mRNA_Ecto-sp13_S_contig17503.5260.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: D7G7V5_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V5_ECTSI) HSP 1 Score: 1151 bits (2978), Expect = 0.000e+0 Identity = 602/656 (91.77%), Postives = 611/656 (93.14%), Query Frame = 1
Query: 1 RADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPARMPQMAGNDPVDKVLLGAASIKLLRKRELEDARRRAEERLADPRAYELRKLVTVEGLLHLDMEKFHPFGSVSGVTPRYTDAALHPDLANVRTDTGFPVIKAIEERRLSSRASSSTTRPRKQRKAKETATPGSHQTRSXXXXXXXXXXXGLLDDDLSTCSLDDASASTTTGGVRNGSGDGRSDTSGVDTGESVTRPTKSLLPPKASGSSEREENVLLRLESLDVSGARSERQKHALGLRSAYMTHSSGREPAFTMLSDTMVGTVDYILFSADCLLPTQVLSIPEIGSLVGRDIQQTELSPAPGLWAPSEWQGECGKEGYMGEWSPYLRENPLRVNHRIPNELFPSDHLMLMANLVYFEPRCSSTWR 1968
RADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQA GLTRSVEAFNSDFSLPIVMCGTMNC PSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRW APSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP RMPQMAGNDPVDKVLLGAASIKLLRKRELEDARRRAEERLADPRAYELRKLV VEGLL L MEK HPFGSVSGVTPRYTDAALHPDLANVRTDTGFPVIKAIEERRLSS A+ XXXXXXXXXX GLLDDDLS SL+DASASTT GG RNGSG+GRSDTSGVDTGESVTRPTKSLLPPKA GSS+REEN+LLRL+SL+VSGARSERQKHALGLRSAYMTHSSG EPAFTMLSDTMVGTVDYI FSADCLLPTQVLSIPE+GSLV RDIQQTELSPAPGLWAPSEWQGECG+E YMGEWSPYLRENPLRV HRIPNELFPSDHLMLMANLVYFEPRCSSTWR
Sbjct: 101 RADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQAHGLTRSVEAFNSDFSLPIVMCGTMNCAPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWPAPSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPVRMPQMAGNDPVDKVLLGAASIKLLRKRELEDARRRAEERLADPRAYELRKLVKVEGLLDLGMEKIHPFGSVSGVTPRYTDAALHPDLANVRTDTGFPVIKAIEERRLSSGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLLDDDLS--SLEDASASTT-GGFRNGSGEGRSDTSGVDTGESVTRPTKSLLPPKACGSSQREENILLRLDSLNVSGARSERQKHALGLRSAYMTHSSGGEPAFTMLSDTMVGTVDYIFFSADCLLPTQVLSIPEMGSLVRRDIQQTELSPAPGLWAPSEWQGECGEERYMGEWSPYLRENPLRVKHRIPNELFPSDHLMLMANLVYFEPRCSSTWR 753
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: A0A6H5L283_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L283_9PHAE) HSP 1 Score: 1017 bits (2629), Expect = 0.000e+0 Identity = 520/593 (87.69%), Postives = 536/593 (90.39%), Query Frame = 1
Query: 190 NRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPARMPQMAGNDPVDKVLLGAASIKLLRKRELEDARRRAEERLADPRAYELRKLVTVEGLLHLDMEKFHPFGSVSGVTPRYTDAALHPDLANVRTDTGFPVIKAIEERRLSSRASSSTTRPRKQRKAKETATPGSHQTRSXXXXXXXXXXXGLLDDDLSTCSLDDASASTTTGGVRNGSGDGRSDTSGVDTGESVTRPTKSLLPPKASGSSEREENVLLRLESLDVSGARSERQKHALGLRSAYMTHSSGREPAFTMLSDTMVGTVDYILFSADCLLPTQVLSIPEIGSLVGRDIQQTELSPAPGLWAPSEWQGECGKEGYMGEWSPYLRENPLRVNHRIPNELFPSDHLMLMANLVYFEPRCSSTWR 1968
++LGEHEE+RSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSD SESLSPAIDTYRLLWVPGGSRFLPGE+VDAHEAGCV YDLVK ESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP RMPQMAGNDPVD+VLLGAASIKLLRKRELEDARRRAEERLA+PRAYELRKLV VEGLL L MEK HPFGSVSGVTPRYTDA+LHPDLANVRTDTGFPVIKAIEERR+ GSHQTRS G LDDDL TCSLD ASASTTTGG RNGSG+GRSDTSG GESVTRPTKS LPPKA GS REEN+LLRLESLDVSGARSERQKHALGLRSAYMTHSSG EPAFTMLSDTMVGTVDYI FSADCLLPTQVLSIPE+GSLVGRDIQQT+LSP PGLWAPSEWQGECG+EGYMGEWSPYLRENPLRV HR+PNE+FPSDHLMLMANL+YFEPRCSSTWR
Sbjct: 8 DQLGEHEENRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDYSESLSPAIDTYRLLWVPGGSRFLPGETVDAHEAGCVEYDLVKAESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPVRMPQMAGNDPVDRVLLGAASIKLLRKRELEDARRRAEERLANPRAYELRKLVKVEGLLDLGMEKIHPFGSVSGVTPRYTDASLHPDLANVRTDTGFPVIKAIEERRMXXXXXXXXXXXXXXXXXXXXXXAGSHQTRSNDEQVTSSSTKGPLDDDLCTCSLDGASASTTTGGFRNGSGEGRSDTSGAGAGESVTRPTKSSLPPKACGSFPREENILLRLESLDVSGARSERQKHALGLRSAYMTHSSGGEPAFTMLSDTMVGTVDYIFFSADCLLPTQVLSIPEMGSLVGRDIQQTDLSPVPGLWAPSEWQGECGEEGYMGEWSPYLRENPLRVKHRVPNEIFPSDHLMLMANLLYFEPRCSSTWR 600
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: A0A662Y7A2_9STRA (Fibronectin type-III domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y7A2_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.780e-43 Identity = 107/296 (36.15%), Postives = 158/296 (53.38%), Query Frame = 1
Query: 4 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQR---TSRAAMHR--EGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPA--IDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP 870
AD++CLQ++D + WW+ QL AGYDS++ TS AA+ +G+V A++++ F LFRS E+ LN + ++ D +LA +A DNVAL+ L+PW+ S PS C+V TQL+ + +R LQA L R F++DF LPIV+ GT N PSS Y + G P P +P+V+ S S+ +V W P+ S SL P+ I Y++ SR + +++L +S +FVV LS+ + Y+ RV A N G GPWS+ S P
Sbjct: 86 ADIMCLQEMDEYDDWWAAQLALAGYDSVYASACPSTSAAALSEIDDGLVTAFRKETFQLFRSSEVHLNDVCDNITDLNLAARAK-QDNVALLLCLQPWESSALPSALCVVNTQLAAGPTPQMELVRVLQAEYLCRQTAIFSADFQLPIVLAGTFNATPSSDVYHTIITGRRRPVAEAPAAPDRPVVDDPSPSSLKVTWKPPTPSSTSLVPSAPILEYKVAVKNCASRSMG-----------FMHELSVADSSAT--------SFVVPSLSANMTYQLRVMARNEFGWGPWSDPSAP 361
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: W2QR66_PHYPN (Fibronectin type-III domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QR66_PHYPN) HSP 1 Score: 172 bits (437), Expect = 1.320e-42 Identity = 101/296 (34.12%), Postives = 154/296 (52.03%), Query Frame = 1
Query: 4 ADVLCLQDVDCFHQWWSPQLTSAGYDSLF-----KQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPAIDT--YRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP 870
AD++CLQ+VD + WW+ +L AGYDS++ T+ EG+V A+++ F LFRS E+ LN L + D +LA +A D +ALM L+PW+ S PS C+V TQL+ + +R LQ L R + FN+DF LP+++ GT N VPS+ Y + G P P PG+P+++ ++S+ R+ W P S +P+ Y++ S+ A +Y+L G +S F V+ LS+ + Y+FRV A N+ G G WS+ S P
Sbjct: 81 ADIMCLQEVDEYDDWWAAELAIAGYDSIYATSAASDSTTVTKDIDEGLVTAFRKSTFQLFRSAEVHLNDLCANINDANLAARAK-QDKIALMVCLQPWETSTLPSALCVVNTQLASGATSELERVRVLQTEYLCRQIAVFNADFQLPVLLAGTFNAVPSNDVYHTILTGRRRPVPEAPAAPGRPVIDDPTSSSLRISWEPPQPSLTSTTPSTPVLEYKIAVKNCTSK-----------ASGFLYEL-SVPDGAAKS-------FTVTSLSASMTYQFRVMARNAYGWGYWSQPSAP 356
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: A0A329SCY1_9STRA (Fibronectin type-III domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SCY1_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.800e-42 Identity = 105/299 (35.12%), Postives = 156/299 (52.17%), Query Frame = 1
Query: 4 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFK-----QRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPA--IDTYRLL---WVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP 870
AD++CLQ+VD + WW+ +L AGYDS++ T+ A +G+V A+++ F LFRS E+ LN L + D +LA +A D +AL+ L+PW+ S PS C+V TQL+ + +R LQ L R + FN+DF LPIV+ GT N PSS Y + G P P PG+P+++ ++S+ RV W P SL+P+ I Y++ V S FL Y+L + ++F+V+ LS+ + Y+FRV A N G G WS+ S P
Sbjct: 81 ADIMCLQEVDEYDDWWAAELAIAGYDSIYATSATPDSTTVAKDIDDGLVTAFRKSTFQLFRSTELHLNDLCANINDANLAARAK-QDKLALLVCLQPWETSALPSALCVVNTQLAAGATPELERVRVLQTEYLCRQLTVFNADFQLPIVLAGTFNATPSSDVYHTILTGRRRPVPEAPAAPGRPVIDDPTSSSLRVSWEPPQRSLTSLTPSTPILEYKIAVKNCVSQASGFL--------------YELPVPDGAA--------QSFIVTSLSASMTYQFRVMAGNEYGWGDWSQPSAP 356
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: A0A421FB39_9STRA (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FB39_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.410e-41 Identity = 103/298 (34.56%), Postives = 155/298 (52.01%), Query Frame = 1
Query: 4 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHR-------EGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPAIDT--YRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP 870
AD++CLQ++D + WW+ +L +AGYDS++ TS A EG+V A+++ F LFRS E+ LN L + D +LA +A D +ALM ++PW+ S PS C+V TQL+ + +R LQ L R + FN+DF LP+V+ GT N PSS Y + G P P P +P ++ ++S+ RV W PS + SL+P++ Y++ SR + +Y+L G S FV + LS+ + Y+FR+ A N G G WS+ S P
Sbjct: 79 ADIMCLQEIDEYDDWWAAELATAGYDSIYA--TSAAPQSAVVVNAIDEGLVTAFRKSTFQLFRSEEVHLNDLCANINDPNLAARAR-QDRLALMVCVQPWETSALPSALCVVNTQLAAGPTPEMELVRVLQTEHLCRQLAVFNADFQLPVVLAGTFNATPSSDVYHTILTGRRRPVPEAPTAPSRPNIDEETSSSLRVSWQPPSPSATSLTPSVPILEYKVAVKNCASRSMG-----------FLYEL-SVPDGTATS-------FVTTSLSADMMYQFRIMARNEHGWGHWSQPSTP 354
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: G4ZS96_PHYSP (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZS96_PHYSP) HSP 1 Score: 168 bits (425), Expect = 6.410e-41 Identity = 104/294 (35.37%), Postives = 150/294 (51.02%), Query Frame = 1
Query: 4 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRT--SRAAMHRE---GVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP 870
AD++CLQ+VD + WW+ +L +AGYDS++ S AA+ +E G+V A+++ F LFRS E+ LN L + D +LA +A D +AL+ L+PW+ S PS C+ TQL+ + +R LQ L R V FN+DF LPIV+ GT N PSS Y + G P P P +P V+ + S+ RV W P SL+ + + A + +Y+L G +S FVV+ LS+ + Y+FRV A N G G WS+ S P
Sbjct: 81 ADIMCLQEVDEYDDWWAVELATAGYDSIYATSAAPSSAAVAKEIDEGLVTAFRKSTFQLFRSSEVHLNDLCANINDPNLAARAK-QDKLALLVSLQPWETSALPSALCVANTQLAAGATPEMERVRVLQTEYLCRQVAVFNADFQLPIVLAGTFNATPSSDVYHTILTGRRRPVPEAPAAPSRPEVDEPTASSLRVNWQPPQPSVTSLTSSAPVL---------EYKVAVKNCASKTSGFLYEL-SVPDGAAKS-------FVVASLSANMTYQFRVMARNEHGWGHWSQPSAP 356
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: A0A2R5GWN2_9STRA (Centrosomal protein of 19 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWN2_9STRA) HSP 1 Score: 167 bits (422), Expect = 7.530e-40 Identity = 108/307 (35.18%), Postives = 158/307 (51.47%), Query Frame = 1
Query: 1 RADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGP-PGKPLVEPISTSAARVRWSAPSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPARMPQMAGNDPVDKVL 918
+ DVLCLQ+VD F WW P+L AGYD ++ QR R H++GV + R F LFRS ++ N G + + + DNV ++ ++PW+DSDHPS + QL +A++ Q L R+VE FN+DF LP++MCG+ N + S Y I+ RG RPG +P + ++ S RVRW APS S AI Y + GG+ + V +D G V E N VSGLS+G+ YEF V+A++++GQG +S+ + P A P++ +L
Sbjct: 109 KPDVLCLQEVDNFDLWWQPRLAEAGYDGIYCQRGRR---HKDGVATFFSRSKFQLFRSETIDFNDAGRFLGEAKPSSRLQ-QDNVGVIVAIQPWEDSDHPSALLVSNVQLVTPTDPDLEAVQRKQVLMLLRTVERFNADFQLPVLMCGSFNFLQQSDLYTIVTRGKFPFQLTRPGTIDERPEAKVLAHSHVRVRWKAPS----SGDAAIQGYVIRRRCGGNTSRGFDDPAFFPLSAVEHD------GLVWREAN------VSGLSAGLTYEFVVAAVSAVGQGDFSQPTPPVTTRVNAQLPPINDIL 395
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: K3WS66_GLOUD (Fibronectin type-III domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS66_GLOUD) HSP 1 Score: 164 bits (414), Expect = 2.420e-39 Identity = 105/293 (35.84%), Postives = 155/293 (52.90%), Query Frame = 1
Query: 4 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPAIDTYRLLWVPGGSR---FLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPA 873
AD++CLQ+VD + WW+ +L S GYDS++ +R+ + +GVV A++RDVF LF S +ELN L D +L +A NVAL+ L+PW+ S PS CI TQL G ++IR LQA L R + FN++F LPI++ GT N +PSS Y ++ G P P P +P+++ + ++ V WS P++D ES I Y++ S F+ V AH + F ++ LSS V Y+FRV+A N+ G WS S+P+
Sbjct: 116 ADIMCLQEVDDYDDWWAAKLISNGYDSVYARRSGSSM--DDGVVTAFRRDVFQLFCSKAVELNDLCATIGDPNLQARAKQG-NVALLVCLQPWETSKLPSALCIANTQLVS--GPTLESIRVLQAEYLCRQIAIFNANFHLPILLAGTFNALPSSDVYHVIHTGRRRPSPQAPITPERPILQEPTPTSITVTWSTPTNDVESAEAPILEYKVAVKNCASATIGFMHEIVVPAH-----------------------VNEFTMTMLSSDVTYQFRVAARNAHG---WSHFSQPS 377
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Match: H3GGQ2_PHYRM (Fibronectin type-III domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGQ2_PHYRM) HSP 1 Score: 157 bits (397), Expect = 3.190e-37 Identity = 101/296 (34.12%), Postives = 153/296 (51.69%), Query Frame = 1
Query: 4 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRT-----SRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDDSESLSPA--IDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEP 870
AD++CLQ+VD + WW+ +L +AGYDS++ + S A EG+V A+++ F LFRS E+ LN L + D +LA +A D +AL+T S PS CIV TQL+ + +R LQ L R + FN+DF LPIV+ GT N PSS Y + G P P +P+V+ +++S+ R+ W+ P +L+P+ I Y++ S+ +Y+L T+ +++VVS LS+ + Y+FRV A N G G WS+ S P
Sbjct: 81 ADIMCLQEVDEYDDWWAVELATAGYDSIYATSSAPDSDSVAKEIDEGLVTAFRKSTFQLFRSTEVHLNELCANINDPNLAARAK-QDKLALLT-------SVMPSALCIVNTQLAAGPTADLERVRVLQTEYLCRRLAVFNADFQLPIVLAGTFNATPSSDVYHTILTGRRRPVAEAPAAPSRPVVDDLTSSSLRITWNPPPPSLTTLTPSAPILEYKVAVKNCASK-----------TSGFLYELSVTDG--------TAKSYVVSSLSANMTYQFRVMARNEHGWGHWSQPSAP 349 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17503.5260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17503.5260.1 >prot_Ecto-sp13_S_contig17503.5260.1 ID=prot_Ecto-sp13_S_contig17503.5260.1|Name=mRNA_Ecto-sp13_S_contig17503.5260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=657bp RADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRback to top mRNA from alignment at Ecto-sp13_S_contig17503:369..2574- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17503.5260.1 ID=mRNA_Ecto-sp13_S_contig17503.5260.1|Name=mRNA_Ecto-sp13_S_contig17503.5260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17503:369..2574- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17503:369..2574- >mRNA_Ecto-sp13_S_contig17503.5260.1 ID=mRNA_Ecto-sp13_S_contig17503.5260.1|Name=mRNA_Ecto-sp13_S_contig17503.5260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1971bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17503:369..2574- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |