mRNA_Ecto-sp13_S_contig19.6024.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig19.6024.1
Unique NamemRNA_Ecto-sp13_S_contig19.6024.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: A0A6H5KLL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL9_9PHAE)

HSP 1 Score: 701 bits (1808), Expect = 4.960e-250
Identity = 364/404 (90.10%), Postives = 375/404 (92.82%), Query Frame = 2
Query:   59 MWLRTGPVLLGFCSMPTVSFVLPPTPILASVNCR-ATCTADFRVPVVTG--HGGSTGPGAKPLQRRSYTRIAPKSCRCCCNFCRGVSHAFGGASTSRATIGTRLASREGNH-VSANTPSDAIPAFASNDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVGAMKAIIDVFEEEEVSEMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGWNHGPA 1258
            MWLR GPVLLGFCSMPTVSFVLPPTPILA VN R ATCT DFRVPVV G  HGGS GPGAKPLQRR  +RIAPKSCRCC NFCRG+SHAFGGA TSRATIG RLASREGNH V ANTPS+AIPAFASNDGVSYLRNPDT SEIWLVGVVHGQE+SVELSKSVVRTTRPQVVMLELDSSRLDDLPPG+AQKAEDGLTWFMP+KQPDNAVAQGVT    GDDV+L RG +WKGP AFMSSSR KS VGAMKAIIDVFEEEEVSEMEVAVLEAQACGA++LLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRK FAGLDLRKP+TREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGK ITVALVGLFHVDGIERILK NGWNHGPA
Sbjct:    1 MWLRAGPVLLGFCSMPTVSFVLPPTPILARVNRRGATCTTDFRVPVVNGGGHGGSAGPGAKPLQRRC-SRIAPKSCRCCFNFCRGMSHAFGGAPTSRATIGMRLASREGNHHVPANTPSEAIPAFASNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGEAQKAEDGLTWFMPQKQPDNAVAQGVTSRGGGDDVDLPRGEKWKGPFAFMSSSRVKSFVGAMKAIIDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKTFAGLDLRKPDTREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKPITVALVGLFHVDGIERILKRNGWNHGPA 403          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: D7FHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB7_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 5.630e-184
Identity = 273/306 (89.22%), Postives = 285/306 (93.14%), Query Frame = 2
Query:  341 ATIGTRLASREGNHVSANTPSDAIPAFASNDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVGAMKAIIDVFEEEEVSEMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGWNHGPA 1258
            AT G RLAS EG   SAN  S+A+PAF SNDGVSYLRNPDT SEIWLVGVVHGQE+SVELSKSVVRTTRPQVVMLELDS RLDDLPPG+AQKAEDGLTWFMPEKQPD+AVAQ VTLE  GDDVELSRG RWKGP +FMSSSRAKS VGA+KA++DVFEEEEVSEMEVAVLEAQACGA++LLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETRE AGEHYAAMKRLSNQRALEAMVPERDEVMA NLMT+KGK ITVALVGLFHVDGIERILK NGWNHGPA
Sbjct:    2 ATNGMRLASHEGAQFSANARSEAVPAFTSNDGVSYLRNPDTGSEIWLVGVVHGQETSVELSKSVVRTTRPQVVMLELDSKRLDDLPPGEAQKAEDGLTWFMPEKQPDDAVAQYVTLEGGGDDVELSRGDRWKGPFSFMSSSRAKSFVGAIKAMVDVFEEEEVSEMEVAVLEAQACGARVLLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETRETAGEHYAAMKRLSNQRALEAMVPERDEVMASNLMTIKGKPITVALVGLFHVDGIERILKRNGWNHGPA 307          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: D7FHB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHB5_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 5.500e-37
Identity = 127/411 (30.90%), Postives = 183/411 (44.53%), Query Frame = 2
Query:   59 MWLRTGPVLLGFCSMPTVSFVLPPTPILASVNCRATCTADFRVPVVTGHGGSTGPGAKPLQRRSYTRIA----PKSCRCCCNFCRGVSHAFGGASTSRATIGTRL----ASREGNHVSANTPSDAIPAFASNDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVGAMKAIIDVFEEEEVS---EMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGWNHGPA 1258
            M +R+  ++L     P  SFVLP T + +    R  C   +     +     +G  A    R  +  +     P   RC C           GA  SR ++  R     AS E  ++SA+   + +P   SND VSY  +P   S IWLVGVVHG +S V+L +  +   RP+VVM+ELD+ R+  LPPG+A +  +GL W+ PE++P+ +      ++ DG                            A        EEE VS   E++ AV EA ACGA++LLGDRD+E T R L  A  AD                  S   RK+F  L                         + +       EVMA+NLM L+G+  TVA++G+ H+DG+E++LK +GW    A
Sbjct:    2 MGIRSLSLVLPLACSPAESFVLPATRLRSVAPLRLDCDVQY-----SRGAARSGTDAAVKGRERFMSMELGLNPVKHRCSCQPV--------GAHRSR-SLPLRSKQVQASAEETNLSADPTQETLPECISNDAVSYWVHPAKESHIWLVGVVHGAKSGVQLVEEAIGGIRPEVVMVELDADRICVLPPGEAMETRNGLWWWAPEEEPEGSA----DVDEDGXXXXEY----------------------AEDDXXXXDEEESVSPMIEIQTAVREAGACGARVLLGDRDYETTGRLLEKAKRADMA----------------SAKERKEFNDLTT-----------------------SFDC------EVMAKNLMKLRGEQTTVAVIGMAHLDGVEKVLKGHGWQRRRA 327          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: A0A6H5K4M4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4M4_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 9.330e-33
Identity = 142/428 (33.18%), Postives = 195/428 (45.56%), Query Frame = 2
Query:   59 MWLRTGPVLLGFCSMPTVSFVLPPTPI-LASVNCRATCTADFRVPVVTGHGGSTGPGAKP--LQRRSYTRIAPKSCRCCCNFCRGVSHAFGG-ASTSRATIGTRLASREGNHVSANTPSDAIPAFASNDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGDDVELSR----GARWK---GPLAFMSSSRAKSLVGAM-KAIIDVFEEEEVS------EMEVAVLEAQACGAQILLGDRDFEETKRRLVAA------------GLADT-VGDERLDDPEA-LLNDSMSVSNRKKFAGLDLRKPET-REAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGW 1243
            M LRT  + L F S+   SFV+PP  + L+S +         R P       +TG    P  L     T++  ++        R +  A    AS S  T   + A+  G  V     +   P F  +D VSYL NP   SE+WLVG  H   SS  L ++V+R  +PQVVM+ELD+ R+               ++  P KQ +  +A G   E      E +R    GA +K    P   ++         A+ KAI  ++E  +        E  +A+ EA+ACGA++LLGDRD   T RRL  A            G  +T +G E LD      +N S+ +          L+  ET R+  G +      L N     AM+ ERD+VMA NLM L GK +TVA+VGL HVDGIE IL  NGW
Sbjct:    1 MVLRTLSLALPFASLLAESFVVPPPSLSLSSASGSTWHVGSVRNPEEGTTTAATGNPKHPGLLMELENTQLDRRA------LLRTIGGALASLASASALTASPQQAAAAGTAVGRRPGAKRSPTFLCDDAVSYLYNPTKQSEVWLVGTAHISNSSATLVENVIRQIKPQVVMVELDAQRVG--------------SFMKPSKQGEKTLADGTGKEI-APPAERTRNPFFGAFFKQLLDPKVPVNDRITDFFAAALGKAISKMYESMDQKGLSSGQEFTIAINEARACGAKLLLGDRDVRITLRRLSEALRKIDLQKISQSGQMETGLGLEALDGSSVESINSSLDI----------LKNRETMRKVIGFYKEEAPELYN-----AMIGERDKVMAVNLMGLDGKQVTVAVVGLAHVDGIEGILMANGW 392          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: A0A6H5KTH2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH2_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.050e-19
Identity = 79/233 (33.91%), Postives = 119/233 (51.07%), Query Frame = 2
Query:  560 MLELDSSRLDDLPPGKAQKAEDGLTWF--MPEKQPDNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVGAMKAIIDVFEEEEVSEMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRK---PETREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGW 1243
            M+E+D  R+  LPPG+A K  DGL W+  + E  P  AV+ G   + D D+V+ +  +R  G     +++         K  ++  +  E+SE   A  +A ACGA++LLGDRDF+ET RR+  A        +R D  EA+ +   S + +K      +++     T  A       +++    R    +V ERDEVMA NL+ ++    TVA+VG  H  GI  ILK NGW
Sbjct:    1 MVEIDPCRIKMLPPGEATKDGDGLWWWDAVQEAGPATAVSSG---DRDKDEVQAANTSRTPGDGLETATNAVARTRRRAKNDMNT-DGMEMSEFYAAARQAVACGARVLLGDRDFQETTRRVSDA--------DRADQEEAMSSLGDSSAGKKNTVEPRIKRRVLEGTSPALWRKLRDLEKTWKPRKFAVLVTERDEVMASNLLKVEEGQGTVAVVGAHHTIGIGGILKANGW 221          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: L1K338_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K338_GUITC)

HSP 1 Score: 85.5 bits (210), Expect = 1.730e-14
Identity = 82/276 (29.71%), Postives = 126/276 (45.65%), Query Frame = 2
Query:  428 NDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVG-AMKAIIDVFEEEEVSEMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRK----KFAGLDLRKPETREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNG 1240
            N  V+YLR+P    E++LVG VH  + S E+   V+   RPQ VM+EL  +R   +                            V+++       L    R  G    +S  +A ++VG  +   ID +     +EM VA+  A+  GA+++LGDRD + T RRL          +  L D   LL+  MS S++      FA     K  TR+ A      ++   +   + A+V ERDE+MA+ L     + + VA+VG+ H+DGIE+  K  G
Sbjct:   87 NGHVAYLRHPRLQQEVYLVGSVHISKKSAEIVNEVILAVRPQAVMVELCEARKRAI----------------------------VSIDQGQQTSTLDTILRMAG----ISRQQASAMVGDKILEFIDAYT--RGNEMLVAMRAAEQVGAKVILGDRDQQTTLRRLKE--------EFNLSDVLKLLSTPMSPSSQSIFSTPFAKQKSEKEITRDDARRMLQRLRDSCSSGMISALVDERDEIMAQTLARCNFQRV-VAVVGMAHMDGIEKRYKDEG 319          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: W7TUP6_9STRA (Pheromone shutdown, TraB n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUP6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.310e-13
Identity = 90/336 (26.79%), Postives = 137/336 (40.77%), Query Frame = 2
Query:  413 PAFASNDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGDDVE-----------------------LSRGARWK--------GPLAFMSSSRAKSLVGAMKAII-----------DVFEEEEVSEMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETREAAGEHYAAMKRLSNQRAL------------EAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGWNHGPA 1258
            P+   +D +S+LRNP T  +I+++G  H   +S  L +S +R  RPQ VMLELD+SR+  L    +       +  M   +P   V    +  SD  DV                        LS+    K        G L  + S   + LVG    ++           D        E  VA+ E +  GA +LLGD+D + T RRL     +D +    L     + + + S + R+      +R  +          A+K  S+ R L            +AM+ ERD  M  +L+    +TI V +VG+ H+DGIER L   G+   P 
Sbjct:  118 PSGLCDDAISHLRNPKTGQDIYMIGTAHISNASALLVRSTIRELRPQTVMLELDASRIGRLAKNTSNSIPKPSS--MGRSEPSRRVVIVASSSSDSPDVPPATFVIPGPASTALQPPPSDPGFLSKQEEGKAGFLRAALGELTRVGSGFRERLVGLGAMVVGQVISGLYRGLDKMGFVSGQEFIVAIDEGRKVGADLLLGDQDVQVTLRRL-----SDALSRSELGKVREMESPTRSPAARE-LEARGIRMGDNAADISVAMEALKERSSVRTLMASLQQELPEVYKAMIEERDAYMTASLLGCGSQTI-VGVVGIGHLDGIERNLGREGFVRVPC 444          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: A0A1Y1IQP6_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQP6_KLENI)

HSP 1 Score: 78.6 bits (192), Expect = 2.460e-12
Identity = 85/275 (30.91%), Postives = 129/275 (46.91%), Query Frame = 2
Query:  437 VSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAED--GLTWFMPEKQPDNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVGAMKAIIDVFEE---EEVSEMEVAVLEAQACGAQILLGDRDFEETKRRL-VAAGLADTVG--DERLDDPEA--LLNDSMSVSNRKKFAGLDLRKPETREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILK 1231
            + Y+R+  T SE++L+G  H  ++S E  K V+   RPQ V +ELD+ R + L  GK  + +   GL   + E            + + GD  +                   K L  AM+++  +  +   E   E +VA+ EAQ   A+I+L DR  +ET  RL     L D V     R+D  E   +L D   ++ +      +  K  TREA  +  A M++L     +  MV ERDE++   L  L+G    VA+VG+ HVDGIER+ K
Sbjct:   41 IVYMRSVRTGSEVYLIGTAHVSKASAEEVKEVIHLVRPQYVGVELDAERAEKLMSGKMYEDQGSRGLLATLRE-----------LMHAPGDIGQ-------------------KVLTVAMRSMYKMLRDTGLEPGLEFKVAMEEAQKVNAEIVLLDRPAQETMARLREVLSLWDIVKLFTRRIDPNEVPPVLRDMGQITPQNIEETTEQLK--TREAVRQITAFMEKLFPD-VVRVMVHERDEIIFNRLRQLRG--CIVAVVGMAHVDGIERLWK 280          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: A0A7S4LCG8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LCG8_9EUGL)

HSP 1 Score: 79.3 bits (194), Expect = 4.170e-12
Identity = 78/290 (26.90%), Postives = 135/290 (46.55%), Query Frame = 2
Query:  395 TPSDAIPAFASNDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVGAMKAIIDVFEEEEVSEMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGD-----ERLDDPEALLNDSMSVSNRKKFAG-LDLRKPETREAAGEHYAAMKRLSNQRALEAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGWN 1246
            T + A     ++  VS+L  P+   E++L+G  H    S EL K+VVR  RP+ VMLELD+ R+   P G     ++G+              + +   S    V L +          + +     L+ A  + ++    +   E  VA+ EA+A  A I+LGD+  + T +RL  A     +       + +++ E  +  +++  ++ + AG ++L K   R    E  A MK+   +   +A++ ERD  MA +L    G+ I V +VG+ H+DGIE+ L +   N
Sbjct:  137 TAASAASVVCTDQAVSHLVGPN-GREVFLIGTAHISNISAELVKNVVREVRPETVMLELDAGRIKMAPDGSGP--QEGVVGSRASLSLAERARRDLFTGSKPFGVRLQK----------LQADLIGGLLAAFYSALNQMGFDSGQEFIVALQEAKALNANIVLGDQPIDITLQRLQQALAVSDLSKMFSPPDSMNEVEIEVAQALNSGSKAELAGAVELLKQ--RSQVRELVAVMKQQLPE-VYQALLAERDSYMANSLRNSPGQRI-VGVVGIAHMDGIEKKLGYERIN 409          
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Match: A0A7S3Q1T6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1T6_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 8.220e-12
Identity = 98/328 (29.88%), Postives = 139/328 (42.38%), Query Frame = 2
Query:  395 TPSDAIPAFAS---NDGVSYLRNPDTASEIWLVGVVHGQESSVELSKSVVRTTRPQVVMLELDSSRLDDLPP-----GKAQKAEDGLTWFMPEKQPDNAVAQGVTLESDGD-----DVELSRGAR----WKGPLAFMSS--SRAKSLVG-AMKAIIDVFEEEEVS---EMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDERLDDPEALLNDSMSVSNRKKFAGLDLRKPETR-EAAGEHYA----AMKRLSNQRAL------------EAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGWNHGPA 1258
            TPS +    +S   +  VS  RNP     ++++G  H   +S +++  +VR T+P  V +ELD+ R+    P     GK    +  ++    E  P+ A    V+           +VE+   +R       P        + A  LVG ++K +    E E  S   E  VAV E    G+ I+LGD+D E T RRL  A L+ T      D  + L  DS    N K+      +  ET  E + E        +K   N + L             AMV ERDE MA  L  L      VA+VG+ HVDGIER L   GW+   A
Sbjct:  107 TPSKSSSPVSSPLCDPSVSTFRNPSNNRVVYILGTAHISSASADVAGQLVRDTKPSAVFVELDAKRVGRAIPKPSVSGKTS-GDISISDTAGEAAPETATPVLVSAPISSPVVNVVEVEVPPSSRPPPTKSNPFNLKEKLLNNASKLVGNSIKGLYSKLESEGFSAGEEFVVAVREGLKIGSTIVLGDQDVEVTLRRLTEA-LSKT------DLKKLLAADSEMEQNMKQLMPDSGKAIETTGEMSSEQLTYFVETIKARENVKLLMSNLQSVAPEIYNAMVKERDEYMANGLDKLNQYDSIVAVVGIAHVDGIERFLMGRGWDEVKA 426          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19.6024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLL9_9PHAE4.960e-25090.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHB7_ECTSI5.630e-18489.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHB5_ECTSI5.500e-3730.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K4M4_9PHAE9.330e-3333.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KTH2_9PHAE1.050e-1933.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
L1K338_GUITC1.730e-1429.71Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
W7TUP6_9STRA5.310e-1326.79Pheromone shutdown, TraB n=2 Tax=Monodopsidaceae T... [more]
A0A1Y1IQP6_KLENI2.460e-1230.91Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7S4LCG8_9EUGL4.170e-1226.90Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3Q1T6_9STRA8.220e-1229.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19contigEcto-sp13_S_contig19:9716..15551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score140.6
Seed ortholog evalue1.6e-30
Seed eggNOG ortholog2880.D7FHB1
Model size1775
KEGG rclassRC00034,RC00767,RC02141,RC02755
KEGG koko:K03781
KEGG ReactionR00009,R00602,R02670
KEGG Pathwayko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014
KEGG ModuleM00532
Hectar predicted targeting categorychloroplast
Exons9
EggNOG free text desc.TraB family
EggNOG OGsCOG1916@1,KOG2860@2759
EC1.11.1.6
Cds size1203
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19.6024.1prot_Ecto-sp13_S_contig19.6024.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig19 10230..15493 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462969.3865168-UTR-Ecto-sp13_S_contig19:9715..102291681462969.3865168-UTR-Ecto-sp13_S_contig19:9715..10229Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19 9716..10229 -
1681462969.4837954-UTR-Ecto-sp13_S_contig19:15493..155511681462969.4837954-UTR-Ecto-sp13_S_contig19:15493..15551Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig19 15494..15551 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462969.398958-CDS-Ecto-sp13_S_contig19:10229..103551681462969.398958-CDS-Ecto-sp13_S_contig19:10229..10355Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 10230..10355 -
1681462969.4122992-CDS-Ecto-sp13_S_contig19:10757..108561681462969.4122992-CDS-Ecto-sp13_S_contig19:10757..10856Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 10758..10856 -
1681462969.4215267-CDS-Ecto-sp13_S_contig19:11318..114531681462969.4215267-CDS-Ecto-sp13_S_contig19:11318..11453Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 11319..11453 -
1681462969.4335651-CDS-Ecto-sp13_S_contig19:11851..119401681462969.4335651-CDS-Ecto-sp13_S_contig19:11851..11940Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 11852..11940 -
1681462969.442151-CDS-Ecto-sp13_S_contig19:12692..128461681462969.442151-CDS-Ecto-sp13_S_contig19:12692..12846Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 12693..12846 -
1681462969.450398-CDS-Ecto-sp13_S_contig19:13084..131261681462969.450398-CDS-Ecto-sp13_S_contig19:13084..13126Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 13085..13126 -
1681462969.4586413-CDS-Ecto-sp13_S_contig19:13463..135621681462969.4586413-CDS-Ecto-sp13_S_contig19:13463..13562Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 13464..13562 -
1681462969.4668705-CDS-Ecto-sp13_S_contig19:14087..143581681462969.4668705-CDS-Ecto-sp13_S_contig19:14087..14358Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 14088..14358 -
1681462969.4752605-CDS-Ecto-sp13_S_contig19:15305..154931681462969.4752605-CDS-Ecto-sp13_S_contig19:15305..15493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig19 15306..15493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig19.6024.1

>prot_Ecto-sp13_S_contig19.6024.1 ID=prot_Ecto-sp13_S_contig19.6024.1|Name=mRNA_Ecto-sp13_S_contig19.6024.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=401bp
MWLRTGPVLLGFCSMPTVSFVLPPTPILASVNCRATCTADFRVPVVTGHG
GSTGPGAKPLQRRSYTRIAPKSCRCCCNFCRGVSHAFGGASTSRATIGTR
LASREGNHVSANTPSDAIPAFASNDGVSYLRNPDTASEIWLVGVVHGQES
SVELSKSVVRTTRPQVVMLELDSSRLDDLPPGKAQKAEDGLTWFMPEKQP
DNAVAQGVTLESDGDDVELSRGARWKGPLAFMSSSRAKSLVGAMKAIIDV
FEEEEVSEMEVAVLEAQACGAQILLGDRDFEETKRRLVAAGLADTVGDER
LDDPEALLNDSMSVSNRKKFAGLDLRKPETREAAGEHYAAMKRLSNQRAL
EAMVPERDEVMARNLMTLKGKTITVALVGLFHVDGIERILKHNGWNHGPA
*
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mRNA from alignment at Ecto-sp13_S_contig19:9716..15551-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig19.6024.1 ID=mRNA_Ecto-sp13_S_contig19.6024.1|Name=mRNA_Ecto-sp13_S_contig19.6024.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5836bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19:9716..15551- (Ectocarpus species13 EcNAP12_S_4_19m)
CACAGCTTCAGCGCACGCCAGAACGCACTCTCTCTACCTCTCGTAACGGA GAGAAACCATGTGGCTCAGAACCGGGCCGGTGCTGCTGGGTTTTTGCTCG ATGCCGACAGTCTCGTTCGTGCTGCCTCCAACGCCGATCTTGGCCAGCGT CAACTGCAGAGCTACATGTACTGCTGATTTTCGGGTTCCTGTCGTCACCG GACACGGTGGGTCGACAGGGCCTGGAGCCAAGCCACTCCAGCGCCGGTAA GCTGGGTGCACGCTGCGATTTCATGCTACTCCCACGCACGGCTGTTGTAT TACATCCTTCGCAGAGGCGCATTTTGAAGCTGTTTCTAAACCCGATCCGC AGCTGCTGCTGTGCACATGTATGCTAGGTTACAGCAGTCCCACGGTTGTA CCAGGTGCTGCCGTCGTTGATAGTCACTCACCCTGTGAAGCTTGGCACCG ACCGATTGATCGTAAACCACTGCTGTAGGCATGCGTTGGGAGGCAGGCGA AACACGCATACTGCCACATGTACAGCGCTACATATGTGAAGTCGTGTCTG TTCGCGTGCCTCTGCGCAATTGCTGCTCGCATCGGTCATCAAAACGGGTG TCCGAAAATACTCCCAAGTTGCCTCGTGTGAACACGCAAGCGAATGGCTC CCGTGATTATCGACTTCGTTGGGGACAACAGTACCGCTTGCAGGACATCT CGGTTGACATTCCAAGGCCTGGTGCACTCTCTGCGTCACTCTGACTTGAG AAAGACACGCGCGGTAGTACCCGCCCTCTCGCAAGCAATCAGGAACCAGG CTCGACCACGCCTCGCGCATGGTACAATGTGCTTCGTGTTTGTCAAGGCA AAAAGTCGAGCATTGCCGTTCGCGGGGAATGTGAAACACTGTGCGCTGGT GGCTCGCTGTTTCACTCTGTTCATGACTTCATCAGTTCCTTTCGTACGAC AGGGTGCAGCATTTCAGAGAGGAAATCTCCTGTTTCCTCAAGGAAGAAAA TATGCTACACTCTTCATCTGCGTCCTTCGGCTGCTGCTTCTCCTCGTGTT GTGGAGGCAATTGTTGTTAATACGATACAAGCTTGTTGTTTTACACTGAC TGTGTGCTTCCTTGGATAGTGCTCTTGATCCTTACCCGTCGATTGCCTTA TGGGGAACCGCACCGAATTCGTCTCTCGCTGCGTCCACTACAGCAGCTAC ACCAGGATCGCTCCAAAAAGCTGCCGGTGTTGCTGCAACTTTTGCAGAGG TGTGTCCCACGCCTTTGGTGGCGCATCCACGTCGAGAGCCACAATTGGTA CGAGGTTAGCATCCCGCGAGGGAAACCACGTGTCCGCGAACACACCATCC GACGCAATCCCAGCGTTTGCCTCCAACGACGGCGTTTCGTACCTTCGGAA CCCGGATACCGCATCAGAGATTTGGCTTGTCGGGGTCGTGCACGGCCAAG AATCCAGCGTGGAGGTGAACGGAACGTTGACACGGTCGTTAAAACGGCTG TTAGTACAAATTTCAATTTGGTGCACCTCAAGTGTGGGTCCTGTAGCCTC CAATGCTTTGTGGCCTGCAGCGGCTTTTATGACCTACGTGGAAAGAGGAA GCCCCGATTTTCTTCCCCATGGTCACTCGGGTAGAGCCTGTCTGGCATGC AAAGGCCTTGGATTATTTTCGAACACCTTCAACCTCGCGGGGAGCAGAGT CTTCCAAAGTTACGTTCTCTTGAGAAAGAAAGACAGGCTTCACACATGCC AGTCATTTTGGCCTCCTGGGGTTGGTGACGAATTTGAGCTGGCGGTACCT CAATGGTTGCAACACCTGGAACGAGACCATATATATTGTGTTTCGTCTTC GCACGCGTGTTTGCTGTTTCGCTTCTTTCTTTTGTTTGTCTTCATGAGCT TGAACAACCCCAATTTAGTGGAACCAACTGTTGCACGAAAAGCTTGGTCT CACACAGCTTTGCGGTCTGCGTCTTGCTCGATCGTGCAGCTGTCGAAGAG CGTGGTCCGGACAACTCGGCCGCAAGTCGTCATGTTAGAACTTGATTCAA GTCGCCTTGACGACTTGCCACCAGGAAAAGCTCAAAAGGTAGGCCTAGCT CTCGCTGTGTGGTCTCAGCCCCGAAGAACGTCCGCCGAATATGGCCGAAT ATCTTGCAGCTTTACATGCATCTCGGTTTGATCACAGAGCTGAGATCAGC TCCACTCTGTTCTACGCGATTGACAAGGTGACAGGCTCTGTCTGACACCT AGAAGGCGTACGTTGGCACGTGATCATTTTGCAGGGCTATATCGATTGTG CTCGTTTTCTATGCTGTGTTGTGTCGCGAAATCGCATGTGTGTGTGTGCG TGTGTGTGTGTGCGTGTGTGTTTGTTCACGTCGCCTTTTTTTCCTCACCG ATGCAATCGTGTTGTATTGTGGCAGGCTGAGGACGGGTTGACCTGGTTTA TGCCGGAGAAACAACCGGTAGGCTCCTTCCAATCCGGGCATGACGCAGAC GATCGATCTCATTTTTTTGAAACAGTCGTTGTGTTCATTTAGTCTTGATT TGCGCGAGAGTAGCTCAGAGGGTCGATCGTCAGCCAACGGCAGCATGCAG GGTTTGGGCTTGACTCTTGGTGGCGCGGGTGTACCTTTAAGATGCGAGAA TCATCTCCCTGTCACACCCTAGCACCGCGCTGTTGAAACTCGTTTCGTGT GTCAGGACAACGCCGTTGCTCAAGGCGTCACCTTGGAGAGCGATGGTGAC GACGTTGAGTTGTCTCGCGGCGCGAGGTGGAAAGGGCCGTTGGCGTTCAT GTCCAGCTCAAGGGCGAAGTCGTTGGTGGGGGCCATGAAGGCCATCATCG ACGTTTTTGGTGAGATTTAATTTCGGTCTGTGCCCTTTGTGTTTGCTCTA ACCTTTTTGTTGGGATGTTCTTCATGTAAAGAATGTTCTTGTCTTCTTCT GTGGAGAACGTGAACACGACGCAAAGCTTCTATCCGTGGAAGTCGACTGC CGGAGTTTCACAATTTCTGTCAAGTGTACGGTAAGAGGAACATGCGAAGA AGGGCGCTGTAACATGCTGGAGGAGGCTGCCATACAAAACGTCGAATCTT CCTCACGACAAACGTGATGCTGTGAGAAAGCGCGAAATATATCTATACGA CATTGTGTTGCGTCATTTCCTAGTGGTTAACCTCGCTAACCTGCTAGTAA CAGGCTGTGGGTTCGATTCTCTTGCGGTCGAAAACTATTTATTTCCTGAG TAAACACATCCGGTTGCACCGTTTGCGCGGGAAAGAGGCGGCTGAACCCT GCTCTCGATCGAAACGAAGGCAGGGACGGCAAGAGGAAAGGTGGTGCAAT CAATTTATCCTCGTATGTCAGGACAAAAGGCTAGCTTGACCTTCCTCCTG TGTGACCTGGGCTGTGACGTCGAACACATACACCGAGCGGTGTTAAACTT CACCAAAAACAACTGGCACGAACACACATCCGTTGCACCACATCCCGAAG CAGCGGGACGGTATGTCATTCTGGTCGACCCCTTTTTTGTCCAACTCTTG TCTCAGCCCGCACAACAGCCTGTCCCCCCGCCCCCCGCGGCGTCCGATAT GCGGTGTGCAGAGGAGGAAGAAGTCAGCGAAATGGAAGTTGCAGTACTTG AGGCTCAAGCCTGCGGTGCTCAGATTCTCCTTGGGGACAGGGATTTCGAG GTGAATGTTCTCATCTCGTCCGGTATGAGACCAGGTACCAGCTCTCCAAC CTACCTTGGCGGACAATGATTAAAATCCTTTCGGGTTGATGAACAAAGGT AGTTCGTTTTCTTCGGACGACTGTATTAGACGTAGGCACGGGCTCAGGCA AAAGAGTTGAGCTCAGCGCAACGAAATCAAGTGCACGCTTACTCGTTGTC TGCCTTTTTAATCTATTTCGACCGCGTTGTTGAAGTGTTGATCCCAACCC GCATCTATGCTACACCGAGTGTCACCGTCGACTGAAAAAGGTGTTCGATT CTCTGAAATTCCACAGTTTTTCTTCTGTGCCAACCAACGGTTCACTTTCA CAACTTTACACTTGATGCAATAGGACGATTTCTTTTTTGGACCGGCAGGA GACCAAGCGCCGGCTAGTGGCAGCGGGGCTTGCAGACACAGTAGGCGACG AACGGCTGGATGATCCGGAAGCCTTGTTGAACGACTCCATGTCCGTGTCG AACAGGAAGAAGTTCGCTGGCCTGGATTTAAGGGTAAGAAATCAGGATCA CCTCGAGTGATTTTTGGTGCCTACACATGTTGTTCCATTCGCATCTGTTT CGTTCTTTTTTGTCTTTTCAGATTTAGATTTGGCAGGACGCGCGGGCACG TTGATTGCATGACCCCGCTTGAAGTCACTCATGTTCAATCAATAATATGG ACCATTCAGCAGGGACAGAGCTACGTACCGTGACGGGTGTTGTAATGTTG TGTTGATCTGACTGTGAGCGGTTGTGAGTGTTCCGAACCATCCATGATTG AGGTGTACCATGTGGAACGAATGTGGCTGCGAGAGTTTCCCAAACGTACT TCGTATCGTTGCTTATGCCAAATGTCGCTGGTCAGCTGCGTATGTTTGTT TCCAGCGTTCTGCGGATACTTGAACATGAGCATGTTATGGTACCATTGTT GCGTGTTCGGACACAGTGCCTTCGATTCGATGCGCATTTCTACAGAAGCC GGAAACGCGTGAGGCTGCGGGAGAACACTACGCTGCTATGAAACGTCTGT CCAACCAACGGGCCCTTGAGGCTATGGTCCCTGAGCGAGATGAGGTAATT GCGCGGTCTTCTGGTCCGGGGCATGCATACCTGGTCAATCTCGTATTTTT TGTTGGTTCCGTTTGCTGATACTGCTATCGCCGTTCTTACTTTCTACGGT TGTAGCTTTCGAAGCATCTCCTTTCACATGATAACGATTGTGGATAATGT ATCTCAATGTTTATTGCGTCATTTCGAAGTATGTTCCTGGGCGTCTTCGG TTGTGATCAACTGAGCGTAACCTGTTCCGTGATTCACAGGGGACGATGTC CAGCCACCTTACCATATTTCTTCCTGCCGTGTTTACTCACAGCACACCAT GTTGTTCGCCGCTGTTGAGGGCAACGTTGGCGCAGCAGGTTTTCTGAGGC CATCGCTGACGCTGCTGGCGTGTTTCCTCCTTGATTTTTTCTCCAGGTGA TGGCCAGAAACCTCATGACCCTAAAAGGGAAGACCATCACAGTAGCCCTT GTTGGATTATTTCACGTGGACGGCATCGAAAGGATCCTCAAGCACAACGG TTGGAACCACGGGCCGGCATAACTACCCCTTCGCGAACGCATTCGTCTAT CAATTCCGCCGTGGCAATGTCACCATGCGCAAGCTTTTGAGTGCGCTGCG AGCTCTTGGCACTGCTGAGAATGCATCGACGCGGCGTAGCAGGAACAGTC GATGTCCGATGACTCTTCCTAGCGGATGGTAGATCACGTGATGATCGGCA TCGGAGAAGATTCCGGTCCGGACACCTGGGCGCGTCTGGTGAGCACGGCA TATACAGCACTGGCTAGGCCTGCGCGAGTCGCACATGCTCCTTCTGTCGG TGAGCTCAGCGTTTTGTGAACGACCGGAGGGCCGAGGCACCTACCTCTCC TGGAGCAAAGTGCCTACCCCGTACCGTACCGTATGGCTCGGCATGGAACA GATGCCATCCACTTTTTCGAGAACATGAAACGCTTTACCGGGCTGAGTGG AGTCTACACGGCGCTCGCGCGTTCCACCAGGCGGACTGTGGATAAGTAAT TGCTCAACGCCGCAGGTGCGAAAGTGTTACACCTGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19:9716..15551-

>mRNA_Ecto-sp13_S_contig19.6024.1 ID=mRNA_Ecto-sp13_S_contig19.6024.1|Name=mRNA_Ecto-sp13_S_contig19.6024.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1203bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19:9716..15551- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGCTCAGAACCGGGCCGGTGCTGCTGGGTTTTTGCTCGATGCCGAC
AGTCTCGTTCGTGCTGCCTCCAACGCCGATCTTGGCCAGCGTCAACTGCA
GAGCTACATGTACTGCTGATTTTCGGGTTCCTGTCGTCACCGGACACGGT
GGGTCGACAGGGCCTGGAGCCAAGCCACTCCAGCGCCGCAGCTACACCAG
GATCGCTCCAAAAAGCTGCCGGTGTTGCTGCAACTTTTGCAGAGGTGTGT
CCCACGCCTTTGGTGGCGCATCCACGTCGAGAGCCACAATTGGTACGAGG
TTAGCATCCCGCGAGGGAAACCACGTGTCCGCGAACACACCATCCGACGC
AATCCCAGCGTTTGCCTCCAACGACGGCGTTTCGTACCTTCGGAACCCGG
ATACCGCATCAGAGATTTGGCTTGTCGGGGTCGTGCACGGCCAAGAATCC
AGCGTGGAGCTGTCGAAGAGCGTGGTCCGGACAACTCGGCCGCAAGTCGT
CATGTTAGAACTTGATTCAAGTCGCCTTGACGACTTGCCACCAGGAAAAG
CTCAAAAGGCTGAGGACGGGTTGACCTGGTTTATGCCGGAGAAACAACCG
GACAACGCCGTTGCTCAAGGCGTCACCTTGGAGAGCGATGGTGACGACGT
TGAGTTGTCTCGCGGCGCGAGGTGGAAAGGGCCGTTGGCGTTCATGTCCA
GCTCAAGGGCGAAGTCGTTGGTGGGGGCCATGAAGGCCATCATCGACGTT
TTTGAGGAGGAAGAAGTCAGCGAAATGGAAGTTGCAGTACTTGAGGCTCA
AGCCTGCGGTGCTCAGATTCTCCTTGGGGACAGGGATTTCGAGGAGACCA
AGCGCCGGCTAGTGGCAGCGGGGCTTGCAGACACAGTAGGCGACGAACGG
CTGGATGATCCGGAAGCCTTGTTGAACGACTCCATGTCCGTGTCGAACAG
GAAGAAGTTCGCTGGCCTGGATTTAAGGAAGCCGGAAACGCGTGAGGCTG
CGGGAGAACACTACGCTGCTATGAAACGTCTGTCCAACCAACGGGCCCTT
GAGGCTATGGTCCCTGAGCGAGATGAGGTGATGGCCAGAAACCTCATGAC
CCTAAAAGGGAAGACCATCACAGTAGCCCTTGTTGGATTATTTCACGTGG
ACGGCATCGAAAGGATCCTCAAGCACAACGGTTGGAACCACGGGCCGGCA
TAA
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