mRNA_Ecto-sp13_S_contig18489.5766.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18489.5766.1
Unique NamemRNA_Ecto-sp13_S_contig18489.5766.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: D7FLP6_ECTSI (Cation_ATPase_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP6_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 5.130e-129
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLGF 618
            SLLLWAGAILCFVGF LQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTV+REGKTFTVESADICRGDLI+VEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFF+LGF
Sbjct:   84 SLLLWAGAILCFVGFGLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVVREGKTFTVESADICRGDLIRVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFILGF 289
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: A0A7S2KJ07_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJ07_9STRA)

HSP 1 Score: 267 bits (682), Expect = 3.680e-79
Identity = 128/205 (62.44%), Postives = 162/205 (79.02%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLG 615
            SLLLW GA+LCF+G+ +    ++LYLGIVL  VV VTG FS+ QN+KS++LM SF +M PPKV +IR+GK   + + ++  GD++ +EGGDL+PAD+R+++CSDN  VDNA LTGESEPQKRK + TH+DP+ETQNL FFGT  PEGSC  +V  T DNT+MG+IA LAMST NE+TPIN+EI HFI IIS IAI LGV+FFVL 
Sbjct:   83 SLLLWGGAVLCFIGYGIDSSPDHLYLGIVLVFVVVVTGVFSFMQNSKSENLMNSFKNMLPPKVKIIRDGKNDEIMALNLVPGDIVFLEGGDLVPADLRVLECSDNFQVDNAALTGESEPQKRKNVTTHEDPLETQNLCFFGTQVPEGSCKGIVISTGDNTVMGRIAALAMSTSNEQTPINREIHHFIYIISGIAIFLGVLFFVLN 287
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: A0A7S2Y0U5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0U5_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.190e-77
Identity = 126/206 (61.17%), Postives = 163/206 (79.13%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLGF 618
            SLLLW G+ILCF+ + L    +NL LG+VLA VVFVTGCFS++QN+KS++LMK+F  + P  V VIR+G+   V++ ++  GD+I++EGG+ +PAD+RI+ CSD+MVVDNAPLTGESEPQKR  + T ++P+ET+NL FFGT  PEG C  VV    DNT+MG IA LAM+T NE+TPINKEI HFIKIISAIAI LGV FF++G+
Sbjct:    6 SLLLWLGSILCFISYGLMAQTDNLALGVVLAFVVFVTGCFSFYQNSKSENLMKAFGKLLPKDVMVIRDGEWKQVDAKNLVLGDIIRLEGGNSVPADIRILSCSDDMVVDNAPLTGESEPQKRTNVSTDENPLETKNLCFFGTQVPEGKCTGVVICCGDNTVMGSIAALAMTTKNEQTPINKEIHHFIKIISAIAIALGVAFFIIGY 211
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: A0A7S2VWB4_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWB4_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.260e-75
Identity = 128/206 (62.14%), Postives = 160/206 (77.67%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQD-LENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLG 615
            SLLLW G ILCFVGF+L    ++ LYLG+VL  VV  TG FS+ QN KSD+LMKSFA+M PPKV V+R+G+T   E   +  GD++++  GDL+PAD+RI++CSDN+VVDNA LTGE+EPQKRK  CTH+DP+ETQNL FFGT  PEGSC  V+  T D+T+MG+IA LAMST  E+TPINKE+E+FI IIS IAI LGV F ++ 
Sbjct:   82 SLLLWLGGILCFVGFALDSSQVDYLYLGLVLCFVVLGTGIFSFIQNQKSDNLMKSFANMLPPKVLVLRDGETSYEEGVKLVPGDIVEINAGDLVPADLRILECSDNLVVDNASLTGEAEPQKRKKECTHEDPLETQNLCFFGTQVPEGSCKGVIISTGDHTVMGRIATLAMSTGGEQTPINKELENFIHIISGIAIALGVTFVIIN 287
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: F0YDS7_AURAN (Cation_ATPase_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDS7_AURAN)

HSP 1 Score: 256 bits (654), Expect = 2.250e-75
Identity = 126/202 (62.38%), Postives = 159/202 (78.71%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFF 606
            SLLLW  +  CFV +SL+ D+ENLYLGIVLA VV+VTGCFSY QN KSD++M  F +M PPKV V+R G+  T++ A +  GD++ +E GDL+PAD+R+++CS NM VDN+ LTGESEPQKRK  CTH+D +ET NL FFGT  PEGSC  +V + AD+T++G+IA LA+ST+ E+TPINKEI  FI IISAIAIILGV FF
Sbjct:   85 SLLLWGASAACFVSYSLKPDVENLYLGIVLAAVVWVTGCFSYLQNRKSDNMMAEFKAMRPPKVKVVRNGEPLTIDPALVTVGDIVLLEQGDLVPADLRVLECSPNMCVDNSSLTGESEPQKRKAECTHEDVLETANLCFFGTQVPEGSCRGLVVKIADDTVIGRIAKLALSTEAEQTPINKEIHRFILIISAIAIILGVSFF 286
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: Q9SXK5_HETAK (Na-ATPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=Q9SXK5_HETAK)

HSP 1 Score: 253 bits (646), Expect = 2.660e-74
Identity = 122/205 (59.51%), Postives = 158/205 (77.07%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLG 615
            SLLLW G ILCF+ + L+++++N+YLGIVL  VVFVTGCFS+FQN+KS++LMKSF  + PP +   R G+   V S  + +GD+I++EGG+L+P DVRII C+DN VVDNA LTGE+EPQKRK   THD+P+ET NLAFFGT+ PEGS   VV    D+T+MG+IA L +    ++TPINKEI HFI IIS+IAI LGV FF++G
Sbjct:   85 SLLLWGGGILCFIRYGLRKEVDNMYLGIVLFAVVFVTGCFSFFQNSKSENLMKSFEKLLPPSINAKRNGEFIKVPSEKLVKGDVIRLEGGELVPCDVRIITCTDNCVVDNASLTGEAEPQKRKNEATHDEPLETANLAFFGTNVPEGSLEGVVVNIGDDTVMGRIASLTLQVGAQQTPINKEIHHFILIISSIAIFLGVTFFIIG 289
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: A0A3L6VMU2_9STRA (Cation_ATPase_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VMU2_9STRA)

HSP 1 Score: 242 bits (618), Expect = 8.770e-73
Identity = 118/206 (57.28%), Postives = 158/206 (76.70%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLGF 618
            SLLLWA  ILC V ++LQ D+ NLYLGIVL  VV +TG FSYFQN KS +LM+SF +M P   TVIR+G++  ++++ + RGD+I ++GGD +PAD+RII+CSD++ VDN+ LTGE EP KR   CTHD P+ET+NL FFGT  P+GS   ++ RT D T+MG+IA LA ST  E+TPI KEIEHF+ II+A+A+ +G++F V+GF
Sbjct:  102 SLLLWAAGILCMVCYALQGDVNNLYLGIVLFCVVVITGLFSYFQNRKSSNLMESFKNMMPTITTVIRDGRSQKIDASLLVRGDVIAIKGGDKVPADIRIIECSDDLTVDNSALTGEPEPLKRVVHCTHDSPLETKNLCFFGTFIPQGSGKGLIVRTGDKTVMGRIAKLATSTKKEQTPIAKEIEHFVHIITAVAVSIGIIFLVIGF 307
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: A0A8J2T1N8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1N8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 8.510e-72
Identity = 121/202 (59.90%), Postives = 155/202 (76.73%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFF 606
            +LLLWA  + CFV + +    +NLYLG+VL  VV VTG FSY QNAKSD++M  F SM PP+VTV+R G+   V++A I  GD++K+E GDL+PAD+R+++CS NM VDN+ LTGES+P KRK  CT+ DP+ET NL FFGT  PEGSC  VV + ADNT++G+IA LA+ST+ E+TPINKEI HFI+IISAIA  LG+ FF
Sbjct:   92 NLLLWAAGVACFVSYGMLPQADNLYLGVVLFCVVTVTGVFSYLQNAKSDNMMNEFKSMRPPRVTVVRGGEVSFVDAALITIGDIVKLEQGDLVPADIRVLECSPNMCVDNSSLTGESDPIKRKPECTNADPLETANLCFFGTQVPEGSCVGVVVKIADNTVIGKIAQLALSTEAEQTPINKEIHHFIQIISAIAFALGISFF 293
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: A0A6A5AEC3_9STRA (Cation_ATPase_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AEC3_9STRA)

HSP 1 Score: 243 bits (619), Expect = 3.890e-71
Identity = 119/206 (57.77%), Postives = 158/206 (76.70%), Query Frame = 1 
Query:    1 SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLGF 618
            SLLLWA  ILC V ++LQ D+ NLYLGIVL  VV +TG FSYFQN KS +LM+SF +M P   TVIR+G++  ++++ + RGD+I ++GGD +PAD+RII+CSD++ VDN+ LTGE EP KR   CTHD P+ET+NL FFGT  P+GS   ++ RT D T+MG+IA LA ST  E+TPI KEIEHF+ II+A+A+ +G+VF V+GF
Sbjct:  102 SLLLWAAGILCMVCYALQGDVNNLYLGIVLFCVVVITGLFSYFQNRKSSNLMESFKNMMPTITTVIRDGRSQKIDASLLVRGDVIAIKGGDKVPADIRIIECSDDLTVDNSALTGEPEPLKRVVHCTHDSPLETKNLCFFGTFIPQGSGKGLIVRTGDKTVMGRIAKLATSTKKEQTPIAKEIEHFVHIITAVAVSIGIVFLVIGF 307
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BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Match: A0A7R9U5E7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5E7_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.780e-70
Identity = 123/208 (59.13%), Postives = 159/208 (76.44%), Query Frame = 1 
Query:    7 LLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDDLMKSFASMSPPKVTVIR---EGKTFT--VESADICRGDLIKVEGGDLIPADVRIIDCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCAAVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVVFFVLG 615
            LLWAG ILC + F+L+ +L+NLYLG+VL  VV +TG FS++QN KSD++M +F ++ PP+V V R   EGK+    VE+ +I RGD+I + GGD IPAD+RII CSD+M VDNA +TGES P KRK + T DDP+ET+NL FFGT  PEGSC  +V +  DNT +G+IA LA+ TD+++TPIN EIEHFI IISAIAI LGV FF++G
Sbjct:   90 LLWAGGILCMIAFALRAELDNLYLGVVLFAVVVITGLFSFYQNQKSDNMMAAFKNLLPPQVKVKRVNKEGKSEIKEVEAENIVRGDIIVLVGGDAIPADIRIIQCSDDMAVDNASITGESLPIKRKAVTTDDDPLETKNLCFFGTQVPEGSCEGIVIQVGDNTFLGRIAALALGTDSKQTPINIEIEHFIHIISAIAIFLGVTFFLIG 297
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18489.5766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP6_ECTSI5.130e-12998.06Cation_ATPase_N domain-containing protein n=2 Tax=... [more]
A0A7S2KJ07_9STRA3.680e-7962.44Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S2Y0U5_9STRA2.190e-7761.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2VWB4_9STRA1.260e-7562.14Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
F0YDS7_AURAN2.250e-7562.38Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
Q9SXK5_HETAK2.660e-7459.51Na-ATPase n=1 Tax=Heterosigma akashiwo TaxID=2829 ... [more]
A0A3L6VMU2_9STRA8.770e-7357.28Cation_ATPase_N domain-containing protein (Fragmen... [more]
A0A8J2T1N8_9STRA8.510e-7259.90Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6A5AEC3_9STRA3.890e-7157.77Cation_ATPase_N domain-containing protein (Fragmen... [more]
A0A7R9U5E7_9STRA1.780e-7059.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18489contigEcto-sp13_S_contig18489:1..3476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score401.0
Seed ortholog evalue3.4e-109
Seed eggNOG ortholog2880.D7FLP6
Preferred nameATP4A
Model size618
KEGG koko:K01539,ko:K01541,ko:K01542,ko:K01544
KEGG TC3.A.3.1,3.A.3.1.2,3.A.3.1.4
KEGG Pathwayko00190,ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04966,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map00190,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04966,map04970,map04971,map04972,map04973,map04974,map04976,map04978
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000166,GO:0001101,GO:0001504,GO:0001505,GO:0001508,GO:0001540,GO:0001664,GO:0001696,GO:0001700,GO:0001894,GO:0002026,GO:0002028,GO:0002036,GO:0002087,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003018,GO:0003674,GO:0003824,GO:0005102,GO:0005215,GO:0005391,GO:0005488,GO:0005496,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005783,GO:0005794,GO:0005886,GO:0005887,GO:0005889,GO:0005890,GO:0005901,GO:0005911,GO:0005918,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006836,GO:0006873,GO:0006874,GO:0006875,GO:0006883,GO:0006885,GO:0006928,GO:0006936,GO:0006937,GO:0006940,GO:0006941,GO:0006942,GO:0007043,GO:0007154,GO:0007165,GO:0007166,GO:0007215,GO:0007267,GO:0007268,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007416,GO:0007417,GO:0007420,GO:0007424,GO:0007528,GO:0007568,GO:0007586,GO:0007600,GO:0007605,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007626,GO:0007630,GO:0007632,GO:0008015,GO:0008016,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008217,GO:0008289,GO:0008306,GO:0008324,GO:0008340,GO:0008344,GO:0008360,GO:0008542,GO:0008556,GO:0008900,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009314,GO:0009416,GO:0009566,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010107,GO:0010155,GO:0010243,GO:0010248,GO:0010259,GO:0010522,GO:0010644,GO:0010646,GO:0010766,GO:0010817,GO:0010880,GO:0010881,GO:0010882,GO:0010894,GO:0010958,GO:0010959,GO:0012505,GO:0014069,GO:0014070,GO:0014704,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016311,GO:0016323,GO:0016324,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019216,GO:0019218,GO:0019222,GO:0019229,GO:0019637,GO:0019693,GO:0019722,GO:0019725,GO:0019829,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019932,GO:0019953,GO:0019991,GO:0021537,GO:0021543,GO:0021987,GO:0022414,GO:0022600,GO:0022603,GO:0022604,GO:0022607,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030007,GO:0030029,GO:0030030,GO:0030048,GO:0030054,GO:0030315,GO:0030317,GO:0030424,GO:0030425,GO:0030506,GO:0030534,GO:0030554,GO:0030641,GO:0030900,GO:0030955,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031402,GO:0031410,GO:0031420,GO:0031748,GO:0031943,GO:0031944,GO:0031946,GO:0031947,GO:0031982,GO:0032279,GO:0032350,GO:0032351,GO:0032353,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032553,GO:0032555,GO:0032559,GO:0032809,GO:0032870,GO:0032879,GO:0032890,GO:0032970,GO:0032991,GO:0033218,GO:0033993,GO:0034220,GO:0034329,GO:0034330,GO:0034641,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0035094,GO:0035150,GO:0035151,GO:0035152,GO:0035158,GO:0035159,GO:0035235,GO:0035296,GO:0035556,GO:0035637,GO:0035639,GO:0035725,GO:0036094,GO:0036376,GO:0036477,GO:0040007,GO:0040011,GO:0042221,GO:0042277,GO:0042383,GO:0042391,GO:0042493,GO:0042562,GO:0042578,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043197,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043271,GO:0043296,GO:0043297,GO:0043394,GO:0043395,GO:0043492,GO:0043531,GO:0043548,GO:0043576,GO:0044057,GO:0044065,GO:0044070,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044281,GO:0044291,GO:0044297,GO:0044298,GO:0044309,GO:0044326,GO:0044327,GO:0044424,GO:0044425,GO:0044444,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044853,GO:0045121,GO:0045177,GO:0045178,GO:0045202,GO:0045216,GO:0045822,GO:0045823,GO:0045833,GO:0045851,GO:0045932,GO:0045933,GO:0045939,GO:0045988,GO:0045989,GO:0046034,GO:0046483,GO:0046717,GO:0046872,GO:0046873,GO:0046885,GO:0046890,GO:0046903,GO:0046982,GO:0046983,GO:0048232,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048545,GO:0048583,GO:0048589,GO:0048609,GO:0048731,GO:0048856,GO:0048870,GO:0048871,GO:0048878,GO:0050780,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050804,GO:0050808,GO:0050810,GO:0050877,GO:0050880,GO:0050890,GO:0050896,GO:0050905,GO:0050954,GO:0050998,GO:0051049,GO:0051051,GO:0051055,GO:0051087,GO:0051117,GO:0051124,GO:0051128,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051270,GO:0051279,GO:0051282,GO:0051480,GO:0051481,GO:0051580,GO:0051588,GO:0051674,GO:0051704,GO:0051716,GO:0051899,GO:0051924,GO:0051926,GO:0051941,GO:0051946,GO:0051952,GO:0051955,GO:0051966,GO:0055065,GO:0055067,GO:0055074,GO:0055075,GO:0055078,GO:0055080,GO:0055082,GO:0055085,GO:0055086,GO:0055117,GO:0055119,GO:0060047,GO:0060048,GO:0060075,GO:0060081,GO:0060249,GO:0060322,GO:0060341,GO:0060438,GO:0060439,GO:0060541,GO:0061337,GO:0065007,GO:0065008,GO:0065009,GO:0070160,GO:0070252,GO:0070887,GO:0071214,GO:0071229,GO:0071260,GO:0071300,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0072503,GO:0072507,GO:0072521,GO:0080090,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086009,GO:0086010,GO:0086011,GO:0086012,GO:0086013,GO:0086036,GO:0086037,GO:0086064,GO:0086065,GO:0090030,GO:0090032,GO:0090066,GO:0090075,GO:0090257,GO:0090533,GO:0090662,GO:0097066,GO:0097067,GO:0097159,GO:0097367,GO:0097447,GO:0097458,GO:0097574,GO:0097708,GO:0097722,GO:0097746,GO:0098533,GO:0098589,GO:0098590,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098739,GO:0098771,GO:0098794,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0098916,GO:0098984,GO:0099131,GO:0099132,GO:0099177,GO:0099536,GO:0099537,GO:0099572,GO:0099587,GO:0099622,GO:0104004,GO:0106027,GO:0120025,GO:0120036,GO:0120038,GO:0140115,GO:1901019,GO:1901020,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901681,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902305,GO:1902306,GO:1902494,GO:1902495,GO:1902600,GO:1903115,GO:1903169,GO:1903170,GO:1903279,GO:1903280,GO:1903416,GO:1903522,GO:1903523,GO:1903524,GO:1903789,GO:1903959,GO:1904062,GO:1904063,GO:1904645,GO:1904646,GO:1904949,GO:1990239,GO:1990351,GO:1990535,GO:1990573,GO:1990794,GO:2000649,GO:2000650,GO:2001023
Exons6
EggNOG free text desc.sodium:potassium-exchanging ATPase activity
EggNOG OGsCOG0474@1,KOG0203@2759
EC3.6.3.10,3.6.3.9
Cds size618
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18489.5766.1prot_Ecto-sp13_S_contig18489.5766.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18489 1..3476 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462949.5201178-CDS-Ecto-sp13_S_contig18489:0..571681462949.5201178-CDS-Ecto-sp13_S_contig18489:0..57Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18489 1..57 +
1681462949.5310278-CDS-Ecto-sp13_S_contig18489:748..8771681462949.5310278-CDS-Ecto-sp13_S_contig18489:748..877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18489 749..877 +
1681462949.5392945-CDS-Ecto-sp13_S_contig18489:1158..12481681462949.5392945-CDS-Ecto-sp13_S_contig18489:1158..1248Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18489 1159..1248 +
1681462949.5496113-CDS-Ecto-sp13_S_contig18489:1665..17941681462949.5496113-CDS-Ecto-sp13_S_contig18489:1665..1794Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18489 1666..1794 +
1681462949.5598438-CDS-Ecto-sp13_S_contig18489:2369..25281681462949.5598438-CDS-Ecto-sp13_S_contig18489:2369..2528Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18489 2370..2528 +
1681462949.5697668-CDS-Ecto-sp13_S_contig18489:3422..34761681462949.5697668-CDS-Ecto-sp13_S_contig18489:3422..3476Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18489 3423..3476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18489.5766.1

>prot_Ecto-sp13_S_contig18489.5766.1 ID=prot_Ecto-sp13_S_contig18489.5766.1|Name=mRNA_Ecto-sp13_S_contig18489.5766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
SLLLWAGAILCFVGFSLQQDLENLYLGIVLAVVVFVTGCFSYFQNAKSDD
LMKSFASMSPPKVTVIREGKTFTVESADICRGDLIKVEGGDLIPADVRII
DCSDNMVVDNAPLTGESEPQKRKTICTHDDPMETQNLAFFGTSCPEGSCA
AVVCRTADNTLMGQIAGLAMSTDNEETPINKEIEHFIKIISAIAIILGVV
FFVLGF
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mRNA from alignment at Ecto-sp13_S_contig18489:1..3476+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18489.5766.1 ID=mRNA_Ecto-sp13_S_contig18489.5766.1|Name=mRNA_Ecto-sp13_S_contig18489.5766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3476bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18489:1..3476+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCCCTGCTGCTGTGGGCCGGAGCGATCCTCTGTTTCGTCGGATTCAGTCT
TCAGCAGGTACTAAATAAAACACGAGGATAAACGCGAAGATAAATGCGCT
ATGATGGTATCAACATTGCGTCCGTCTTACTCGTTTGTCTCCGCATTGCA
CTATGCATCCAACAATCATGATTATGATGCTCGCCGCATTCATGGAACAC
CCGCTAGAAATAGTCCACAGGAGGAAGATAACTGCTATGCAGTGACTCGT
CATACCATGTTAGGCCCCGAAAGTGCCAACAAGAGAGACAAGGTTTTTAG
CAATACTGTGCAATATCGACAAATAAGAGATGCGGCTAACCCTAAGTTGC
ACCAGACCTCGTTTGCTTGGCAAGTTCAGACTTTTCTAGCTGCTGTTGCT
TGCCAGAACAAGACAATCGAATGTACCGATAGCGTTTGACCAAGAAGATT
TGTCGGCCTCCATAACTACGTACGATAAGAACCCCGTCCTCAAAATGACC
CTTCCTTCCCGCCCCTCTCCCCCTCCCTTTCCTCTCCGCTGTGTGCACGT
TGGCTGTGCGTTTCCCACGGAACACCCCATCACTCCATCACCGTACGGTT
TATCTTGCGGGTTGTCCGGTGTGCCGAACGGGCTTGTACACACAACGGCC
ATGATTGTTTGCACGACACCAACGACTACGACAACGACTACGACAACGAC
CCCAACGATGATGATGACGACGACGACGATAAAACCAACGCAACGCAGGA
CTTGGAGAACTTGTACCTGGGTATCGTGCTGGCTGTCGTGGTGTTCGTGA
CGGGGTGCTTCTCCTACTTCCAGAACGCGAAATCCGATGACCTCATGAAG
TCGTTCGCTAGCATGTCGCCGCCTAAGGTCGGTCAGGCGGGGGATGGGAG
GGGGGCCGTTGCCGCTGTTTGTGGTGCATGATGGTGTTGTTGTTGTTGTC
ATGGTCGTCTTAGTCGTCGTCTCTGTCTCCGTCATAGTTTCGTTGATTTT
TTTCGAGATGAGTGCACTGGCTTACCTAGTCCCTCGTGTGTTGGATGTCC
AATTAAATTGGCATGCTCTTCACGTCTCTCTTTCACCGTTGGATGGGGTT
TTCGAATCTTGATCCTCCCGTTCGACTTACGTTTGTTTTTTTCTTCTTTT
TTTACCAGGTGACCGTCATCCGGGAAGGCAAGACGTTCACTGTAGAGTCC
GCCGACATTTGCCGCGGTGACCTGATCAAGGTGGAGGGCGGTGACCTGGT
GAGTTTATAAAGTTAACCAAGAAAGGGACAGGAAGGAAGGAAGGAAGCAG
TAGGAGAGGACGCTAGCTAGTGGATTTAGTTTTACTCTTTGTATTTGTAG
CGCACGATGGAGGGGCGCGTGGGCGAGAGAGGGAGGTGCGCACTAGCGGC
GGTCATGTCATGATCATGGTCATACTAATGCTACAAGCCTGGGTTCAGCT
CGCGATTGTGATGGCAATGATGTGCACCTTAAACTGGGTGTCCGTGGTGC
CGTCCCATTCTCATCGCGGATAGCATCGCCACTTCTTGAAGTAACCCAAA
CCCTAGACGTGTTCTGCTCTTGTGTGCGTGAGCCCGTTCACTTCGCCCCT
TCCCTTACTCGTGCCATCGGTTCCGTACCGTACCGTACCGTACCGTACCG
GTTTACGTGATCTAGATTCCCGCGGACGTGCGCATCATCGACTGCTCGGA
CAACATGGTTGTCGACAACGCCCCCCTCACGGGAGAGTCGGAGCCCCAGA
AGCGGAAGACCATATGCACCCACGACGACCCCATGGAAACCCAGGTGCGA
TGGCCGTCACGTTTGATGACGCACGATCTGGCACAGTACGGTTTTGGTGG
GTGAGGGTGTTCTGTACAACCTGCTTGTAGAGAAGTTGGTTGGATTCGTG
ATTTCGTTGAATGTTTTTTCGGGGGAAGGAACGTAAGAGGCGCAGCTAAT
TGGTGAGATGTTTTGTAGACCGATGGTGCTTCCTTCAAGTCGAGGAGCCA
TAGAATACAGGAGTGTTGTCGTACAGTTTTGTGAACACAGCAGATGGTGC
ATTAAATGGAATGGACCACACGATGAAGAGACTCTCGATTATTCGAACTG
AGACGTAAGGCGAACCTTCCTCGTGGTCTCCGAGCAAGCCAACGCAACTC
TATAATAACTATTGTACTAGCATTCGTTCTGCAGTGGTGGCTCACTGCTG
GCGGTAGGGGCAACAACCCCACACTCATTCACACATGCTTACGCCAACCC
CTTGGAACATGACGGTTCCACTACACTGAGAAAAACACTTTGCTTTTGAC
GTCGACTGATTTTATGCTTCTTCAACCTCGATCTTTCTTGCTCACTTTTT
TTTTTTTCTGTGAAAAAAGAACTTGGCCTTCTTCGGAACGAGCTGCCCCG
AGGGCTCCTGCGCTGCTGTGGTGTGCCGTACCGCCGACAACACCCTCATG
GGACAGATCGCCGGTCTCGCCATGAGCACCGACAACGAGGAGACGCCCAT
CAACAAGGAGATCGAGCACTTCATCAAGGTGAAGAGACAAAAAAGAAAGT
ATGATTGTGGTCCCGATACGGTACAAGGCGGGTACGGAACGGTAAGGTAG
GTGCCAGCCCCTTTGAAACGGTACTAAAGCGGGTAACCGGCATGATGGAA
ACAACCTCGAATGTTCCATTTGCGCTAGACGATGTCACCGGCATAGTACA
GGGCGACCGGCGTTATAGCGGGACCATTATTGCAGATGATGCAGAGGGGG
GTGCACCGAAACAGGCCTTGTCATGTGGAGTCTGTAGTCGCCGCAGTCCA
TGTTTGAGTATTACGGTGTTATGAGAGTCCGCACTCCGTGGGACGATATG
AGAGTGATAAAAGACACTCATTAGTGGGGGGGTGGAGCTTTCAGTAAGAG
TAAAATAATAGAGGAAGTTGCACAGAAACAGGCCTCGTCACGTGGTACTC
TGGATAGGTATGCGTGCAGTTGGTCGTAGAATGTATTCCTTTAATGACGG
CTATCGCTAGCATTGCTTTGTTCATAAAGTTGATAGTGAGGTGACGTGTT
GGATGTTTTGGCGACCTTGACTTCTGATGTTTGTTTGGTGAACGAGGAGG
GTTGTTTAGGGGCGATGGCCCCAATTGTGACGATTATTGAAACCTGTGTT
TCTCTTTGTCATATTTGATGGTGTCCGGCAGTGACTGAACATTATTTCGA
GGTATATATTTCGAGCATCCAGCACGAGCGGTTGCTGCCAATTTGTTTCT
CGGCAATTTTCTGTTGCGACTTGCTGTGCGTGTGCTGTCGGTTGGATGCG
CTGTATGTTGACTCCCCACCCCCACGAAGGCATCTCCCCGTCCGTCCTTC
TCGTTGCCGGTACCATTAACGTAACGTGCGGCCCTCCTGCCCGTCCCTCT
GATCGCTGTCATGCTTTTGTAGATCATCTCGGCCATCGCCATCATCCTGG
GGGTGGTGTTCTTCGTCCTCGGGTTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18489:1..3476+

>mRNA_Ecto-sp13_S_contig18489.5766.1 ID=mRNA_Ecto-sp13_S_contig18489.5766.1|Name=mRNA_Ecto-sp13_S_contig18489.5766.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=618bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18489:1..3476+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCCCTGCTGCTGTGGGCCGGAGCGATCCTCTGTTTCGTCGGATTCAGTCT
TCAGCAGGACTTGGAGAACTTGTACCTGGGTATCGTGCTGGCTGTCGTGG
TGTTCGTGACGGGGTGCTTCTCCTACTTCCAGAACGCGAAATCCGATGAC
CTCATGAAGTCGTTCGCTAGCATGTCGCCGCCTAAGGTGACCGTCATCCG
GGAAGGCAAGACGTTCACTGTAGAGTCCGCCGACATTTGCCGCGGTGACC
TGATCAAGGTGGAGGGCGGTGACCTGATTCCCGCGGACGTGCGCATCATC
GACTGCTCGGACAACATGGTTGTCGACAACGCCCCCCTCACGGGAGAGTC
GGAGCCCCAGAAGCGGAAGACCATATGCACCCACGACGACCCCATGGAAA
CCCAGAACTTGGCCTTCTTCGGAACGAGCTGCCCCGAGGGCTCCTGCGCT
GCTGTGGTGTGCCGTACCGCCGACAACACCCTCATGGGACAGATCGCCGG
TCTCGCCATGAGCACCGACAACGAGGAGACGCCCATCAACAAGGAGATCG
AGCACTTCATCAAGATCATCTCGGCCATCGCCATCATCCTGGGGGTGGTG
TTCTTCGTCCTCGGGTTC
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