mRNA_Ecto-sp13_S_contig18362.5701.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18362.5701.1
Unique NamemRNA_Ecto-sp13_S_contig18362.5701.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5J7W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7W8_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 3.830e-139
Identity = 279/306 (91.18%), Postives = 284/306 (92.81%), Query Frame = 1
Query:   10 QAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
            QAVHSRVTPH GTQQG+PPGAVMMPGFSDDADRQARQAALVKVLNDK+FGDAPQK WTESESG  XXXXX        SNVS+EDSSAPSD GSQSGDVVFEKEIREAMTG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKK  G+DYPHWATHFLKRTC HRKIPRMSQKSKG LVAALRSLDANMKRPSPYFDDLDAI AGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKE+TPELEDS   XXXXXXXXXXXXXXXXXXSGSITER
Sbjct:   55 QAVHSRVTPHTGTQQGIPPGAVMMPGFSDDADRQARQAALVKVLNDKRFGDAPQKKWTESESGGXXXXXXXXXXXXXXSNVSLEDSSAPSDSGSQSGDVVFEKEIREAMTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKDRGKDYPHWATHFLKRTCGHRKIPRMSQKSKGVLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITER 360          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 1.140e-137
Identity = 279/306 (91.18%), Postives = 285/306 (93.14%), Query Frame = 1
Query:   10 QAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
            QAVHSRVTP  GTQQG+PPGAVMMPGFSDDADRQARQAALVKVLNDK+FGDAPQK WTESESG DXXXXX        SNVS+EDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKK  G+DYPHWATHFLKRTC HRKIPRMSQKSKG LVAALRSLDANMKRPSPYFDDLDAI AGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEG+DYSV DLYDAMEKE+TPELEDS   XXXXXXXXXXXXXXXXXXSGSITER
Sbjct:   55 QAVHSRVTPLTGTQQGIPPGAVMMPGFSDDADRQARQAALVKVLNDKRFGDAPQKKWTESESGGDXXXXXXXXXXXXXSNVSLEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKDRGKDYPHWATHFLKRTCGHRKIPRMSQKSKGVLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITER 360          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JWQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ7_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 2.500e-132
Identity = 271/307 (88.27%), Postives = 278/307 (90.55%), Query Frame = 1
Query:   10 QAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
            QAVHSRVTPH GTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDK+FGDAPQK+WTESESGD XXXXX      GSSNVSVEDSSA SDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKA G+DYPHWATHFLKR CAHRKIPRMSQK+K  LVA LR LDANMKRPS +FDDLDAI A K G GSEQEEGEE G IPA+ LLMFRGV+NMVALARDRT PFTVEGVDYSVADLYDAMEKED PELEDS  XXXXXXXXXXXXXXXXX  SGSITER
Sbjct:   55 QAVHSRVTPHTGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKRFGDAPQKNWTESESGDXXXXXXXXXXXXGSSNVSVEDSSALSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKARGKDYPHWATHFLKRICAHRKIPRMSQKTKDVLVATLRPLDANMKRPSTHFDDLDAIAASKPGHGSEQEEGEEEGAIPARTLLMFRGVVNMVALARDRTGPFTVEGVDYSVADLYDAMEKEDKPELEDSAGXXXXXXXXXXXXXXXXXEGSGSITER 361          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 8.320e-101
Identity = 183/262 (69.85%), Postives = 196/262 (74.81%), Query Frame = 1
Query:   67 GAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSG--RGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDS 843
            GA MMPGFSDDA RQARQAA+ KVLNDK+F DAPQ++W+ESESGDD     GSP S+GSSNVS+EDSSAPSDI SQSGDVVFEKEIREAMTGG                                AS+KKA G+DYPH ATHFLKRTCAHRKIPRM Q SK  LVAALRSLDANMKR SPYFDDLDAI AGKSG  RGSEQEEGEE   IPAKA+  FRGV+NMVA ARD TEPF  E VDYSVA+L+DAME ED PEL DS
Sbjct:   43 GAGMMPGFSDDAARQARQAAVAKVLNDKRFCDAPQRNWSESESGDDNDGE-GSPTSSGSSNVSIEDSSAPSDICSQSGDVVFEKEIREAMTGGGGAGARTKNHGKRKASAGGSVVGKYKAAASHHASSKKARGKDYPHLATHFLKRTCAHRKIPRMWQSSKDLLVAALRSLDANMKRSSPYFDDLDAIAAGKSGCGRGSEQEEGEEEAAIPAKAMPTFRGVVNMVAQARDSTEPFIFEDVDYSVANLFDAME-EDKPELGDS 302          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5K9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E4_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 4.980e-97
Identity = 180/285 (63.16%), Postives = 184/285 (64.56%), Query Frame = 1
Query:   76 MMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
            MMPGFSDDADRQARQAALVK                             S +   SSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGG                                ASAKKA G+DYPHWATHFLKRTCAHRKIPR SQK K  LV ALRS DANMK PSPYFDDLDAI AG+SGRGSEQEEGEE G IPAKALLM RGV+NMVALARDRTEPFTVEGVD SVADLYDAMEKE  PELEDS                     SGSITER
Sbjct:    1 MMPGFSDDADRQARQAALVK-----------------------------SDVKWQSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGGGAGTRTTNHGKREASACGSVVGKNKAAASHHASAKKARGKDYPHWATHFLKRTCAHRKIPRKSQKIKDVLVVALRSFDANMKWPSPYFDDLDAIAAGESGRGSEQEEGEEEGAIPAKALLMLRGVVNMVALARDRTEPFTVEGVDCSVADLYDAMEKEAKPELEDSAGGTGG---------------SGSITER 241          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JT27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT27_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 1.450e-92
Identity = 190/214 (88.79%), Postives = 197/214 (92.06%), Query Frame = 1
Query:    1 MARQAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGK 642
            MARQAVHSRVTP  GTQQG+PPGAVMMPGFSD+A+RQARQAALVKVLNDK+FGDAPQK WTESESG DXXXXX        SNVS+EDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKK  G+DYPHWATHFLKRTC HRKIPRMSQKSKG LVAALRSLDANMKRPSPYFDDLDAI AG+
Sbjct:    1 MARQAVHSRVTPLTGTQQGIPPGAVMMPGFSDNANRQARQAALVKVLNDKRFGDAPQKKWTESESGGDXXXXXXXXXXXXXSNVSLEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKDRGKDYPHWATHFLKRTCGHRKIPRMSQKSKGVLVAALRSLDANMKRPSPYFDDLDAIAAGE 214          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 5.140e-84
Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 1
Query:  442 ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
            ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKE+TPELEDS   XXXXXXXXXXXXXXXXXXSGSITER
Sbjct:   37 ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITER 198          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5JD97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD97_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 5.400e-82
Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 1
Query:  442 ASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDTPELEDSXXXXXXXXXXXXXXXXXXXXXSGSITER 927
            ASAKKA G+DYPHWATHFLKRTCAHRKIPRMSQ+SKG LVAALR LDANMKRPSPYFDDLDAI AGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKED PELEDS  XXXXXXXXXXXXXXXXXXXSG+ITER
Sbjct:   37 ASAKKARGKDYPHWATHFLKRTCAHRKIPRMSQRSKGVLVAALRPLDANMKRPSPYFDDLDAIAAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKEDKPELEDSAGXXXXXXXXXXXXXXXXXXXSGNITER 198          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5KIT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIT8_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 1.390e-81
Identity = 178/279 (63.80%), Postives = 188/279 (67.38%), Query Frame = 1
Query:   10 QAVHSRVTPHAGTQQGVPPGAVMM--PGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQSGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEE-GVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYS-VADLYDAMEKEDTPEL 834
            QAVHSRVTP  GTQ G   G+      G   DADRQA QAALV+VLNDK+FGDAP K+WTESESGDD                  +D                           XXXXXXXXXXXXXXX         X       ASAKKA G+DYPH ATHFLKRTCAHR+IPRMSQKSK  LVAALRSLDANMKRPSPYFDDLDAI AGKSGRGSEQE GEE G IPA ALLMFRGV+N VALARDRTEPFTVEGVDYS VADL+DAMEK+D  EL
Sbjct:   55 QAVHSRVTPRTGTQHG---GSTWRGDDGGLLDADRQAGQAALVRVLNDKRFGDAPHKNWTESESGDD------------------DDEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKTKILLCXKAAASHHASAKKARGKDYPHSATHFLKRTCAHRQIPRMSQKSKDVLVAALRSLDANMKRPSPYFDDLDAIAAGKSGRGSEQEGGEEEGAIPANALLMFRGVVNTVALARDRTEPFTVEGVDYSSVADLFDAMEKDDKLEL 312          
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.230e-80
Identity = 162/320 (50.62%), Postives = 189/320 (59.06%), Query Frame = 1
Query:    1 MARQAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDKQFGDAPQKSWTESESGDDXXXXXGSPMSTGSSNVSVEDSSAPSDIGSQ------SGDVVFEKEIREAMTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAKKALGRDYPHWATHFLKRTCAHRKIPRMSQKS-KGFLVAALRSLDANMKRPSPYFDDLDAIVAG---------------------------------------KSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKED 822
            M RQAVHSRVTPH  TQQGVPPGA +MPG  D    +AR+ A+  +LNDKQFG+A  K+W+ES+S DD      +PMS+GSSNVSVE+SSAPSDI SQ      SGD VF KEIREA+ GG                                ASAKKA G+DYP WA H L+RTCAHRKIPRMS++  K  LV ALRS D NM RPSPY+DDL+AI AG                                       KSGR + +E+ EEG IPAKALL FR V+ MVA+ARD   PF V+ V+YS  DLYDA+ KED
Sbjct:   54 MVRQAVHSRVTPHTDTQQGVPPGAGLMPGLMDTEGTKARRVAVSMILNDKQFGEASGKNWSESDSSDDDNGKD-APMSSGSSNVSVEESSAPSDIISQEPGDVESGDSVFAKEIREAIFGGGGAGRKKTHGKRKASAGGSAVGNRNSTKASLGASAKKARGKDYPLWAAHLLRRTCAHRKIPRMSKEGDKHVLVQALRSHDGNMNRPSPYYDDLNAITAGNMRNMEFCSGWGCTPEASSHAKAYSLCGPLSPIPNARAGKSGRSNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSKVPFKVDNVEYSAVDLYDALAKED 372          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18362.5701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7W8_9PHAE3.830e-13991.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFU0_9PHAE1.140e-13791.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWQ7_9PHAE2.500e-13288.27Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN7_9PHAE8.320e-10169.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9E4_9PHAE4.980e-9763.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT27_9PHAE1.450e-9288.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZX9_9PHAE5.140e-8497.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD97_9PHAE5.400e-8293.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIT8_9PHAE1.390e-8163.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKV3_9PHAE1.230e-8050.63Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18362contigEcto-sp13_S_contig18362:1473..2908 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score244.6
Seed ortholog evalue6.1e-62
Seed eggNOG ortholog2880.D7FIC6
Model size928
Hectar predicted targeting categoryother localisation
Exons2
EggNOG OGs2EJXG@1,2SPZB@2759
Cds size927
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462944.6270764-CDS-Ecto-sp13_S_contig18362:1472..21091681462944.6270764-CDS-Ecto-sp13_S_contig18362:1472..2109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18362 1473..2109 +
1681462944.6383038-CDS-Ecto-sp13_S_contig18362:2618..29081681462944.6383038-CDS-Ecto-sp13_S_contig18362:2618..2908Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18362 2619..2908 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18362.5701.1prot_Ecto-sp13_S_contig18362.5701.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18362 1473..2908 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18362.5701.1

>prot_Ecto-sp13_S_contig18362.5701.1 ID=prot_Ecto-sp13_S_contig18362.5701.1|Name=mRNA_Ecto-sp13_S_contig18362.5701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp
MARQAVHSRVTPHAGTQQGVPPGAVMMPGFSDDADRQARQAALVKVLNDK
QFGDAPQKSWTESESGDDDDEGGGSPMSTGSSNVSVEDSSAPSDIGSQSG
DVVFEKEIREAMTGGGGAGTRTTNHGKRKASAGGSVGGKNKAAASHHASA
KKALGRDYPHWATHFLKRTCAHRKIPRMSQKSKGFLVAALRSLDANMKRP
SPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDR
TEPFTVEGVDYSVADLYDAMEKEDTPELEDSAGGSSSTGGAAGPDGGGSA
GGSGSITER
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mRNA from alignment at Ecto-sp13_S_contig18362:1473..2908+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18362.5701.1 ID=mRNA_Ecto-sp13_S_contig18362.5701.1|Name=mRNA_Ecto-sp13_S_contig18362.5701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1436bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18362:1473..2908+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCCGCCAGGCCGTTCACAGCAGGGTTACCCCCCATGCCGGTACACA ACAGGGGGTGCCACCTGGCGCGGTGATGATGCCGGGCTTCTCGGACGACG CTGATCGGCAAGCTCGTCAGGCGGCCTTAGTAAAGGTTCTGAACGACAAG CAATTTGGCGACGCCCCACAAAAAAGTTGGACTGAGTCGGAGAGCGGCGA CGACGACGACGAGGGGGGGGGCAGCCCGATGTCAACTGGTAGCAGCAATG TGTCGGTAGAGGACAGTTCAGCTCCGTCGGATATTGGCTCACAGTCGGGA GATGTCGTGTTCGAAAAGGAAATTCGGGAAGCAATGACCGGGGGAGGGGG AGCGGGCACGAGGACCACAAACCACGGCAAGCGGAAGGCGAGCGCCGGCG GCAGCGTCGGAGGGAAGAACAAAGCAGCAGCATCCCATCACGCGAGTGCC AAAAAAGCCCTGGGCAGGGATTACCCGCACTGGGCCACACACTTTCTGAA GAGGACATGCGCGCACCGCAAGATCCCGAGGATGTCGCAGAAGAGCAAGG GTTTCCTGGTGGCGGCCCTGCGATCTCTCGACGCCAACATGAAACGGCCA TCTCCGTACTTCGACGACCTCGATGCTATCGTAGCCGGTGAGATGCTGGT ATTGTGTGGATTAGTCGTCTATTAGAGTCCCAGCAGACGGCACAGAGTAT CGACAACATATAGGTAGTTACTCTGCAGTTGAACGCAGTGTGCGCAGAGG AAACAAAACAAAATTACTGCTGTGTGTGTGTAGTGCCCGCTTCAAATCAA CCTATTTGTACAGAGTAGCAGATAAATTACGGCATGCTCGAGAGCTGTTT TTTTTGCCCCAAGTAGGTGGGGTATTGAAGGCACTCACAGCGTACCACAC GGCATACTTTCTTGATTATAGTCAATCGGTGGTGCACCGACCAATACGGT AAATCTTTGGGTGTTCTGTCCTCTCACGCCCAGAGGAAGTAAGGTAAGGT GAACGATGTTTTGTGGAAGACAGTCGCCAGGAATATGTACAATTTTGCCA AATTCGGGCGTGTACACCTGAGGCTTCCTCTCATGCGAAGGCGTATTCGT TGTCTCGGCCGCTTTCTCATATCCGGGCGTTCGGGCGTTCGCGCAGGCAA ATCTGGACGCGGCAGCGAGCAGGAGGAGGGGGAGGAGGGAGTCATCCCGG CGAAAGCGCTGCTTATGTTTCGAGGCGTTATCAACATGGTCGCCCTAGCA CGTGACAGAACTGAACCGTTTACAGTCGAGGGTGTGGACTACAGTGTGGC GGACCTTTACGACGCCATGGAGAAGGAAGACACACCGGAACTGGAGGATT CTGCCGGCGGGAGTTCGTCGACGGGTGGTGCAGCCGGACCGGACGGGGGT GGTTCCGCCGGAGGAAGTGGCAGCATCACGGAGCGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18362:1473..2908+

>mRNA_Ecto-sp13_S_contig18362.5701.1 ID=mRNA_Ecto-sp13_S_contig18362.5701.1|Name=mRNA_Ecto-sp13_S_contig18362.5701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=927bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18362:1473..2908+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCCGCCAGGCCGTTCACAGCAGGGTTACCCCCCATGCCGGTACACA
ACAGGGGGTGCCACCTGGCGCGGTGATGATGCCGGGCTTCTCGGACGACG
CTGATCGGCAAGCTCGTCAGGCGGCCTTAGTAAAGGTTCTGAACGACAAG
CAATTTGGCGACGCCCCACAAAAAAGTTGGACTGAGTCGGAGAGCGGCGA
CGACGACGACGAGGGGGGGGGCAGCCCGATGTCAACTGGTAGCAGCAATG
TGTCGGTAGAGGACAGTTCAGCTCCGTCGGATATTGGCTCACAGTCGGGA
GATGTCGTGTTCGAAAAGGAAATTCGGGAAGCAATGACCGGGGGAGGGGG
AGCGGGCACGAGGACCACAAACCACGGCAAGCGGAAGGCGAGCGCCGGCG
GCAGCGTCGGAGGGAAGAACAAAGCAGCAGCATCCCATCACGCGAGTGCC
AAAAAAGCCCTGGGCAGGGATTACCCGCACTGGGCCACACACTTTCTGAA
GAGGACATGCGCGCACCGCAAGATCCCGAGGATGTCGCAGAAGAGCAAGG
GTTTCCTGGTGGCGGCCCTGCGATCTCTCGACGCCAACATGAAACGGCCA
TCTCCGTACTTCGACGACCTCGATGCTATCGTAGCCGGCAAATCTGGACG
CGGCAGCGAGCAGGAGGAGGGGGAGGAGGGAGTCATCCCGGCGAAAGCGC
TGCTTATGTTTCGAGGCGTTATCAACATGGTCGCCCTAGCACGTGACAGA
ACTGAACCGTTTACAGTCGAGGGTGTGGACTACAGTGTGGCGGACCTTTA
CGACGCCATGGAGAAGGAAGACACACCGGAACTGGAGGATTCTGCCGGCG
GGAGTTCGTCGACGGGTGGTGCAGCCGGACCGGACGGGGGTGGTTCCGCC
GGAGGAAGTGGCAGCATCACGGAGCGC
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