mRNA_Ecto-sp13_S_contig1757.5293.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: D7FP47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP47_ECTSI) HSP 1 Score: 492 bits (1266), Expect = 4.490e-169 Identity = 316/353 (89.52%), Postives = 325/353 (92.07%), Query Frame = 1
Query: 1 MVKRRRSSGPPAAAYPEAAGNSSTSFSQSPDQPPATAVEEATDAEGRQRCEGVKEEEEEGHDTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ADEEGEDAXXXXXXXXXXXXXXXXXTMSDTVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVHV 1047
MVKRRRS+GPPAAA PEAA NSSTSFSQS D+PPA AV EA DAE RQ C+ KEE XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX ADEEGE XXXXXXXXXXXXXXXXXTMSDTVYVEGIPWTCDE DVR+FFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQ+TVESNNHA+QAPQEPATEKARRANRKAEQP GCRTVFVKNLPYDV+EDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQ+LS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVHV
Sbjct: 1 MVKRRRSNGPPAAADPEAAENSSTSFSQSADKPPA-AVGEAADAEDRQGCKDAKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXEGADEEGE-XXXXXXXXXXXXXXXXXXTMSDTVYVEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQITVESNNHALQAPQEPATEKARRANRKAEQPTGCRTVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQNLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVHV 351
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A6H5KZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ63_9PHAE) HSP 1 Score: 481 bits (1237), Expect = 7.240e-165 Identity = 298/351 (84.90%), Postives = 307/351 (87.46%), Query Frame = 1
Query: 1 MVKRRRSSGPPAAAYPEAAGNSSTSFSQSPDQPPATAVEEATDAEGRQRCEGVKEEEEEGHDTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEEGED--AXXXXXXXXXXXXXXXXXTMSDTVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVHV 1047
MVKRRRSSG PA+A P AA NSSTS SQSPDQPPATAVEEAT+A+ RQ CE VKE EEEGHDTPA XXXXXXXXXXXXXXXXXXXX AXXXXXXXXXXXXXXXXXT++DTVYVEGIPWTCDE DVR+FFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGA+AAFGRDGQYLNGRYLTVQ APQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVH+
Sbjct: 1 MVKRRRSSGSPASADPGAAENSSTSCSQSPDQPPATAVEEATNAKHRQGCEDVKEVEEEGHDTPAGAGQEGGEAGEKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXTIADTVYVEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGAQAAFGRDGQYLNGRYLTVQ------------APQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVHL 339
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A836CEI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI7_9STRA) HSP 1 Score: 221 bits (564), Expect = 2.570e-62 Identity = 109/206 (52.91%), Postives = 141/206 (68.45%), Query Frame = 1
Query: 379 DTVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTS 996
DTVYVEGIP++ E DV +FF CG++ VRMPR+QDSGRPRGYAHV FA + A AF +DG+YL GRYL VQQ A+QA + A A +P GCRTVFVKNLPYD +E V++A + CG +A VRLA+WN+T++ KGFGYV+F+ E GA+ V Q ++ V GRP++VD+E G KGSFR DG + +K +
Sbjct: 230 DTVYVEGIPYSASEADVSKFFSDCGEVISVRMPRYQDSGRPRGYAHVVFASDAAAAKAFKKDGEYLQGRYLKVQQAQAP---RALQAQSQAAA---------APRPKGCRTVFVKNLPYDADEQMVTKAFSKCGEVAIVRLAIWNNTKQRKGFGYVDFADETGAQAAVERQANIKVAGRPVLVDYEVGRVKGSFRLADGQKYEKVA 423
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A225WYL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYL6_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.340e-52 Identity = 100/200 (50.00%), Postives = 133/200 (66.50%), Query Frame = 1
Query: 382 TVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETG--APKGSFRRQDG 975
TVYVEGIP+ +E D+ F CG + +VRMPR+QDSG+PRGYAHV F + + A DGQYL RYL++++ A +A + EK + N+KA + GCRTVF+K LPY+VEEDA+ EALA CG I SVRL +WNHT+KLKGFGYVEFS+E A R + + +G R +++ + APK SFR++DG
Sbjct: 64 TVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALKKALKLDGQYLFNRYLSIRRA------EAPRAVEMALKEKNQNTNKKAVK--GCRTVFIKQLPYEVEEDAIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR-RSGMKIGDRMVLISLDAAGSAPKASFRQRDG 254
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A485L4I6_9STRA (Aste57867_15645 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4I6_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.490e-52 Identity = 101/239 (42.26%), Postives = 141/239 (59.00%), Query Frame = 1
Query: 382 TVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPA-GCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETGAPKGSFRRQDG--------------------AQIKKTSADAGVGKGKAPKF 1035
T+YVEGI + DE + F CG + +VR+PRW DSG+PRGY HV F + A+ A DG+Y+ RYLT++Q +AP+ E+A + +++ +P GCRTV++K LPY+VEED V +ALA CG I SVRL MW HT+KLKGFGYVEF+ E GA + + + +G R +++D +TGAPK SFR+ +G + K++ A G K K PK
Sbjct: 77 TIYVEGISYDADESALVTHFSSCGHVKEVRLPRWHDSGKPRGYGHVVFETEAAAKKALALDGKYMLKRYLTIRQ---------AEAPR--GIERAVQNRKQSAKPTKGCRTVYIKQLPYEVEEDTVKQALASCGEILSVRLPMWGHTKKLKGFGYVEFADEAGAVKATK-RSGMKIGDRMVLIDLDTGAPKASFRQTNGQYWNKGEEGKASLAKRMGDKGKKKRSDASGGAEKAKKPKL 303
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A2D4BXX0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXX0_PYTIN) HSP 1 Score: 192 bits (488), Expect = 2.580e-52 Identity = 111/231 (48.05%), Postives = 142/231 (61.47%), Query Frame = 1
Query: 382 TVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPA--GCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETG--APKGSFRRQDGA------QIKKTSADAGVGKGKAPKFKVH 1044
TVYVEGIP+ DE D+ F CG + +VRMPR+QDSG+PRGYAHV F +S A DG+YL GRYLTV+Q + P T +K+ + A GCRTVF+K+LPYDVEE AV EALA CG I SVRL +WNHT+KLKGFGYVEFS+E A V+ + + +G R +++ ET APK SFR +DG + KK+ A K K+ ++ H
Sbjct: 150 TVYVEGIPYKADEGDLVSHFSSCGIVKEVRMPRYQDSGKPRGYAHVVFESASSIPKALKLDGKYLFGRYLTVKQA------------ERPRTLDVALQEQKSVKKAVKGCRTVFIKHLPYDVEEAAVREALASCGTILSVRLPLWNHTKKLKGFGYVEFSSEDEAIAAVK-RSGMKIGDRMVIISLETAGSAPKASFRLRDGRFWNKDEEAKKSLAKKLSDKPKSQRWSRH 367
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: W7TYE4_9STRA (31 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE4_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.850e-52 Identity = 104/206 (50.49%), Postives = 129/206 (62.62%), Query Frame = 1
Query: 382 TVYVEGIPWTCDEIDVRQFF--KGCGKITDVRMPRWQDSGRPRGYAHVAFAGSS-GARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETGAPKGSFRRQDGAQIKK 990
TVYVEGI + E D+ +FF KGCGK+ +VR+PRWQDSGRPRGYAH+ F + G A G + GRYLTVQ+ QAP+ + K P GC TVFVKNLPY+ EDAV EA CG+I +VRLA+W HT++ KGF YV+F E AE V+ Q ++ VGGR + VD+ETGAPK S+R DG Q K
Sbjct: 95 TVYVEGISYEATEDDLVRFFQDKGCGKVKEVRLPRWQDSGRPRGYAHIEFKKTDEGVAKALSLSGARMMGRYLTVQR---------AQAPKSLGVGGSLPLKDK---PPGCDTVFVKNLPYNTTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEIAVKKQGAIQVGGRKVFVDYETGAPKASYRAPDGRQWSK 288
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A6G0WFD1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFD1_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.750e-51 Identity = 93/198 (46.97%), Postives = 127/198 (64.14%), Query Frame = 1
Query: 382 TVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETGAPKGSFRRQDG 975
T+YVEG+ + DE + F CG + +VR+PR+QDSGRPRGYAHV F + A+ A DG+YL RYLT++ + P+ ++AR + + + GCRTVF+K LPYDV+E V EAL+ CG I SVRL +WNHT+KLKGFGYVEF+ E A + + + +G R +++D +TGAPK SFR DG
Sbjct: 79 TIYVEGMSYDADESALVSHFSSCGTVREVRLPRYQDSGRPRGYAHVVFDSEASAKKALALDGKYLLKRYLTIR---------PAETPR--GMDQARSSRKNVKITKGCRTVFIKQLPYDVDEATVKEALSSCGDIVSVRLPLWNHTKKLKGFGYVEFADEASAVEATK-KSGMKIGSRMVLIDLDTGAPKASFRNTDG 264
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A662XMP9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMP9_9STRA) HSP 1 Score: 188 bits (477), Expect = 4.750e-51 Identity = 100/200 (50.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 382 TVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFET--GAPKGSFRRQDG 975
TVYVEGIP+ DE D+ F CG + +VRMPR+QDSG+PRGYAHV F + A DG+YL RYL+V++ A ++ + E+++ A +KA + GCRTVF+K LPYDVEEDAV ALA CG + SVRL WNHT+KLKGFGYVEFS+E A R + + +G R +++ + GAPK SFR++DG
Sbjct: 125 TVYVEGIPYRADEGDLVTHFSSCGAVREVRMPRYQDSGKPRGYAHVVFEDEAALEKALKLDGKYLFSRYLSVRRA------EAPRSAELALKEQSQNATKKAVK--GCRTVFIKQLPYDVEEDAVRAALASCGTVTSVRLPFWNHTKKLKGFGYVEFSSEDEALAASR-RSGMKIGDRMVLISLDVAGGAPKASFRQRDG 315
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Match: A0A0P1AQN1_PLAHL (31 kDa chloroplastic n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQN1_PLAHL) HSP 1 Score: 186 bits (471), Expect = 5.750e-51 Identity = 95/200 (47.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 382 TVYVEGIPWTCDEIDVRQFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQMTVESNNHAVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSVGGRPLVVDFETG--APKGSFRRQDG 975
TVYVEGIP+ +E D+ +F CG + +VRMPR+QDSG+PRGYAHV F + A DG+YL RYL++++ +A ++ TEK++ A +K + GCRTV++K LPY+VEE + EALA CG I SVRL +WNHT+KLKGFGYVEFS+E A R + + +G R +++ + APK SFR++DG
Sbjct: 61 TVYVEGIPYEANESDLVTYFSSCGTVREVRMPRYQDSGKPRGYAHVVFDEEASLEMALKLDGKYLFKRYLSIRRAETP------RAVEQALTEKSQNATKKVIK--GCRTVYIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSENEALAAAR-RSGMKIGDRMVIISLDASGSAPKSSFRQRDG 251 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1757.5293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1757.5293.1 >prot_Ecto-sp13_S_contig1757.5293.1 ID=prot_Ecto-sp13_S_contig1757.5293.1|Name=mRNA_Ecto-sp13_S_contig1757.5293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=350bp MVKRRRSSGPPAAAYPEAAGNSSTSFSQSPDQPPATAVEEATDAEGRQRCback to top mRNA from alignment at Ecto-sp13_S_contig1757:10990..14507- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1757.5293.1 ID=mRNA_Ecto-sp13_S_contig1757.5293.1|Name=mRNA_Ecto-sp13_S_contig1757.5293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3518bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1757:10990..14507- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1757:10990..14507- >mRNA_Ecto-sp13_S_contig1757.5293.1 ID=mRNA_Ecto-sp13_S_contig1757.5293.1|Name=mRNA_Ecto-sp13_S_contig1757.5293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1050bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1757:10990..14507- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |