mRNA_Ecto-sp13_S_contig1856.5804.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1856.5804.1
Unique NamemRNA_Ecto-sp13_S_contig1856.5804.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: D7FPU8_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPU8_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 9.340e-144
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 1 
Query:    1 MKMEIGALALTLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            MKMEIGALALTLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQT IEQL SGH+SPFGDGQGAF
Sbjct:    1 MKMEIGALALTLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTAIEQLTSGHLSPFGDGQGAF 216
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: A0A835ZQ88_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ88_9STRA)

HSP 1 Score: 267 bits (683), Expect = 4.280e-82
Identity = 136/206 (66.02%), Postives = 169/206 (82.04%), Query Frame = 1 
Query:   31 TLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            +LA   AF AP AF G+++A P+ ++ A ++ M+VND+LGADVET GV+DPLG+ KD+A+LFRRR VELKHGR+ MLA  GYL AE +HPLYDGK+  GL A+ ++P+A W+QI+ AI VVELTVGKQD+ENKAPG+LG FG  +NP+P++P  F+ LQLKELKNGRLAM+ IMG MVQE LTGQT + QLASGHISPFGDGQGAF
Sbjct:   11 SLAGAAAF-AP-AFMGAKVAAPRVSSKAVVS-MSVNDLLGADVETKGVWDPLGFSKDEAALFRRRVVELKHGRICMLATLGYLVAEVYHPLYDGKIPAGLGAISQVPMAGWLQIIAAIGVVELTVGKQDFENKAPGDLG-FGLGFNPFPNDPEKFAALQLKELKNGRLAMMGIMGMMVQEGLTGQTPLAQLASGHISPFGDGQGAF 212
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: A0A0G4EVU7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EVU7_VITBC)

HSP 1 Score: 255 bits (652), Expect = 1.480e-77
Identity = 128/214 (59.81%), Postives = 162/214 (75.70%), Query Frame = 1 
Query:    7 MEIGALALTLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            M++   A  +A  +AFV  +   G       Q+   T  +MAV DM+GADVET GV+DPLG+ KD++SL+R RAVELKHGRVAMLAV GY  AE WHPLYDGK+ PGLKA+ ++P A W+QIL  IA +EL++GKQD+EN+APG+LG FG   NP+ ++PV F+KLQLKE+KNGRLAM+AI G +VQE +TGQT ++QL  GHISPFGDGQG F
Sbjct:    2 MKLMVFAALIAAASAFVPSAPLRGLD---KLQSRDRTAPRMAVEDMIGADVETRGVWDPLGFSKDESSLYRYRAVELKHGRVAMLAVLGYFVAELWHPLYDGKVEPGLKAISQVPSAGWLQILATIAAIELSIGKQDFENRAPGDLG-FGI--NPFENDPVEFAKLQLKEIKNGRLAMIAIAGMLVQELVTGQTTLQQLREGHISPFGDGQGLF 209
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: W7TFG9_9STRA (Light harvesting complex protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFG9_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.280e-74
Identity = 126/206 (61.17%), Postives = 160/206 (77.67%), Query Frame = 1 
Query:   31 TLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            +LA  +AFV P+A        P+ + +  MT+MAVND+LG+DVET GV+DPL + KD+ SL+R RAVELKHGR+AMLAV G   +E +HPLYDGK+SPG+KA+GELP  AW+QIL  I V+ELTVGKQD ENKAPG+LG FG  +NP+ ++P  F++LQLKELKNGRLAML   G ++QE +TGQT  EQ+A+ H+SPFGDGQG F
Sbjct:   10 SLAVASAFV-PAA--------PKMSRTRGMTRMAVNDILGSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLG-FGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIAAQHLSPFGDGQGFF 205
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: A0A835ZAI4_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI4_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.800e-58
Identity = 122/212 (57.55%), Postives = 145/212 (68.40%), Query Frame = 1 
Query:   31 TLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPG------LKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            +LA   AF  PSAF G  +ARP   T A +T+M+V DM+G DVET G+FDPLG+ KD+ASLFRRRAVELKHGR+ MLA  G L     H L D   S        L+ L + P+AA +QIL AI ++ELT G QDY NKAPG+LG FG A+ P  D+    ++LQLKELKNGRLAM+ IMG +VQE LT Q  IEQL  GH SPFGDGQG F
Sbjct:   11 SLAGVAAFT-PSAFAGKALARPAARTHA-VTRMSVEDMVGIDVETGGLFDPLGFSKDEASLFRRRAVELKHGRICMLATFGVLVQTYVH-LPDAVFSNPRPIGALLQVLDQRPVAA-IQILLAIGLLELTAGAQDYANKAPGDLGRFGDAFKP--DDAGELAELQLKELKNGRLAMMGIMGMLVQEGLTKQGPIEQLLVGHTSPFGDGQGFF 216
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: W7U405_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U405_9STRA)

HSP 1 Score: 192 bits (489), Expect = 8.550e-54
Identity = 119/223 (53.36%), Postives = 147/223 (65.92%), Query Frame = 1 
Query:    1 MKMEIGALALTLATTTAFV--APSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPG-LKALGEL----PLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            MK     LAL L  +TAF+  AP    G  +            +MAVN+M+G+DVET+GVFDPLG  KD+ASL+R R +ELKHGRVAMLA  G L    +H   +   +P  L AL ++    P+A W QI  AI  +ELT+GKQD  N+APG++G FG A+   PD+   F+ LQLKELKNGRLAM+AI+G+ VQEKLTGQ  IEQL  GH SPFGDGQGAF
Sbjct:    1 MKTAFAFLAL-LGVSTAFMPTAPRMTRGRSV------------RMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDEVFSNPRPLAALAQVYSERPVAFW-QIFLAIGAIELTIGKQDTANRAPGDVG-FGAAF--IPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPFGDGQGAF 206
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: A0A7R9U311_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U311_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.170e-52
Identity = 94/170 (55.29%), Postives = 131/170 (77.06%), Query Frame = 1 
Query:  130 AVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQ-WHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDG 636
            AV+ ++GADVET+G +DPLG  K++ +L RRR VELKHGRVAMLAV G +  +  +HPL+DGK+  G+ A+ ++P A WVQIL AIA +EL  G  D E+K PG++  FG A+   P++PV + KLQL+ELK+GRLAM+AI+GE+VQE++TGQTV++QL  G+++PF  G
Sbjct:   36 AVDALVGADVETNGFWDPLGLAKNEEALGRRRHVELKHGRVAMLAVLGNIVTDAGYHPLFDGKIPAGIGAISKVPTAGWVQILFAIAAIELRYGGYD-ESKTPGDIAGFGSAF--IPEDPVEYEKLQLRELKHGRLAMIAILGELVQEQITGQTVLQQLVEGNVNPFTPG 202
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: A0A835ZIK7_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK7_9STRA)

HSP 1 Score: 184 bits (466), Expect = 9.750e-51
Identity = 102/190 (53.68%), Postives = 128/190 (67.37%), Query Frame = 1 
Query:   94 PQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWH---PLYDGK--LSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            P ++ +A +T+MAV DMLGAD+ET GV+DPL   KDD +LF+ R VELKHGRVAMLA  G L     H   P++     L+   + L E P+A W QI  A+   EL++GKQDYENKAPG++  FG    P  ++   + K+QL+ELKNGRLAM+A +G  VQE LTGQ  IEQL  GHISPFGDG G F
Sbjct:    2 PLRSAAAAVTRMAVQDMLGADIETSGVWDPLRLSKDDGNLFKYREVELKHGRVAMLATLGVLVQSFNHLPDPVFSNPRPLAALSQILAERPVAFW-QIFLAVGAFELSIGKQDYENKAPGDIATFGDFVKPSDEDE--WEKIQLRELKNGRLAMVASIGMFVQEALTGQGPIEQLQVGHISPFGDGSGFF 188
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: A0A835ZDP1_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP1_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.130e-50
Identity = 116/222 (52.25%), Postives = 144/222 (64.86%), Query Frame = 1 
Query:    1 MKMEIGALALTLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLK---ALGELPLA---AWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPFGDGQGAF 648
            M+  I  L   +A  +AFVAPS+F GS +     +TS+T  KM+V++++GAD ET GV+DP G+ KDDA+L++ R VELKHGRVAMLA  G L  + +  L D   + G K   A  EL  +   A  QI  A   +EL V KQD E  A G+LG FG     YPD    F  LQLKELKNGRLAM+AI+G  VQEKLTGQ  IEQ+ +GH+SPFGDGQGAF
Sbjct:    1 MQTTIAVLLACVAGASAFVAPSSFAGSAL--KVASTSSTSLKMSVDELIGADTETSGVWDPAGFAKDDAALYKYREVELKHGRVAMLATLGVL-VQSFVTLPDPVFANGAKPQTAAWELVTSRPEALAQIFLACGAIELLVLKQDPEKPA-GDLG-FGA----YPDTEEEFETLQLKELKNGRLAMMAIVGMFVQEKLTGQGPIEQILAGHVSPFGDGQGAF 213
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BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Match: A0A0G4GDB0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDB0_VITBC)

HSP 1 Score: 181 bits (460), Expect = 1.580e-49
Identity = 113/216 (52.31%), Postives = 140/216 (64.81%), Query Frame = 1 
Query:    7 MEIGALALTLATTTAFVAPSAFHGSQIARP---QQATSATMTKMAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDG------KLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQLASGHISPF 627
            M+  A+A  L    A+   +AF  S   R    ++A  +T  KM+V +M+GADVET GVFDPL + +D+ASLFRRRAVELKHGR+AMLA  GY        L D        LS   K L E P AA  QI+ AIA +EL  G+QDYENKAPG+LG FG ++     +P  F K QL+ELKNGRLAM+ IMG MVQE LTGQ+V EQ+ SG+I+PF
Sbjct:    1 MKCVAVASLLLIAVAYGEEAAFVPSAPLRSLPTRRALRSTTPKMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDPVFSEPRPLSALTKVLTERPWAA-AQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKN--SDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPF 213
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1856.5804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPU8_ECTSI9.340e-14498.61Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835ZQ88_9STRA4.280e-8266.02Light harvesting complex protein n=2 Tax=Tribonema... [more]
A0A0G4EVU7_VITBC1.480e-7759.81Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
W7TFG9_9STRA2.280e-7461.17Light harvesting complex protein n=2 Tax=Monodopsi... [more]
A0A835ZAI4_9STRA2.800e-5857.55Light harvesting complex protein n=1 Tax=Tribonema... [more]
W7U405_9STRA8.550e-5453.36Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A7R9U311_9STRA1.170e-5255.29Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZIK7_9STRA9.750e-5153.68Chlorophyll a/b-binding protein domain-containing ... [more]
A0A835ZDP1_9STRA2.130e-5052.25Light harvesting complex protein n=2 Tax=Tribonema... [more]
A0A0G4GDB0_VITBC1.580e-4952.31Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1856contigEcto-sp13_S_contig1856:7225..12329 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score425.2
Seed ortholog evalue1.8e-116
Seed eggNOG ortholog2880.D7FPU8
Model size2001
KEGG koko:K08907
KEGG Pathwayko00196,map00196
Hectar predicted targeting categorychloroplast
Exons5
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S44M@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-18_001740.1
Cds size651
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1856.5804.1prot_Ecto-sp13_S_contig1856.5804.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1856 8575..12329 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462952.704056-UTR-Ecto-sp13_S_contig1856:7224..85741681462952.704056-UTR-Ecto-sp13_S_contig1856:7224..8574Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1856 7225..8574 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462952.718082-CDS-Ecto-sp13_S_contig1856:8574..86721681462952.718082-CDS-Ecto-sp13_S_contig1856:8574..8672Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1856 8575..8672 -
1681462952.7264771-CDS-Ecto-sp13_S_contig1856:9660..97841681462952.7264771-CDS-Ecto-sp13_S_contig1856:9660..9784Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1856 9661..9784 -
1681462952.7350297-CDS-Ecto-sp13_S_contig1856:10164..102911681462952.7350297-CDS-Ecto-sp13_S_contig1856:10164..10291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1856 10165..10291 -
1681462952.743572-CDS-Ecto-sp13_S_contig1856:11230..114201681462952.743572-CDS-Ecto-sp13_S_contig1856:11230..11420Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1856 11231..11420 -
1681462952.751884-CDS-Ecto-sp13_S_contig1856:12217..123291681462952.751884-CDS-Ecto-sp13_S_contig1856:12217..12329Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1856 12218..12329 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1856.5804.1

>prot_Ecto-sp13_S_contig1856.5804.1 ID=prot_Ecto-sp13_S_contig1856.5804.1|Name=mRNA_Ecto-sp13_S_contig1856.5804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
MKMEIGALALTLATTTAFVAPSAFHGSQIARPQQATSATMTKMAVNDMLG
ADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHP
LYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGN
FGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTVIEQ
LASGHISPFGDGQGAF*
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mRNA from alignment at Ecto-sp13_S_contig1856:7225..12329-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1856.5804.1 ID=mRNA_Ecto-sp13_S_contig1856.5804.1|Name=mRNA_Ecto-sp13_S_contig1856.5804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5105bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1856:7225..12329- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATGGAGATCGGTGCTTTGGCTCTTACCCTCGCGACCACGACGGC
GTTCGTGGCGCCATCCGCATTCCACGGTTCTCAAATCGCGCGGCCGCAGC
AGGCGACATCTGGTGAGCCTCTCTTTCCAACTCACAGCGGCATCGCATAC
AAGTGTTGTCCTAGGAGCGGTTGTGTCATGTTTCGCGGTCTCGCGATGCC
GGTTTCCAAGTGCCCTCGTGCGCGCTCGTCGGACTGGGAGTTTTTATGTT
GCTCCTGTTAGTGCTGCTGTAGTGTGAAGACTGAAGACGAGCTGCCGTTG
GTCCCAAGGGGTGTGTACGTGGTGAAACATGCCTCTCTGACCTCTGACTC
AAGTTGACTGCTGTTGGATCATGAAGACAATCAACAAATACCCCCAGATG
CGGAATCAAGAGATCAGGTTGTTGACCTTTTGTACGATCGTAGCCTACGT
CAATCGGCTGTTTCTTCTCTCTGCGGTTGGAAGTCCGTGCATGAGAAACA
TCTGAACCTGTGAGATTTGGCGTCACCAACGAGTCCCGTGAAAACCAAGA
AATCACTCATCTGCACACACCTGAGGGTCCCCATTCCCCGCTGACTCGAC
CCTCGTCTCGTCTCGTGTATCTCTGGTTCCCTCTCTTCTCTCATCTCTTT
CGCTGTGTAGAATCATCCTCGGTTTCGTTGAACGCTGATTACCACGAACT
CGTTCGTGCCCCCGTCGGGGATTGGCATTGTTCAGTCCTTCCTAATACTT
GTGTATTTCGTACATACAGAGAGGTGAATCGATTGATCGCATGCAGATGA
AAAATCCATCAGTTGAACTGAATCGTTCTTTGCCTGACAACAACGGGTGT
TGCCCGATGCATCCATGCACTCATGTATGCGTGTCCGCGAAATCAACGAC
ATCATCCAGCCACCATGACCAAGATGGCGGTGAACGACATGCTGGGCGCG
GATGTGGAGACGGACGGTGTGTTTGACCCCCTCGGGTACGGCAAGGACGA
TGCATCGCTCTTCAGGCGCCGGGCGGTGGAGCTCAAGCACGGACGTGTCG
CTATGTTGGCCGTCACCGGCTACCTCTTCGCCGAGCAGTGGCACCCCCTG
TGAGTTAGTGGTACAAGACAGCAGTGGTTTGGCCACTCTACCCAGGCTCA
TTTGGTGGACTTGGGGGAGACTGGAAGCAGCAAGACGATCACGACGATAC
GAATCCAAGACTCGTGTGTTCACACATGATGGGCTTTCATTACGTCGTGA
AGGAATGGTGTGGGTGGTGCTGTGTACTCACCAGGTGTTGTGCTATTTTA
CCCTTTCTGTCTCTAGTGACATTGTCTCCGTCAACATTGGCTGCCTCGAA
AGTCGGCCAAGATTGCCTTGTGTGTGCATGAAGAGCCTCGCTGGTGGTTC
GGTTATAGTGGCAGAGGCAATTTTAGTAATTTGGCCGATAATATGCTCGT
GCCGAAGAGAAACATGATCACCGCACTTACTGCTGTTGGTGCCGAGGTCG
AACGTACCCTCAAGTACTGCGCGACCATGTGAAAGTGCGCACATGTCTAA
TCTAGCAAGAGGTTCTCGTCCGCCAATGAGGAACGTACCGGCCGCTCGGC
CTTTCCGTTCTACTGTTTCAATCGCCCATCGCCCGGTCAGGGCAGCTGTG
AAAGTCAGAATAGCAGCGAACGTTTGCCATTCCTTTCCTGTTGTGTTGCC
CTGCTAACGTTGTCGCATACGCATCTCTCGCCACCGTGTGCTTCAGTATT
TTTTCATGTTCGTTTTCTAGTACCAAACACCCCTCGCTTTTCGGCTACAG
CAGTGCATTCGACACCGTGGGCAAGAGAGCCTCACCCCGAAGCACGCTCT
CGGTTTTGCGCTTTATCATCAACACGGCCATGCGCTTTACATATCTTACC
GAACGGTATCGTCGGTGCACGTGAACAAATCGTTCTTGAGGGCGTAGGAC
ACACAATTCAATCCGCATGTGGCAGGTATCCTGATTTTATTATTCACGTT
TTCGCTCTCCTCTCCCTCCCCTACCACTGTCTTGTCAGGTACGACGGTAA
GCTGTCCCCGGGTTTGAAGGCCCTCGGAGAGCTCCCGTTGGCAGCGTGGG
TTCAGATTTTGGGAGCGATCGCCGTCGTGGAGCTGACTGTGGGGAAGCAG
GACTACGAGAACAAGGTGCACTTGGTTTGCGGAGGGTGTTGATGTTGCTG
CTGGTGTTCTGATATTTTCCTGTTGCACTGCACAAGTCTTACCGCATGCG
TGGTGATTTGGCAAGTGTAACGGACAACTTTGATCCGAACACCTTTGAAA
GCGACCAACTGCTTACCCTCTTTTGTAATTGTTTTGTTCCATGCTGGTCA
ATTTGAGAGGGTTGTTAGTGGTCTAGTCGACAACCCCGGACGCGATTTCA
CTGCAGGGTTGGACACGTCCACGACGTTTCTCTATGTCACCAATTACGCT
CACACAGGGCATCCGCAGGTGTGATGGTGAACGTGCCGCGTACTAACTTC
CTTTTCCCGTGTCTTGTGCGACATTCCTGTTGTCTGCTTTCGTAGGCGCC
GGGAGAGCTCGGCAACTTCGGCCAGGCATGGAACCCCTACCCCGACAACC
CGGTCGCTTTCTCCAAGCTTCAGCTCAAGGAGCTCAAGAACGGGCGCCTT
GCGATGCTTGCAATCATGGGTAAGTTCTTGAGGCCGTCATCATCTTTCTT
GTTCTGTGGCTGTCACTCGCTCACGTTACAACGGGTGTCAATCGTCGACA
AGACGACCTGCTTTGTTCGCATTCCTGCGAAAGTATCTGCTGGACGTCAT
GTGCACATGGTCGCGAGACTAGCAGACGAGTCCACATTGTCGAAAACCGG
GAACATTCAACGTTGGCCGTTTGAAAGTTGACCGTGGGGCGCGCGTTGGG
TCCGAACGACGAAGCGTTACAAACGTGAGCAATTATTGCCGAGTTTACGC
AGGAAGAGATCGCCTCGCTTGAGTAACTCCAGTAACGATTATGTTTCCGC
GACCAGACAGACGTGCATGGGGAACTGAGGCCGAAACTGCGCGTCTGTTT
TCTTGCGTGTGGAAAGTTTATAGCCTTCCCAATCTTGTGGCGGGCTGTGC
GTGCAGCACGCGCTGCGGTCGTAGAGTGTGTCGTCGAGCAACACGACGCC
ACCTGCGTCATAGCGAATTCTCCGAAGCTGTTGTGGAACTTGCCTCCTAA
ACACCAACACTTAGACTTTGATATTCGTGAGGCGTTGACGTGATTCCAAC
AGTTGTTCTCGGGTTATCGTGTCATGCTGTAACATCATGCATGTTGTCCA
TGTCTCGAAGGGTCGTGTCTATACATGTAAATGCGTAGCACTTCGCGATT
TTTCCCACAGGGGCAGCTTTTCTCTTCTCTCAAGCAGGCACCCCGTGCAC
GTTCGCAGCGTCATCAACACTAGGAAACACAAATCTTGTTTTGTCGTTGA
ACATTGCGTAGACGACCAGAGCTGTGAACGGTGGAGACCCAAGCTTTCGC
CAAAAAAATTGTGTGCCTGGCGCTCGCCACCTTGCTCGAAGTTTGTCCAC
AATGTGACACCCTTGAAGAAAAATCGGCCGTGCAAACACGACTGCGGGCT
ACTGATGGGCTGATTTCGTGTCATATTCTCTGTCGTCCTGTTTTTTCGGA
TTCTCAGGCGAGATGGTGCAGGAGAAGCTCACCGGCCAGACCGTAATCGA
ACAGCTCGCATCGGGACACATCAGCCCGTTCGGCGACGGCCAGGGCGCCT
TTTAAATTTTCTGCCGGCTGAACGTTTCTATCGTAGCGGCGGTGTGAAGA
TGCCCTGTTTCGCGTGATGAAAGCCGATTTAGCCGTCGTTTTTGTCCAGC
CGTTCCCAGGGGAAAGACGAGGCGTGCAGTCGAACCATTTGCCTGACTGA
GCGAAAAGTCGAGAAGCGAAATGCACTTAACAGGCATGCACGCGAGGGTT
TACGGGCGAGAAATCAGCGTCTTGTCGCTGGCGTTTTGTCCCAGCCAAGA
GGTGTTCGTGCGGGCTACTCGCACTCTCTCGCGTAAGGGCGTGGTGGTCA
CATGTGTGACGGACACAGCCAATACTGCGTAATCGCGTCAGAACGATCGC
CTCTTTTCCTGATTTTCTTTCTTTTTTGTGCTGTGTTGGGGGAAAGGTGT
GGGCAAGCGGGTTAGATAGATTTGTCCCGAGTCTGCAGTTGACATGAACA
ATTTTGTTCGTCGCGTCTGCTGTCTTGTTAAGGCGGTCGAGGAGTGGTGC
TCACCCTCGCTGCTAAAATTCACACGCCTGTGGTAACCGCTTGTTGGTGT
CATGTTGCCAAGGTTGATGGGTCACCCCCCAGCTAATCCCTTTTAGGGTC
GCAGGCCGAGTAAAAGTGTTGTGTCTTTCCATTGATTTCACGCCAACCTC
CATCCCAAGTGATCAAAACGCCTACGCGTGTCCTTGACCGGGGAACAGGT
GTCTCATCCTCCTTGTGACAGCCCGTCCGCCGGCTTGGCTCTCGTTGGTG
TTCCTTTTGATCAAGCGGCCGGAGATGATGTCTAAACCTATGATCAATCA
CATGATGTCGTATCCGTAGTTCAGGGCAAGGAACTCGTGCTGGCTGAGAG
TGGTCTGCTCCCTGTTCCCTCCCTAGAAGTGGACCACCGCTGTCTACGTG
CAACGGAAGAAACGCTCGGATGAACTCGCGTCCCTAGGAAAAAAAGTCGT
CCGACTCACGAGAGCAGGCAAGTGCCAACCGATGTAGTGCTGTTTGCCGT
GTCACACGGCGGCGGAACGTGCGCCTCTCCCCCCCTCCCGTCACACCATC
GAAGTACAAGGTCTGGTTTCGACATCAGCATGTCGTTGCCGGTAATGTGG
TGAAAACAACACAAAACTACAGTGCTCGACTAGCACAGCAGTAAGTCACG
GGTACGCATACGTGACTGAACCGTTCGTGTAGTAGCCCAATCCCTCTCAC
TCTCAAACCTACGGAACCTCGTCCTGCGATGGGCGTACTGTAGATTTCGT
ACAGCATGTAGTAGAATAGGAAGTGCGCTTATGTTGGGAGAGTGCTACAC
GCGCAAAAATTTATGGGTGTTCGGTAGAGCAACAACAAACACACGTTCGG
CAGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1856:7225..12329-

>mRNA_Ecto-sp13_S_contig1856.5804.1 ID=mRNA_Ecto-sp13_S_contig1856.5804.1|Name=mRNA_Ecto-sp13_S_contig1856.5804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=651bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1856:7225..12329- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATGGAGATCGGTGCTTTGGCTCTTACCCTCGCGACCACGACGGC
GTTCGTGGCGCCATCCGCATTCCACGGTTCTCAAATCGCGCGGCCGCAGC
AGGCGACATCTGCCACCATGACCAAGATGGCGGTGAACGACATGCTGGGC
GCGGATGTGGAGACGGACGGTGTGTTTGACCCCCTCGGGTACGGCAAGGA
CGATGCATCGCTCTTCAGGCGCCGGGCGGTGGAGCTCAAGCACGGACGTG
TCGCTATGTTGGCCGTCACCGGCTACCTCTTCGCCGAGCAGTGGCACCCC
CTGTACGACGGTAAGCTGTCCCCGGGTTTGAAGGCCCTCGGAGAGCTCCC
GTTGGCAGCGTGGGTTCAGATTTTGGGAGCGATCGCCGTCGTGGAGCTGA
CTGTGGGGAAGCAGGACTACGAGAACAAGGCGCCGGGAGAGCTCGGCAAC
TTCGGCCAGGCATGGAACCCCTACCCCGACAACCCGGTCGCTTTCTCCAA
GCTTCAGCTCAAGGAGCTCAAGAACGGGCGCCTTGCGATGCTTGCAATCA
TGGGCGAGATGGTGCAGGAGAAGCTCACCGGCCAGACCGTAATCGAACAG
CTCGCATCGGGACACATCAGCCCGTTCGGCGACGGCCAGGGCGCCTTTTA
A
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