mRNA_Ecto-sp13_S_contig18606.5829.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A6H5KRG7_9PHAE (GP-PDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRG7_9PHAE) HSP 1 Score: 823 bits (2125), Expect = 4.770e-297 Identity = 445/476 (93.49%), Postives = 449/476 (94.33%), Query Frame = 1
Query: 1 VEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHESNRRLRPQASQTDAATFPFPQGPDAYSGVDLRGLAAPASSRGKAVESTAAAGXXXDKDSHGNXXXXTASMSGSDGGNRSXXXXXXXXXXXXXXXXNKAEDSTDATVLGGWYSRCDTCKESAEGSDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSKEAETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMSHLTKSMKRDEVLPMLPFEKAFVKDLLGMVFS 1428
VEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEE+GEWIENLTLAQTRERLKHNVSTFEEMLQEK LSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNA+RQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYP LVHESNRRLRPQASQTDAATFPFPQGP AYSGVDLRGLAAPASS GKAV STA DS GN TASMSGS XXXXXXXXXXXXXX NKAEDSTDATVLGGWYSRCDTC+ESAEGSDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSKEAETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMS LT+SMKRDEVLPMLPFEKAFVKDLLGMVFS
Sbjct: 129 VEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKVLSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAYRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPGLVHESNRRLRPQASQTDAATFPFPQGPGAYSGVDLRGLAAPASSEGKAVGSTAL-------DSDGNNSSSTASMSGSXXXXXXXXXXXXXXXXXXXXTTNKAEDSTDATVLGGWYSRCDTCEESAEGSDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSKEAETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMSQLTRSMKRDEVLPMLPFEKAFVKDLLGMVFS 597
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A835YQF6_9STRA (PLC-like phosphodiesterase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF6_9STRA) HSP 1 Score: 259 bits (663), Expect = 2.490e-79 Identity = 124/240 (51.67%), Postives = 168/240 (70.00%), Query Frame = 1
Query: 1 VEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHESNRRLRPQASQTDAATFPFPQG 720
V+GNT+ SF AV LGVD+IEFDV+ +DG+ +CHHDPL E +G+W +++T+A+ R L T +EML ++ L +SGVHLY D+KHT IVRP + +++ AV R GW A R VVATF+Q++LL++NAFRQAIPEL LRTA I+D PL+LARDF+AL +S G+ V P+ VADC RRG+++W WTVN ++ L ++G+DG+CTDYPELVH + T P P G
Sbjct: 111 VKGNTLDSFHRAVELGVDMIEFDVVACADGI-LCHHDPLHEASGKWYQDMTIAKVRSLLGRPHPTLDEMLADRRLRDSGVHLYFDLKHTNIVRPTMRSIVAAVTRGGWHASRFVVATFKQVELLEINAFRQAIPELRGLRTAAILDAIPLSLARDFEALGCCAVSVGQYCVCPEFVADCHRRGLEMWAWTVNHKSMVDELFRLGIDGICTDYPELVHAAAAXXXXXXXXXXXXTPPHPAG 349
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A4D9D615_9STRA (GP-PDE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D615_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.080e-40 Identity = 93/215 (43.26%), Postives = 129/215 (60.00%), Query Frame = 1
Query: 1 VEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPE-LANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPE 642
V+GN++ SF AV LG D+IE DV G VI HHD + + G +ENL LAQ + R+ V +L + L SGV LY+D+K +V P++ + +A+ + GW RL+VA+F Q D+++VNA R A P LA L+T I+DG P++ A+++ AL V S G V P + D RRGI V VWTVN+ M R +GVD L TD+PE
Sbjct: 162 VKGNSLASFQRAVALGADMIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIK-RVDPAVEPLSRVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNASAMRRYADLGVDALVTDFPE 372
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: W7T4I9_9STRA (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4I9_9STRA) HSP 1 Score: 123 bits (308), Expect = 4.300e-29 Identity = 73/176 (41.48%), Postives = 104/176 (59.09%), Query Frame = 1
Query: 55 VIEFDVLTTSDGVVICHHDPLIEETGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPE-LANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNS 579
+IE DV G VI HHD + + G +ENL LAQ + R+ V +L + L SGV LY+D+K +V P++ + +A+ + GW RL+VA+F Q D+++VNA R A P LA L+T I+DG P++ A+++ AL V S G V P + D RRGI V VWTVN+
Sbjct: 1 MIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIK-RVDPAVEPLARVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNN 172
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A2E0JIA8_9FLAO (Glycerophosphodiester phosphodiesterase n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A2E0JIA8_9FLAO) HSP 1 Score: 102 bits (255), Expect = 3.320e-21 Identity = 66/221 (29.86%), Postives = 119/221 (53.85%), Query Frame = 1
Query: 10 NTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEE---TGEWIENLTLAQTRERL---KHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHE 654
NT+PS +A+ LGVD IE DV G ++ HD +E + +IE+L L + + K+ + T EE+LQ L + V L I++K P + + Q ++ GWT D+ ++++F+ +L ++ IP +A L + I L A+ KA+ ++ + + + + Q G++V+ +T+N L +ER++K+GVD + TDYPE +++
Sbjct: 38 NTIPSINKAMELGVDGIEIDVFKCKSGELVVFHDERLERLTNSSGFIESLELDSIKNIIVLDKYRIPTLEEVLQ---LIDGQVKLNIELKGYGTASPTNYLINQYNNKGGWTEDKFIISSFKWDELEKIRELNMTIP-IAVLVNSNINPIDALPFAKKIKAIAINPYFKDLNQKNIEKI---QSTGLKVFPYTINELDDIERMIKLGVDAIITDYPERINK 251
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A7V2GE01_9DELT (Glycerophosphodiester phosphodiesterase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V2GE01_9DELT) HSP 1 Score: 94.0 bits (232), Expect = 4.150e-18 Identity = 64/223 (28.70%), Postives = 107/223 (47.98%), Query Frame = 1
Query: 10 NTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETG----------EWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELV 648
NT+ + +A+ +GVD IE DV D +++ H D L T E++ +L A +R+ TF+ L L I++K T P + + + GW D +V++F L+ V A+ RT ++ G PL AR + LK D + D ++ V D RG+ V+V+T+N+ ++R++ MGVDG+ T++PE+V
Sbjct: 19 NTLIAMEKAISMGVDWIELDVRVVDDELIVIHDDRLERTTNGAGCVHEHSLEYLRSLD-AGKGQRIPLLRETFD-------LINKRAGLNIELKGTGTAGPTVELIRHYIRNRGWKYDEFIVSSFDHHALVTVKQIDPAV------RTGALVVGIPLGYARFAQELKADSVHCSLDFINDAFVHDAHARGLNVYVFTINNREDLDRVVTMGVDGVFTNFPEIV 227
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A7V9Q884_9BACT (Glycerophosphodiester phosphodiesterase n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7V9Q884_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 3.050e-17 Identity = 75/254 (29.53%), Postives = 112/254 (44.09%), Query Frame = 1
Query: 10 NTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGEWIENLTLAQTRERLKHNVSTFEEM----------------------------LQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRT-----------ACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHE 654
NTM +F AV +GVDV+E DV +TSD +++ HDP +E T T + N TF E+ L E + V I+ K T+ P L A + + R DR++V +FR L + FR+A PE+A + A ++G A+ AL+V + G ++P V RR ++V WT+N + M+RL GVDG+ TDYP+ + E
Sbjct: 55 NTMHAFTRAVEMGVDVLEMDVHSTSDSMIVVIHDPTVERT-----------TNGQGSVNAMTFSELKTLDAAYGWTPDGGASFPLRGQGITVPSLSEVLTAFPNVRFNIEPKQTQ---PSLAAPLCRMLRENKVTDRVMVGSFRSAVL---DEFRRACPEVATSASTSEVSAFLALSAASLEGNYSGAAQ---ALQVPEYTAGLRVITPGFVEAAHRRDLEVHAWTINEMESMKRLFDFGVDGIITDYPDRLIE 288
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A6I1ZWH5_9BACT (GP-PDE domain-containing protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A6I1ZWH5_9BACT) HSP 1 Score: 91.7 bits (226), Expect = 7.270e-17 Identity = 77/236 (32.63%), Postives = 119/236 (50.42%), Query Frame = 1
Query: 1 VEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGE---WIENLTLAQTRE-RLKHN---------VSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDF--KALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHESNR 663
V NT+P+F EA + GVD +E DV+ T+DGV+I HD +EE E ++ L A + H + E++L K L E V + I++K P + A+ R + R +V++F L LL+V R+ PELA + P L R + + D+L +P+ V RRG++V VWTVN+ ++ L +GVDG+ TD+PELV +++R
Sbjct: 78 VPENTLPAFQEAFKAGVDCVELDVMETADGVLIVKHDYHLEEDTEGNGYVWELPYAAIADLNAAHRWGGKFPPTRIPRLEDIL--KVLPED-VFINIELKIRRWFNPGFEEKVIAMIRQYYLVKRTIVSSFSPLSLLKV---RRLEPELA-IGYIWRDTHVPWYLRRPYFVNLVHPDVLHPHVIVTTPETVDKTHRRGMKVNVWTVNNRPMIQYLKSIGVDGIFTDFPELVLQADR 306
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: X0Y7X1_9ZZZZ (GP-PDE domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0Y7X1_9ZZZZ) HSP 1 Score: 89.0 bits (219), Expect = 1.760e-16 Identity = 73/233 (31.33%), Postives = 118/233 (50.64%), Query Frame = 1
Query: 10 NTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGE---WIENLTLAQTRE-RLKHN---------VSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDF--KALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHESNR 663
NT+P+F EA + GVD +E DV+ T+DGV+I H+ +EE E ++ L A + H + E++L K L E V + I++K P + A+ R + R +V++F L LL+V R+ PELA + P L R + + D+ +P++V RRG++V VWTVN+ ++ L +GVDG+ TD+P+LV +++R
Sbjct: 8 NTLPAFQEAFKAGVDCVELDVMETADGVLIVRHNYHLEEDTEGNGYVWELPYAAIADLNAAHRWGGKFSPTRIPRLEDIL--KVLPED-VFINIELKTRRWFNPGFEEQVIAMIRQHYLVKRTIVSSFNPLSLLKV---RRLEPELA-IGYIWRDTHVPWYLRRPYFVNLVHPDVFHPHVVVTTPEIVDKVHRRGMKVNVWTVNNRPMIQYLESIGVDGIFTDFPQLVLQADR 233
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Match: A0A7W7CFE3_9PSEU (Glycerophosphoryl diester phosphodiesterase n=3 Tax=Crossiella TaxID=130795 RepID=A0A7W7CFE3_9PSEU) HSP 1 Score: 89.0 bits (219), Expect = 3.090e-16 Identity = 75/230 (32.61%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 10 NTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGEWIENL------TLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANL---RTACIMDGG----PLTLARDFKALKVDI-LSTGK-DHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHE 654
N++ F AV+ G +E DV TSDGVV+ HHD L++ T + + + ++ Q + ++ E++L+E L E+ +L +D+K V PVL ++Q + W DR+ +A+F + L ++ R A P L R+A ++ G PL + K + S GK V VA R GI+V VWT+++ M LL +GVDGL TD P+L+ E
Sbjct: 36 NSLSGFRRAVKEGFSYLETDVHATSDGVVVVHHDDLLDRTTDGVGAVADQLWASVKQAKVGGVEPIARLEDLLEE--LPEA--YLNVDVKSDSAVAPVLR-LLQRLGAW----DRVCLASFSERRLARLR--RLAGPRLMTALGPRSAGVLWAGGRFRPLAVKSLVKGRLAQVPASAGKLKVVDHRFVAAAHRLGIEVHVWTIDTTEEMTALLDVGVDGLVTDRPDLLRE 254 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18606.5829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18606.5829.1 >prot_Ecto-sp13_S_contig18606.5829.1 ID=prot_Ecto-sp13_S_contig18606.5829.1|Name=mRNA_Ecto-sp13_S_contig18606.5829.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=472bp MPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEETGEWIENLTLAQTback to top mRNA from alignment at Ecto-sp13_S_contig18606:2..2894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18606.5829.1 ID=mRNA_Ecto-sp13_S_contig18606.5829.1|Name=mRNA_Ecto-sp13_S_contig18606.5829.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2893bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18606:2..2894+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18606:2..2894+ >mRNA_Ecto-sp13_S_contig18606.5829.1 ID=mRNA_Ecto-sp13_S_contig18606.5829.1|Name=mRNA_Ecto-sp13_S_contig18606.5829.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1416bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18606:2..2894+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |