mRNA_Ecto-sp13_S_contig18686.5873.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A6H5JKZ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ4_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 1.220e-132 Identity = 214/242 (88.43%), Postives = 221/242 (91.32%), Query Frame = 1
Query: 1 MGDFVAKSMAAEATEAGXXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
MGDFVAKSMAA ATEA +PADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMN+LHLSTT A XXXXXXXX TAQDMEPIESFGSVASAHPDESARWFETGLGAV+DGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAG+G+ASGGGS GAAAAV TPRIPWYIMTSPLNDAATR+FF SN+FFGVPKEDVFFFSQ
Sbjct: 1 MGDFVAKSMAATATEAAGCGGCGG---IPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNQLHLSTTAAXXXXXXXXXSGGRTAQDMEPIESFGSVASAHPDESARWFETGLGAVRDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGSGNASGGGSIGAAAAVTTPRIPWYIMTSPLNDAATRDFFASNNFFGVPKEDVFFFSQ 239
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: D8LEL4_ECTSI (Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL4_ECTSI) HSP 1 Score: 379 bits (973), Expect = 4.480e-127 Identity = 223/243 (91.77%), Postives = 231/243 (95.06%), Query Frame = 1
Query: 1 MGDFVAKSMAAEATEAGXXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAG-NGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
MGDFVA SMAA XXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMN+LHLSTT AAXXXXXXXXXXXX AQDMEPIESFGSVASAHPDE+ARWFETGLGAV+DGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAG +G+AS GGSNGAAAAVATPRIPWYIMTSPLNDAATREFF ++D+FGVPKEDVFFFSQ
Sbjct: 1 MGDFVASSMAATXXXXXXXXXXXXXXXVPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNQLHLSTT-AAXXXXXXXXXXXXAAQDMEPIESFGSVASAHPDEAARWFETGLGAVRDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGCSGNASDGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFAASDYFGVPKEDVFFFSQ 242
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A835YRE5_9STRA (Udp-n-acetylglucosamine pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE5_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.960e-46 Identity = 105/220 (47.73%), Postives = 131/220 (59.55%), Query Frame = 1
Query: 82 VPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALA---AGNGDAS--GGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
VPA LR + A GQ HVF +VD G V +S LVAQL IDP R+N L + E D+EP ++ S +SA ++ W + GL A+ G+VA VVL GGQGTRLGFDGPKG+YDIGLPS K+LFQL AER+RR LA AG S G G+ G+A+ +P ++MTSPLND AT FF N FG+P+ D+ FFSQ
Sbjct: 9 VPAALRQAYDAAGQGHVFGFVDRGLVSPPG--VSQLVAQLEAIDPQRVNSLFKAAME-------HDAACGGELDDLEPPDNVVSASSATDEQQEEWVQEGLRAIAAGEVAAVVLAGGQGTRLGFDGPKGVYDIGLPSHKSLFQLLAERVRRTVTLAETAAGRRTPSLRGSGNGGSAS------LPLWVMTSPLNDVATHAFFEENGRFGLPESDLHFFSQ 213
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A7S4UPE1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UPE1_9DINO) HSP 1 Score: 168 bits (425), Expect = 8.730e-46 Identity = 97/213 (45.54%), Postives = 127/213 (59.62%), Query Frame = 1
Query: 88 ADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
A LRA + A GQ HVF+Y+D G V AG + +AL+AQLR ID ++K + S A + ++ P + F +A P + A+W +GL A+ G+VA +L GGQGTRLGFDGPKG YDIGLPS K LFQL ER+ RV LA G AS R+P+ +MTSP+NDA T+ FF FFG+P+EDV+FF+Q
Sbjct: 8 AALRARYEAAGQSHVFRYLDEGKVPAGEE--AALLAQLRGIDLDYVSKSYKSAMAEAAAGV--------ASAELTPPDEFTCLADTAPSDIAQWESSGLAAIGRGEVAACILAGGQGTRLGFDGPKGCYDIGLPSKKPLFQLCVERIIRVVRLAREQGGASA-------------RVPFLVMTSPINDAETKAFFAERKFFGLPEEDVWFFAQ 197
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A662Y733_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y733_9STRA) HSP 1 Score: 154 bits (389), Expect = 9.840e-40 Identity = 91/217 (41.94%), Postives = 126/217 (58.06%), Query Frame = 1
Query: 82 VPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIES--FGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
+PA +R ++ GQ H+F++VD+G V A E LV LRT +P+ + L +T+A T ++ P+E ++ P+ A+WFE GL AV +G VA +VL GGQGTRLGF GPKGMYDIGLPSGK+LF+L A+R+ +V ALA + + TP++PW IMTS +N AT FF N FFG+ + + FF Q
Sbjct: 143 IPATIRRSYEDAGQGHLFQFVDAGKVTA--QEACELVESLRTYNPSELAGLFERSTKA-------DSVAKGTVDEVTPLEDGVVHQLSEVAPELKAKWFEQGLEAVANGTVAALVLSGGQGTRLGFAGPKGMYDIGLPSGKSLFELFAQRILKVQALAQSRFNLA-----------ETPQVPWLIMTSEMNHEATVVFFRDNQFFGLSRAQLHFFCQ 339
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: W7TJ06_9STRA (Udp-n-acetylglucosamine pyrophosphorylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJ06_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.080e-38 Identity = 90/204 (44.12%), Postives = 117/204 (57.35%), Query Frame = 1
Query: 121 QDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLH--LSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
QDHV YVD+G A +E ++L+ Q+ +D +N++ L +A + P+ SV + P W E GL A+ GKVA +VL GGQGTRLGFDGPKGMYDIGLPSGK++FQL AER+ RV ALAA S G + IP+Y+MTSPLN T++FF N++FG+ DVFFF Q
Sbjct: 23 QDHVLSYVDAGL--ATPEETASLLTQIEALDLPELNRIFNGLGIEPSASVAAAAGN------DEYAPLSDLASVDTTSPALLREWEEMGLDAIGRGKVAALVLSGGQGTRLGFDGPKGMYDIGLPSGKSIFQLLAERILRVSALAAERFLRSPEGKDCPNEGSTRKHIPFYVMTSPLNHEKTQDFFKENNYFGLCPADVFFFRQ 218
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A812UIU5_9DINO (Uap1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UIU5_9DINO) HSP 1 Score: 148 bits (373), Expect = 3.270e-38 Identity = 95/216 (43.98%), Postives = 118/216 (54.63%), Query Frame = 1
Query: 82 VPADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARM-NKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
+PA LR F GQ VF++VDSG A +E ALV QL ID + N L + EAA A D+EP + F +A P++ A W GL A+ G+VA VL GGQGTRLGFDGPKG YDIGLPS K LFQL E+L R+ A+A GG N P++P+ IMTSP+ T FF + +FG E V+FF Q
Sbjct: 9 IPAALRERFETAGQSQVFRFVDSGV--ATEEETKALVTQLEDIDLEYVANSLKSAQAEAAAIAE---------AVDLEPPDHFTCLADVSPEDIASWGACGLDAIGRGEVAACVLAGGQGTRLGFDGPKGCYDIGLPSHKPLFQLFVEKLLRLRAMAQ-----EAGGPN--------PQLPFLIMTSPMTHQQTVSFFEEHSYFGSSNEHVWFFEQ 200
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: C1FIH1_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1FIH1_MICCC) HSP 1 Score: 148 bits (374), Expect = 4.240e-38 Identity = 90/211 (42.65%), Postives = 120/211 (56.87%), Query Frame = 1
Query: 94 LRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPIESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
LRA + A GQ HVF + D K E AL AQLR++D + K+ ++EP+ + SV A ++ + W E GLG G++AVV+L GGQGTRLG PKGMYDIGLPSG+TLF+LQAERL ++ A++ + +A+ G A R+PWYIMTSP AAT ++F N+FFG+ DV FF Q
Sbjct: 12 LRARYEAAGQGHVFAHWD----KCDEGERDALAAQLRSVDLDHVKKIF-------DRSIADHDAGAAAKGEIEPVVADASVLKASAEDLSEWREAGLGVASLGELAVVLLAGGQGTRLGSSAPKGMYDIGLPSGRTLFRLQAERLAKLMAMS--SEEANQG---------APVRVPWYIMTSPHTHAATEKYFHDNEFFGLDSADVTFFQQ 200
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A3N2PYE0_9PEZI (UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2PYE0_9PEZI) HSP 1 Score: 148 bits (373), Expect = 4.960e-38 Identity = 84/215 (39.07%), Postives = 121/215 (56.28%), Query Frame = 1
Query: 88 ADLRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEPI--ESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
ADL+A + A GQDHVF + DS +E ++L QL DPAR+N++ T A D+EP+ + S+ + P++ W++ GL + K VV++ GGQGTRLG PKG YDIGLPS K+LF++QAER+R++ LAA + AA+ + P +PWY+MTS T ++F N++FG+ K DVF F Q
Sbjct: 26 ADLKAKYTAAGQDHVFTFYDS----LSPEEQASLYNQLLGFDPARINEI---TDRALNPTKAKPRDLDRAQDDIEPLPESATASILDSKPEDLDTWYKAGLDLIAQNKAGVVLMAGGQGTRLGSSAPKGCYDIGLPSHKSLFRIQAERIRKIQELAAAH-----------AASDSKPVVPWYVMTSGPTRGPTEQYFEENNYFGLDKADVFIFEQ 222
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Match: A0A2S5B6T0_9BASI (Uncharacterized protein n=1 Tax=Rhodotorula taiwanensis TaxID=741276 RepID=A0A2S5B6T0_9BASI) HSP 1 Score: 147 bits (372), Expect = 5.680e-38 Identity = 91/213 (42.72%), Postives = 120/213 (56.34%), Query Frame = 1
Query: 94 LRATFAAHGQDHVFKYVDSGAVKAGSDEISALVAQLRTIDPARMNKLHLSTTEAAXXXXXXXXXXXXTAQDMEP--IESFGSVASAHPDESARWFETGLGAVKDGKVAVVVLCGGQGTRLGFDGPKGMYDIGLPSGKTLFQLQAERLRRVCALAAGNGDASGGGSNGAAAAVATPRIPWYIMTSPLNDAATREFFTSNDFFGVPKEDVFFFSQ 726
LR T+ A GQ HVF + D K ++E + L QL +IDP R+N +H S+ +A T +D+ P + GSV + DE+ W E GL A++DGKVAV+++ GGQGTRLG PKG YDI LPS K+LFQLQAER+RR+ +A A +PWY+MTS T +FF N FFG+ KE+V FF Q
Sbjct: 12 LRETYDAAGQGHVFAFWD----KLAANEQADLFRQLSSIDPERVNSVHKSSLQAEKEAATS------THEDITPPPADQSGSVIG-NEDEAKSWNEVGLKAIRDGKVAVLLMAGGQGTRLGSSAPKGCYDINLPSRKSLFQLQAERIRRLQTVAG-----------------ADKPVPWYVMTSGPTRKPTEQFFADNAFFGLDKENVVFFEQ 196 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18686.5873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18686.5873.1 >prot_Ecto-sp13_S_contig18686.5873.1 ID=prot_Ecto-sp13_S_contig18686.5873.1|Name=mRNA_Ecto-sp13_S_contig18686.5873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp MGDFVAKSMAAEATEAGGGGGGGGGGGVPADLRATFAAHGQDHVFKYVDSback to top mRNA from alignment at Ecto-sp13_S_contig18686:2224..3206+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18686.5873.1 ID=mRNA_Ecto-sp13_S_contig18686.5873.1|Name=mRNA_Ecto-sp13_S_contig18686.5873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=983bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18686:2224..3206+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18686:2224..3206+ >mRNA_Ecto-sp13_S_contig18686.5873.1 ID=mRNA_Ecto-sp13_S_contig18686.5873.1|Name=mRNA_Ecto-sp13_S_contig18686.5873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18686:2224..3206+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |