mRNA_Ecto-sp13_S_contig18549.5796.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: D7G248_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G248_ECTSI) HSP 1 Score: 380 bits (976), Expect = 8.290e-125 Identity = 175/182 (96.15%), Postives = 179/182 (98.35%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREWCEPGKKDEQVAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGTPPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALE 547
+ +E+VIPL+RWVRE CEPGKKDEQVAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGTP GLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALE
Sbjct: 90 IATEQVIPLMRWVRECCEPGKKDEQVAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGTPSGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALE 271
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: A0A835ZEQ5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ5_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.180e-54 Identity = 92/186 (49.46%), Postives = 119/186 (63.98%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREWCEPGKKDEQVAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVH----MPIHCMDVYALGRLLERVYPEGTPPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALE 547
+ +EEV+PL W+ E GKKD+Q+AWGMHC+C+ALKFLHE CK HNN+ DT+FVT GGDWKLGGMDLLS L G D + + +Q P G +H +P+H D+++LGR+L+ YPEGTPP L +YV KM+ P +RPT SQYLRCAFL++ V+ L LE
Sbjct: 91 MATEEVVPLGDWLATRIEAGKKDDQIAWGMHCMCAALKFLHESCKQSHNNVCADTIFVTRGGDWKLGGMDLLSALDGSDNFLQIHQSIQVCAIGFV---------VCPERLQGSMHTLANLPLHIQDIWSLGRVLQVAYPEGTPPSLSKYVEKMMDARPERRPTPSQYLRCAFLKRPAVQHLQQLE 267
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: A0A7S3XIW8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XIW8_HETAK) HSP 1 Score: 103 bits (256), Expect = 5.880e-24 Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 2
Query: 8 SEEVIPLIRWVREWCEPGKKDEQVAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKDY--SIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVY 406
+E+V PL+ W E E +D+++ WG++CL +ALKFLHEDCK H+NI ++FVT+GGDWK+GGM LL + + + + P + E DW P L G P H DV+ G LE VY
Sbjct: 95 TEKVRPLLDWA-EGLEESTRDDEITWGLYCLFNALKFLHEDCKVSHSNIGAHSIFVTNGGDWKIGGMALLGDSTDQVHINHLIQAVNFVPTSMLAPEIAGKDW----PALRGA----PRHAPDVWGAGAALEAVY 220
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: B8C7X9_THAPS (Protein kinase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7X9_THAPS) HSP 1 Score: 85.1 bits (209), Expect = 5.950e-16 Identity = 60/192 (31.25%), Postives = 87/192 (45.31%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREWCEPGKKDEQVA--WGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKD-------YSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPE---GT----PPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVK 529
+V+E+ PL+ W+ + VA WG++ L AL FLH K H + + VFVT GGD+KLGG DL++PLG +D + + P ++S ER RY P+H +D Y+L L+E +Y GT P L + + +M P RP L+C VK
Sbjct: 146 IVTEQATPLVDWLENLNPLSSQANSVAVSWGIYNLVEALSFLHTQAKLAHGMMCPEAVFVTPGGDFKLGGFDLITPLGIEDGGGGPTPHFRTYEAAVCPDDYRSPERIGQ---RYDVLQQSA----PVHAIDCYSLAILIEYIYSHPNAGTNGQVPSPLKKALLRMKNDAPKLRPRLQPLLKCPVFDNPYVK 330
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: K0TA70_THAOC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TA70_THAOC) HSP 1 Score: 84.3 bits (207), Expect = 1.080e-15 Identity = 63/192 (32.81%), Postives = 87/192 (45.31%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREWCEPGKKDEQVA---WGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLG------GKDYSIAERRG-LQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPE------GTPPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVK 529
+V+E+ PL W+ E P A WG++ + AL FLH K H + + VFVT GD+KLGG DL++P+G G + G + P +F+S ER RY G PIH MD Y+L L+E VY G P L + + +M P RP + L+C VK
Sbjct: 206 IVTEKSTPLNDWL-ENLNPHTSQANAAAISWGVYNIVEALTFLHTQAKLAHGMLCPEAVFVTPSGDFKLGGFDLITPVGSDGAQTGPTPHFRQYEGAVCPAEFRSPERVGG---RYDLLQSGS----PIHAMDCYSLAVLIEYVYTHPNSGTSGVPTPLKKALLRMKNDSPKLRPRLAPLLKCPVFDNPYVK 389
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: A0A7J7IKN4_9RHOD (Protein kinase domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKN4_9RHOD) HSP 1 Score: 83.2 bits (204), Expect = 2.780e-15 Identity = 50/159 (31.45%), Postives = 82/159 (51.57%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREWCEPGKKD-EQVAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGTPPGLDRYVGKMLLPEPTKR 475
LV+E V+PL +R +P E + WG+ C+ AL F+H++ K H +S TVFVT+GGDWKLGG+++L+ ++S +R R Q A +W + +P+H +D +A G L+ ++ G D ++PEP ++
Sbjct: 105 LVTEAVVPLQFVIR--ADPISLSLEAIVWGLFCIARALHFIHQEMKSVHGRLSPATVFVTTGGDWKLGGLEVLT-----EHSHWQRL-RDGRTLQFAH-----YWPPEMHQSSESLSLPVHALDAWAFGCLMYDLFSHGQYHSTDELRRIEVIPEPLRQ 250
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: A0A7S2PSF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSF7_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 9.090e-15 Identity = 63/193 (32.64%), Postives = 88/193 (45.60%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREWCEPGKKDEQ---VAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKD-------YSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPE---GT----PPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVK 529
+V+E+ IPL W+ P V+WG++ + L FLH K H I D VFVT GGD+KLGG DL++PLG D + + P ++S ER + RY TL P+H +D Y+L L+E +Y GT P L + + +M P RP L+C VK
Sbjct: 138 IVTEKAIPLDDWLDN-LNPHTAQANAAAVSWGIYNIVEGLSFLHTQAKLAHGMICPDAVFVTPGGDFKLGGFDLVTPLGIADGGGGPTPHFRKYEASVCPADYRSPERTSG---RYD-TLQQSA---PVHSIDCYSLAVLIEYIYTHPSAGTNGQVPVPLKKALLRMKNDSPKLRPRLPPLLKCPVFDNPYVK 322
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: A0A3F2RNB7_9STRA (Protein kinase domain-containing protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNB7_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.100e-14 Identity = 53/201 (26.37%), Postives = 91/201 (45.27%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREW-CEPGKKDEQ----VAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPL--GGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGT------------PPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALE 547
+V+E ++PL ++ E G E+ V+WG+ + AL+F++ DCK H ++ ++FVT GGDWKLGG +L + + G Y + ++S E DW G P + +D +A L+ V+ +G PP + K + P +RP+ + L C++ +K + LE
Sbjct: 110 IVTEHIMPLSEFLTALRMEYGANSEEFSMCVSWGLRSVLLALQFINVDCKLMHGRLTPQSIFVTKGGDWKLGGFELTAEITSDGPSYIYTAFQQYADANYKSPECLRSDW---KAVATG-----PPYGVDTWAFACLMYYVFNDGQFQSSDVSTAANIPPAIQTQFRKAIDENPVRRPSPQKMLSCSYFDTAFIKRMDFLE 302
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: D0NJ18_PHYIT (N-terminal kinase-like protein n=19 Tax=Phytophthora TaxID=4783 RepID=D0NJ18_PHYIT) HSP 1 Score: 81.3 bits (199), Expect = 1.300e-14 Identity = 54/201 (26.87%), Postives = 91/201 (45.27%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREW-CEPGKKDEQ----VAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPL--GGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGT------------PPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALE 547
+V+E V+PL ++ E G E+ VAWG+ + AL+F++ DCK H ++ ++FVT GGDWKLGG +L + + G Y + ++S E DW G P + +D++A L+ V+ +G PP + K + +RP+ + L C++ +K + LE
Sbjct: 110 IVTEHVMPLSEFLTALRMEYGANSEEFTMCVAWGLRSILMALQFINVDCKLLHGRLTPQSIFVTKGGDWKLGGFELTAEITSDGPSYIYTAFQQYADVNYKSPECQRSDW---KAVATG-----PSYGVDIWAFACLMYYVFNDGQFRSSDVSTASNIPPAIRTQFRKAIDDNVARRPSPQKMLSCSYFDTPFIKRMDFLE 302
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Match: G4YT79_PHYSP (Protein kinase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YT79_PHYSP) HSP 1 Score: 80.9 bits (198), Expect = 1.780e-14 Identity = 54/201 (26.87%), Postives = 89/201 (44.28%), Query Frame = 2
Query: 2 LVSEEVIPLIRWVREW-CEPGKKDEQ----VAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPL--GGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGT------------PPGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALE 547
+V+E V+PL ++ E G E+ V+WG+ + AL+F+ DCK H ++ ++FVT GGDWKLGG +L + + G Y + ++S E DW G P H +D++A L+ V+ +G PP + K + +RP + L C++ +K + LE
Sbjct: 110 IVTEHVMPLSEFLTALRMEYGANSEEFTMCVSWGLRSILRALQFITVDCKLMHGRLTPQSIFVTKGGDWKLGGFELTAEVTSDGPSYIYTAFQQYADINYKSPECQRSDW---KAVATG-----PSHGVDIWAFACLMYYVFNDGQFRSSDVSTAANIPPAIRTQFRKAIDDNAARRPNPQKMLSCSYFDTPFIKRMDFLE 302 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18549.5796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18549.5796.1 >prot_Ecto-sp13_S_contig18549.5796.1 ID=prot_Ecto-sp13_S_contig18549.5796.1|Name=mRNA_Ecto-sp13_S_contig18549.5796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp FGFRGSYPAHTLGPRMVRAGQEGRAGGLGDALPLQRPQVPARGLQVLPQQback to top mRNA from alignment at Ecto-sp13_S_contig18549:874..3272+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18549.5796.1 ID=mRNA_Ecto-sp13_S_contig18549.5796.1|Name=mRNA_Ecto-sp13_S_contig18549.5796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18549:874..3272+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18549:874..3272+ >mRNA_Ecto-sp13_S_contig18549.5796.1 ID=mRNA_Ecto-sp13_S_contig18549.5796.1|Name=mRNA_Ecto-sp13_S_contig18549.5796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18549:874..3272+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |