mRNA_Ecto-sp13_S_contig18256.5658.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A6H5KLB1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLB1_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 2.240e-139 Identity = 213/248 (85.89%), Postives = 223/248 (89.92%), Query Frame = 1
Query: 1 MEPITGFQGLMAAGGAGVPPGGVAAATGAPHQMIPTVSGDSGEDSVSNDDKRKTEMAKERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAATLQKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGPPAVPAAASGSVGDNQPSRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDA 744
MEPITGFQGLMAAGGAGVPPGGVA AT APHQ+IPTVSGDSGEDSVSND KRKTEMAKERNRLHARNTRARKKQYMEELKDKVESLHAKRA+AEH KE R +EE+IARWAATL+ VLDLRC+GVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERC Q+GGL PP QP RPRVHLKSCVS+GD+VFSSD+GIMCVFSMTTVDA
Sbjct: 1 MEPITGFQGLMAAGGAGVPPGGVAGATVAPHQIIPTVSGDSGEDSVSNDCKRKTEMAKERNRLHARNTRARKKQYMEELKDKVESLHAKRAAAEHNKEXXXREDEEKIARWAATLKNVLDLRCQGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQKGGLSPPXXXXXXXXXXXXXQPPRPRVHLKSCVSNGDMVFSSDRGIMCVFSMTTVDA 248
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.380e-31 Identity = 76/199 (38.19%), Postives = 115/199 (57.79%), Query Frame = 1
Query: 148 DKRKTEMAKERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAATLQKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGPPAVPAAASGSVGDNQPSRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDA 744
D+ + + +ERNR+HARNTRARKK Y +EL K+ +L ++ E + A++ Q + WAATL++ +DLR G +D A W+++L EDF++++P+TPYR F P+DV RR VL+GV+GM++DTASL M +N+ + + G R RV + + F G+MC F M T+DA
Sbjct: 50 DEERKKQERERNRMHARNTRARKKAYADELTAKLAALTKEKEEHEKAEAEASKARTVQQSAWAATLRQAMDLRAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRR-VLLGVDGMVADTASLQVMLDNIGTKTRKNEG--------------------RVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDA 227
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE) HSP 1 Score: 103 bits (258), Expect = 5.850e-22 Identity = 76/194 (39.18%), Postives = 108/194 (55.67%), Query Frame = 1
Query: 166 MAKERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHR-KEAAARGEEEQIARWAATLQKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGPPAVPAAASGSVGDNQPSRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDA 744
M +ERNR AR +R KKQ ++++ ++ L + A A R KEAA + ++ + AR A L+KV DLR +G D A W EVL+ D +++P+TPYR F+PADV RR VL+GV+GMISDT SL+ + +N+ + P + L S G FS D G+MC F+M T+DA
Sbjct: 93 MDRERNRRQARKSRELKKQCADKMQQQLIQLEKESAEAAAREKEAAKKLKDCRTARCQA-LRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRR-VLLGVDGMISDTQSLSVLLDNIGVKTRLY------------------ESPVSIKFTLASDADEGGAFFSRD-GLMCSFTMRTLDA 265
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A7S2DGM6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGM6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.380e-17 Identity = 60/150 (40.00%), Postives = 83/150 (55.33%), Query Frame = 1
Query: 172 KERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAATL----------QKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGP 591
KERNR HARN+R RKK ++E+L+ L K E +Q+ R AATL Q++L R +G + P W+ +L EDF +LP+TPYR F+P ++ R VL GVEG+I DTASL ++ ++ R H RG P
Sbjct: 82 KERNRTHARNSRLRKKAHVEKLQRTALILSCKNEQMER----------QQMERMAATLDIQATQRAMVQRLLYYRVQGCIVPGYWHRILAEDFTFTLPVTPYRYFNPGEISRSGR-VLYGVEGIIRDTASLAQLFLSVGPR-HHRGSFKP 219
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A7S2DGD5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGD5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 4.930e-17 Identity = 60/150 (40.00%), Postives = 83/150 (55.33%), Query Frame = 1
Query: 172 KERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAATL----------QKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGP 591
KERNR HARN+R RKK ++E+L+ L K E +Q+ R AATL Q++L R +G + P W+ +L EDF +LP+TPYR F+P ++ R VL GVEG+I DTASL ++ ++ R H RG P
Sbjct: 82 KERNRTHARNSRLRKKAHVEKLQRTALILSCKNEQMER----------QQMERMAATLDIQATQRAMVQRLLYYRVQGCIVPGYWHRILAEDFTFTLPVTPYRYFNPGEISRSGR-VLYGVEGIIRDTASLAQLFLSVGPR-HHRGSFKP 219
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A7S3YIB3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB3_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 5.690e-17 Identity = 63/191 (32.98%), Postives = 99/191 (51.83%), Query Frame = 1
Query: 172 KERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAATLQKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGPPAVPAAASGSVGDNQPSRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDA 744
++RNR HARNTR RKK +++ELK +V+ L A R E + ++ L LD R GV D ++W+ +L E F + +PLTPYR F + V+ G R+V G+E +++D ASL M +NL + + + P+ PRV +K ++ +L+ D IM ++M T +A
Sbjct: 121 RDRNREHARNTRLRKKAFVDELKKQVQDLAAAREREERERHLESQRSAAMNEIRFQVLATFLDYRGRGVKDLSLWSSILDEQFMMRMPLTPYRSFPQSQVQDGARKVK-GIEDVLADVASLQVMLDNLGKNTEKWKQV--------------TKSPNTPRVEMKYKINQKELLVQGDM-IMANWNMQTSNA 295
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A7S2B104_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B104_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 8.420e-17 Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 172 KERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAATLQKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAER 564
++RNR HARNTR RKK Y+E+LK V+ L + + + E E + + +Q++++ R GVV+P W VL +DF ++LP+TP+R F+P +V G RR V+ GV GMI DTAS + ++ R
Sbjct: 251 RDRNREHARNTRLRKKAYIEKLKQTVQVLSKECETITRDNQQDEVNETEILEQRHQVIQRMMNYRTSGVVNPEKWQAVLAQDFTMTLPITPHRFFNPNEVVGCRR-VVRGVSGMIQDTASFKVLISSIGRR 380
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.450e-16 Identity = 73/197 (37.06%), Postives = 100/197 (50.76%), Query Frame = 1
Query: 157 KTEMAKERNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEA-AARGEEEQIARWAATLQKVLDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGPPAVPAAASGSVGDNQPSRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDA 744
K E +++RNR HARNTR RKK Y+EEL+ V+ L A+R +A K A AR + Q R++ LQ L R G A W L E F LP+TPYR F A+V G+R ++VG++ MI+D ASL M E SVG +PS RV ++ D + S D + C + + T +A
Sbjct: 113 KAEASRDRNRKHARNTRLRKKAYIEELERTVQQLTAERDAAAAAKAAEGARAAQLQSVRFSV-LQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQR-MIVGIDAMIADVASLALMVE-----------------------SVGRCRPSERRVQVQYYAGPEDAITSGDM-LSCRWMLRTENA 283
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: A0A6H5KRD8_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD8_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 7.110e-16 Identity = 67/164 (40.85%), Postives = 91/164 (55.49%), Query Frame = 1
Query: 157 KTEMAKE---RNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAAT-LQKVLDL-----RCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGPPAVPAAASGS 621
K E AK+ RNR HARNTR RKK ++EELK +VE L S R+E R EE ++A LQ +L RCE + W VL E FE+ +P+TPYR F P V+GG+R V+ G++G+I+DT SL+ + + Q PA P+A + S
Sbjct: 261 KEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEEL----VSGREREEMDRRAEERRVASLREIRLQVLLTFLEYRGRCE--LGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKR-VIKGLDGVIADTLSLSVATKGPSPSGRQSRPEELPAAPSATANS 417
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Match: D7G007_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G007_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 3.420e-15 Identity = 65/168 (38.69%), Postives = 91/168 (54.17%), Query Frame = 1
Query: 157 KTEMAKE---RNRLHARNTRARKKQYMEELKDKVESLHAKRASAEHRKEAAARGEEEQIARWAATLQKV--------LDLRCEGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCHQRGGLGPPAVPAAASGSVG 627
K E AK+ RNR HARNTR RKK ++EELK +VE L S R+E R E AR A+L+++ L+ R + W VL E FE+ +P+TPYR F P V+GG+R V+ G++G+I+DT SL+ + + Q PA P+ + S G
Sbjct: 40 KEERAKQNRDRNREHARNTRLRKKAFVEELKKQVEEL----VSGREREEMDQRAE----ARRVASLREIRLQVLLTFLEYRGRCELGRKEWQSVLDEQFEMQMPITPYRSFPPQQVQGGKR-VIKGLDGVIADTLSLSVATKGPSPSGRQSSREERPASPSPTASSRG 198 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18256.5658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18256.5658.1 >prot_Ecto-sp13_S_contig18256.5658.1 ID=prot_Ecto-sp13_S_contig18256.5658.1|Name=mRNA_Ecto-sp13_S_contig18256.5658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp MEPITGFQGLMAAGGAGVPPGGVAAATGAPHQMIPTVSGDSGEDSVSNDDback to top mRNA from alignment at Ecto-sp13_S_contig18256:82..3246- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18256.5658.1 ID=mRNA_Ecto-sp13_S_contig18256.5658.1|Name=mRNA_Ecto-sp13_S_contig18256.5658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18256:82..3246- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18256:82..3246- >mRNA_Ecto-sp13_S_contig18256.5658.1 ID=mRNA_Ecto-sp13_S_contig18256.5658.1|Name=mRNA_Ecto-sp13_S_contig18256.5658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18256:82..3246- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |