ +L R ADL A G PPEQD+PL VPKKTKLYVEQTQR + A E+HR FQ+DLC LRLT R+YVK I DG QG + A++RLHA+ QG+GP FKI L+LQN G + ++ P+A YD +Y + V L+PGV + + + ++ AA S+ I V PLVSAVV+MPLSEL+
Sbjct: 319 SYHLKGKKNWSMAMPHDIVALEAMNLRRTKHTKGILIALRKGEILLYH-EKIKVHSFKIEGSLTAMVFGQFGREEASLVLVHKTGALTLKILQRNADLEA----NATAAGPPPEQDVPLNVPKKTKLYVEQTQRERDHATEMHRHFQRDLCKLRLTTVRSYVKVIRDG-QGPVSYATGAAIRLHAKVQGMGPRFKIHLQLQNAGTKFASDAPLALHYDHTLYRVHPSLLIVPLLLPGVLYTYTVDVESVSP--AADSIYIFVCGKGSCVPLVSAVVNMPLSELL 594 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19183.6128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19183.6128.1 >prot_Ecto-sp13_S_contig19183.6128.1 ID=prot_Ecto-sp13_S_contig19183.6128.1|Name=mRNA_Ecto-sp13_S_contig19183.6128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=284bp AYHLKGRRDFSLKMPALVVQLEAMETRSTTCLLVALADGNIRLYDAEKNLback to top mRNA from alignment at Ecto-sp13_S_contig19183:730..3348- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19183.6128.1 ID=mRNA_Ecto-sp13_S_contig19183.6128.1|Name=mRNA_Ecto-sp13_S_contig19183.6128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2619bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19183:730..3348- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19183:730..3348- >mRNA_Ecto-sp13_S_contig19183.6128.1 ID=mRNA_Ecto-sp13_S_contig19183.6128.1|Name=mRNA_Ecto-sp13_S_contig19183.6128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19183:730..3348- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |