mRNA_Ecto-sp13_S_contig17573.5296.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A835ZLB8_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLB8_9STRA) HSP 1 Score: 134 bits (336), Expect = 9.310e-35 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 1
Query: 1 MIWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
MIWA+H G+++L R+VEAFII VTI+VVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK
Sbjct: 363 MIWARHGGQDVLQRIVEAFIICVTIIVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 437
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A835ZDK6_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK6_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.090e-33 Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 1
Query: 1 MIWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
MIWA+H G++IL V+AFII VTI+VVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK
Sbjct: 383 MIWARHGGQDILQGFVDAFIIAVTIIVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 457
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A6H5JXE6_9PHAE (Calcium-transporting ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXE6_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.510e-32 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1
Query: 1 MIWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
MIWAKH+G+E+L+RVVEAFIIGVTIVV GLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK
Sbjct: 333 MIWAKHDGDEVLERVVEAFIIGVTIVV-----GLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 402
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A812UDP3_SYMMI (ACA6 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UDP3_SYMMI) HSP 1 Score: 124 bits (311), Expect = 2.980e-32 Identity = 60/74 (81.08%), Postives = 69/74 (93.24%), Query Frame = 1
Query: 4 IWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
IW +H+G+++LD VEAFII VTI+VVAIPEGLPLAVTISLAYST+KMY+DQN IRVLAACETMGNATN+CSDK
Sbjct: 146 IWLRHHGKDVLDGFVEAFIIAVTIIVVAIPEGLPLAVTISLAYSTKKMYEDQNFIRVLAACETMGNATNLCSDK 219
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A482S1M4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1M4_9ARCH) HSP 1 Score: 116 bits (290), Expect = 1.390e-31 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 4 IWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
IWA+H+G +L V+AFII VTIVVVAIPEGLPLAVTI+LAYST+KMY+DQ IRVLAACETMGNATNICSDK
Sbjct: 20 IWARHHGRGVLMGFVDAFIIAVTIVVVAIPEGLPLAVTIALAYSTKKMYQDQCFIRVLAACETMGNATNICSDK 93
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A482SEH8_9ARCH (HAD family hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEH8_9ARCH) HSP 1 Score: 118 bits (296), Expect = 2.320e-29 Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 1
Query: 4 IWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
IW +HNGE+I+ V+AFII VTIVVV+IPEGLPLAVT++LAYST+KMY+DQ IRVLAACETMGNATNICSDK
Sbjct: 15 IWLRHNGEDIITNFVKAFIIAVTIVVVSIPEGLPLAVTLALAYSTKKMYQDQCFIRVLAACETMGNATNICSDK 88
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: W7TSK5_9STRA (Calcium-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK5_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.510e-28 Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 1
Query: 10 AKH-NGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
A+H +G++I ++ AFII VTI+VVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK
Sbjct: 333 ARHPDGQKITSELINAFIIAVTIIVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 405
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A7S3HT93_9STRA (Calcium-transporting ATPase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HT93_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.320e-27 Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 4 IWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
IWA+ G++ L+ + AFI+ +TIVVVAIPEGLPLAVTISLAYST+KMY+DQ IRVLAACETMGNATNICSDK
Sbjct: 308 IWARDGGKDPLNGFINAFIVCITIVVVAIPEGLPLAVTISLAYSTKKMYQDQCFIRVLAACETMGNATNICSDK 381
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A7S3Y3S6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3S6_HETAK) HSP 1 Score: 110 bits (276), Expect = 1.090e-26 Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 1
Query: 1 MIWAKHN---GEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
MIW +H+ G +I V+ AFI+ VTIVVVAIPEGLPLAVTI+LAYS+RKMY+DQNLIR LAACETMGNAT ICSDK
Sbjct: 97 MIWVEHDSPTGGQISKGVIHAFIMAVTIVVVAIPEGLPLAVTIALAYSSRKMYEDQNLIRTLAACETMGNATTICSDK 174
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Match: A0A7S2VWE4_9STRA (Calcium-transporting ATPase n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWE4_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.180e-26 Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 1 MIWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYKDQNLIRVLAACETMGNATNICSDK 225
MIW +H+G+++L V+EAFII VTI+VVAIPEGLPLAV ISL+YS+R+M D NLIR L ACETMGNATNIC+DK
Sbjct: 340 MIWLRHDGDDVLHYVIEAFIIAVTIIVVAIPEGLPLAVAISLSYSSRQMLMDGNLIRKLEACETMGNATNICTDK 414 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17573.5296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17573.5296.1 >prot_Ecto-sp13_S_contig17573.5296.1 ID=prot_Ecto-sp13_S_contig17573.5296.1|Name=mRNA_Ecto-sp13_S_contig17573.5296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp MIWAKHNGEEILDRVVEAFIIGVTIVVVAIPEGLPLAVTISLAYSTRKMYback to top mRNA from alignment at Ecto-sp13_S_contig17573:689..1632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17573.5296.1 ID=mRNA_Ecto-sp13_S_contig17573.5296.1|Name=mRNA_Ecto-sp13_S_contig17573.5296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=944bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17573:689..1632- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17573:689..1632- >mRNA_Ecto-sp13_S_contig17573.5296.1 ID=mRNA_Ecto-sp13_S_contig17573.5296.1|Name=mRNA_Ecto-sp13_S_contig17573.5296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17573:689..1632- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |