mRNA_Ecto-sp13_S_contig19180.6126.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19180.6126.1
Unique NamemRNA_Ecto-sp13_S_contig19180.6126.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: D7FP43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP43_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 4.490e-166
Identity = 230/244 (94.26%), Postives = 239/244 (97.95%), Query Frame = 1
Query:  103 MSRFVWLVLALGCTPGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASLVSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAIGQMG 834
            MSRFVWLVLALGCTPG RAASAGASHSCVVLVGGKIKCWGEN+WGQ+GQND+LVRGDDASDMGDSLPYVPLGEFEASLV+SGSEFSCALAVDG+VKCWGRNS+GQLGLGDNETRGGQDD+FEMGDNLPVLDLGTGVAV+SIALAGSHACAVL DGNLKCWGENEGGQLGLG TL RGNA GQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIA+GQMG
Sbjct:    1 MSRFVWLVLALGCTPGARAASAGASHSCVVLVGGKIKCWGENYWGQVGQNDNLVRGDDASDMGDSLPYVPLGEFEASLVASGSEFSCALAVDGAVKCWGRNSSGQLGLGDNETRGGQDDAFEMGDNLPVLDLGTGVAVESIALAGSHACAVLADGNLKCWGENEGGQLGLGDTLTRGNAMGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAVGQMG 244          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: A0A6H5KP75_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 4.780e-121
Identity = 188/239 (78.66%), Postives = 207/239 (86.61%), Query Frame = 1
Query:  121 LVLALGC-TPGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASLVSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAIGQMG 834
            + LA GC  P  RAASAGASHSC VLVGG IKCWGENFWGQ+GQND+LVRG +ASDMGD LPYV LG FEA +V+SGSEF+CA +VDG VKCWGRN+AGQLGLGDNETRGG +D FEMG++LPV+DLGTGV V+SI LAGSHACAV + G +KCWGENEGGQLGLG  LARGN TGQMGD+LP+VDLG  VL SSVALGARHTCAVV DG VKCWGNNDGGQLGYEDTAARG A G+MG
Sbjct:   87 VALAAGCCAPAARAASAGASHSCTVLVGGTIKCWGENFWGQVGQNDNLVRGKNASDMGDDLPYVQLGIFEADMVASGSEFNCARSVDGEVKCWGRNTAGQLGLGDNETRGGVNDVFEMGNDLPVVDLGTGVTVESIGLAGSHACAVTLIGLVKCWGENEGGQLGLGDKLARGNLTGQMGDDLPYVDLGTGVLASSVALGARHTCAVVDDGGVKCWGNNDGGQLGYEDTAARGTAAGEMG 325          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: A0A6H5KT35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT35_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 9.590e-100
Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 1
Query:  103 MSRFVWLVLALGCTPGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASLVSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLG 609
            MSRFVWLVLALGCTPG RAASA ASHSCVVLVGGKIK  GENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASLV+SGSEFSCALAVDG+VK W RNSAGQLG+G NETRGGQDD+FEM D+LPVLDLGTGVAV++IALAGSHACAVL DGNLKCW ENEG QLG
Sbjct:    1 MSRFVWLVLALGCTPGARAASAKASHSCVVLVGGKIK--GENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASLVASGSEFSCALAVDGAVKYWRRNSAGQLGVGGNETRGGQDDAFEMWDSLPVLDLGTGVAVENIALAGSHACAVLADGNLKCWVENEGRQLG 167          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: D7FQH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH4_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 4.200e-91
Identity = 143/230 (62.17%), Postives = 175/230 (76.09%), Query Frame = 1
Query:  145 PGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASLVSSGSEFSCALAVDG-SVKCWGRNSAGQLGLGDNETRGG-QDDSFEMGDNLPVLDLG--TGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAI 822
            P   A SAG+SHSC VL    +KC+G+N  GQLGQ DSL RG +A+DMGD+LP VPLG FEA+ V SG+EF+CA++VDG SVKCWG+N  GQLGLGD E RGG  DD FEMG+NLP +D    +G++V+S++L GS ACAVL  G+++CWG NE GQLGLG T  RG+   +MGD+LPFVDLG   +VSSVA+GA+H CA + DG VKCWGNNDGGQLGYED   RG  +
Sbjct:   23 PPATAVSAGSSHSCAVLSDATVKCFGDNTLGQLGQLDSLSRGLEATDMGDNLPTVPLGTFEAAAVYSGNEFNCAVSVDGGSVKCWGQNEGGQLGLGDTEARGGPNDDIFEMGENLPTVDFSGNSGLSVESMSLGGSAACAVLTGGSVRCWGANEVGQLGLGDTENRGDEPDEMGDDLPFVDLGTGSVVSSVAVGAKHACATMEDGTVKCWGNNDGGQLGYEDRLPRGTGV 252          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: A0A6H5JFU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU1_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 4.390e-86
Identity = 140/230 (60.87%), Postives = 175/230 (76.09%), Query Frame = 1
Query:  145 PGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASLVSSGSEFSCALAVDG-SVKCWGRNSAGQLGLGDNETRGG-QDDSFEMGDNLPVLDLG--TGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAI 822
            P   A SAG+SHSC VL    +KC+G+N  GQLGQ DSL RG +A+DMGD+LP VPLG F+A+ V SG+EF+CA++VDG SVKCWG+N  GQLGLGD E RGG  D+ FEMG+NLP +D    +G++V+S++L GS ACA+L  G+++CWG NE GQLGLG T  RG+   +MGD+LPFVDLG   +VSSVA+GA+H CA + DG VKCWGNNDGGQLGYED   RG  +
Sbjct:   21 PPVTAVSAGSSHSCAVLSDATVKCFGDNLLGQLGQLDSLSRGLNATDMGDNLPTVPLGTFQAAAVYSGNEFNCAVSVDGDSVKCWGQNDGGQLGLGDTEARGGLNDEVFEMGENLPTVDFSGNSGLSVESMSLGGSAACALLTGGSVRCWGANEAGQLGLGDTENRGDEPDEMGDDLPFVDLGTGAVVSSVAVGAKHACATMEDGVVKCWGNNDGGQLGYEDRLPRGTGV 250          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: A0A017SY21_9DELT (Uncharacterized protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SY21_9DELT)

HSP 1 Score: 235 bits (599), Expect = 5.130e-69
Identity = 124/239 (51.88%), Postives = 156/239 (65.27%), Query Frame = 1
Query:  124 VLALGCTPGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFE-ASLVSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEG-GQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAIGQMG 834
             +ALG      A SA   H+CV+L GG +KCWG N +GQLG      RG   SDMG++LP V LG  + A+LVS+GS+++CA+  DGSVKCWG N  GQLGLGD   RG    S  MGDNLPV++LGTG     ++  G H CAVL D  +KCWG N   GQLGLG T +RG +  QMG+NLP V+LG  V  + V   A HTCA++G G++KCWG ++ GQLG  DT+ARG +   MG
Sbjct:  437 AVALGTGQSAIAVSAAGGHTCVLLNGGSVKCWGYNTYGQLGLGSPASRGTSPSDMGNNLPAVNLGTGKTATLVSAGSQYTCAVLNDGSVKCWGNNDYGQLGLGDTFNRG--TGSTSMGDNLPVVNLGTGKTATLVSAGGRHTCAVLNDSTIKCWGYNSSVGQLGLGDTASRGTSAAQMGNNLPAVNLGTSVSATLVDTSADHTCALLGAGNLKCWGASNDGQLGLGDTSARGSSPAHMG 673          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO)

HSP 1 Score: 230 bits (586), Expect = 1.020e-67
Identity = 123/237 (51.90%), Postives = 151/237 (63.71%), Query Frame = 1
Query:  127 LALGCTPGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASL-VSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAIGQMG 834
            L  G T  G AA  G +H+C +L GG +KCWG N  GQLG  D+  RGD   +MGD+LP V LG    +L +  G   +CAL  DGSVKCWG N+ G+LGLGD   RG  D   EMGD L  +DLG G    ++++ GSHACA+L DG++KCWG N  GQLGLG    RG+  G+MGD LP VDLG      +V  G  HTCA++ DG +KCWG ND G+LG  DTA RG A G+MG
Sbjct:  247 LGTGVTVVGLAA--GDNHTCALLGGGSVKCWGANTSGQLGLGDTAPRGDGPGEMGDALPTVNLGTGRTALAIGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPRG--DGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRGDGAGEMGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLKCWGGNDSGELGLGDTAHRGDAAGEMG 479          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 226 bits (577), Expect = 1.030e-67
Identity = 116/229 (50.66%), Postives = 152/229 (66.38%), Query Frame = 1
Query:  151 GRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFE-ASLVSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAIGQMG 834
            G A S G  H+CV+L  G IKCWG N  GQLG  D+  RGDD  +MG+ LP V LG    A+ +S+G   +CAL  +GS+KCWG N+AGQLGLGD  +RG  D   EMGD LP + LGTG    +I++ G H CA+L +G++KCWG N  GQLGLG T  RG+  G+MGD LP + LG     +++++G  HTCA++ +G +KCWG N  GQLG  DT++RG   G+MG
Sbjct:   44 GSAISVGQLHTCVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRG--DGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMG 270          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: UPI001056704E (hypothetical protein n=1 Tax=Legionella yabuuchiae TaxID=376727 RepID=UPI001056704E)

HSP 1 Score: 227 bits (579), Expect = 3.110e-67
Identity = 112/220 (50.91%), Postives = 146/220 (66.36%), Query Frame = 1
Query:  178 HSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFE-ASLVSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAIGQMG 834
            +SC +L    +KCWG N +GQLG  D++ RGD+  +MGD+LP V LG    A  +++G  F+C L  + +VKCWGRN++GQLGLGD   RG  D + EMGDNLP ++LGTG     +    +HACA+L D +LKCWG N+ GQLGLG T+ RG+  G+MGDNLP V+LG       + LG RHTCA++ +  VKCWG N  GQLG  DT  RG   G+MG
Sbjct:  300 YSCAILDNDSVKCWGNNSFGQLGLGDTISRGDEPGEMGDNLPAVDLGTGRTAKQLTAGGGFNCTLLDNDTVKCWGRNTSGQLGLGDTTNRG--DGAGEMGDNLPAVNLGTGKTAIKLRAGDAHACAILNDNSLKCWGLNDSGQLGLGDTINRGDGPGEMGDNLPTVNLGTGRTAKDIYLGDRHTCALLDNDTVKCWGRNTSGQLGLGDTTNRGDGAGEMG 517          
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Match: A0A6N7Q187_9DELT (DUF4215 domain-containing protein n=2 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7Q187_9DELT)

HSP 1 Score: 231 bits (590), Expect = 6.850e-67
Identity = 122/237 (51.48%), Postives = 146/237 (61.60%), Query Frame = 1
Query:  127 LALGCTPGGRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSLPYVPLGEFEASL-VSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGGQDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGGQLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAIGQMG 834
            +ALG     +  ++G S  C VL  G +KCWG N WGQLGQ D + RGD+  +MGD LP   LG   A L +S     SC L  DG VKCWG N +G LGLGD   RG  D   EMGDNLP +DLG+G     IA  G+ +CA+L DG++KCWGEN  GQLGLG  L RG A G+MGD LP +DLG       +A+G R  C ++ D  VKCWG ND GQLG EDT  RG   G+MG
Sbjct:  565 VALGTGRFAKQLASGHSFQCAVLDDGAVKCWGYNIWGQLGQGDMMQRGDEVGEMGDVLPSATLGAAGAVLSISVTFGHSCVLLTDGKVKCWGLNGSGALGLGDTAHRG--DGPGEMGDNLPFVDLGSGKTATRIATGGASSCAILNDGSVKCWGENARGQLGLGDKLNRGIAPGEMGDALPAIDLGAGRKARRIAVGGRFACVILDDATVKCWGQNDSGQLGLEDTFDRGDDPGEMG 799          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19180.6126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP43_ECTSI4.490e-16694.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KP75_9PHAE4.780e-12178.66Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5KT35_9PHAE9.590e-10089.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQH4_ECTSI4.200e-9162.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFU1_9PHAE4.390e-8660.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A017SY21_9DELT5.130e-6951.88Uncharacterized protein n=2 Tax=Chondromyces apicu... [more]
A0A0K1EHP4_CHOCO1.020e-6751.90Uncharacterized protein n=2 Tax=Chondromyces croca... [more]
A0A835T669_9CHLO1.030e-6750.66Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
UPI001056704E3.110e-6750.91hypothetical protein n=1 Tax=Legionella yabuuchiae... [more]
A0A6N7Q187_9DELT6.850e-6751.48DUF4215 domain-containing protein n=2 Tax=Polyangi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19180contigEcto-sp13_S_contig19180:1913..3347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score481.1
Seed ortholog evalue3.5e-133
Seed eggNOG ortholog2880.D7FP43
Preferred nameRCCD1
Model size834
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
Exons3
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Ec32 orthologEc-10_002410.1
Cds size834
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462976.8357105-CDS-Ecto-sp13_S_contig19180:1912..21251681462976.8357105-CDS-Ecto-sp13_S_contig19180:1912..2125Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19180 1913..2125 +
1681462976.8550828-CDS-Ecto-sp13_S_contig19180:2340..28901681462976.8550828-CDS-Ecto-sp13_S_contig19180:2340..2890Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19180 2341..2890 +
1681462976.8715854-CDS-Ecto-sp13_S_contig19180:3276..33471681462976.8715854-CDS-Ecto-sp13_S_contig19180:3276..3347Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19180 3277..3347 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19180.6126.1prot_Ecto-sp13_S_contig19180.6126.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19180 1913..3347 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19180.6126.1

>prot_Ecto-sp13_S_contig19180.6126.1 ID=prot_Ecto-sp13_S_contig19180.6126.1|Name=mRNA_Ecto-sp13_S_contig19180.6126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=278bp
AAETTAALFQEERATREEARCSTCRKKLWKRLRRMSRFVWLVLALGCTPG
GRAASAGASHSCVVLVGGKIKCWGENFWGQLGQNDSLVRGDDASDMGDSL
PYVPLGEFEASLVSSGSEFSCALAVDGSVKCWGRNSAGQLGLGDNETRGG
QDDSFEMGDNLPVLDLGTGVAVKSIALAGSHACAVLVDGNLKCWGENEGG
QLGLGHTLARGNATGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGD
VKCWGNNDGGQLGYEDTAARGIAIGQMG
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mRNA from alignment at Ecto-sp13_S_contig19180:1913..3347+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19180.6126.1 ID=mRNA_Ecto-sp13_S_contig19180.6126.1|Name=mRNA_Ecto-sp13_S_contig19180.6126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1435bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19180:1913..3347+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCGGCAGAAACGACAGCCGCACTTTTTCAAGAGGAGCGAGCCACGAGAGA AGAAGCGAGGTGTTCGACTTGCCGGAAGAAACTGTGGAAGCGTCTGAGAA GGATGTCGCGTTTTGTGTGGTTGGTGTTAGCTTTGGGCTGTACCCCGGGG GGAAGGGCGGCGTCGGCCGGGGCTTCACACAGCTGCGTCGTTCTGGTGGG CGGCAAAATCAAGGTATTTTCCTTGATTCGATTGTGCGTGGCTCTTCTTT GCGCGTGAAACCCAGAGCTTGTTCGTACGTGCGTATGGTCATTGTTTGTT TGTTGCATTGCCAGACATACATATGAGTTGATTCGTTTTCATCCACCAGC ATTCCGCCTTCCGCCTTGTCTCCTGAACTCCATCCTTTCTTGCGATATCC GTCGGCATTGTCTTTCTTTGTTGTAAAGTGCTGGGGTGAGAATTTCTGGG GGCAGTTAGGTCAGAACGATAGCCTCGTCCGTGGAGATGACGCGTCCGAC ATGGGCGACAGTCTCCCGTACGTTCCCTTGGGGGAGTTCGAGGCCAGCTT GGTCTCCTCTGGGAGCGAGTTCAGCTGCGCCCTCGCCGTCGACGGGTCCG TCAAGTGCTGGGGGCGCAACAGCGCCGGCCAGCTAGGCTTGGGCGACAAT GAGACGAGGGGTGGGCAGGACGACTCGTTCGAGATGGGGGACAACCTACC CGTGCTTGATCTGGGCACCGGCGTCGCCGTGAAAAGCATCGCCCTCGCGG GCTCGCACGCATGCGCTGTGCTCGTCGACGGGAACTTGAAGTGCTGGGGG GAGAACGAGGGAGGACAGCTAGGTCTGGGACACACGTTAGCGAGAGGGAA CGCCACGGGCCAGATGGGGGACAACCTCCCGTTTGTGGACTTGGGGGACG AAGTACTTGTCTCATCGGTTGCTCTAGGGGCGAGACACACGTGCGCGGTA GTCGGGGACGGCGACGTGAAATGCTGGGGTGAGGAAAGTCTTTCGCTTGC AGCAGCGAAGAAGGAAGGTGGAACATAACAAAGTGCTGTTCCCGTGTGAT CCTTGCTTGTGTGCGACCCTGGCTGGAGTACGGAAACATCGTATATTTTA CATCGAAAGGAGTAAAAACGGGCACAAGATTGTACACACAATGGCACGTT TGTTTTTGGTTTTTGCCAGCATCCGCTTACTGCTCCCTCCCCGGTGATAT TTGACTGTTGTTGCGGTCGGTCGCAGGTTCGAAGAAATACACTTGATGGC ATCGTTGATACTTTTTTGTAATGAAGATGTTCGCACTGTGCATGTTTTGC GTGGACAACACTCGTGCCTGGTAAGCAATTCGATGTCTCTCTGTGCCGAA TTTTCGCACGCCAGGTAATAACGATGGTGGCCAGCTGGGTTACGAGGATA CAGCTGCGAGGGGCATCGCTATCGGTCAGATGGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19180:1913..3347+

>mRNA_Ecto-sp13_S_contig19180.6126.1 ID=mRNA_Ecto-sp13_S_contig19180.6126.1|Name=mRNA_Ecto-sp13_S_contig19180.6126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=834bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19180:1913..3347+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCGGCAGAAACGACAGCCGCACTTTTTCAAGAGGAGCGAGCCACGAGAGA
AGAAGCGAGGTGTTCGACTTGCCGGAAGAAACTGTGGAAGCGTCTGAGAA
GGATGTCGCGTTTTGTGTGGTTGGTGTTAGCTTTGGGCTGTACCCCGGGG
GGAAGGGCGGCGTCGGCCGGGGCTTCACACAGCTGCGTCGTTCTGGTGGG
CGGCAAAATCAAGTGCTGGGGTGAGAATTTCTGGGGGCAGTTAGGTCAGA
ACGATAGCCTCGTCCGTGGAGATGACGCGTCCGACATGGGCGACAGTCTC
CCGTACGTTCCCTTGGGGGAGTTCGAGGCCAGCTTGGTCTCCTCTGGGAG
CGAGTTCAGCTGCGCCCTCGCCGTCGACGGGTCCGTCAAGTGCTGGGGGC
GCAACAGCGCCGGCCAGCTAGGCTTGGGCGACAATGAGACGAGGGGTGGG
CAGGACGACTCGTTCGAGATGGGGGACAACCTACCCGTGCTTGATCTGGG
CACCGGCGTCGCCGTGAAAAGCATCGCCCTCGCGGGCTCGCACGCATGCG
CTGTGCTCGTCGACGGGAACTTGAAGTGCTGGGGGGAGAACGAGGGAGGA
CAGCTAGGTCTGGGACACACGTTAGCGAGAGGGAACGCCACGGGCCAGAT
GGGGGACAACCTCCCGTTTGTGGACTTGGGGGACGAAGTACTTGTCTCAT
CGGTTGCTCTAGGGGCGAGACACACGTGCGCGGTAGTCGGGGACGGCGAC
GTGAAATGCTGGGGTAATAACGATGGTGGCCAGCTGGGTTACGAGGATAC
AGCTGCGAGGGGCATCGCTATCGGTCAGATGGGG
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