mRNA_Ecto-sp13_S_contig1773.5371.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A6H5KUA3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUA3_9PHAE) HSP 1 Score: 610 bits (1573), Expect = 6.640e-212 Identity = 334/353 (94.62%), Postives = 337/353 (95.47%), Query Frame = 3
Query: 339 DAGTLVHYYESEADAPGMPEVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEE-RGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLIVAACS 1394
+AGTLVHYYESEADAPGMPEVLSLPESATGRKARIS ETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAG+GDKGHTEAN XXXXXXXGEPSCPDE+SAVGDPTLTAHAASALTEDLKWR TMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVK GGKK ARENPEGKGAEGPQEE RGGEAAMEKLLASLPSDLR VTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLIVAACS
Sbjct: 59 EAGTLVHYYESEADAPGMPEVLSLPESATGRKARISIETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGSGDKGHTEANS-XXXXXXXXGEPSCPDERSAVGDPTLTAHAASALTEDLKWRETMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKTGGKKPARENPEGKGAEGPQEEXXXXXXXXRGGEAAMEKLLASLPSDLRFVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLIVAACS 410
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A836CQU9_9STRA (HAD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQU9_9STRA) HSP 1 Score: 244 bits (624), Expect = 2.960e-71 Identity = 155/351 (44.16%), Postives = 195/351 (55.56%), Query Frame = 3
Query: 345 GTLVHYYESEADAPGMPEVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQ-DAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHF--DIP-LANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLIVA 1385
GTL+HYYE P VL+LP S TGR+A IS TL+L +R G +L LVSG RYSTFV+RLP+LP ADAY IENGGR+FYP +AA PS P + S TA L EDLKWR +ES G AS+ D + E R GP+WD+ RA AEG+ VDT TY TM+RI +G GEA + + +ASLP + TNFGLVD+ P SGK + A +LA HF ++P L CA+MGDDDNDI + ++ G+GAF+T FSS S+EAAA+ P QF VA + GV A+EE L I++
Sbjct: 6 GTLLHYYEKGEPVPDADTVLALPPSKTGRRALISKRTLELTTALRQRGVKLTLVSGVRYSTFVDRLPYLPHADAYCIENGGRIFYP-------TAA------------------------PSPPPDGSTYH----TAPPEHCLQEDLKWREGLESVCGKASENDPLDAERRAGPVWDLCRALRAEGWTVDTATYNTMLRINAGEG----------------------------DGEARLLRRMASLPPSFLIATNFGLVDVMPRASGKLHVARYLAAAHFKFEVPDLGGCAAMGDDDNDIEMLSAAGRGAFVTGFSSRSIEAAARAAPRQFRVAAASGVAAAEECLEAILS 293
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A8J4GFN1_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4GFN1_9CHLO) HSP 1 Score: 184 bits (466), Expect = 4.750e-49 Identity = 129/362 (35.64%), Postives = 179/362 (49.45%), Query Frame = 3
Query: 318 RCLFSDIDAGTLVHYYES-EADAPGMPEVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKL---LASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEG--VQASEEMLRLIVA 1385
R +FSDID GT++H ++ + DA VL P SA+GR+ IS TL L AQ+R+ GA V++SG R ST + RLP+LP ADAYV ENGGR+ +P D+ + CP +TED WR + + G QDA+ P+DR GPLWD+YR +A+G+ +D N Y T R+ + G+ ME+L +A+ P L N G D P SGK AA L HF +C+ + DDDND+ LA +G+ AF+ + +S+S+ AA+ PE F VAKS+G V A+EEMLR ++A
Sbjct: 6 RVVFSDID-GTIMHEPKTIDRDAA----VLLTPPSASGRQGVISAMTLHLVAQLRSRGAVFVVISGARLSTLLMRLPYLPAADAYVCENGGRILFPGSDLPTA-----------------------------CP------------------VTEDKDWRASHDGVAGSVEQDAVQPKDRAGPLWDMYRKLLADGWTLDANGYTTSFRVHAR-------------------------------GDKTMEQLRELVANKPEGLSCSFNLGAADFYPSTSGKVMAARHLMA-HFGAAAKDCSFLCDDDNDLELAAEVGR-AFLPSLTSDSIRQAAEARPEHFVVAKSQGQGVVATEEMLRAVMA 282
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A2K3DD66_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DD66_CHLRE) HSP 1 Score: 183 bits (464), Expect = 9.590e-49 Identity = 132/359 (36.77%), Postives = 180/359 (50.14%), Query Frame = 3
Query: 318 RCLFSDIDAGTLVHY-YESEADAPGMPEVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKS--EGVQASEEMLRLIVA 1385
R +FSDID GT++H E + DA VL P SA+GR+ IS ETL L A++RA GA V++SG R ST + RLP+LP ADAYV ENGGR+ YP D+ + CP +TED +WR + + A G QDA P++R+GPLWD+YR +EG+ +D N Y T R+ + GK EE+R ++A+ P+ L N G D P SGK AA L F P C+ + DDDND+ LA +G+ AF+ + +S+SV AA+ PE F VAK+ +GV A+EEML ++A
Sbjct: 7 RIVFSDID-GTIMHEPKEFDRDAA----VLLTPPSASGRQGVISAETLHLVAKLRARGALFVVISGARLSTLLMRLPYLPLADAYVCENGGRILYPGSDLPTA-----------------------------CP------------------VTEDKEWRASHDHAAGSIEQDATPPQERKGPLWDLYRKLHSEGWSLDANGYTTSFRVHAGRNGKSL----------------EELR-----------AVVAAAPAGLASSFNLGAADFYPDTSGKVMAARHLMAR-FGAPAPACSFLCDDDNDLQLAAEVGR-AFLPSITSDSVRVAAEARPEHFVVAKTAGQGVVATEEMLHAVMA 284
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A7S1T8Q7_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T8Q7_9CHLO) HSP 1 Score: 168 bits (425), Expect = 5.700e-43 Identity = 125/368 (33.97%), Postives = 173/368 (47.01%), Query Frame = 3
Query: 324 LFSDIDAGTLVHYYE----------SEADAPGMP---------EVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEML 1370
LFSD+D G++VHY S AD G VL LP S TG + IS TL+L A+VR G R+V++SG R ST + RLPFLP ADA V ENGGR+F +GDP A L ED+ WR GP SQ+ ++PE+R GPLW+VYRA A+ ++ D ++Y T R+KV G P AE + L LP L N G+ D+ P SGK AAA++ + + + +CA + DDDND+ALA +GK A++ S+E+++ A +G+P+ F VA + G +E+ L
Sbjct: 7 LFSDVD-GSIVHYPATTDKLGRLEGSSADGRGHTFVTNEGDSHTVLKLPPSKTGMQGVISLRTLELFAEVRRMGFRVVVISGARTSTVLQRLPFLPFADAVVTENGGRIF---------------------------------------------MGDPHQLTTAP--LVEDMGWREVHREGAGPGSQEGVSPEERVGPLWEVYRAFKADAWKPDADSYTTSFRVKVTPG-------RPAHTAAE------------------LASRLEELPETLTHAFNLGMADVYPKSSGKEKAAAYIMSK-WGVDNEDCALLCDDDNDLALARMLGK-AYLPGVSAETMKKATEGDPDHFFVAPNHGTVGTEQAL 299
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A7S4UFW4_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UFW4_9DINO) HSP 1 Score: 167 bits (422), Expect = 3.470e-42 Identity = 121/373 (32.44%), Postives = 176/373 (47.18%), Query Frame = 3
Query: 303 GKGSIRCLFSDIDAGTLVHYYES--------------EADAPGMPEVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLI 1379
G + +FSD+D GTLVH E+ G+ V LP S+TG + IS TLKL A++R G VL+SG R +T RLPFLP ADAYV+ENGGR+F+P + +++AA + ED +WR ++ +A GPA+Q++ P R G LWD+YR+ +G+ D +Y T RI + K K EA ++ + +LP L N G+ DI P SGK AA +L R+ F + SMGDDDND+ALA ++ + +I F+++SV AA + +P FTVA++ G + ++L I
Sbjct: 12 GMAGRQVVFSDVD-GTLVHLARDLESLGSVTEDGLHFESAVGGVLAVRPLPPSSTGLQGYISERTLKLVAELRRLGHVFVLISGARSTTIFERLPFLPAADAYVMENGGRIFFPVSEGHALTAAP---------------------------------------------IIEDTEWR-SVHAAAGPAAQESAPPSQRSGELWDLYRSLEQDGWACDARSYSTNFRISLSKSATKT--------------------------EADLQAVTQNLPPTLASSFNLGVADIYPATSGKDLAAQYLMRK-FGLDPQRSVSMGDDDNDLALAAAV-RHTYIPGFTADSVRAAVEADPAAFTVAETGGFVGTNDLLSRI 309
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: E1ZGI8_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGI8_CHLVA) HSP 1 Score: 157 bits (398), Expect = 2.050e-39 Identity = 121/377 (32.10%), Postives = 164/377 (43.50%), Query Frame = 3
Query: 315 IRCLFSDIDAGTLVHY-------YESEADAPGMPEVLSL-----------PESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAV--AEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLIVA 1385
++ LF+D+D GT VHY SE + G+ SL P S +G + IS ETL+L A +R G ++V+V+G R T + RLPF+P ADA+V E GGR+FYP + SAA L ED+ WR GP QD + PE R G LW Y A A D +Y T R+K G AA+ L LP L N G D+ P SGK NAA +L +H + CA + DDDND+ LA+ + K A++ +++SV A P+QF VA S+GV A+EE+LRL++A
Sbjct: 1 MKVLFTDLD-GTCVHYDWPEFGQVASEPNERGLYPCTSLDGSQQALLMRLPPSTSGAQGVISLETLRLYATLRQLGVKIVVVTGARLVTLLARLPFIPAADAFVCEGGGRIFYPTGPLDYPSAAP---------------------------------------------LVEDMAWRQQQAGVAGPPGQDVVPPEQRIGALWQFYAALKVNAPALHADACSYTTAFRVK--------------------------------GPAAAVAAALQELPPGLATALNLGAADVFPDTSGKENAARYLM-QHMRVMPQECAFLCDDDNDLGLAHLVAK-AYLPGITADSVAQAVAQTPQQFHVAVSKGVFATEEILRLLIA 297
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A2V0NTM6_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NTM6_9CHLO) HSP 1 Score: 158 bits (400), Expect = 2.150e-39 Identity = 122/356 (34.27%), Postives = 162/356 (45.51%), Query Frame = 3
Query: 324 LFSDIDAGTLVHYYESE--ADAPGMPEVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLIVA 1385
LF+DID G+LVHY +++ A+ +VL LP S TGR IS TL+ A++R GAR+ +VSG R +T + RLPFLP ADAYV ENGGR+FYP D + ++AA L ED +WR + GP Q+A+ P +R+G +WD YRA A G+ +D + Y T R+ G RG E +A+ P L N G+ D P SGK AAA L A A + DDDND+ LA +G+ AFI + SV A + +P F VA A+EEML A
Sbjct: 16 LFADID-GSLVHYPDAQSLAELERTADVLLLPPSTTGRVGVISRGTLERCARLRDGGARIAIVSGARTTTLLARLPFLPAADAYVSENGGRIFYP--DDSGLTAAP---------------------------------------------LREDFEWRALLAPVAGPLRQEALPPAERQGIVWDYYRALSAAGWRLDASGYSTAFRLLPTPG---------------------------RGREETA-AAIAARPPGLAASFNLGVADFYPAASGKEGAAAHLLARWGGAARA-AAHLCDDDNDLPLAALVGR-AFIPGITEASVSRAIEVDPSHFEVASGRWTDATEEMLDAAAA 293
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A812LU02_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812LU02_9DINO) HSP 1 Score: 163 bits (413), Expect = 5.080e-38 Identity = 124/357 (34.73%), Postives = 165/357 (46.22%), Query Frame = 3
Query: 339 DAGTLVHYYESEADA-----PGMP---EVLSLPESATGRKARISTETLKLAAQVRASGARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTMESATGPASQDAIAPEDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIPLANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQASEEMLRLIVA 1385
DAG +V + +DA P M EV LP S+TG A IS TL+L AQ+R SG VL+SG R ST + RLPFLP ADAYV ENGGR+F P ++++AA + EDL+WRG +A P +++ P R G LWD++R EG+ D N Y T R+ VKK +GK EA + ++ +LP+ L N G D P SGK AA +L + + SMGDDDND+ALA +G +I F++ESV A + P+ FTVAK + E+L LI A
Sbjct: 391 DAGGVVTLTAAASDASVGFVPAMSQEIEVRPLPPSSTGTLAFISERTLQLVAQIRQSGHLFVLISGARSSTVLERLPFLPAADAYVTENGGRIFVPAPSHSALTAAP---------------------------------------------IVEDLQWRGIHVAA--PVVLESVPPSKRPGTLWDLFRKLEREGWTCDANKYSTDFRVSVKKS---------QGK-----------------TEADLRLVIDALPTSLACSFNLGSADFYPATSGKDKAAKYLMKALGQFDKDSTVSMGDDDNDLALAKVVGH-TYIPGFTAESVRTAVQEEPQAFTVAKHGAFLGTHEVLELIGA 673
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Match: A0A7S2NZ23_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZ23_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.140e-33 Identity = 127/413 (30.75%), Postives = 181/413 (43.83%), Query Frame = 3
Query: 279 INTAGSSAGKGSIRCLFSDIDAGTLVHYYESEAD----------------------APGMPEVLSLPESATGRKARISTETLKLAAQVRASG-ARLVLVSGTRYSTFVNRLPFLPRADAYVIENGGRVFYPKKDVASVSAAAGNGDKGHTEANGGEXXXXXXXGEPSCPDEKSAVGDPTLTAHAASALTEDLKWRGTME--SATG------------PASQDAIAP---EDREGPLWDVYRAAVAEGFEVDTNTYYTMIRIKVKKGGKKRARENPEGKGAEGPQEEEEVREEERGGEAAMEKLLASLPSDLRVVTNFGLVDICPLRSGKHNAAAFLAREHFDIP--LANCASMGDDDNDIALANSMGKGAFITTFSSESVEAAAKGNPEQFTVAKSEGVQ---ASEEMLRLIV 1382
I+T K I+ +FSD+D GTLVHY++ + D ++ LP S+TG + IS ET L + +R + + VLVSG R +T + R+PFLPRADAY E+GGR+FYP VAS S++ GNGD G+ T A A L ED+ WR M+ A G D I+ E+R+G LWD R + G+ +D Y T RIK G + ++L LPS+L N G+ D+ P SGK +L++ FD C + DDDNDI +A + G A++ + +SES+ + NP+ FTVA +GV A++ LR I+
Sbjct: 3 ISTTPRMISKNIIKVIFSDVD-GTLVHYHKHDNDNNQHQGREESCLSNNETAKAVNGDDSSSIIHLPPSSTGMQGIISRETHNLVSTLRETKQVKFVLVSGMRSTTLIQRIPFLPRADAYCSESGGRIFYP---VASGSSSRGNGD-----------------------------GETTAEA-AVITLQEDMDWRQIMQRNDAAGVDGYGGNMDGVVTRRDDVISTTPIEERKGLLWDFARFLIERGWNLDYKGYATSFRIKFT-----------------------------AGFAGSPDELREILPSELSCSVNLGMSDVYPKSSGKAKCCEYLSKR-FDAKSLFEECVCICDDDNDIEMALACGH-AYLPSVTSESMVLTVQTNPDHFTVACHDGVSGTDATDAALRAIL 350 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1773.5371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1773.5371.1 >prot_Ecto-sp13_S_contig1773.5371.1 ID=prot_Ecto-sp13_S_contig1773.5371.1|Name=mRNA_Ecto-sp13_S_contig1773.5371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=416bp MRFDSVVSKIDNVCSLLCSFSPDSLKSAHRSGMSFCQPVAIVKINTAGSSback to top mRNA from alignment at Ecto-sp13_S_contig1773:6137..10104- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1773.5371.1 ID=mRNA_Ecto-sp13_S_contig1773.5371.1|Name=mRNA_Ecto-sp13_S_contig1773.5371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3968bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1773:6137..10104- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1773:6137..10104- >mRNA_Ecto-sp13_S_contig1773.5371.1 ID=mRNA_Ecto-sp13_S_contig1773.5371.1|Name=mRNA_Ecto-sp13_S_contig1773.5371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1248bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1773:6137..10104- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |