mRNA_Ecto-sp13_S_contig1915.6112.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: D7FW67_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW67_ECTSI) HSP 1 Score: 591 bits (1523), Expect = 5.320e-212 Identity = 304/325 (93.54%), Postives = 311/325 (95.69%), Query Frame = 1
Query: 4 SGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIKSYKVKRQAMQETMGRSLFEGSKAPPGPKRVCDIEDNEARAPTLANSIWAEAVSSGAAGQVAATGAGVAIETDAGEKIRSAVTFDVQRCRGLWVYVLIALAAWGGMHVAARVGLTSTYA 978
GVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLS+LPSTPVPDMSPEEICAEGERKK VGNGHFERT+YKKALRAYTAAANAVAELEFP GDSDTFREARRLRIDCGNNIAMTCY+LGELEKAKEAAVGVLEEDP+NVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRL ARIKSYK KRQAMQETMGRSLFEGSKAPPGPKRVC+IE +EA APTLANSIWAEAVS AAGQVA GAGVAIETDAGEK+RSAV FDVQRCRGL VYVLIALAAWGGMHVAARVGLTS YA
Sbjct: 22 EGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSILPSTPVPDMSPEEICAEGERKKLVGNGHFERTAYKKALRAYTAAANAVAELEFPTGDSDTFREARRLRIDCGNNIAMTCYRLGELEKAKEAAVGVLEEDPTNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLAARIKSYKAKRQAMQETMGRSLFEGSKAPPGPKRVCEIEGDEAPAPTLANSIWAEAVSCDAAGQVAGKGAGVAIETDAGEKMRSAVPFDVQRCRGLRVYVLIALAAWGGMHVAARVGLTSIYA 346
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: A0A6H5JHX5_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX5_9PHAE) HSP 1 Score: 568 bits (1464), Expect = 3.090e-202 Identity = 297/326 (91.10%), Postives = 305/326 (93.56%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIKSYKVKRQAMQETMGRSLFEGSKAPPGPKRVCDIEDNEARAPTLANSIWAEAVSSGAAGQVAATGAGVAIETDAGEKIRSAVTFDVQRCRGLWVYVLIALAAWGGMHVAARVGLTSTYA 978
+ GVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLEL+S+LPSTPVPDMSPEEICAEGERKK VGNGHFERT+YKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCY+LGELEKAKEAAVGVLEEDP+NVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAEL RL ARIKSYK KRQAM ETMGRSLFEGSKAP G KRVCDIE EA PTLA SI AEAVSS AAGQVAA GAGVAIETDAGEK RSAV DVQRCRGLWVY+LIALA+WGGMHVAA VGLTS YA
Sbjct: 71 IPGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELVSILPSTPVPDMSPEEICAEGERKKLVGNGHFERTAYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYRLGELEKAKEAAVGVLEEDPTNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELCRLAARIKSYKAKRQAMHETMGRSLFEGSKAPLGLKRVCDIEGKEAP-PTLAKSIRAEAVSSDAAGQVAAKGAGVAIETDAGEKTRSAVPVDVQRCRGLWVYILIALASWGGMHVAALVGLTSMYA 395
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: A0A835YRT2_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT2_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.000e-38 Identity = 95/240 (39.58%), Postives = 132/240 (55.00%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAAN-AVAELEFPNGDSDTFRE--------------ARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIKSYKVKRQAMQETMGRSL 675
+ G+EL LRHM+ G+ LV+C ARFA+G A PP++D+ + L L+ + + +MS ++ KK VGN H+ Y KALR Y AA + A + ++ G++ + E AR L I C NN+AM QLG L+ A +A V LE DP+NVKAL+RAGQVSS Q NF EAR AL+K A++AE L R+ Y +++AMQE MG +L
Sbjct: 68 IPGIELALRHMKPGETRLVKCVARFAWGEEEQSVAHAP----PPNSDVVLELTLVRIATAKTPAEMSADQRLEHATFKKEVGNAHYAAKHYPKALRCYQAAMDTAQSAIQQQQGEAGSGSEEGSDADANAARNSAARALLIACANNVAMVHVQLGNLKGALDATVIALEMDPNNVKALYRAGQVSSRQGNFEEARAALKKXXXXXXXXAAVRAETRELQQRVADYHARQRAMQEKMGAAL 303
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: A0A7S2REJ1_9STRA (Peptidylprolyl isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REJ1_9STRA) HSP 1 Score: 148 bits (374), Expect = 6.880e-38 Identity = 86/228 (37.72%), Postives = 131/228 (57.46%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAV--AELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIKSYKVKRQAMQETMGRSLF 678
+ GVEL LR++ G + V C RFA+G G PA G+ + + D++ + + +V P+TPV M+ +E E + K+ GN F + +A R Y AA A+ AE E + DT L +DCGNN+A+ +L + +KA++A + VL DP+NVKAL+RAG + L + EAR+AL++A EL+P +KA+ EL L A+ Y+ K + + MG LF
Sbjct: 76 VPGVELALRYLGPGDRARVCCAHRFAFGLSGRPAKHEGERAIAAEQDVDFIVAVSTVDPNTPVAGMALDERLREADCKRQSGNIFFLYEDWARATRCYAAALKALEGAENEEDAAEPDTAGHIHSLLVDCGNNLALAHLRLDDPKKAEDACIAVLSLDPANVKALYRAGVATKLMGRYDEARLALDRALELDPSNKAVVKELRNLQAKRLEYRQKDARIAQAMGAKLF 303
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: A0A7S1TZ54_9STRA (Peptidylprolyl isomerase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ54_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.380e-28 Identity = 80/228 (35.09%), Postives = 124/228 (54.39%), Query Frame = 1
Query: 10 VELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAVAELEFPNGDSDTFRE-----ARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIKSYKVKRQAMQETMGRSLF 678
+EL LRHMRVG++ +RFA+G G PA + GD DLP D D+ + +EL + T ++ + G RK++ GN ++ ++A RA+ AA E + + RE A +L +DCG+N+A L A++AAVGVLE DPS+VKAL+RAG + +F A +A++ A +P + A++ L AR Y K++AM + +GR +
Sbjct: 83 LELALRHMRVGEELEAYGISRFAWGPDGLPAIREGDADLPGDADVLLTVELHEIKAETA--SVAEARLFEAGWRKRN-GNDYYRHRDLRRAARAFAAALKLFTEPLPDDAIPEELRERYGAEATQLLVDCGSNLAAVQVALKNWPAARDAAVGVLEVDPSHVKALYRAGTAAMHLHDFAGATLAVKTALAADPDNAAVRRLARDLKARKAEYAEKKKAMGKRLGRDML 307
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: A0A8B7ZNY5_ACAPL (Peptidylprolyl isomerase n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZNY5_ACAPL) HSP 1 Score: 115 bits (287), Expect = 2.280e-25 Identity = 69/208 (33.17%), Postives = 112/208 (53.85%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAV--AELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVAR 618
+S +L L M +G+ +++ RFAYG G D+PP+ ++ LELL+V P+ + +M+ EE+C+ G++K+ GN F R Y A+ +Y+ A + A++ NG E LR+ C NN+A ++ E A ++ LE +P NVKALFR G+V + Q ++ +A +++A P +K I EL RL R
Sbjct: 159 VSAWDLCLSLMDLGEVSIIKTSPRFAYGETGRAP------DVPPNAEVTYELELLNVQPAPDLEEMTVEEVCSTGDKKRERGNELFSRKDYSGAINSYSKALKLLEKAKVSDDNGSKQAVME---LRVKCYNNLAAAQLKIDAYEAALKSCNNALEAEPENVKALFRKGKVLASQGDYEQAVKTMKEALSREPSNKVIHHELSRLTNR 357
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: A0A6J2PMG2_COTGO (Peptidylprolyl isomerase n=3 Tax=Perciformes TaxID=8111 RepID=A0A6J2PMG2_COTGO) HSP 1 Score: 114 bits (286), Expect = 2.880e-25 Identity = 65/221 (29.41%), Postives = 116/221 (52.49%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIKSYKVKRQAMQETM 663
+ ++L ++ M +G++ L++ +A++ YG G + + ++PP+ ++ +ELL + + + P E A K+ GN H++R Y A+ +Y+ A + + E +R+ C NN+A + +L + A ++ V LE+ P N+KALFR G+V +LQ + EA L KA +L P +K I AEL +LV + + QAM + M
Sbjct: 142 IQALDLTVQLMEMGEKALIQADAKYTYGARG-----SVEPEVPPNAELSFEVELLEATDAPDLELLPPPEKIALASNKRERGNVHYQRGDYAFAVNSYSIALQITESSSKVDISPEEENELMDVRVKCLNNMAASQLKLDHYDAALKSCVSALEQQPDNIKALFRMGKVLALQGEYTEAIQCLRKALKLEPSNKTIHAELSKLVKKNSEQRGAEQAMYKKM 357
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: A0A0P1ABF1_PLAHL (Peptidylprolyl isomerase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABF1_PLAHL) HSP 1 Score: 109 bits (273), Expect = 7.570e-24 Identity = 70/226 (30.97%), Postives = 123/226 (54.42%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGC-PATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIKSYKVKRQAMQETMGRSL 675
+ +EL + M VG++C VRC+ARFAYG +G P GD +I++ +EL V +MS +E+ E +KK GN +F+ +Y +A + Y A + E D+ + + L I GNN+A ++L + ++A+++++ VL+ D N+KA++R Q++ QS F EA + L KA E+ P + ++ +L+ ++K K +QA + + L
Sbjct: 72 MPALELVAKMMHVGEECEVRCDARFAYGDVGLEPYVAPGD-------EIKLLVELCRV-GKRMTSEMSSQELIIEATQKKESGNRYFKEKNYDQAAKLYKRALKLLEMWEHTEEDT---AQCKELLIALGNNVANVQHKLLQFKEARQSSLEVLQLDGKNIKAMYRISQIALDQSEFEEANMFLRKALEIEPENSKVR----QLLVKLKKKKRDQQARERKLYAKL 282
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: UPI001ABEC8D6 (peptidyl-prolyl cis-trans isomerase FKBP8-like n=1 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABEC8D6) HSP 1 Score: 110 bits (274), Expect = 1.840e-23 Identity = 68/208 (32.69%), Postives = 106/208 (50.96%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVARIK 624
+ +ELG+R M++G+ + +A+G LG D D+P D + ++ LL V + ++ + +K+ GN HFER Y+ A+ +Y+ A + S+ E R RI C NN+A T +L + + VLE D N KAL+R G+V S + N+ EA L++A +L P +KAI AEL +LV R K
Sbjct: 177 IQALELGVRSMQLGEVAFLLTNGLYAFGLLG------RDPDIPTDASLLYKVTLLEVRDKPSLIALTTADRITLANQKRECGNFHFEREEYRSAMHSYSQALTILTPNTADPLSSEEEEEIREHRIKCLNNLAATQLKLHHYDDVMNSCNAVLEMDTDNAKALYRKGKVLSERGNYEEAMSVLKQALKLEPTTKAIHAELSKLVRRQK 378
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Match: UPI0018D94BED (peptidyl-prolyl cis-trans isomerase FKBP8-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D94BED) HSP 1 Score: 108 bits (270), Expect = 5.400e-23 Identity = 70/223 (31.39%), Postives = 116/223 (52.02%), Query Frame = 1
Query: 1 LSGVELGLRHMRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSTPVPDMSPEEICAEGERKKSVGNGHFERTSYKKALRAYTAAANAVAELEFPNGDSDTFREARRLRIDCGNNIAMTCYQLGELEKAKEAAVGVLEEDPSNVKALFRAGQVSSLQSNFIEARIALEKARELNPRSKAIQAELGRLVAR-IKSYKVKRQAMQETMG 666
+S +L L M +G+ +++ RFAYG LG D+PP+ +I LELL+V P+ +M+ +E+C G++K+ GN + R Y A+ +YT A + + + DS L++ C NN+A ++ + A ++ L+ +P NVKALFR G+V + Q + +A +++A P +K I EL RL R K + +RQ Q +G
Sbjct: 163 VSAWDLCLSLMDLGEVSIIKTSPRFAYGILGRLP------DVPPNAEITYELELLNVQPAPDPGEMTIDELCLAGDKKRERGNELYSRKDYSGAINSYTKALKLFEKAKVSDDDSAKLA-VMELKVKCYNNLAAAQLKIDAYDPALKSCSNALDIEPENVKALFRKGKVLASQGEYEQAIGTMKEALSREPSNKVIHNELSRLTNRESKERQSERQLYQRMVG 378 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1915.6112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1915.6112.1 >prot_Ecto-sp13_S_contig1915.6112.1 ID=prot_Ecto-sp13_S_contig1915.6112.1|Name=mRNA_Ecto-sp13_S_contig1915.6112.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp MRVGQQCLVRCEARFAYGGLGCPATKAGDTDLPPDTDIEVRLELLSVLPSback to top mRNA from alignment at Ecto-sp13_S_contig1915:11857..12837- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1915.6112.1 ID=mRNA_Ecto-sp13_S_contig1915.6112.1|Name=mRNA_Ecto-sp13_S_contig1915.6112.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1915:11857..12837- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1915:11857..12837- >mRNA_Ecto-sp13_S_contig1915.6112.1 ID=mRNA_Ecto-sp13_S_contig1915.6112.1|Name=mRNA_Ecto-sp13_S_contig1915.6112.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1915:11857..12837- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |