mRNA_Ecto-sp13_S_contig18787.5917.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: D7FQE9_ECTSI (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE9_ECTSI) HSP 1 Score: 249 bits (637), Expect = 1.150e-77 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 1
Query: 1 RCDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
RCDPREDFGGSHPDPNLAYAS LVRRMGLDSS QPLQGAAA+AAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG
Sbjct: 273 RCDPREDFGGSHPDPNLAYASGLVRRMGLDSSAQPLQGAAADAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 401
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: S9W0P8_9TRYP (Uncharacterized protein (Fragment) n=1 Tax=Strigomonas culicis TaxID=28005 RepID=S9W0P8_9TRYP) HSP 1 Score: 164 bits (414), Expect = 8.130e-49 Identity = 86/129 (66.67%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 1 RCDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
R DP DFGG HPDPNL YA+DLVR MGL G AAA AE P+ GAA DGDADRNM++G RFFV PSD+LAV+AANA AVP+F RAGGL ARSMPTSGA+DRV +G+ FE PTGWK+FG
Sbjct: 51 RTDPLPDFGGCHPDPNLTYAADLVRAMGLGPDGSAC--AAALGAEVPSFGAAFDGDADRNMVVGARFFVNPSDALAVLAANADAVPFFRRAGGLRAVARSMPTSGAVDRVAAAKGLRCFEVPTGWKYFG 177
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: A0A835Z552_9STRA (Phosphoglucomutase, cytoplasmic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z552_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.760e-48 Identity = 93/129 (72.09%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 RCDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
RC+P EDFGG HPDPNL YA DLV RMGL + G L AA AAEPP GAAADGD DRNM+LGRRFFVTPSDSLAVIAANA A+P+F GL AARSMPTS ALDRV G +FETPTGWKFFG
Sbjct: 234 RCEPLEDFGGGHPDPNLTYADDLVARMGLAADGSVLP-AAEGAAEPPVFGAAADGDGDRNMVLGRRFFVTPSDSLAVIAANAQAIPHFKD--GLKAAARSMPTSAALDRVGAALGFRVFETPTGWKFFG 359
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: A0A7S1MRQ0_NEODS (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MRQ0_NEODS) HSP 1 Score: 167 bits (424), Expect = 1.010e-46 Identity = 86/135 (63.70%), Postives = 101/135 (74.81%), Query Frame = 1
Query: 4 CDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGA-------AANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
+P DFGG HPDPNL YA+DLV MGL++ G+P GA A+ AA PPT GAA DGDADRNMILG +V+PSDS+A+IAANA A+PYF AGG+ ARSMPTSGALD V ++ GVP+FE PTGWKFFG
Sbjct: 266 AEPLPDFGGGHPDPNLTYAADLVEAMGLNADGKPWAGAKLLAGKAASKAAAPPTFGAACDGDADRNMILGASCYVSPSDSVAIIAANADAIPYFRAAGGVKALARSMPTSGALDLVAKQMGVPIFEVPTGWKFFG 400
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: S9VKW8_9TRYP (Phosphoglucomutase n=1 Tax=Strigomonas culicis TaxID=28005 RepID=S9VKW8_9TRYP) HSP 1 Score: 164 bits (414), Expect = 1.120e-46 Identity = 86/129 (66.67%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 1 RCDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
R DP DFGG HPDPNL YA+DLVR MGL G AAA AE P+ GAA DGDADRNM++G RFFV PSD+LAV+AANA AVP+F RAGGL ARSMPTSGA+DRV +G+ FE PTGWK+FG
Sbjct: 51 RTDPLPDFGGCHPDPNLTYAADLVRAMGLGPDGSAC--AAALGAEVPSFGAAFDGDADRNMVVGARFFVNPSDALAVLAANADAVPFFRRAGGLRAVARSMPTSGAVDRVAAAKGLRCFEVPTGWKYFG 177
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: A0A7S3W6Y8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W6Y8_9SPIT) HSP 1 Score: 164 bits (414), Expect = 2.150e-46 Identity = 85/128 (66.41%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 4 CDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
C+P EDF G HPDPNL YA+ L MGL+ GQ EPP +GAAADGDADRNMI+GRRFFVTPSDS+AVIAA+A A+P+ +RAGGL ARSMPTSGALDRV + G+P+FETPTGWK+FG
Sbjct: 275 CEPSEDFNGGHPDPNLTYAAALATLMGLN--GQTPD-------EPPVIGAAADGDADRNMIVGRRFFVTPSDSVAVIAAHADALPWLSRAGGLKALARSMPTSGALDRVASQLGLPLFETPTGWKYFG 393
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: A0A0M0K746_9EUKA (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K746_9EUKA) HSP 1 Score: 167 bits (424), Expect = 3.140e-46 Identity = 86/128 (67.19%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 4 CDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
C+P E F G HPDPNL YA +LV MG+ ++G GAA +A+ P GAAADGDADRNMILGR FFVTPSDSLA+IAA+A +P+FA AGGL ARSMPTSGA+DRV QG+P FETPTGWKFFG
Sbjct: 333 CEPSETFNGGHPDPNLVYAHELVATMGVTAAG----GAAPSASSAPVFGAAADGDADRNMILGRGFFVTPSDSLALIAAHAHLIPWFANAGGLKAVARSMPTSGAVDRVAAAQGLPFFETPTGWKFFG 456
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: A0A7S0NZK6_9EUKA (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZK6_9EUKA) HSP 1 Score: 167 bits (422), Expect = 5.500e-46 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 4 CDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
C+PR+DFGG HPDPNL YAS LV MGL S G + + PP LGAAADGD DRNMILG+RFFVTPSDS+A+IAA+A A+P+ A+ GGL ARSMPTS ALDRV + G+P++ETPTGWKFFG
Sbjct: 327 CEPRDDFGGGHPDPNLTYASQLVETMGLLSDGAINE----RTSSPPELGAAADGDGDRNMILGKRFFVTPSDSVAIIAAHAHALPWLAKLGGLRALARSMPTSAALDRVAQALGLPLYETPTGWKFFG 450
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: A0A6V1U5R2_HETAK (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U5R2_HETAK) HSP 1 Score: 168 bits (425), Expect = 8.290e-46 Identity = 85/128 (66.41%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 4 CDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
+P EDFGG H DPNL YA +L MG+DS G P+ G A EPP GAAADGDADRNMILGRRFFVTPSDS+A++AA+A +P+F GGL G ARSMPTSGAL+RV R +P FETPTGWKFFG
Sbjct: 692 AEPLEDFGGGHADPNLTYAHNLTEVMGVDSKGLPVTG---QAREPPQFGAAADGDADRNMILGRRFFVTPSDSVAILAAHADVIPFFRDQGGLKGVARSMPTSGALERVAARLNLPFFETPTGWKFFG 816
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Match: A0A7R9W9M3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9M3_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.340e-45 Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 1 RCDPREDFGGSHPDPNLAYASDLVRRMGL--DSSGQPLQGAAANAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 387
RCDPR DFGG HPDPNL YA+ L+++MGL D S P +A+AA P LGAA DGD DRN+I G FFVTPSDSLAVI N A+P+FA GG GG ARSMP+S ALD V E + VP F TPTGWKFFG
Sbjct: 52 RCDPRPDFGGCHPDPNLTYAAALIKKMGLSPDGSADP----SADAAALPALGAANDGDGDRNLIAGAGFFVTPSDSLAVICDNWEAIPHFASRGGPGGVARSMPSSAALDVVAEARDVPCFVTPTGWKFFG 178 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18787.5917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18787.5917.1 >prot_Ecto-sp13_S_contig18787.5917.1 ID=prot_Ecto-sp13_S_contig18787.5917.1|Name=mRNA_Ecto-sp13_S_contig18787.5917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp RCDPREDFGGSHPDPNLAYASDLVRRMGLDSSGQPLQGAAANAAEPPTLGback to top mRNA from alignment at Ecto-sp13_S_contig18787:132..518+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18787.5917.1 ID=mRNA_Ecto-sp13_S_contig18787.5917.1|Name=mRNA_Ecto-sp13_S_contig18787.5917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18787:132..518+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18787:132..518+ >mRNA_Ecto-sp13_S_contig18787.5917.1 ID=mRNA_Ecto-sp13_S_contig18787.5917.1|Name=mRNA_Ecto-sp13_S_contig18787.5917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18787:132..518+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |