mRNA_Ecto-sp13_S_contig1840.5719.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1840.5719.1
Unique NamemRNA_Ecto-sp13_S_contig1840.5719.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: D8LJR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR3_ECTSI)

HSP 1 Score: 1067 bits (2759), Expect = 0.000e+0
Identity = 639/687 (93.01%), Postives = 650/687 (94.61%), Query Frame = 1
Query:    1 MATRVGLIRARGHSCRAQLVHGQLQSSISGVRLLARLSSSSSRSTALKGSASGSSSSAPLAFFPRARRNQYPASSLFLGRRDSVSGGKALFSSTTATRPAQEEGAAQDSDPGHSSRSSNNNKPGRKTFDGEDNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDAFALQDGRAAPPFGIEGTSSENWRKASEARKYGSQQDGGGSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVXXXXXXXXXXXXXXXXEGXXXEGPEQEEGSGREDKKILGSGPVWEEMKALAESKRKPLKGVRRVVVQPGQRSYLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLP--SMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNKASAALEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAERKRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNEPLDTMEVAKVHAKSDGLPEHVFDTCRAGRYRTAVHEQ 2055
            MATR GLIRARGHSCRAQLVH QLQSSISGVRLLARLSSSSSRSTALKGSASGSSSSAPL F P A R+QYPASS+FLGRRDS S GKALFSSTTATRPA EEGAAQDSDPGHSS SS+ +KPGRKTFDG +NDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDAFA +DG AAPPFGIEGTSSENWRK SEAR+YGSQQDG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXX    X GPEQEEG G EDKK+LGSGPVWEEMKALAESKRKPLKGVRRVV+QPGQRSYLLTGRRGSGKSCVL+HAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLP  SMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNK    LEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAERKRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPP+KRLRKNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNEPLDTMEVAKVHAKSD LPEHVFDTCRAGRYRTAVHEQ
Sbjct:    1 MATRFGLIRARGHSCRAQLVHDQLQSSISGVRLLARLSSSSSRSTALKGSASGSSSSAPLGFRPPAHRHQYPASSIFLGRRDSGSCGKALFSSTTATRPAPEEGAAQDSDPGHSSSSSSGSKPGRKTFDGGNNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDAFAPEDGGAAPPFGIEGTSSENWRKVSEARQYGSQQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXGPEQEEGKGGEDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQRSYLLTGRRGSGKSCVLDHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPVQSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNK----LEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAERKRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPPLKRLRKNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNEPLDTMEVAKVHAKSDSLPEHVFDTCRAGRYRTAVHEQ 679          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: A0A6H5KXH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH7_9PHAE)

HSP 1 Score: 790 bits (2040), Expect = 1.400e-277
Identity = 522/627 (83.25%), Postives = 537/627 (85.65%), Query Frame = 1
Query:    1 MATRVGLIRARGHSCRAQLVHGQLQSSISGVRLLARLSSSSSRSTALKGSASGSSSSAPLAFFPRARRNQYPASSLFLGRRDSVSGGKALFSSTTATRPAQEEGAAQDSDPGHSSRSSNNNKPGRKTFDGEDNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDAFALQDGRAAPPFGIEGTSSENWRKASEARKYGSQQDGGGSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVXXXXXXXXXXXXXXXXEGXXXEGPEQEEGSGREDKKILGSGPVWEEMKALAESKRKPLKGVRRVVVQPGQRSYLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNKASAA---LEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAERKRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVSIPV 1872
            MATRVGLIRARGHSCRAQLVHG LQSSISGVRLLARLSSSS R+TA+KGS SG SSSAPLAF P  RR+QYPASS+FLGR DS SGGKALFSSTTATRPA EEGAAQDSDPG SS      KPGRKTFDG+DNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGG QGALERAMAGGTSTALLRREAADALIHSLDAFA + G A PPFGIEGTSSENWRKA EAR+YGSQQD       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXX  XXXEGPEQEEG GREDKK+LGSGPVWEEMKALAESKRKPLKGVRRVV+QPGQ         G G           AR+   I+   P             P PVL+      SMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMS W+YGD+KASAA   LEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAE KRTPAEAGG AWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVS+ V
Sbjct:    1 MATRVGLIRARGHSCRAQLVHGPLQSSISGVRLLARLSSSS-RNTAVKGSPSGRSSSAPLAFRPPDRRHQYPASSIFLGRSDSGSGGKALFSSTTATRPAHEEGAAQDSDPGRSSXXXXXXKPGRKTFDGKDNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGRQGALERAMAGGTSTALLRREAADALIHSLDAFAPEHGGAVPPFGIEGTSSENWRKACEARQYGSQQD-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPEQEEGRGREDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQ---------GGGAP---------ARAASSIM---PSSTPAPAHPTLRSPPPVLQ------SMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSHWYYGDSKASAAVSRLEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAETKRTPAEAGGGAWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVSVRV 592          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: A0A836C8P4_9STRA (Mitochondrial ribosomal death-associated protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.110e-37
Identity = 114/341 (33.43%), Postives = 170/341 (49.85%), Query Frame = 1
Query: 1072 QRSYLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLP--SMKRLKTLREAHGDQLKNISIKDPEVLGRHE---GAKTLLDVMDM---------GLADQ-----EHAGTAHY-DVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNKASAALEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAERKRTPAE-----AGGVAWMSPETGAACLPPP--PANGIVVCAVSGRYPPVKRLR-KNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNEPLDTMEVAKVHAKSDGLPEHVF 2010
            QR++LL G RG+GKS  LNHAV +AR+ GW+VLFVP+ R L++ GIYCQPS  + G+YD P  + + +  L  AHG QL+ + ++D     R+    G+   L V DM         G+ D+     E+A    + D++ ELL+T    V+LA+DEY+ELFQ S WHY         +  HL A                  +D    +    +  + +R P E     A  + +  P  G  C P P  P  G V+ A +  YPPV++++ K+ +W  F+   G  A   ++   PY+  EF   L HYA  +      L   +VA+V  K+   P+ +F
Sbjct:  241 QRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHY-------RRDVDHLAAFD-------------IDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKTMLNPKLIF 561          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: A0A7S2DHI4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHI4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.330e-18
Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 1093 GRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPSMKR--LKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNK 1527
            G RG+GK+  L H V  AR  GWI L +P GR LV  G++  PS   +G +D P +    LK    AH   L  ++++      R+    TL DV+ +G+AD++ A  A   +  EL+A TE  V++AIDEYN LF+ + + +   +
Sbjct:  125 GERGTGKTATLLHTVHWARREGWITLHIPSGRELVYGGLWVNPSSEKDGSFDQPQVAHQILKDFGAAHSHDLTALNLQHAASKNRY--GSTLADVLQIGIADEDEATAALVVLKGELVAQTERPVLIAIDEYNALFEATPYSFAQKQ 269          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: A0A1V9Y7H5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7H5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 8.930e-13
Identity = 56/165 (33.94%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 1075 RSYLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLP--SMKRLKTLREAHGDQLKNISI---------------KDPEVLGRHEGAK-TLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHY 1515
            ++++L G RG+GK+  L   V  AR  GWIVLF P  R       Y   S  +EG +D+   +M  +K L E HG+QL  + I               K P+    +     TLLD+ + GL D   + +A  D+  EL   T+  V++AIDEYN LF+ + + Y
Sbjct:   15 KAFVLDGERGTGKTVALLQIVQFARENGWIVLFAPQVRAWCYDAPYVTKSAHIEGKFDIDVVAMDIIKQLIEFHGEQLAELLIQGDYADNKYYPRSFEKKPKSSSEYNKEDLTLLDMAENGLKDDLLSCSALVDLRAELAKVTKYPVLIAIDEYNTLFEKTVFGY 179          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: A0A067CQ98_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ98_SAPPC)

HSP 1 Score: 70.1 bits (170), Expect = 7.280e-9
Identity = 52/152 (34.21%), Postives = 75/152 (49.34%), Query Frame = 1
Query: 1114 SCV-LNHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLP--SMKRLKTLREAHGDQLKNISI--------------KDPEVLGRHEGAK-TLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHY 1515
            +CV L   V  AR  GWIVLF P  R    +  Y   S  ++G YD+   +M  LK L ++HG QL  + +              K P+    ++ A  TLLD+ + GL D   +  A  D+  EL   T+  V++AIDEYN LF+ + + Y
Sbjct:  143 TCVALLQIVNFARENGWIVLFAPHVRAWCYEAPYVTKSAHIQGKYDIDVVAMDVLKQLIQSHGHQLAELPLSADYGDKYYPHTFEKKPKSTSEYDKASLTLLDMAENGLKDDLLSCAALVDLRAELAKVTKFPVLIAIDEYNTLFEKTVFGY 294          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: L0AY18_THEEQ (FSH1 domain-containing protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L0AY18_THEEQ)

HSP 1 Score: 65.9 bits (159), Expect = 2.930e-7
Identity = 53/208 (25.48%), Postives = 89/208 (42.79%), Query Frame = 1
Query: 1075 RSYLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQK---------GIYCQPS--------------------PVLEGLYDLPSM---------------------KRLKTLRE-AHGDQLK------------NISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQW 1509
            R  LL G+RGSGKS +LNH  L AR+ GW+V+  P      ++         G+Y Q                      PV++ LY   S+                     + L+ L+E +  D+++                K P +  R E  KTLLD+ + G+ ++  A  A Y++  +L   T+  +++ +DE+NE F +S++
Sbjct:  386 RGVLLDGKRGSGKSYILNHVSLWARNNGWMVIIEPSPSKYAKEVGTIKRSNAGVYIQLEFAKAFLERLILSNKTYLSEIPVIQSLYGRVSLDGNYVNYSKRSFDPVIENIIKEELEILKEESQPDEIECAKETLKLWDCYRRQFKIPILKERLENPKTLLDIAEFGVNNETFANQAVYEIFDQLKHQTKFPLLIVVDEFNECFPVSEY 593          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: A0A7S2XP72_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP72_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.190e-7
Identity = 56/201 (27.86%), Postives = 91/201 (45.27%), Query Frame = 1
Query: 1087 LTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPSMKR--LKTLREAHGDQLKNISIKDPEVLGRH----------------EGAKTLLDVMDMGLADQE--HAGTAHYDV-MRELLATTEAKVMLAIDEYNELFQMSQWHYGDNKASAALEAPHLTATLPLLPPLVSTGTGLAFADDS 1626
            +TGR+G GKS  L   V  AR++G+IV+++PDG  + + G Y +PS    G YDLP + +     L E H   L ++ +  PE   ++                  A T++ V+D+     E     +A Y   M  L+  T    ++  DE+N  +     HY        +  P   +++ L  PL++T  G+   DDS
Sbjct:  431 VTGRQGMGKSASLAAIVASARTSGYIVMYMPDGDRMRKLGKYIEPSSKRRGFYDLPFLAKEVCGALLENHESDLHDMVV-SPETCSKYLTEEYMKKVKELNREDASADTIITVVDLLKTGSELIDISSACYSASMDTLMNQTTKPFVIVSDEFNGYYDRG--HYYHMSYDPLVHKPIPYSSMTLFEPLLNT-LGVMVDDDS 627          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: I7J5U2_BABMR (Mitochondrial ribosomal death-associated protein 3 n=1 Tax=Babesia microti (strain RI) TaxID=1133968 RepID=I7J5U2_BABMR)

HSP 1 Score: 63.9 bits (154), Expect = 7.900e-7
Identity = 51/198 (25.76%), Postives = 84/198 (42.42%), Query Frame = 1
Query: 1081 YLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPD------------------------GRNLVQK-----GIYCQPSPVLEGLYDLPSM--KRLKTLREAHGDQLKNISIKDPE------------------------VLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQW 1509
            +LL G+RGSGKS +LNH VL AR  GW+V+F PD                          NL+ +     G   +  P+   ++ L S+    ++  R A    ++ I  +D E                         +  H    TLLD+ + G ++   A  A Y++  +L   T   +++AID++NE F +S++
Sbjct:  141 FLLDGKRGSGKSSILNHVVLWARQNGWLVIFEPDVSRYCREIGEIKRSNANIFIQSDFAANLLARIKESNGELLKKIPLNSKIFGLTSLDGSNVRYARRAFDPLIQKIIAQDLEDFQGDIDLERLRLWHKYRNDFKLPSIKMHLQPNTLLDIAEFGASNPPLANQALYELFEQLKQQTYYPLLIAIDKWNECFPVSEY 338          
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Match: A0A2T7I0Y1_THEOR (Uncharacterized protein n=1 Tax=Theileria orientalis TaxID=68886 RepID=A0A2T7I0Y1_THEOR)

HSP 1 Score: 63.5 bits (153), Expect = 1.130e-6
Identity = 56/208 (26.92%), Postives = 86/208 (41.35%), Query Frame = 1
Query: 1075 RSYLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQK---------GIYCQPS--------------------PVLEGLYDLPSM---------------------KRLKTLRE-AHGDQLK------NI------SIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQW 1509
            R  LL G+RGSGKS +LNH  L AR  GW+V+  P       +         G+Y Q                      PV+  LY L S+                     + L  L+E ++ D+L+      N+        K P +  R +  KTLL++ D G+ ++  +  A Y++  +L   T   ++  IDEYNE F  S++
Sbjct:  160 RGVLLDGKRGSGKSFILNHVALWARKNGWMVIHEPSASKYSTEVGSIKRSNAGVYIQLEFARSFLERLLMKNEHFLSQIPVIRPLYGLVSLDGNHLRYSKRMFDPVIEKIIKEELDILKEDSNPDELECAREKLNLWNTYRKQFKIPVLSDRLQNPKTLLEIADFGVNNETFSNQAVYELFNQLKHQTMFPLLFIIDEYNECFTASEY 367          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1840.5719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJR3_ECTSI0.000e+093.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXH7_9PHAE1.400e-27783.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8P4_9STRA1.110e-3733.43Mitochondrial ribosomal death-associated protein 3... [more]
A0A7S2DHI4_9STRA5.330e-1836.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9Y7H5_9STRA8.930e-1333.94Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067CQ98_SAPPC7.280e-934.21Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
L0AY18_THEEQ2.930e-725.48FSH1 domain-containing protein n=1 Tax=Theileria e... [more]
A0A7S2XP72_9STRA5.190e-727.86Hypothetical protein n=1 Tax=Attheya septentrional... [more]
I7J5U2_BABMR7.900e-725.76Mitochondrial ribosomal death-associated protein 3... [more]
A0A2T7I0Y1_THEOR1.130e-626.92Uncharacterized protein n=1 Tax=Theileria oriental... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1840contigEcto-sp13_S_contig1840:457..7389 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1078.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LJR3
Preferred nameDAP3
Model size2654
KEGG koko:K06072,ko:K17408
Hectar predicted targeting categorymitochondrion
GOsGO:0000313,GO:0000314,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0006915,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0012501,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0022411,GO:0023052,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032543,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070013,GO:0070125,GO:0070126,GO:0071704,GO:0071840,GO:0097190,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons10
EggNOG free text desc.mitochondrial translation
EggNOG OGsKOG3928@1,KOG3928@2759
Ec32 ortholog descriptionMitochondrial ribosomal protein S23/S29
Ec32 orthologEc-12_002970.1
EC1.14.99.29
Cds size2058
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko01000,ko03011,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1840.5719.1prot_Ecto-sp13_S_contig1840.5719.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1840 1053..7389 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462945.6642587-UTR-Ecto-sp13_S_contig1840:456..10521681462945.6642587-UTR-Ecto-sp13_S_contig1840:456..1052Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1840 457..1052 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462945.6790624-CDS-Ecto-sp13_S_contig1840:1052..11681681462945.6790624-CDS-Ecto-sp13_S_contig1840:1052..1168Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 1053..1168 -
1681462945.6890316-CDS-Ecto-sp13_S_contig1840:1558..16371681462945.6890316-CDS-Ecto-sp13_S_contig1840:1558..1637Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 1559..1637 -
1681462945.6993184-CDS-Ecto-sp13_S_contig1840:2192..25161681462945.6993184-CDS-Ecto-sp13_S_contig1840:2192..2516Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 2193..2516 -
1681462945.7102242-CDS-Ecto-sp13_S_contig1840:2833..29771681462945.7102242-CDS-Ecto-sp13_S_contig1840:2833..2977Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 2834..2977 -
1681462945.7187226-CDS-Ecto-sp13_S_contig1840:3447..35131681462945.7187226-CDS-Ecto-sp13_S_contig1840:3447..3513Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 3448..3513 -
1681462945.7270825-CDS-Ecto-sp13_S_contig1840:3917..39921681462945.7270825-CDS-Ecto-sp13_S_contig1840:3917..3992Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 3918..3992 -
1681462945.7352924-CDS-Ecto-sp13_S_contig1840:4535..46411681462945.7352924-CDS-Ecto-sp13_S_contig1840:4535..4641Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 4536..4641 -
1681462945.743531-CDS-Ecto-sp13_S_contig1840:5217..52911681462945.743531-CDS-Ecto-sp13_S_contig1840:5217..5291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 5218..5291 -
1681462945.7518115-CDS-Ecto-sp13_S_contig1840:5573..62121681462945.7518115-CDS-Ecto-sp13_S_contig1840:5573..6212Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 5574..6212 -
1681462945.759906-CDS-Ecto-sp13_S_contig1840:6954..73891681462945.759906-CDS-Ecto-sp13_S_contig1840:6954..7389Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1840 6955..7389 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1840.5719.1

>prot_Ecto-sp13_S_contig1840.5719.1 ID=prot_Ecto-sp13_S_contig1840.5719.1|Name=mRNA_Ecto-sp13_S_contig1840.5719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=686bp
MATRVGLIRARGHSCRAQLVHGQLQSSISGVRLLARLSSSSSRSTALKGS
ASGSSSSAPLAFFPRARRNQYPASSLFLGRRDSVSGGKALFSSTTATRPA
QEEGAAQDSDPGHSSRSSNNNKPGRKTFDGEDNDDRLARLDDGDKYEDFF
DLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDA
FALQDGRAAPPFGIEGTSSENWRKASEARKYGSQQDGGGSKADAATVAAA
SPADKDRDNAGDDDDIIGDVTAAAAEGAAAAAAAAEAVKAAARAAAEAAA
AAGGEGAGGEGPEQEEGSGREDKKILGSGPVWEEMKALAESKRKPLKGVR
RVVVQPGQRSYLLTGRRGSGKSCVLNHAVLHARSTGWIVLFVPDGRNLVQ
KGIYCQPSPVLEGLYDLPSMKRLKTLREAHGDQLKNISIKDPEVLGRHEG
AKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQM
SQWHYGDNKASAALEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPE
VVAERKRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRL
RKNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNEPL
DTMEVAKVHAKSDGLPEHVFDTCRAGRYRTAVHEQ*
back to top

mRNA from alignment at Ecto-sp13_S_contig1840:457..7389-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1840.5719.1 ID=mRNA_Ecto-sp13_S_contig1840.5719.1|Name=mRNA_Ecto-sp13_S_contig1840.5719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1840:457..7389- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGACTAGGGTTGGGTTGATTCGGGCCCGGGGCCATTCATGTAGGGC TCAACTCGTGCACGGCCAGCTGCAGAGCTCGATCAGCGGTGTGCGGTTGC TGGCCCGCCTCTCTTCCTCCTCTTCACGCAGCACTGCTCTCAAGGGCAGC GCCAGCGGCAGCAGCAGCAGTGCTCCGTTAGCGTTTTTCCCTCGCGCTCG TAGAAACCAGTACCCCGCATCGTCTCTTTTCCTGGGGAGAAGAGACAGCG TTAGTGGCGGCAAGGCTCTGTTTTCGTCGACTACAGCAACCAGGCCTGCT CAAGAGGAAGGAGCTGCGCAGGACTCGGACCCGGGCCACAGCAGCAGAAG CAGCAACAACAACAAACCCGGGCGAAAGACGTTTGATGGGGAAGACAACG ACGACAGGCTCGCTAGGCTGGACGATGGGGATAAGGTGTGTTGACGGTGT GTAGCGTTTTGTCTGCAAAAGTATCCAGGTGTCCATTTTGGTCGGGTGCG CTTGGTTGCCATGTACGGGGAGGCCGAGGCCGCCCTGGTGCGCATCGTTG CGCGGCTTTGCAACCCAGTGCACTCGAGGACGGTGTGGCAACAAGAACGG CAAATGATCTAGCACAATACAGCAGCAGTTTCGACCTTCGTGTGGTCCCA ACAAGAGTTTGTGCGCAGGGTGCGACGTAATTCCTGCAGAGCGGGTAAGA CAAGCCGGGAACGGGGCTGGTGACCTCCGGCCGCCGCCGCCGCCGCCGAC ATTGTACGGCAGTAGGCTACAGCGCGGACGCTGCGGTGTTTACGTTCGGG CGCAGCAGCAGCGGTGATTCGCACGTATGCGAGCGATTGCACATCGAGCA GCCGCATGACGAGCGCGCGGGCGATTTGCAGTTCCAGGAGGCATATGTGT TTCACGTCAGCCCTCCATCTCATAATACAAAAGGGGGCCGTCCCACCCTA CTCGCTGGGTAGCAGCCGTCCGTGCAAACATGAACCCATCGATCCGGTGC TTCGGCAGCCGTGCGCGTCATTCGTCCACGGCATTTGTTTGCACGCACCA ACACGCGCTCCCATCAAGGTACAAGCGCTTCTTTTTAATTGAGCCGGCCT TTCCGTCGGCCCCCTTCTCACTCACTCGCCGTCGCGCTTCCTCCCTTTGT ATCCTCATCACGTAAATGACTCAACAGTACGAGGACTTCTTCGACCTTCG GTTAGCGGAGGCGGAGACCATCTTCCCGGAGGGCCTCGCTGGCGGCGGGC AGGGCGCCCTGGAGCGGGCGATGGCCGGCGGCACGTCCACGGCGCTCCTC CGCCGCGAGGCAGCGGACGCGCTGATCCACTCCCTCGACGCCTTCGCACT ACAAGACGGGAGGGCGGCGCCGCCGTTCGGCATCGAAGGCACCTCCAGCG AGAACTGGCGCAAGGCTAGCGAGGCGAGGAAGTACGGCAGCCAGCAGGAC GGCGGTGGGTCTAAAGCAGACGCAGCAACGGTGGCGGCGGCATCGCCAGC CGATAAAGACCGGGACAACGCCGGCGATGATGATGACATCATCGGGGACG TGACGGCAGCGGCCGCGGAGGGGGCGGCGGCGGCGGCGGCGGCGGCCGAA GCAGTTAAGGCAGCGGCCAGGGCCGCGGCGGAGGCGGCGGCGGCTGCGGG CGGGGAAGGCGCGGGCGGGGAAGGGCCGGAGCAGGAGGAGGGGAGTGGAA GAGAGGACAAGAAGATCCTCGGGAGTGGGCCGGTGTGGGAGGAGATGAAG GCTTTGGCGGAGTCGAAGCGAAAACCGCTCAAGGGCGTTCGACGCGTGGT GGTGCAGCCTGGTCAGGTGCGTCCGTGGAGTTGTTGATGTCGCCGGCACC GTTTTTTGTTCGTAGCAGTTATCGCCAAATCGGAGCGCGGGCGTGAAAGT CTTGTCAACATTGCCGCTTATCGGTTGCCAGCGCGCGTCCCAGCCACGGC CTTGACACCCCCGCGCGTGGTTGCTGACGTGGCGTCTGCTGCAATTGCAC GAAGGAAGCAAACATGTGTACTTCGCCCCCGCCAGTCACCACGACACCGC TGATCTTTCCGCATATGTGCGTGCGGCCGTTGTCTGAAAATACTGTAGCG CTCGTACCTGTTGACTGGGCGGCGGGGCTCCGGCAAGAGCTGCGTTCTCA ATCATGCCGTCCTCCACGCCAGGTAAGCTTTTGTTTGGGGTATGTGCACT CACTGTTGTTGCGCCGTATAGTGCTTGTTGCCGCGAGCTGACTGTGACGT ACCGCAGCTGCGAGTGTAGGTATAAAAACGGGCGAAACACAGGGCGTGCT TGTACCTGGATGGTCGCAGGATTGCGCTCTAAGGACTCGAGATTTTGTGA AGGGCAAGCGTTTCATGCTAGAGGAGCCTGTGCCACTCTCTCTCTCTCGC TGTTTTCGGCCTCTCCACGTACTCGCGCTCCTGGCACACGGGTGGGTTCA TTGGTCATGCAGAGGTCTGCAAGCTACGTACCGACAACAATTGTCCTATG GCCATCCTCTCCAACGAACCGCAAAGCTCCCACACGAGAATTGCGTCAGT CTCGCACACAAAGAATTGACTCGTGACCGCTATCTTGGGCTTGAACGAAA CGCTCTCTGATTGTATTCCTTCTGCGTGGATAACTCAATTCATTGAAGAA TCCCCTTTGTTGGCAGAGTAATATCCCGCTCTACACAAGTACACCTGATA TTATTGGGATAACGAGGGCCTCGTGCTGGCCGTTGCTTGTCGGCACAGGT CGACAGGATGGATCGTTCTCTTCGTGCCGGATGGGAGGAACCTGGTCCAG AAGGGGATCTACTGCCAGCCGTCCCCTGTCCTGGAAGGGTTGTACGACCT TCCAGTCCAGGCGAGTCGGGGCTGCTCTTTCACCTCTTGTAGTTAATCGT GTTTGGAACTATTTCGCCGGCCGGCCTTCAGTTGTTGGGGTGTTTTGGAG GTGGCTTATGTTGTGTTTTATGGAGCCCCGTCCTCTGGTTCTCATGAATT TGTTTGCCAAGGGTGCGGCAAGCTGTCTCGGAGATGGGGTACAGAGTGTC ATATTTTTGTAGTCCCAGCCCTATCCGGATCTTGGCGAGGGGTCGAAAGC ATTGGTGAACGCGTCGGAAAAGAGGTCGTTCAGTCTCTGATGATTGTTTT TGGTGTTCGGTTGGCGTTGTAGAGACTCTTTGGCAATGTTGACTTTCGGC CGTCATCGCTTCTTTTTGACCACGTCCATCGGCACACCCGTTTTGTTTTT GCTAACCCCAACACTACGTCTAACCCTAGTTGTCCAAGGTTTGTCGTGCA CACCCCACTGCCCACCGTCTCAACCTCGCTTATCCCATTCCAACCAACGA CTGCACCTCCCCATCCCACGCTCCGTTCCCCCCCGCCTGTCTTGCAGTCT ATGAAGAGGCTCAAGACTCTTCGGGAAGCTCACGGCGACCAGCTCAAGAA CATCAGCATCAAGGACCCCGAGGTACCGTTTCGTGCGTCAGTATTTCATT GCTGATCGTCGTCCCCGTTTTTCCCTAGGGTATGAGGGCGTGGGGAGACC CGCCGCCAACTCGCCCTTGCCGCTGTCCCGCGCGGGTCAGTTGGTGATGG CCTTTCGTCCCCGGCCCCGAGCACGACATTTTCCTCTCTTTTTCTGTTTT TCGTTCCCCCGTGGTTCCTGCAGAGGAGTTCCAACACGCTTGAGGGCGAA GGTCTCTCTACATCTTCGCCCCGCTCTGTAAAGGAAGCTGATAGCGATCC CGCTACGACATGTTTCTCTTTTGTCTTCTTGAGGTTCCCTGCTTCAAATA GGGGTTTCCTTTCTCAGAGTCCACATCCCCCCGACAGCCTGTCCTCACTT TTTTTTCGTGCCTCCCGTGTGTGCAGGTGCTCGGTCGGCACGAGGGCGCT AAGACGCTGCTGGACGTGATGGACATGGGTCTGGCGGACCAAGTAAGAAT CATGTGGAGAACGCGAGGGGGGGGGGGATTCTCATGTGTTGGTTTCGACG GATGGGACCAGCGCGCGTGGCGTGTCGTGGTTGTTTGCGACCAAGCGTAA GTATTTTCTCTCCTGGCCGGAGACCCCGTTGGATCCCCGAGCGTGTGTAC GGAGAGGTTTGTTCCCGTGGCCCTGCCTGCTCTACTGCGGTCGTCTTGGT TTTGGGGGGGTTCTGTCTCATAGTCTTGTGGTTTGGCGTTTTGTGTATGC GATGTCGGTGTGATGCTGAGGTCTGCTTCCTCCCAATGCGCTGTTTGATG CTTAGCGCCTCCTTTTTTTGCATCTCGTCGACGAGACTGCTGTGCTCAGG CTTTCGTCTCTCGCGCGTGACCGCTTTGTGGATTCAAGTTGCGTGTTTTA GGAGCGTGCCCCCATGTGGCCTACCACATCGTCGAGTCGTGCATTTTTGT GTTTCGACGCAGGAACACGCGGGGACGGCTCACTACGACGTGATGAGGGA GTTGCTGGCGACCACGGAGGCGAAGGTGATGCTGGCCATCGACGAGTACA ACGAGCTCTTCCAGATGTCCCAATGGCACTACGGGGACAACAAGGCGAGT GCTGCGGTATCGCGTGCATCGGGAGGGGGGCGGACTTGGGGTTGGCTGTC GCACGAAGACTGCGATGAAAGCGTCTTGGCACTGCTTCTTAGCGCGTGTC AAAAGCCCACCATCCTCGTCGTTTTCGTCTTGCGGCGTGGGTCGGCGTGC ACCCGCTGTCGACGAGACGTTCGCACTTGCAAGAATGAGACCTCTTGGCG TTTGCTGCGTTTAGGTGTTGAGGACTGCCAAATGTGGAAGTACGTTGACC TTCCGAGATGTCGGTTTCAAATCATCCTCCCCTTCTCCCTACCCCTCCCT TTTAACAAAACTGACGTACACAGCTGGAAGCGCCGCACCTCACGGCAACC CTGCCGCTCCTGCCGCCTTTGGTCTCGACCGGCACTGGCCTGGCCTTCGC GGACGACTCGGTGGCGGCCCTTGCCAACCCGGAGGTGGTCGCCGAGAGAA AGAGAACCCCCGCAGAGGCGGGGGGGGTGGCCTGGATGAGCCCGGAGACT GGGGCGGCTTGCCTGCCGCCACCGCCGGCGAACGGCATCGTGGTTTGCGC CGTGTCCGGGAGGTACCCCCCGGTGAAGAGGCTGAGGAAGAACAAGAAGT GGGTCCCGTTCGAGGCCACCGCGGGCCGGCTGGCGCAAGCCGTGTCGGTA AGGGATTTGTTGCAGTTGTAAATTGATGTTGTTGTTGTTGTTGTTGTTGT GTTTTGTTGATGTTGTTCCGTTGAAGAAGGCTTGAGAGGGATTTACACCC TCATTTTTGGGCTTGGAGTTTGGGTTTGCAGCCCACGGCATTAAACAAAT ATACTTTCGGTCAGGGCGGGCTCACCGCACGGCCACCCCTACGAGATGCT CCGTCTCCTTCACCCTACAAGCATCCGCTTGTGCTTGTTCTTGTTACATT AAACACCGTTCCGATGTCTGCTAGGTGCCTTCTTGCACCCGAACTTGTCC AACGACCGCGGATGCCTTCCTTGTGCCCACAGCCCACGTGCCCTAAGGGG ACCCAACGCAATAATCCAAGAGAGAAAATGAACTGGGTCCTTTTTTGTTT TGCCTCGTGCATCGTCTCCTTAGAAGGGCGACGAAAGTATGCTGACAATG GCAGACACTTGGTAGAAACAAGCGCCCTTCCACATCTTTCGTATTAATAA TGTTTTTACGTCCGTTTTTTTCTCCCGTCCACATCGCGCCAACCTGTGCC AGATTCCGGTCGAGCCGTACACCAGGCGCGAGTTCTTACGCGTGTTGAAG CACTACGCCAGGGTAGAAGAGGTCGTCAACGGTAAGAAGCGACCCCCGAC CCGATCTGTGTTGGACGGAACGTAGAGGGAACGAGTAGGCCGGCGGGGCG GGGGGGGGACTGCAAGAAAGTCTCACCGAGTTTTTGTGTCCTGCCGATAC GACCGAAAGAAATCGCACGAATTGCAATCATGAGCGTACGATTTACTCAC ACACCCACAGAATACGAATTATCCTCTGTAGCCGCACTCAAACCGATGTC TTCCGGTTGGTCAGCCGGTTAGCTATCGCGGTCGATTGTGACTCGTAAAT GTAGAAACACAAGCGTCGGCGCGGACACGCACGCAAGCCTCGCTCTTGAC CGGCATACAACATGTTCTCGCGTGTCCGTGGGTTTCTTTCGTCTCTCATG GCACCGCTGTTTTTGTTGCAGAACCGTTGGACACGATGGAGGTGGCGAAG GTGCATGCCAAGTCGGACGGTCTTCCGGAGCACGTGTTCGACACGTGCAG GGCGGGCCGTTACCGCACCGCCGTTCATGAGCAGTAGGCCGTAATTTTTT GTTACTGCGGTCGGCTCTGTGCGACATATCTCGACCACCCCAGGGGTGGC TGACATGCCGCGAACTATTAGTGCTGATGTTGAACAAGTGTTTTGGTCTT GAAGTACGTCTCTGTCTTGGGGGCAAAGTTCGTTTGTGTGAAGCCTTGTA GGTTATCTGGAAGATGGCGGAATGCGCGCGGACATACTGCTGTAGGTGTG CTCTCATCTACAGTCAAACGCGGCAGTGAATCGGGCTGCCCGTGGAATGC TCCACGCGTTTCCCAAATGGTGGCACTGGGCCGCCACGACTTGCTGCGGT ATGTTGTCCCTCGAGAGGAGTGTAAGCATATTACGCATGTTGCGTGGTAA CGTATGTTGTGTGGTAACGCCTGATGCGTGGCATGCTGTCGGTGAAGCCT GCTGCTGTTGAGATTGATTCCGAGTTCGGGCAGGTCAGCCAGCATCCGAA TGGTTGTAATGTGTTCGGCGAAGTTGTTGGGTTCGTCTGTGATGCTAGGG GATGACCCGCCTCAGAGTCCATGTAATGCAACACGAGCATGTGCTGAATC ATTCGCGTGTTCTGGAGAACCTGCGGTTCAGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1840:457..7389-

>mRNA_Ecto-sp13_S_contig1840.5719.1 ID=mRNA_Ecto-sp13_S_contig1840.5719.1|Name=mRNA_Ecto-sp13_S_contig1840.5719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2058bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1840:457..7389- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGACTAGGGTTGGGTTGATTCGGGCCCGGGGCCATTCATGTAGGGC
TCAACTCGTGCACGGCCAGCTGCAGAGCTCGATCAGCGGTGTGCGGTTGC
TGGCCCGCCTCTCTTCCTCCTCTTCACGCAGCACTGCTCTCAAGGGCAGC
GCCAGCGGCAGCAGCAGCAGTGCTCCGTTAGCGTTTTTCCCTCGCGCTCG
TAGAAACCAGTACCCCGCATCGTCTCTTTTCCTGGGGAGAAGAGACAGCG
TTAGTGGCGGCAAGGCTCTGTTTTCGTCGACTACAGCAACCAGGCCTGCT
CAAGAGGAAGGAGCTGCGCAGGACTCGGACCCGGGCCACAGCAGCAGAAG
CAGCAACAACAACAAACCCGGGCGAAAGACGTTTGATGGGGAAGACAACG
ACGACAGGCTCGCTAGGCTGGACGATGGGGATAAGTACGAGGACTTCTTC
GACCTTCGGTTAGCGGAGGCGGAGACCATCTTCCCGGAGGGCCTCGCTGG
CGGCGGGCAGGGCGCCCTGGAGCGGGCGATGGCCGGCGGCACGTCCACGG
CGCTCCTCCGCCGCGAGGCAGCGGACGCGCTGATCCACTCCCTCGACGCC
TTCGCACTACAAGACGGGAGGGCGGCGCCGCCGTTCGGCATCGAAGGCAC
CTCCAGCGAGAACTGGCGCAAGGCTAGCGAGGCGAGGAAGTACGGCAGCC
AGCAGGACGGCGGTGGGTCTAAAGCAGACGCAGCAACGGTGGCGGCGGCA
TCGCCAGCCGATAAAGACCGGGACAACGCCGGCGATGATGATGACATCAT
CGGGGACGTGACGGCAGCGGCCGCGGAGGGGGCGGCGGCGGCGGCGGCGG
CGGCCGAAGCAGTTAAGGCAGCGGCCAGGGCCGCGGCGGAGGCGGCGGCG
GCTGCGGGCGGGGAAGGCGCGGGCGGGGAAGGGCCGGAGCAGGAGGAGGG
GAGTGGAAGAGAGGACAAGAAGATCCTCGGGAGTGGGCCGGTGTGGGAGG
AGATGAAGGCTTTGGCGGAGTCGAAGCGAAAACCGCTCAAGGGCGTTCGA
CGCGTGGTGGTGCAGCCTGGTCAGCGCTCGTACCTGTTGACTGGGCGGCG
GGGCTCCGGCAAGAGCTGCGTTCTCAATCATGCCGTCCTCCACGCCAGGT
CGACAGGATGGATCGTTCTCTTCGTGCCGGATGGGAGGAACCTGGTCCAG
AAGGGGATCTACTGCCAGCCGTCCCCTGTCCTGGAAGGGTTGTACGACCT
TCCATCTATGAAGAGGCTCAAGACTCTTCGGGAAGCTCACGGCGACCAGC
TCAAGAACATCAGCATCAAGGACCCCGAGGTGCTCGGTCGGCACGAGGGC
GCTAAGACGCTGCTGGACGTGATGGACATGGGTCTGGCGGACCAAGAACA
CGCGGGGACGGCTCACTACGACGTGATGAGGGAGTTGCTGGCGACCACGG
AGGCGAAGGTGATGCTGGCCATCGACGAGTACAACGAGCTCTTCCAGATG
TCCCAATGGCACTACGGGGACAACAAGGCGAGTGCTGCGCTGGAAGCGCC
GCACCTCACGGCAACCCTGCCGCTCCTGCCGCCTTTGGTCTCGACCGGCA
CTGGCCTGGCCTTCGCGGACGACTCGGTGGCGGCCCTTGCCAACCCGGAG
GTGGTCGCCGAGAGAAAGAGAACCCCCGCAGAGGCGGGGGGGGTGGCCTG
GATGAGCCCGGAGACTGGGGCGGCTTGCCTGCCGCCACCGCCGGCGAACG
GCATCGTGGTTTGCGCCGTGTCCGGGAGGTACCCCCCGGTGAAGAGGCTG
AGGAAGAACAAGAAGTGGGTCCCGTTCGAGGCCACCGCGGGCCGGCTGGC
GCAAGCCGTGTCGATTCCGGTCGAGCCGTACACCAGGCGCGAGTTCTTAC
GCGTGTTGAAGCACTACGCCAGGGTAGAAGAGGTCGTCAACGAACCGTTG
GACACGATGGAGGTGGCGAAGGTGCATGCCAAGTCGGACGGTCTTCCGGA
GCACGTGTTCGACACGTGCAGGGCGGGCCGTTACCGCACCGCCGTTCATG
AGCAGTAG
back to top