mRNA_Ecto-sp13_S_contig18146.5600.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: D8LNM2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM2_ECTSI) HSP 1 Score: 147 bits (372), Expect = 1.520e-39 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAIEK 228
VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAIEK
Sbjct: 674 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAIEK 749
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: A0A6H5K3V2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V2_9PHAE) HSP 1 Score: 144 bits (362), Expect = 3.370e-38 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAIEK 228
VVELVMEVMLLRQNSIEHRLKVLFT+GDENGDGVLSFEEFNRI+LRAAPHFSERRTLRMFREA TAGKEGTYAIEK
Sbjct: 609 VVELVMEVMLLRQNSIEHRLKVLFTDGDENGDGVLSFEEFNRIVLRAAPHFSERRTLRMFREAQTAGKEGTYAIEK 684
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: A0A835Z527_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z527_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.030e-25 Identity = 50/76 (65.79%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAIEK 228
V+++VMEV+ ++Q++I RLK LF EGD+NGDGVLSFEEFN I+ AP FSERR LRMFREALT+G E ++AIEK
Sbjct: 99 VLQVVMEVLTMQQSAITARLKRLFVEGDDNGDGVLSFEEFNAIVTNVAPDFSERRILRMFREALTSGAESSFAIEK 174
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: A0A7S3XVU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVU4_HETAK) HSP 1 Score: 95.9 bits (237), Expect = 2.570e-21 Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAIEK 228
V+ELVMEVM L++N+I L LF EGD+NGDGVLSF EF I+ +AAP FSERR LRMFREALT+G E +++I K
Sbjct: 188 VLELVMEVMALQENNIAANLGKLFVEGDDNGDGVLSFPEFAAIVRKAAPRFSERRILRMFREALTSGPESSFSISK 263
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: A0A1V9YGZ9_9STRA (EF-hand domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGZ9_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.240e-15 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAI 222
V+E++M+V+L+R SIE L LF GD N D VLSF EF II APHF+ERR LRMFREAL G++ +YA+
Sbjct: 663 VLEILMDVLLMRTKSIELELAELFRAGDVNNDQVLSFTEFAAIIKPRAPHFNERRLLRMFREALLLGQDQSYAV 736
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: T0SA94_SAPDV (EF-hand domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SA94_SAPDV) HSP 1 Score: 77.8 bits (190), Expect = 5.860e-15 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAI 222
V+EL+++V+L+R IE L LF GD N D VLSF EF I+ APHF+ERR LRMFREAL G++ +YAI
Sbjct: 586 VLELIVDVLLMRTKGIEMELTELFDSGDVNHDHVLSFAEFCAILQPRAPHFNERRLLRMFREALVLGQDPSYAI 659
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: A0A1V9Y710_9STRA (EF-hand domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y710_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.210e-14 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 7 ELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAI 222
EL++EV+L+R +IE+ L LF GD N D VLSF EF I+ AP F+ERR LRMFREALT G +YAI
Sbjct: 675 ELIIEVLLMRTKTIENELHELFLTGDINHDKVLSFAEFCTILKPRAPGFNERRLLRMFREALTLGSTQSYAI 746
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: A0A067D528_SAPPC (EF-hand domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D528_SAPPC) HSP 1 Score: 73.9 bits (180), Expect = 1.330e-13 Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAI 222
V+EL+++V+L+R IE L LF GD N D VLSF EF I+ AP F+ERR LRMFREAL G++ +YAI
Sbjct: 621 VLELIVDVLLMRTKGIEIELTELFESGDVNHDHVLSFPEFCAILKPRAPEFNERRLLRMFREALLLGQDPSYAI 694
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: A0A485LSS2_9STRA (Aste57867_25289 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSS2_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 8.690e-13 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAI 222
V+EL+M+V+ LR IE L LF GD N D LSF EF ++ PHF+ERR LRMFREA+T G + T+ I
Sbjct: 723 VLELIMDVLQLRNKEIEDELIALFHAGDVNHDQGLSFNEFAALLQPRVPHFNERRILRMFREAVTLGHDETFKI 796
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Match: G4Z3D7_PHYSP (EF-hand domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z3D7_PHYSP) HSP 1 Score: 66.6 bits (161), Expect = 4.990e-11 Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 1 VVELVMEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRTLRMFREALTAGKEGTYAI 222
V++L+M+ + R++ I+ L LF GD N D VL+ +EF II + PHFS+RR LRMFREAL G + ++A+
Sbjct: 646 VLKLLMDALEQRRDGIKRDLTALFDAGDVNHDCVLTLDEFGAIIRKRKPHFSDRRILRMFREALMGGVDQSFAL 719 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18146.5600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18146.5600.1 >prot_Ecto-sp13_S_contig18146.5600.1 ID=prot_Ecto-sp13_S_contig18146.5600.1|Name=mRNA_Ecto-sp13_S_contig18146.5600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp MEVMLLRQNSIEHRLKVLFTEGDENGDGVLSFEEFNRIILRAAPHFSERRback to top mRNA from alignment at Ecto-sp13_S_contig18146:2244..3240+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18146.5600.1 ID=mRNA_Ecto-sp13_S_contig18146.5600.1|Name=mRNA_Ecto-sp13_S_contig18146.5600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=997bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18146:2244..3240+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18146:2244..3240+ >mRNA_Ecto-sp13_S_contig18146.5600.1 ID=mRNA_Ecto-sp13_S_contig18146.5600.1|Name=mRNA_Ecto-sp13_S_contig18146.5600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18146:2244..3240+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |