mRNA_Ecto-sp13_S_contig18686.5873.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18686.5873.1
Unique NamemRNA_Ecto-sp13_S_contig18686.5873.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A6H5JKZ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ4_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 1.220e-132
Identity = 214/242 (88.43%), Postives = 221/242 (91.32%), Query Frame = 1
Query:    1 MGDFVAKSMAAEATEAGXXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            MGDFVAKSMAA ATEA           +PADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMN+LHLSTT A XXXXXXXX    TAQDMEPIESFGSVASAHPDESARWFETGLGAV+DGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAG+G+ASGGGS GAAAAV TPRIPWYIMTSPLNDAATR+FF SN+FFGVPKEDVFFFSQ
Sbjct:    1 MGDFVAKSMAATATEAAGCGGCGG---IPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNQLHLSTTAAXXXXXXXXXSGGRTAQDMEPIESFGSVASAHPDESARWFETGLGAVRDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGSGNASGGGSIGAAAAVTTPRIPWYIMTSPLNDAATRDFFASNNFFGVPKEDVFFFSQ 239          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: D8LEL4_ECTSI (Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL4_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 4.480e-127
Identity = 223/243 (91.77%), Postives = 231/243 (95.06%), Query Frame = 1
Query:    1 MGDFVAKSMAAEATEAGXXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAG-NGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            MGDFVA SMAA      XXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMN+LHLSTT AAXXXXXXXXXXXX AQDMEPIESFGSVASAHPDE+ARWFETGLGAV+DGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAG +G+AS GGSNGAAAAVATPRIPWYIMTSPLNDAATREFF ++D+FGVPKEDVFFFSQ
Sbjct:    1 MGDFVASSMAATXXXXXXXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNQLHLSTT-AAXXXXXXXXXXXXAAQDMEPIESFGSVASAHPDEAARWFETGLGAVRDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGCSGNASDGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFAASDYFGVPKEDVFFFSQ 242          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A835YRE5_9STRA (Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.960e-46
Identity = 105/220 (47.73%), Postives = 131/220 (59.55%), Query Frame = 1
Query:   82 VPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALA---AGNGDAS--GGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            VPA LR  + A GQ HVF +VD G V      +S LVAQL  IDP R+N L  +  E                 D+EP ++  S +SA  ++   W + GL A+  G+VA VVL GGQGTRLGFDGPKG+YDIGLPS K+LFQL AER+RR   LA   AG    S  G G+ G+A+      +P ++MTSPLND AT  FF  N  FG+P+ D+ FFSQ
Sbjct:    9 VPAALRQAYDAAGQGHVFGFVDRGLVSPPG--VSQLVAQLEAIDPQRVNSLFKAAME-------HDAACGGELDDLEPPDNVVSASSATDEQQEEWVQEGLRAIAAGEVAAVVLAGGQGTRLGFDGPKGVYDIGLPSHKSLFQLLAERVRRTVTLAETAAGRRTPSLRGSGNGGSAS------LPLWVMTSPLNDVATHAFFEENGRFGLPESDLHFFSQ 213          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A7S4UPE1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UPE1_9DINO)

HSP 1 Score: 168 bits (425), Expect = 8.730e-46
Identity = 97/213 (45.54%), Postives = 127/213 (59.62%), Query Frame = 1
Query:   88 ADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            A LRA + A GQ HVF+Y+D G V AG +  +AL+AQLR ID   ++K + S    A             + ++ P + F  +A   P + A+W  +GL A+  G+VA  +L GGQGTRLGFDGPKG YDIGLPS K LFQL  ER+ RV  LA   G AS              R+P+ +MTSP+NDA T+ FF    FFG+P+EDV+FF+Q
Sbjct:    8 AALRARYEAAGQSHVFRYLDEGKVPAGEE--AALLAQLRGIDLDYVSKSYKSAMAEAAAGV--------ASAELTPPDEFTCLADTAPSDIAQWESSGLAAIGRGEVAACILAGGQGTRLGFDGPKGCYDIGLPSKKPLFQLCVERIIRVVRLAREQGGASA-------------RVPFLVMTSPINDAETKAFFAERKFFGLPEEDVWFFAQ 197          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A662Y733_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y733_9STRA)

HSP 1 Score: 154 bits (389), Expect = 9.840e-40
Identity = 91/217 (41.94%), Postives = 126/217 (58.06%), Query Frame = 1
Query:   82 VPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIES--FGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            +PA +R ++   GQ H+F++VD+G V A   E   LV  LRT +P+ +  L   +T+A             T  ++ P+E      ++   P+  A+WFE GL AV +G VA +VL GGQGTRLGF GPKGMYDIGLPSGK+LF+L A+R+ +V ALA    + +            TP++PW IMTS +N  AT  FF  N FFG+ +  + FF Q
Sbjct:  143 IPATIRRSYEDAGQGHLFQFVDAGKVTA--QEACELVESLRTYNPSELAGLFERSTKA-------DSVAKGTVDEVTPLEDGVVHQLSEVAPELKAKWFEQGLEAVANGTVAALVLSGGQGTRLGFAGPKGMYDIGLPSGKSLFELFAQRILKVQALAQSRFNLA-----------ETPQVPWLIMTSEMNHEATVVFFRDNQFFGLSRAQLHFFCQ 339          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: W7TJ06_9STRA (Udp-n-acetylglucosamine pyrophosphorylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJ06_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.080e-38
Identity = 90/204 (44.12%), Postives = 117/204 (57.35%), Query Frame = 1
Query:  121 QDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLH--LSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            QDHV  YVD+G   A  +E ++L+ Q+  +D   +N++   L    +A               +  P+    SV +  P     W E GL A+  GKVA +VL GGQGTRLGFDGPKGMYDIGLPSGK++FQL AER+ RV ALAA     S  G +          IP+Y+MTSPLN   T++FF  N++FG+   DVFFF Q
Sbjct:   23 QDHVLSYVDAGL--ATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGN------DEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQ 218          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A812UIU5_9DINO (Uap1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UIU5_9DINO)

HSP 1 Score: 148 bits (373), Expect = 3.270e-38
Identity = 95/216 (43.98%), Postives = 118/216 (54.63%), Query Frame = 1
Query:   82 VPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARM-NKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            +PA LR  F   GQ  VF++VDSG   A  +E  ALV QL  ID   + N L  +  EAA             A D+EP + F  +A   P++ A W   GL A+  G+VA  VL GGQGTRLGFDGPKG YDIGLPS K LFQL  E+L R+ A+A        GG N        P++P+ IMTSP+    T  FF  + +FG   E V+FF Q
Sbjct:    9 IPAALRERFETAGQSQVFRFVDSGV--ATEEETKALVTQLEDIDLEYVANSLKSAQAEAAAIAE---------AVDLEPPDHFTCLADVSPEDIASWGACGLDAIGRGEVAACVLAGGQGTRLGFDGPKGCYDIGLPSHKPLFQLFVEKLLRLRAMAQ-----EAGGPN--------PQLPFLIMTSPMTHQQTVSFFEEHSYFGSSNEHVWFFEQ 200          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: C1FIH1_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1FIH1_MICCC)

HSP 1 Score: 148 bits (374), Expect = 4.240e-38
Identity = 90/211 (42.65%), Postives = 120/211 (56.87%), Query Frame = 1
Query:   94 LRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            LRA + A GQ HVF + D    K    E  AL AQLR++D   + K+                       ++EP+ +  SV  A  ++ + W E GLG    G++AVV+L GGQGTRLG   PKGMYDIGLPSG+TLF+LQAERL ++ A++  + +A+ G         A  R+PWYIMTSP   AAT ++F  N+FFG+   DV FF Q
Sbjct:   12 LRARYEAAGQGHVFAHWD----KCDEGERDALAAQLRSVDLDHVKKIF-------DRSIADHDAGAAAKGEIEPVVADASVLKASAEDLSEWREAGLGVASLGELAVVLLAGGQGTRLGSSAPKGMYDIGLPSGRTLFRLQAERLAKLMAMS--SEEANQG---------APVRVPWYIMTSPHTHAATEKYFHDNEFFGLDSADVTFFQQ 200          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A3N2PYE0_9PEZI (UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2PYE0_9PEZI)

HSP 1 Score: 148 bits (373), Expect = 4.960e-38
Identity = 84/215 (39.07%), Postives = 121/215 (56.28%), Query Frame = 1
Query:   88 ADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPI--ESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            ADL+A + A GQDHVF + DS       +E ++L  QL   DPAR+N++   T  A                D+EP+   +  S+  + P++   W++ GL  +   K  VV++ GGQGTRLG   PKG YDIGLPS K+LF++QAER+R++  LAA +           AA+ + P +PWY+MTS      T ++F  N++FG+ K DVF F Q
Sbjct:   26 ADLKAKYTAAGQDHVFTFYDS----LSPEEQASLYNQLLGFDPARINEI---TDRALNPTKAKPRDLDRAQDDIEPLPESATASILDSKPEDLDTWYKAGLDLIAQNKAGVVLMAGGQGTRLGSSAPKGCYDIGLPSHKSLFRIQAERIRKIQELAAAH-----------AASDSKPVVPWYVMTSGPTRGPTEQYFEENNYFGLDKADVFIFEQ 222          
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A2S5B6T0_9BASI (Uncharacterized protein n=1 Tax=Rhodotorula taiwanensis TaxID=741276 RepID=A0A2S5B6T0_9BASI)

HSP 1 Score: 147 bits (372), Expect = 5.680e-38
Identity = 91/213 (42.72%), Postives = 120/213 (56.34%), Query Frame = 1
Query:   94 LRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEP--IESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
            LR T+ A GQ HVF + D    K  ++E + L  QL +IDP R+N +H S+ +A             T +D+ P   +  GSV   + DE+  W E GL A++DGKVAV+++ GGQGTRLG   PKG YDI LPS K+LFQLQAER+RR+  +A                  A   +PWY+MTS      T +FF  N FFG+ KE+V FF Q
Sbjct:   12 LRETYDAAGQGHVFAFWD----KLAANEQADLFRQLSSIDPERVNSVHKSSLQAEKEAATS------THEDITPPPADQSGSVIG-NEDEAKSWNEVGLKAIRDGKVAVLLMAGGQGTRLGSSAPKGCYDINLPSRKSLFQLQAERIRRLQTVAG-----------------ADKPVPWYVMTSGPTRKPTEQFFADNAFFGLDKENVVFFEQ 196          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKZ4_9PHAE1.220e-13288.43Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LEL4_ECTSI4.480e-12791.77Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=... [more]
A0A835YRE5_9STRA1.960e-4647.73Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=... [more]
A0A7S4UPE1_9DINO8.730e-4645.54Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A662Y733_9STRA9.840e-4041.94Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
W7TJ06_9STRA2.080e-3844.12Udp-n-acetylglucosamine pyrophosphorylase n=2 Tax=... [more]
A0A812UIU5_9DINO3.270e-3843.98Uap1 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
C1FIH1_MICCC4.240e-3842.65Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
A0A3N2PYE0_9PEZI4.960e-3839.07UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=... [more]
A0A2S5B6T0_9BASI5.680e-3842.72Uncharacterized protein n=1 Tax=Rhodotorula taiwan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18686contigEcto-sp13_S_contig18686:2224..3206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score379.0
Seed ortholog evalue1.6e-102
Seed eggNOG ortholog2880.D8LEL4
Preferred nameUAP1
Model size726
KEGG rclassRC00002
KEGG koko:K00972
KEGG ReactionR00416
KEGG Pathwayko00520,ko01100,ko01130,map00520,map01100,map01130
KEGG ModuleM00361,M00362
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0003977,GO:0003983,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006011,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009225,GO:0009226,GO:0009553,GO:0009555,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019276,GO:0019438,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0048229,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051748,GO:0052630,GO:0055086,GO:0061458,GO:0070569,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576
Exons2
EggNOG free text desc.Utp--glucose-1-phosphate uridylyltransferase
EggNOG OGsCOG4284@1,KOG2388@2759
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-23_002570.1
EC2.7.7.23,2.7.7.83
Cds size726
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462957.9297948-CDS-Ecto-sp13_S_contig18686:2223..24731681462957.9297948-CDS-Ecto-sp13_S_contig18686:2223..2473Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18686 2224..2473 +
1681462957.9430044-CDS-Ecto-sp13_S_contig18686:2730..32061681462957.9430044-CDS-Ecto-sp13_S_contig18686:2730..3206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18686 2731..3206 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18686.5873.1prot_Ecto-sp13_S_contig18686.5873.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18686 2224..3206 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18686.5873.1

>prot_Ecto-sp13_S_contig18686.5873.1 ID=prot_Ecto-sp13_S_contig18686.5873.1|Name=mRNA_Ecto-sp13_S_contig18686.5873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
MGDFVAKSMAAEATEAGGGGGGGGGGGVPADLRATFAAHGQDHVFKYVDS
GAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAAAAADADGSGSGTA
QDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLG
FDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAA
VATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ
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mRNA from alignment at Ecto-sp13_S_contig18686:2224..3206+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18686.5873.1 ID=mRNA_Ecto-sp13_S_contig18686.5873.1|Name=mRNA_Ecto-sp13_S_contig18686.5873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=983bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18686:2224..3206+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGACTTTGTTGCCAAGTCCATGGCGGCGGAGGCCACCGAGGCCGG CGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCGTACCTGCGGACCTCCGTG CCACCTTCGCCGCCCACGGGCAGGATCACGTGTTCAAGTACGTCGACAGC GGTGCGGTCAAGGCCGGGTCGGACGAGATCTCCGCCCTCGTCGCCCAGCT GCGCACCATCGATCCTGCCCGTATGAACAAGCTTCATCTCTCTACCACAG GTGCACTCGCAGTAGCAGCAGCAGCAGCAAGAGCAGCATCAACCGTAGCC GCCGGTACCACGCGTGCATTGCTAAGCACGCAGCAGTGTAGTCTGTCGCT GAAACGTCTGGTAGTAAGGTATTGCCTGTGGCGACACCGCCGACGTACAA CAAGAACGATTTTACATTCCAACCCACAGCATGGGTAAATGTTACTCCGC GATACACAGCAGCCTCACTGCCGCTGCGTTCCTTGCTGCTTCCTCGACCA CCCGCAGAGGCGGCAGCAGCCGCGGCCGACGCCGACGGCAGCGGCAGCGG AACCGCGCAAGACATGGAGCCCATCGAGTCGTTCGGCAGCGTCGCCTCCG CGCACCCGGACGAGTCCGCCCGGTGGTTCGAGACCGGCCTTGGAGCCGTG AAGGACGGGAAGGTGGCCGTGGTTGTCCTTTGCGGCGGGCAGGGCACCCG CCTGGGCTTCGACGGGCCTAAGGGGATGTACGACATCGGTCTCCCGTCCG GCAAGACCCTGTTCCAACTACAGGCTGAGCGGCTGCGCCGGGTGTGCGCG TTGGCAGCGGGTAATGGTGACGCTTCCGGCGGCGGTAGCAACGGCGCCGC CGCCGCCGTTGCCACGCCGCGCATCCCCTGGTACATCATGACGAGCCCCC TCAACGATGCCGCGACTCGGGAATTCTTCACCTCCAACGACTTCTTCGGC GTCCCGAAAGAGGACGTATTCTTCTTCTCCCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18686:2224..3206+

>mRNA_Ecto-sp13_S_contig18686.5873.1 ID=mRNA_Ecto-sp13_S_contig18686.5873.1|Name=mRNA_Ecto-sp13_S_contig18686.5873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18686:2224..3206+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGACTTTGTTGCCAAGTCCATGGCGGCGGAGGCCACCGAGGCCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCGTACCTGCGGACCTCCGTG
CCACCTTCGCCGCCCACGGGCAGGATCACGTGTTCAAGTACGTCGACAGC
GGTGCGGTCAAGGCCGGGTCGGACGAGATCTCCGCCCTCGTCGCCCAGCT
GCGCACCATCGATCCTGCCCGTATGAACAAGCTTCATCTCTCTACCACAG
AGGCGGCAGCAGCCGCGGCCGACGCCGACGGCAGCGGCAGCGGAACCGCG
CAAGACATGGAGCCCATCGAGTCGTTCGGCAGCGTCGCCTCCGCGCACCC
GGACGAGTCCGCCCGGTGGTTCGAGACCGGCCTTGGAGCCGTGAAGGACG
GGAAGGTGGCCGTGGTTGTCCTTTGCGGCGGGCAGGGCACCCGCCTGGGC
TTCGACGGGCCTAAGGGGATGTACGACATCGGTCTCCCGTCCGGCAAGAC
CCTGTTCCAACTACAGGCTGAGCGGCTGCGCCGGGTGTGCGCGTTGGCAG
CGGGTAATGGTGACGCTTCCGGCGGCGGTAGCAACGGCGCCGCCGCCGCC
GTTGCCACGCCGCGCATCCCCTGGTACATCATGACGAGCCCCCTCAACGA
TGCCGCGACTCGGGAATTCTTCACCTCCAACGACTTCTTCGGCGTCCCGA
AAGAGGACGTATTCTTCTTCTCCCAG
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