mRNA_Ecto-sp13_S_contig18132.5594.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18132.5594.1
Unique NamemRNA_Ecto-sp13_S_contig18132.5594.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A6H5JM69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM69_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 9.590e-97
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 1 
Query:   79 ASPPSSGGVAACTEKTSTLAETVAGRASAAASVVAAGTKSSSDAAGKPMSTYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            ASPPSSGGVAACTEKTSTLAETVAGRASAAASVVAAGTKSSSDAAGKP STYADRF RVIGLMDPRHTLTTEADVRRYQRLLKEHRVGE NGALDKELAAAAAK+DASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVY+QV+SHWVNQSLNTAVNYYNR
Sbjct:   36 ASPPSSGGVAACTEKTSTLAETVAGRASAAASVVAAGTKSSSDAAGKPGSTYADRFFRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGEKNGALDKELAAAAAKLDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYIQVISHWVNQSLNTAVNYYNR 200
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: D7FSM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM6_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.040e-58
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 1 
Query:  265 MDPRHTLTTEADVRRYQRLLKEHRVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            MDPRHTLTTEADVRRYQRLLKEHRVGE+NGA DKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIV +MLFNKSVYVQV+SHWVNQSLNTAVNYYNR
Sbjct:    1 MDPRHTLTTEADVRRYQRLLKEHRVGENNGAFDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVTSMLFNKSVYVQVISHWVNQSLNTAVNYYNR 103
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A1Z5J8Z9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8Z9_FISSO)

HSP 1 Score: 78.2 bits (191), Expect = 1.260e-13
Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  226 STYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            S++  RF +++   DPR    TEA VR  Q+LL+ ++  + + ++D+ L  A   V+A+ +  TGEVIP PFR+SG++  N PI  AM+ + S    +   W NQS N  VNY+NR
Sbjct:   68 SSFLGRFSKMLLACDPRLLFYTEAQVREAQKLLESYK--DQDSSMDRALWEAQRIVNAALHPDTGEVIPRPFRMSGYVPYNGPICVAMVASTSTPALLFWSWTNQSQNALVNYFNR 181
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A7S1D055_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D055_CYCTE)

HSP 1 Score: 73.9 bits (180), Expect = 3.300e-12
Identity = 43/115 (37.39%), Postives = 70/115 (60.87%), Query Frame = 1 
Query:  229 TYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            T++ RF R++   DPR  + +EADVRR + L++ +     +  +D+ L  A    +++ +  TG+VIP PFR+SG++  N PI  AM+ ++S    ++  W NQS N  +NYYNR
Sbjct:   33 TFSGRFARMLLACDPRLLIYSEADVRRCEDLVRNYESLPPS--MDRSLWEAKRIYESAIHPDTGDVIPRPFRMSGYVPFNGPICVAMVASQSTLPILLWSWANQSQNALMNYYNR 145
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A2R5GB23_9STRA (Sideroflexin-5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GB23_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.610e-12
Identity = 42/117 (35.90%), Postives = 67/117 (57.26%), Query Frame = 1 
Query:  223 MSTYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            +ST   RF + +   DP   L  E ++R  + LL++   G+   A + +L +A   V+A+    T E+IP PFR+SG++  N P+  AM+ ++S    +  +WVNQS N  VNY+NR
Sbjct:   46 LSTMQGRFAKQLTNCDPSLLLAREQEIRAAEGLLRDFSEGKAANASNSQLWSARKLVEATVQPDTKEIIPRPFRMSGYVPFNGPVCVAMMASQSTPALLFWNWVNQSQNALVNYFNR 162
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A7S4D3Q6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4D3Q6_9EUGL)

HSP 1 Score: 71.6 bits (174), Expect = 2.170e-11
Identity = 44/117 (37.61%), Postives = 68/117 (58.12%), Query Frame = 1 
Query:  226 STYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEH-RVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            +T+  RF +++ L +P H L T+  V   +  LKE+ R G   G  D+EL AA +   ++ +  TG++IP P R+SGFLV N PI  A +   S    ++ HW+NQ+ +  +NY NR
Sbjct:   31 NTFGGRFRKMLDLTNPMHLLATKRQVLEARDRLKEYERSGCVVGVSDEELWAARSLTASAIHPDTGDLIPRPLRMSGFLVFNAPICLAAVLATSYPSILLVHWLNQTHSALINYANR 147
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A7I8VLJ2_9ANNE (Sidoreflexin n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VLJ2_9ANNE)

HSP 1 Score: 70.5 bits (171), Expect = 5.290e-11
Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = 1 
Query:  226 STYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGE-DNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLF-NKSVYVQVMSHWVNQSLNTAVNYYNR 573
            ST+  R    + + DPR   T++A++ R Q LLK    G  D+   +K+L  A     A  +  TGE IP PFR+SGF+    PIV  +L  N+ +   V   W+NQS N AVNY NR
Sbjct:   24 STFKGRLRHFLDVTDPRTLFTSQAELERSQELLKSFERGTLDSTITNKQLWEAQKIKQAIIHPDTGEKIPMPFRMSGFVPFGAPIVTGLLLPNQGIAQIVFWQWLNQSHNAAVNYCNR 141
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A1W0WGX5_HYPDU (Sidoreflexin n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WGX5_HYPDU)

HSP 1 Score: 70.1 bits (170), Expect = 8.530e-11
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 1 
Query:  223 MSTYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGE-DNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLF-NKSVYVQVMSHWVNQSLNTAVNYYNR 573
            +STY+ R L    ++DPR   T++++++  Q LL  ++ G   +G  +KEL  A   V +  +  TG+ IP PFR+SG++    PIVA +L  N ++   +   W+NQS N  VNY NR
Sbjct:   57 LSTYSGRVLHFFNVIDPRTLFTSDSELKNAQALLTAYKSGWLPSGIGNKELWEAQKIVQSMVHPDTGDTIPMPFRMSGYVPFGSPIVAGLLLPNPTLGSIIFWQWLNQSHNACVNYCNR 175
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: A0A8J9SXF3_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SXF3_PHATR)

HSP 1 Score: 69.7 bits (169), Expect = 9.710e-11
Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 1 
Query:  226 STYADRFLRVIGLMDPRHTLTTEADVRRYQRLLKEHRVGEDNGAL-DKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            +++  RF +++   DPR    TEA V+R Q +++ ++  +  G + ++ L  A   VDA+ +  TGE IP PFR+SG++  N PI  +M+ + S    +   W NQS N  VNYYNR
Sbjct:   15 TSFVGRFSKMLLACDPRLLFYTEAQVKRSQEMIQNYK--DFQGTVHNRALWEARRIVDAALHPDTGEFIPRPFRMSGYVPYNGPICVSMVASTSTPALLFWSWANQSQNALVNYYNR 129
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Match: E4XI82_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XI82_OIKDI)

HSP 1 Score: 68.6 bits (166), Expect = 2.520e-10
Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = 1 
Query:  232 YADRFLRVIGLMDPRHTLTTEADVRRYQRLL----KEHRVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLSGFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR 573
            ++ R+   + +++P   + +EAD+R  + LL     E R G   G  +KE+  A   V ++ +  TGE+IP PFR+SG++  N+PI+  +L  +         W NQ+ N  +NY NR
Sbjct:   18 FSGRYFHFLSVINPASLIKSEADIRAAEGLLLRSRNEARGGVVKGYTNKEMWQAQTLVQSAVHPDTGEIIPRPFRMSGYVPFNLPILVGLLVPQGTAATAFWQWTNQTHNALINYSNR 135
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18132.5594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JM69_9PHAE9.590e-9796.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSM6_ECTSI1.040e-5895.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Z5J8Z9_FISSO1.260e-1339.66Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1D055_CYCTE3.300e-1237.39Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A2R5GB23_9STRA6.610e-1235.90Sideroflexin-5 n=1 Tax=Hondaea fermentalgiana TaxI... [more]
A0A7S4D3Q6_9EUGL2.170e-1137.61Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7I8VLJ2_9ANNE5.290e-1139.83Sidoreflexin n=1 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A1W0WGX5_HYPDU8.530e-1136.97Sidoreflexin n=1 Tax=Hypsibius dujardini TaxID=232... [more]
A0A8J9SXF3_PHATR9.710e-1136.75Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
E4XI82_OIKDI2.520e-1032.20Uncharacterized protein n=1 Tax=Oikopleura dioica ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18132contigEcto-sp13_S_contig18132:603..3308 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score195.3
Seed ortholog evalue2.6e-47
Seed eggNOG ortholog2880.D7FSM6
Model size576
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.ion transmembrane transporter activity
EggNOG OGsKOG3767@1,KOG3767@2759
Ec32 ortholog descriptionTricarboxylate/iron carrier
Ec32 orthologEc-04_000590.1
Cds size576
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462936.3053143-CDS-Ecto-sp13_S_contig18132:602..9471681462936.3053143-CDS-Ecto-sp13_S_contig18132:602..947Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18132 603..947 +
1681462936.3155558-CDS-Ecto-sp13_S_contig18132:2251..24221681462936.3155558-CDS-Ecto-sp13_S_contig18132:2251..2422Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18132 2252..2422 +
1681462936.3240488-CDS-Ecto-sp13_S_contig18132:3248..33081681462936.3240488-CDS-Ecto-sp13_S_contig18132:3248..3308Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18132 3249..3308 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18132.5594.1prot_Ecto-sp13_S_contig18132.5594.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18132 603..3308 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18132.5594.1

>prot_Ecto-sp13_S_contig18132.5594.1 ID=prot_Ecto-sp13_S_contig18132.5594.1|Name=mRNA_Ecto-sp13_S_contig18132.5594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
LSEAGASATAAAALVGATAAFSDVGKASPPSSGGVAACTEKTSTLAETVA
GRASAAASVVAAGTKSSSDAAGKPMSTYADRFLRVIGLMDPRHTLTTEAD
VRRYQRLLKEHRVGEDNGALDKELAAAAAKVDASCNVATGEVIPAPFRLS
GFLVCNIPIVAAMLFNKSVYVQVMSHWVNQSLNTAVNYYNR*
back to top

mRNA from alignment at Ecto-sp13_S_contig18132:603..3308+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18132.5594.1 ID=mRNA_Ecto-sp13_S_contig18132.5594.1|Name=mRNA_Ecto-sp13_S_contig18132.5594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2706bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18132:603..3308+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTATCCGAAGCAGGTGCGAGCGCCACAGCCGCCGCTGCCCTTGTGGGAGC
AACCGCGGCCTTCAGCGACGTGGGAAAGGCGTCGCCGCCGTCGAGCGGCG
GCGTCGCGGCTTGCACGGAAAAGACGAGCACCCTCGCGGAGACCGTCGCG
GGCAGGGCAAGCGCCGCCGCTAGCGTCGTGGCGGCGGGGACAAAGAGCAG
CAGCGATGCCGCCGGTAAGCCGATGTCGACGTACGCCGACCGTTTCCTTC
GGGTGATCGGGCTCATGGACCCGAGGCACACGTTGACGACGGAGGCCGAC
GTGCGGCGGTACCAGAGACTGCTCAAGGAGCATCGCGTTGGGGAGGTGAG
CAGAGACAAGAGCGCAGACAAAGCTCCAATGTGCTAATTTGATCAGCATC
CTGCTGCTGTGTAGTTGAGTGATGTCAATTGGCCCGGGGCAATCTAGCTT
AGTCGGTTGGTCGATAAGAATACGTCCATCTTTATTACTGGATAAAGAGC
GAGAACGATAGAGACGCGTGTGCGCCGGGAAATGAGCTCTTACCTGTGCT
CGCAACGTACACGCCCGGTTGTTGAGGGTTTTAGAAAGAGTCCGGTGATC
TGGGCCTCGTGCTTTTCCGTCGATGGTTGTTGTTGTTGTTGCATGATTGC
TGTTGCCTGGGGCCGTTACTTTTCCCCTACCGCCTTGGATTATGTGCTCG
CGGTGCTTGGTGCTTTCACCTGTGGGTACGGTCTTACAAAGCCGATCCGA
AGACGGAGGGGACGGCCGTACCATACGGTATGGTACGGCCGTCCCCTCCA
TCTTCGGATCGGCCCACGGCTCTTTGGTAGGACCTGCCTGTGATAGCACC
AAGCACAGCGAGCACATAACTCAAGGCGGTGAGTGAAAAGTAACGGCCCC
CGACAACAATAACAGCGACACAAAAGCACCAGCAACGACGAGCACGCAAT
GGCTACGACAACAACAACCGCCGGAGCAAAGAGGGGTGGGACGATCCTAA
GATGGATAGGCAATGTAGCACGGACGAGAAAAATACGTTTTTTCGCCGCT
CTCTCGGAGAGAGAGCAACGGTGCCCGCAGTTTTCTGATTGATGCATTTT
TTCAAAAGGAAATATTCAATCTGAGACCAGATATCCACTTCTAGCGCCTG
CTGGGCGTGCTTGTCGCTGGTCCCCAAACTGCCCGGCAGGAGCAGTAGTG
CCACACACACGAGCGCGAGAGCTAGGGCAGCATTCTTGAATATGGCACAT
ACCAGAAATCCGTATGTTCACAATTGCTGGACGGAAGCATCGGAACTGCA
TGGAATCCCCCGAATGGTGGTCATGTGGTCACCTCACGTCATCAACGGTG
TATCAAAAGCAGGGGCCAATGATCTCACGGTGCCCCTAAATCGTGTCACC
AAATCTCATGCACGATGGCACATCGCGGGACCAACAGGCTCGCCAACGAT
CTCACGGTGCCCCCAAGTTACTTCGCCGAGATGTCATGCATGATGGCATA
CAAATCGCGAGACCAACAGCCGCAGCAGTGACGTCATGATGCCCCCGAAT
CCGTTCGTTCTTCTTCTTCTTTATCTCGTTGCTGTCGCTTAGTCGTTTGT
ACTTGCCGTTACATGAATTATTATTATTTTTGTTTCCTGGTTTTTGCAGG
ACAACGGCGCGTTGGACAAGGAATTGGCTGCTGCTGCCGCCAAGGTGGAC
GCGAGCTGCAACGTTGCTACCGGGGAAGTCATCCCCGCGCCGTTCCGCCT
GTCCGGCTTCTTGGTGTGCAATATCCCGATTGTTGCGGCCATGCTCTTCA
ACAAGAGCGTGTATGTCCAGGTGTGTTGTTATTGTTGTCGTCGTCAATGT
TTCGATTTCTGGACCGCCTACGCAGGATTTTAAGAGTATGTAGAAAAATA
TTAGGAAGGGGGCACGCAGACCCTTATCCCTAAACCTAACCCCAAAGCAC
GGATTGAATACTTCATCCCGTATGTTTGTTTAATCAATTTTGCTGCGTAG
ACTGACTGTTTGTAACGTGTTTTTTTGTTGCTATTCTCTTCTTGCTGGTG
TTGCTGTCGTTGAATCAGTTCTTGTTGCTGTTCTCTTCCCGTTAAGAATC
ATTCATACTTTCGGTTTGCCCGTGCCTGCCCCTTCCGCGGCGCCACCACA
ACAAGCATTCGCACGAAATGTGACCCGAGTTCACGAGCTGCTTCAAACGT
GGCAGAACACGTTTACGCTTGGTCCATCGTCTCTACGGGAGGAAGCTCGT
TTCTCACGCATGCGAAGCCCTGTTGCTCACGAAGGACGCATGTCGCACAG
GGGGGGCATCCAACCCCGGTGGAAAACGTCAAAACGTAATATCGGGAAAT
GATCTATCTGATCGGCACGTGGAGACCAAGGGAGATGGGAGAGCGTCTTC
CAACTTCAACGATTGTTTTGGGAAACTTGCACACCCACAAGATGGGAGAG
CGTCTTCCAACTTCAACGATTGTTTTGGGAAACTTGCACACCCACAAGAT
GTCTTCGGGAATTGGTGCCGTGTGCTGCCCTTTCCTGACGTTGGTGGTCT
TACCTAGCGGGTGGTGCTCTAAGCCTTGGGAGAAACGAAATATCGAAAGC
TTTGCCCTGTTCCTTTCTTTCTCCGATCCCCCTAACGGATTGACAGGTGA
TGTCCCACTGGGTAAACCAGAGCCTCAACACGGCAGTCAACTACTACAAT
CGGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18132:603..3308+

>mRNA_Ecto-sp13_S_contig18132.5594.1 ID=mRNA_Ecto-sp13_S_contig18132.5594.1|Name=mRNA_Ecto-sp13_S_contig18132.5594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18132:603..3308+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTATCCGAAGCAGGTGCGAGCGCCACAGCCGCCGCTGCCCTTGTGGGAGC
AACCGCGGCCTTCAGCGACGTGGGAAAGGCGTCGCCGCCGTCGAGCGGCG
GCGTCGCGGCTTGCACGGAAAAGACGAGCACCCTCGCGGAGACCGTCGCG
GGCAGGGCAAGCGCCGCCGCTAGCGTCGTGGCGGCGGGGACAAAGAGCAG
CAGCGATGCCGCCGGTAAGCCGATGTCGACGTACGCCGACCGTTTCCTTC
GGGTGATCGGGCTCATGGACCCGAGGCACACGTTGACGACGGAGGCCGAC
GTGCGGCGGTACCAGAGACTGCTCAAGGAGCATCGCGTTGGGGAGGACAA
CGGCGCGTTGGACAAGGAATTGGCTGCTGCTGCCGCCAAGGTGGACGCGA
GCTGCAACGTTGCTACCGGGGAAGTCATCCCCGCGCCGTTCCGCCTGTCC
GGCTTCTTGGTGTGCAATATCCCGATTGTTGCGGCCATGCTCTTCAACAA
GAGCGTGTATGTCCAGGTGATGTCCCACTGGGTAAACCAGAGCCTCAACA
CGGCAGTCAACTACTACAATCGGTGA
back to top