mRNA_Ecto-sp13_S_contig19165.6117.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: D7FLK1_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK1_ECTSI) HSP 1 Score: 212 bits (539), Expect = 1.330e-62 Identity = 122/157 (77.71%), Postives = 122/157 (77.71%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*G--------------------------------STASPAAAPAAVTRELKFAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV G STASPAAAPAA T ELKFAAIVDPPRSGVHAKCLRSIRGTKAIKRLV
Sbjct: 464 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFVCGKAEAVVAGQIANAFKQHKASLGAPAAGAGEEGSTASPAAAPAA-TGELKFAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 619
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A6P7VUZ0_IXOSC (tRNA (uracil(54)-C(5))-methyltransferase n=9 Tax=Ixodes TaxID=6944 RepID=A0A6P7VUZ0_IXOSC) HSP 1 Score: 99.8 bits (247), Expect = 6.120e-22 Identity = 59/126 (46.83%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTRELK-FAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VNT AE L +V + LG +LDVCCG GTIG+C AA +VYG ++C A+E+A+RNA ANGI N FV G R+ + A+VDPPR G+H K LR++R T +IKRLV
Sbjct: 379 VNTPAAEVLLEVAEDLAALGPRTTLLDVCCGTGTIGLCMAAK--VARVYGVEVCKRAVENAKRNAEANGIRNASFVLGRAEDTMHDVMHTLRDSEDMVAVVDPPRQGLHNKVLRALRATASIKRLV 502
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A1Z5LBB7_ORNMO (tRNA (uracil(54)-C(5))-methyltransferase (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LBB7_ORNMO) HSP 1 Score: 95.5 bits (236), Expect = 7.560e-22 Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTRELK-FAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VNT AE +Y + + +L D V+LD+CCG GTIGI A K+VYG ++C A+E+A++NA ANGI N FV G RE K AIVDPPR G+H K ++++R ++ +K++V
Sbjct: 38 VNTAAAEIVYDLAGKMADLNTDTVLLDICCGTGTIGITLARK--VKKVYGIEVCKRAVENAKKNAEANGIKNVSFVPGKAEDVIYDVLNTLRESKDVVAIVDPPRQGLHTKVVKTLRASEQVKKIV 161
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A293MVL3_ORNER (tRNA (uracil(54)-C(5))-methyltransferase (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MVL3_ORNER) HSP 1 Score: 97.1 bits (240), Expect = 5.720e-21 Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTRELK-FAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
+NT AE LY + +L D +LDVCCG GTIG+ A+ KQVYG + C A++DA+RNA ANGI N FV G R+ K AIVDPPR G+H + L+++R + IK++V
Sbjct: 414 INTSAAEILYGIAGTLADLSPDTTLLDVCCGTGTIGLTLASK--VKQVYGIEACKQAVQDAKRNAEANGITNAHFVMGKAEDVIYDVIGTVRDSKELVAIVDPPRQGLHNRVLKTLRAAEQIKKIV 537
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A1B3PDJ6_9DIPT (tRNA (uracil(54)-C(5))-methyltransferase (Fragment) n=1 Tax=Polypedilum nubifer TaxID=54969 RepID=A0A1B3PDJ6_9DIPT) HSP 1 Score: 96.7 bits (239), Expect = 6.410e-21 Identity = 58/127 (45.67%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 4 NTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTR---ELKFAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
NTKGAE LY+ +I+ L +VLDVCCG GTIG+C A K+V+G +I AIEDA++NA ANGI+N F G+ A R + + AIVDPPR+G+ K + +R + IKRLV
Sbjct: 305 NTKGAEKLYQEIIDLARLTPKTIVLDVCCGTGTIGLCTAKY--CKEVHGMEIIPQAIEDAKKNAEANGIENAHFSAGNADDLIYAMVKQVRLEEDEEIVAIVDPPRAGLSTKSIMQLRNSTKIKRLV 429
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A1Z5L3L6_ORNMO (tRNA (uracil(54)-C(5))-methyltransferase (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L3L6_ORNMO) HSP 1 Score: 95.5 bits (236), Expect = 9.160e-21 Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTRELK-FAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VNT AE +Y + + +L D V+LD+CCG GTIGI A K+VYG ++C A+E+A++NA ANGI N FV G RE K AIVDPPR G+H K ++++R ++ +K++V
Sbjct: 205 VNTAAAEIVYDLAGKMADLNTDTVLLDICCGTGTIGITLARK--VKKVYGIEVCKRAVENAKKNAEANGIKNVSFVPGKAEDVIYDVLNTLRESKDVVAIVDPPRQGLHTKVVKTLRASEQVKKIV 328
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: UPI0014787249 (tRNA (uracil-5-)-methyltransferase homolog A-like n=2 Tax=Osmia TaxID=124287 RepID=UPI0014787249) HSP 1 Score: 95.9 bits (237), Expect = 1.420e-20 Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTRELKFAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VNTKGAE LYK I+ + +D +LD+CCG GTIG+ A + ++V+G ++ AI+DA+ NA+AN I NCEF G + T + A+VDPPR+G+H K L ++R K + RL+
Sbjct: 381 VNTKGAEVLYKAAIDLAKPTNDTALLDICCGTGTIGL--AFSKHCREVFGLEMIEDAIKDAKENAVANEIKNCEFFVGKAEDILSPIIQRTTKPDIIAVVDPPRAGLHQKALLTLRRAKKLSRLI 503
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A7S1G959_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G959_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.790e-20 Identity = 61/130 (46.92%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPA-----AAPAAVTRELKFAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VN+ AE LY V E G A +LDVCCG GTIG+ A A A +V G D+ P IEDA+RNA ANG+ N F+ S A A AA AA E +F +VDPPR G+H R++R K ++RLV
Sbjct: 73 VNSGAAELLYSKVREWAAPGPKAALLDVCCGTGTIGLTMATA--AARVVGVDMSAPGIEDAKRNAAANGVTNATFL-CSKAEDAMKQLVAAGAAGDGEAEFVGVVDPPRGGLHPNVTRALRTCKGLERLV 199
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A1Z5KVP5_ORNMO (tRNA (uracil(54)-C(5))-methyltransferase (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KVP5_ORNMO) HSP 1 Score: 95.1 bits (235), Expect = 2.700e-20 Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTRELK-FAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VNT AE +Y + + +L D V+LD+CCG GTIGI A K+VYG ++C A+E+A++NA ANGI N FV G RE K AIVDPPR G+H K ++++R ++ +K++V
Sbjct: 398 VNTAAAEIVYDLAGKMADLDTDTVLLDICCGTGTIGITLARK--VKKVYGIEVCKRAVENAKKNAEANGIKNVSFVLGKAEDVIYDVLNTLRESKDVVAIVDPPRQGLHTKVVKTLRASEQVKKIV 521
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Match: A0A2R5LMZ4_9ACAR (tRNA (uracil(54)-C(5))-methyltransferase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LMZ4_9ACAR) HSP 1 Score: 94.4 bits (233), Expect = 4.220e-20 Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 1 VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGSDICLPAIEDARRNALANGIDNCEFV*GSTASPAAAPAAVTRELK-FAAIVDPPRSGVHAKCLRSIRGTKAIKRLV 375
VNT AE LY + L D +LDVCCG GTIG+ +A K+VYG + C A+++AR+NA ANGI N FV G + R+ K A+VDPPR G+H+K L+++R T+ I+++V
Sbjct: 303 VNTAAAEILYDQTGKMANLNQDTTLLDVCCGTGTIGLTLSAK--VKKVYGIETCKRAVDNARKNAEANGIKNASFVLGKAEDVIYDVLNMLRDSKELVAVVDPPRQGLHSKVLKTLRATQQIRKIV 426 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19165.6117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19165.6117.1 >prot_Ecto-sp13_S_contig19165.6117.1 ID=prot_Ecto-sp13_S_contig19165.6117.1|Name=mRNA_Ecto-sp13_S_contig19165.6117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp VNTKGAEALYKVVIENLELGDDAVVLDVCCGAGTIGICAAAAGGAKQVYGback to top mRNA from alignment at Ecto-sp13_S_contig19165:476..2503- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19165.6117.1 ID=mRNA_Ecto-sp13_S_contig19165.6117.1|Name=mRNA_Ecto-sp13_S_contig19165.6117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2028bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19165:476..2503- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19165:476..2503- >mRNA_Ecto-sp13_S_contig19165.6117.1 ID=mRNA_Ecto-sp13_S_contig19165.6117.1|Name=mRNA_Ecto-sp13_S_contig19165.6117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=231bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19165:476..2503- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |