mRNA_Ecto-sp13_S_contig17509.5262.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17509.5262.1
Unique NamemRNA_Ecto-sp13_S_contig17509.5262.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: D7G161_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G161_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.490e-19
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHSKSL DWYWEDTSEWTLDYPPLFGYFQ
Sbjct:   25 EVHRNWLAITHSKSLVDWYWEDTSEWTLDYPPLFGYFQ 62
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: A0A1E3Q0B2_LIPST (Alpha-1,3-glucosyltransferase n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3Q0B2_LIPST)

HSP 1 Score: 76.3 bits (186), Expect = 4.360e-15
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHSK L +WY+EDTSEWTLDYPP F YF+
Sbjct:   35 EVHRNWLAITHSKPLNEWYYEDTSEWTLDYPPFFAYFE 72
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: A0A0B6Y0P2_9EUPU (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Y0P2_9EUPU)

HSP 1 Score: 70.1 bits (170), Expect = 1.170e-14
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHS  +  WY EDTSEWTLDYPPLF +F+
Sbjct:   26 EVHRNWLAITHSLPMQKWYLEDTSEWTLDYPPLFAWFE 63
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: A0A0F7ZZ21_9HYPO (Alpha-1,3-glucosyltransferase n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZZ21_9HYPO)

HSP 1 Score: 73.9 bits (180), Expect = 2.840e-14
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHS SL++WY+E TSEWTLDYPP F YF+
Sbjct:   32 EVHRNWLAITHSLSLSEWYYEKTSEWTLDYPPFFAYFE 69
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: A0A7S0EI05_9CRYP (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EI05_9CRYP)

HSP 1 Score: 70.9 bits (172), Expect = 3.030e-14
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAIT S  ++ WY+EDTSEWTLDYPPLFG+F+
Sbjct:   21 EVHRNWLAITSSLPISRWYYEDTSEWTLDYPPLFGWFE 58
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: M7SJY3_EUTLA (Alpha-1,3-glucosyltransferase n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7SJY3_EUTLA)

HSP 1 Score: 69.7 bits (169), Expect = 3.250e-14
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHS S  +WY+E TSEWTLDYPP F YF+
Sbjct:   32 EVHRNWLAITHSLSPWEWYYEKTSEWTLDYPPFFAYFE 69
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: A0A1B0GNZ1_PHLPP (Alpha-1,3-glucosyltransferase n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0GNZ1_PHLPP)

HSP 1 Score: 72.0 bits (175), Expect = 3.770e-14
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHS  +  WY+EDTSEWTLDYPP F YF+
Sbjct:   26 EVHRNWLAITHSLPMGRWYYEDTSEWTLDYPPFFAYFE 63
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: A0A6G1L7C4_9PEZI (Alpha-1,3-glucosyltransferase n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1L7C4_9PEZI)

HSP 1 Score: 73.6 bits (179), Expect = 3.880e-14
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHS SL DWY+E TS+WTLDYPP F YF+
Sbjct:   32 EVHRNWLAITHSLSLKDWYYEKTSDWTLDYPPFFAYFE 69
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: A0A1I8D1M2_9BILA (Alpha-1,3-glucosyltransferase n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8D1M2_9BILA)

HSP 1 Score: 73.6 bits (179), Expect = 3.890e-14
Identity = 26/38 (68.42%), Postives = 35/38 (92.11%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLA+TH+K L++WY+E+TS+WTLDYPP F YF+
Sbjct:   40 EVHRNWLAVTHNKKLSEWYYEETSQWTLDYPPFFAYFE 77
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BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Match: G3J5X8_CORMM (Alpha-1,3-glucosyltransferase n=7 Tax=Cordycipitaceae TaxID=474943 RepID=G3J5X8_CORMM)

HSP 1 Score: 73.6 bits (179), Expect = 3.900e-14
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 1 
Query:    7 KVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQ 120
            +VHRNWLAITHS  L++WY+EDTS+WTLDYPP F YF+
Sbjct:   33 EVHRNWLAITHSLPLSEWYYEDTSQWTLDYPPFFAYFE 70
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17509.5262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G161_ECTSI1.490e-1994.74Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus T... [more]
A0A1E3Q0B2_LIPST4.360e-1578.95Alpha-1,3-glucosyltransferase n=1 Tax=Lipomyces st... [more]
A0A0B6Y0P2_9EUPU1.170e-1473.68Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=A... [more]
A0A0F7ZZ21_9HYPO2.840e-1476.32Alpha-1,3-glucosyltransferase n=1 Tax=Hirsutella m... [more]
A0A7S0EI05_9CRYP3.030e-1473.68Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=H... [more]
M7SJY3_EUTLA3.250e-1473.68Alpha-1,3-glucosyltransferase n=1 Tax=Eutypa lata ... [more]
A0A1B0GNZ1_PHLPP3.770e-1473.68Alpha-1,3-glucosyltransferase n=1 Tax=Phlebotomus ... [more]
A0A6G1L7C4_9PEZI3.880e-1476.32Alpha-1,3-glucosyltransferase n=1 Tax=Teratosphaer... [more]
A0A1I8D1M2_9BILA3.890e-1468.42Alpha-1,3-glucosyltransferase n=1 Tax=Rhabditophan... [more]
G3J5X8_CORMM3.900e-1473.68Alpha-1,3-glucosyltransferase n=7 Tax=Cordycipitac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17509contigEcto-sp13_S_contig17509:3302..3430 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score88.6
Seed ortholog evalue7.8e-16
Seed eggNOG ortholog2880.D7G161
Preferred nameALG8
Model size129
KEGG koko:K03849
KEGG ReactionR06263
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000030,GO:0000033,GO:0000902,GO:0000904,GO:0001703,GO:0002064,GO:0003381,GO:0003382,GO:0003383,GO:0003384,GO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0006928,GO:0007275,GO:0007369,GO:0007377,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010004,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0030029,GO:0030048,GO:0030154,GO:0030855,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032989,GO:0034645,GO:0036211,GO:0042175,GO:0042281,GO:0042283,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046527,GO:0048468,GO:0048598,GO:0048856,GO:0048869,GO:0060429,GO:0070085,GO:0070252,GO:0071704,GO:0071840,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons1
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2576@1,KOG2576@2759
EC2.4.1.265
Cds size129
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462911.5752025-CDS-Ecto-sp13_S_contig17509:3301..34301681462911.5752025-CDS-Ecto-sp13_S_contig17509:3301..3430Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17509 3302..3430 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17509.5262.1prot_Ecto-sp13_S_contig17509.5262.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17509 3302..3430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17509.5262.1

>prot_Ecto-sp13_S_contig17509.5262.1 ID=prot_Ecto-sp13_S_contig17509.5262.1|Name=mRNA_Ecto-sp13_S_contig17509.5262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp
RPKVHRNWLAITHSKSLADWYWEDTSEWTLDYPPLFGYFQVR*
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mRNA from alignment at Ecto-sp13_S_contig17509:3302..3430+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17509.5262.1 ID=mRNA_Ecto-sp13_S_contig17509.5262.1|Name=mRNA_Ecto-sp13_S_contig17509.5262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=129bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17509:3302..3430+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGGCCGAAGGTCCACCGTAACTGGCTAGCGATAACGCACTCAAAGTCCTT
GGCAGACTGGTACTGGGAGGATACATCGGAGTGGACGCTAGACTACCCGC
CCCTCTTTGGATACTTCCAGGTGAGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17509:3302..3430+

>mRNA_Ecto-sp13_S_contig17509.5262.1 ID=mRNA_Ecto-sp13_S_contig17509.5262.1|Name=mRNA_Ecto-sp13_S_contig17509.5262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=129bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17509:3302..3430+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGGCCGAAGGTCCACCGTAACTGGCTAGCGATAACGCACTCAAAGTCCTT
GGCAGACTGGTACTGGGAGGATACATCGGAGTGGACGCTAGACTACCCGC
CCCTCTTTGGATACTTCCAGGTGAGGTAG
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