mRNA_Ecto-sp13_S_contig1786.5433.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1786.5433.1
Unique NamemRNA_Ecto-sp13_S_contig1786.5433.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: D7FTY7_ECTSI (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY7_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 2.950e-93
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 1 
Query:    1 MSASLQRSSALLRPVVTAHVRRLHSSVPKTSSAPGSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKEENAK 462
            MSASLQRSSALLRPVVTAHVRRLHSSVPKTSSAPGSASVLNADDGKLGTKLYHAVNMV+LAGVPAAVATSPSALTMPLDIVLGIAMPLHAH+GMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKEE AK
Sbjct:    1 MSASLQRSSALLRPVVTAHVRRLHSSVPKTSSAPGSASVLNADDGKLGTKLYHAVNMVVLAGVPAAVATSPSALTMPLDIVLGIAMPLHAHIGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKEEGAK 154
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: W7TCL8_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCL8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.830e-31
Identity = 71/152 (46.71%), Postives = 95/152 (62.50%), Query Frame = 1 
Query:    7 ASLQRSSALL----RPVVTAHVRRLHSSVPKTSSAPGSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKE 450
            +SL  S ALL    R     H R + +  PK  +     S++ AD G +GTK YH  N  +L   P A+  SPS LT PLD+ LG+A P+H H+G+NY+ISDYVP+++R  AR  +L A+ +  LGLLKLNL+G GLTET K+ WR  K +E
Sbjct:   16 SSLPSSGALLNRTSRTNAFLHGRCISTGQPKKVNVQ---SLVEADSGAVGTKFYHLSNTALLVAAPLALFLSPSPLTFPLDLFLGVAFPVHGHIGINYIISDYVPRASRPLARYVLLGATTVTVLGLLKLNLSGPGLTETYKSLWRAEKKEE 164
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: W4GD77_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GD77_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.830e-27
Identity = 59/116 (50.86%), Postives = 85/116 (73.28%), Query Frame = 1 
Query:  103 GSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKE 450
            G  +VLNAD+ K  +K+ H  +  +LA VPAAV  SPSAL +P+D +L + +P+H+H+G+N V+SDYVPK+ +  AR  +L AS++  LGL+ LN+TGAG+TET+K+ WR P  KE
Sbjct:   37 GFNAVLNADNSKHTSKVMHYTSYGLLALVPAAVVLSPSALNVPVDYLLAVLVPVHSHIGINNVVSDYVPKNFKTLARAGVLGASIVTFLGLITLNVTGAGVTETVKSLWREPPSKE 152
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: A0A835YQL9_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL9_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.900e-26
Identity = 63/134 (47.01%), Postives = 92/134 (68.66%), Query Frame = 1 
Query:   61 RRLHSSVPKTSSAPGSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKEENAK 462
            R++H S     +  G+  V+NAD GKLGT ++H +N  +LA +P  +  +P+ +  P++++L +A PLHAHV MNYVISDYVP+ A+  AR AML  + +A+LGL+KL+LTG GL  T+ A W+  KP +E AK
Sbjct:   22 RQVHGS---RKARKGAVDVVNADVGKLGTSMFHYLNYGLLAALPVLL-VAPTPVRTPVELLLAVAFPLHAHVSMNYVISDYVPRFAQQPARIAMLGVTAVASLGLIKLSLTGPGLVSTVGALWK--KPAKEEAK 149
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: A0A6G0X8T0_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8T0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.030e-25
Identity = 57/117 (48.72%), Postives = 80/117 (68.38%), Query Frame = 1 
Query:  103 GSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKEE 453
            G  +VLNAD+    TK  H  ++ +LA VP AV  SPSAL +P+D  L   +P+H H+G+N V+SDY+PK+ +G  R A+L  SV+  +GLL LN+TGAG+TE++KA W  P  K+E
Sbjct:   36 GVNAVLNADNSVYTTKAMHLTSLALLALVPTAVVLSPSALNVPVDYALAALIPIHGHIGLNGVLSDYLPKNVQGLGRVAVLGVSVVTFVGLLSLNITGAGITESVKAIWIEPPSKKE 152
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: A0A225WU41_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WU41_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.990e-25
Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 1 
Query:    1 MSASLQRSSALL--RPVVTAHVRRLH-SSVPKTSSAPGSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWR-GPKPKEE 453
            M  S+ R+ ++L  RP    H R+   +   +     G A ++ AD+ KL  KL H  ++ ++  VP A   SPS L +P+D+ +G+ +P+HAH+GMN VISDYVPK+ R   R   L A+ L  LGLL++NL G G+TE +K  WR  P  K+E
Sbjct:    2 MHRSVMRTGSVLTKRPSGVRHFRQSRPTKYTENKEVTGLAGIVEADNHKLSVKLQHLTSVALMGAVPLAFVLSPSPLVLPVDLAMGVILPVHAHIGMNNVISDYVPKNMRTLVRLGWLGATSLMFLGLLRVNLEGPGITEVVKTVWRESPNKKQE 156
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: A0A7S2WU59_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU59_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.350e-25
Identity = 57/108 (52.78%), Postives = 71/108 (65.74%), Query Frame = 1 
Query:  118 LNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPK----SARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATW 429
            L AD+G + TKLYH +NM +L   P A    PS +T PLD+ LG+ MPLH H+GMNYVI+DYVPK    +ARG AR  ML  + +   GL  LNLTG G+T T+K  W
Sbjct:   33 LAADEGAMSTKLYHNLNMGLLVVTPPAFLFGPSYVTFPLDLALGVMMPLHGHIGMNYVITDYVPKFFGKAARGPARVIMLGVTGVTMAGLTHLNLTGKGITATIKGLW 140
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: A0A0P1AEG3_PLAHL (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEG3_PLAHL)

HSP 1 Score: 108 bits (270), Expect = 1.180e-24
Identity = 65/158 (41.14%), Postives = 90/158 (56.96%), Query Frame = 1 
Query:    1 MSASLQRSSALLRPVVTAHVRRLHSSVP----KTSSAPGSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWR-GPKPKEENA 459
            M  SL RS  +L    +  VR    S P    +     G A +L AD+  L  K  H  ++ ++A VP A   SPS L  P+D+ +G+ +P+HAH+GMN VISDYVP+S R  AR   L A+ L  +GLL++NL G G+TE +K  WR  P+ K+  A
Sbjct:    2 MHRSLMRSGTVLSKRPSLAVRHFRKSSPTKYTENKELTGMAGILEADNHALSVKAMHLTSLGLMAAVPVAFVLSPSPLAFPVDMAMGVMLPVHAHIGMNNVISDYVPQSMRTLARLGWLGATSLMFVGLLRVNLEGPGITEVVKTIWRESPEKKKVKA 159
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: A0A7S3PKA9_9STRA (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PKA9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.320e-24
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = 1 
Query:  112 SVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKEE 453
            +++ AD      KL+H  N+ ++   P A+   PS L+MP+D+ L I  PLHAH+GMN + +DYVP S  G AR A+LA SVL+T+GLLKL ++  G+T TLKA W+ PK +E+
Sbjct:   38 NLVGADQTLSQAKLFHKTNLAVMVLTPLAIVAHPSPLSMPVDVALAIVFPLHAHMGMNIIFTDYVPGSPTGPARMALLAVSVLSTIGLLKLAVSEDGITGTLKAVWKEPKKEEK 151
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BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Match: D0NIT5_PHYIT (Succinate dehydrogenase [ubiquinone] cytochrome b small subunit n=11 Tax=Phytophthora TaxID=4783 RepID=D0NIT5_PHYIT)

HSP 1 Score: 108 bits (270), Expect = 1.320e-24
Identity = 63/152 (41.45%), Postives = 87/152 (57.24%), Query Frame = 1 
Query:    1 MSASLQRSSALLR----PVVTAHVRRLHSSVP----KTSSAPGSASVLNADDGKLGTKLYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISDYVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWR 432
            M  SL RS   +     P  ++ VR    S P    +     G A ++ AD+  L  KL H  ++ ++  VP A   SPS L +P+D+ LG+ +P+HAH+GMN VISDYVPK+ R  AR   L A+ L  LGLL++NL G G+TE +K  WR
Sbjct:    2 MHRSLMRSGTAMTKRTAPRPSSSVRHFRKSAPTKYTENKEVTGLAGIVEADNHALSVKLQHLTSVSLMGAVPLAFVLSPSPLVLPVDLALGLILPVHAHIGMNNVISDYVPKNVRTLARLGWLGATSLMFLGLLRVNLEGPGITEVVKTVWR 153
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1786.5433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTY7_ECTSI2.950e-9398.05Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
W7TCL8_9STRA8.830e-3146.71Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
W4GD77_9STRA3.830e-2750.86Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A835YQL9_9STRA1.900e-2647.01Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A6G0X8T0_9STRA2.030e-2548.72Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A225WU41_9STRA2.990e-2540.65Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A7S2WU59_9STRA7.350e-2552.78Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A0P1AEG3_PLAHL1.180e-2441.14Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
A0A7S3PKA9_9STRA1.320e-2447.37Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]
D0NIT5_PHYIT1.320e-2441.45Succinate dehydrogenase [ubiquinone] cytochrome b ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1786contigEcto-sp13_S_contig1786:10812..14442 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score290.4
Seed ortholog evalue4.9e-76
Seed eggNOG ortholog2880.D7FTY7
Model size1198
KEGG rclassRC00045
KEGG koko:K00237
KEGG ReactionR02164
KEGG Pathwayko00020,ko00190,ko01100,ko01110,ko01120,ko01130,ko01200,ko04714,ko04932,ko05010,ko05012,ko05016,map00020,map00190,map01100,map01110,map01120,map01130,map01200,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00009,M00011,M00148
Hectar predicted targeting categorymitochondrion
Exons5
EggNOG free text desc.CybS, succinate dehydrogenase cytochrome B small subunit
EggNOG OGs2E21K@1,2S9AK@2759
Ec32 ortholog descriptionSDH4, succinate dehydrogenase subunit 4
Ec32 orthologEc-07_002870.1
Cds size465
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1786.5433.1prot_Ecto-sp13_S_contig1786.5433.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1786 10812..13709 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462925.1287398-CDS-Ecto-sp13_S_contig1786:10811..108901681462925.1287398-CDS-Ecto-sp13_S_contig1786:10811..10890Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1786 10812..10890 +
1681462925.142061-CDS-Ecto-sp13_S_contig1786:11800..118451681462925.142061-CDS-Ecto-sp13_S_contig1786:11800..11845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1786 11801..11845 +
1681462925.150134-CDS-Ecto-sp13_S_contig1786:12316..124811681462925.150134-CDS-Ecto-sp13_S_contig1786:12316..12481Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1786 12317..12481 +
1681462925.158446-CDS-Ecto-sp13_S_contig1786:13215..133071681462925.158446-CDS-Ecto-sp13_S_contig1786:13215..13307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1786 13216..13307 +
1681462925.169048-CDS-Ecto-sp13_S_contig1786:13625..137091681462925.169048-CDS-Ecto-sp13_S_contig1786:13625..13709Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1786 13626..13709 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462925.1772966-UTR-Ecto-sp13_S_contig1786:13709..144421681462925.1772966-UTR-Ecto-sp13_S_contig1786:13709..14442Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1786 13710..14442 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1786.5433.1

>prot_Ecto-sp13_S_contig1786.5433.1 ID=prot_Ecto-sp13_S_contig1786.5433.1|Name=mRNA_Ecto-sp13_S_contig1786.5433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
MSASLQRSSALLRPVVTAHVRRLHSSVPKTSSAPGSASVLNADDGKLGTK
LYHAVNMVILAGVPAAVATSPSALTMPLDIVLGIAMPLHAHVGMNYVISD
YVPKSARGGARGAMLAASVLATLGLLKLNLTGAGLTETLKATWRGPKPKE
ENAK*
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mRNA from alignment at Ecto-sp13_S_contig1786:10812..14442+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1786.5433.1 ID=mRNA_Ecto-sp13_S_contig1786.5433.1|Name=mRNA_Ecto-sp13_S_contig1786.5433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3631bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1786:10812..14442+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCAGCCTCGTTGCAACGGTCCTCCGCCCTGCTGCGACCTGTGGTCAC
TGCCCACGTCAGGCGACTCCATTCGTCAGGTAGGCAACAGCTTGATGTGG
TTGGTACATCGATCGCAGCAGCAGTTAGGATAGTCCGCTGCCAAGAAGCA
CCGGTGAAGTTCGCCATCACATTTTGGGACATGCCGTGACGCCACCTGGC
ACCTTGAGCCCCCAAGAGCTTGCATATCCCTTTCTTGCAGGGTTGCAACG
GCAAGGGTGGTAGTGGTGACGCGCTTCTCGTGAACACTGCCTTCTAGAGT
TGTTGAACGTCCGACATCGGGCAAGAAGTGCAACCACCCGCAGCAGCCCG
TGGAACCGTTGCTTGCAGCGTGCCATGTTACAATATGCACCTTGGCCGCC
GTTGCTGTATACCGCAACATGCAAGTCAGCAGCTAGTCTACTAATCTAGC
AGGCTCGATGTAGATGAAAGCTGCCTTCTGATGACTGTTGGAGGCATTTC
CACACAAATGCGTATACACCAAACCATGTGGTTGTTGTCAGCACGGTGGA
CACGACACCTTGGATGTGTACCGCTACCGCTTGCGATATCGCTTCGGTAT
TTGGACATCCGGATACGTCGCATCCGGTGATGTCGCATGATATCGTCGAA
ACGGTATTCATTGTACTGGGGAATGAATCGAGACATCGGGAGATATCGCG
AACGATGGCCTTCGGGTGTGCTTTGCTGTTTTTCGCACCAAAGCGGAAAG
CACGGCCATGCTTCGATAGAAGAACAGGATAGACTCGCCCCGTGATGCGT
ATGTGAGGGCCAAAGGCGTAACCCCTCTCTCGAAGACAGACATCCGCTCG
TTTTTGGTTGCGAAAGCTGCGCTTTCGTAGCGCACGCCAGGTGCAAAGCA
TTAAAGAACGCGTTTTGACCACTGATGCTCTTGTTCTACACTTCTTGTTT
GCACCGTTCGTCGCCCACGCTTCACGTGTCTCCCGGCAGTGCCAAAGACA
TCCTCTGCCCCTGGGAGTGCAAGTGTCCTCAACGGTAAGCATGGCGCAGA
GTGCTCTTTGACAAATAAATATTTCCTTGCCCGTCGCGAGACCGTGCTTC
GCTTAGCTTTTGAAGGCGATTGAATTCGAACTCTCGGTTATTAGACGTGT
GCGGCCACATACTGGATGCGTGTCCGTCTGCAACCTTTCAGCGATTTGCT
CCATGATCACATGTGGATCTCCCAGAAACGCAGCTGCTTTGTTGGCGTAT
GGGCGTGGCTGGAGCGTTGTGATTGCGCGTCATCACTTTTTTCGACGCGT
CCAGCAGTCTCCGCTTATATCTGGTTCTACGGGTCAAGATACAGTACCTC
GGCAGTAAGGATAACGACATGACCGGTTCTGTCGTTGTAGGTGCAACGTA
TCATTTCCTCGCCTTTACCTCTCCCTCCTTAATCGCTCGTTCCAAATCTC
ATTTTTTGCGCGGCCTGACCTGACCTGATGCGAATGTTGCTTTTGGGCGC
TGCAGCCGATGATGGGAAGCTGGGCACGAAGCTGTACCATGCCGTGAACA
TGGTGATTCTGGCCGGAGTGCCTGCGGCTGTGGCCACGAGCCCATCCGCC
CTTACCATGCCTCTAGACATCGTGCTCGGGATCGCCATGCCCCTGCACGC
ACATGTCGGCATGAACTACGGTGAGCTGCCTTCTCTTTTCAAGAAGAGTT
TTGGGGGGGGGGATTAAACACGGTGAACTGCCCTCTCTCTTTCAAGAAGG
CGTGGGGCGGGGAGTGGTTGCCTAGGGAAAGCTTCCCTCTCCTTTAAGAA
GGCTTGGTGTGTTTGAGTGGTAGTATGATTTTACCCATGTTGGCCTTGTT
CTCTCCGATATCTCTGGCGCCTCTGACTGCAGCACCGCACGAGATCGGCG
TGGCCCTGACGATAGTAGATACCGTGGCGTTACACGAGGCTCGAGCACGT
CAGTTGAGCTCCCAGCGCTTCGACTCTGATCAACAAACACAACGGTGCCT
GGAACGATGAGGCTGTTGCGTCTGCTGGCGTGTTACGGACATGGTCCTGT
CTACGTAACGCCGGTACACGCTGACGTCACACGTCAGTTCCTGCAGGAGC
GTTGTGTGTACGCTTAGGCGCGTACACTAAATCGTAAGTTTGCCTGCGTT
TCGTGTTGAACGAGATTCAGCGAAATTCTGCGATAAACCCAGGCTGCTCT
TCGTTTTTGAGGAGCGGAGAAATGAAAGCTCTCGCGCGTCTCCCCTCGGC
ACATGCTCTTTATTTTCTTTTGGTGCAATCCGTAAACACGTTCCGGCATG
TCGGTTTTGATTCCGGTTGGGCCTTAATTTTTTTCCTGCTCGTACGGGTG
ACGTTGTCCGCCGTGCTTTCGTGGCTGTCGCCCCATTTCTTTCCAATATT
TCAGTTATCAGTGACTACGTACCGAAGTCAGCTCGGGGGGGCGCGAGGGG
TGCCATGCTTGCGGCATCGGTACTAGCTACCCTTGGCCTTTTGAAGGTAA
GGCCCGGGGTCTTTCGTCGTTCATGGTAACAGGTTTGTCTTTTTTCAGGG
CCTACTAGTTAGCGGTGCTTGTCGCGGTTGAAGACACGGTGATGACATAA
CGTAATATCTTCGGCGATGAACAGTACATTGCTGTGGACATGTATGCGTT
TGGTGTAGGCCTTACGTTGAAGCTTTGTACCCCCCTGCTGAAGCACTGGT
GTGTTTTGAAGCGCTTTTCGAAATCGCGTGCGGCGGAGGGGGTAAAATAT
GAAAATATCATCGGGAAACATCAGCGGGTATCTTCCTGTCCCGCCACGTC
CCCGTCTGTTGCAGCTCAACCTTACTGGTGCTGGCCTCACGGAGACACTC
AAGGCCACTTGGAGGGGGCCCAAGCCGAAAGAGGAGAACGCGAAATAGAA
ACACCCACACAAAAGAAGACACAACAGGGGCTCCGTTCAGCCACCAAAGG
GCTCACTTGAAAGCTGTCAATGCCGTAGGCCTGTCATCACATGGACGTTG
CCGTGCGCGATAGCCTTTGCTGCAGGTCGGCAATACCAAACCGGGGGCTG
TTGTGCAAAGCTGTGGGAAAGTGTACATGTGACGCAACAGCACTGTAAAT
ATAGGCGTCGGTATGCGTAGCTTCTGGTAGCTCGGCCATCCTGAGCCTTT
CATGTTGCTTGACAGGGCAGGTTGTCCGCTGTAAGCCATCTCCATTCCTA
CTTCTGCCGGTGCAGAAGGGAGGTACGTTTTTAGTTCGTGCTCGCTGTCG
CTTTCAGGTTTTCCGATTTGCGTTTGTAGGCGCAACTAGCTGCTGATTGT
CGAACTGGGTGTCTCAATCAAGTCTTTTGGTGTGAGCCGCGTGTGTTCCA
TTTCGGCTCAAGGGTTGTTGAAATTGTGCCCTCGAACAGCTCAGGGCGCC
ATCGGCGCAGAGAGCACCTTGCTGTGGGTACACTCTCATTGCGTACGAGG
TAGAGTAAATAGTTTCCGAAGCTTCGGTGTCACGCGTGCAACGCGGCGAA
GCCGTTTGTCAAAAGGGGGCCAGGTCGGCTCAGTCTCTAATCCGGAAGGA
GATCATGGGCTGAGAAGGGAAGTTGACTCAAGCCGCGTCTCCCTACCGTC
AGGGGAGAAAAATCTGGGAAATGCACCGAAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1786:10812..14442+

>mRNA_Ecto-sp13_S_contig1786.5433.1 ID=mRNA_Ecto-sp13_S_contig1786.5433.1|Name=mRNA_Ecto-sp13_S_contig1786.5433.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=465bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1786:10812..14442+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCAGCCTCGTTGCAACGGTCCTCCGCCCTGCTGCGACCTGTGGTCAC
TGCCCACGTCAGGCGACTCCATTCGTCAGTGCCAAAGACATCCTCTGCCC
CTGGGAGTGCAAGTGTCCTCAACGCCGATGATGGGAAGCTGGGCACGAAG
CTGTACCATGCCGTGAACATGGTGATTCTGGCCGGAGTGCCTGCGGCTGT
GGCCACGAGCCCATCCGCCCTTACCATGCCTCTAGACATCGTGCTCGGGA
TCGCCATGCCCCTGCACGCACATGTCGGCATGAACTACGTTATCAGTGAC
TACGTACCGAAGTCAGCTCGGGGGGGCGCGAGGGGTGCCATGCTTGCGGC
ATCGGTACTAGCTACCCTTGGCCTTTTGAAGCTCAACCTTACTGGTGCTG
GCCTCACGGAGACACTCAAGGCCACTTGGAGGGGGCCCAAGCCGAAAGAG
GAGAACGCGAAATAG
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