mRNA_Ecto-sp13_S_contig1749.5253.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1749.5253.1
Unique NamemRNA_Ecto-sp13_S_contig1749.5253.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: D7FL69_ECTSI (Hydroxyacyl-Coenzyme A dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL69_ECTSI)

HSP 1 Score: 557 bits (1436), Expect = 1.210e-199
Identity = 285/292 (97.60%), Postives = 287/292 (98.29%), Query Frame = 1 
Query:    1 MMLASSTRLLSGGASRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            MMLASSTRLL  GASRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDS+DAGKKRID+SLSKMLD KVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDP VFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYP EPSF
Sbjct:    1 MMLASSTRLLGHGASRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSIDAGKKRIDQSLSKMLDRKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPVVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPDEPSF 292
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BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: A0A835YNC1_9STRA (Hydroxyacyl-coenzyme A dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC1_9STRA)

HSP 1 Score: 358 bits (920), Expect = 1.940e-121
Identity = 176/268 (65.67%), Postives = 210/268 (78.36%), Query Frame = 1 
Query:   73 STIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            ++I +VGV+GLGLMGHG+VQ  +MA    Y VV ++ ++D++ AGK RI+ S+ + L   V +G LTE DA +Q     SRISY +D + LADCDLV+EAITENP IK  L+ +L  +T+P CILASNTSSL I +MA ASGRP  VVGLHFFNPVQ+MKLVEVVR D TDPAVFE+C+++  ++GKHPVSC DTPGFIVNRLLVP LAQ MLM DRGD SVEDIDKSMELGAGHPMGPL LADYVGLD CL IL GWV  +P EP+F
Sbjct:    3 TSINKVGVIGLGLMGHGIVQAASMAPGKRYEVVGLEATEDAIGAGKGRIEASIKRQLSRSVARGKLTEADAESQGADYLSRISYTTDRAGLADCDLVIEAITENPAIKLPLYTELGLLTKPSCILASNTSSLKIADMAGASGRPDRVVGLHFFNPVQVMKLVEVVRTDATDPAVFEQCRAFVNSIGKHPVSCKDTPGFIVNRLLVPALAQAMLMVDRGDASVEDIDKSMELGAGHPMGPLALADYVGLDTCLFILQGWVDNFPSEPAF 270
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BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: A0A7S2SEQ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEQ6_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.020e-106
Identity = 164/282 (58.16%), Postives = 212/282 (75.18%), Query Frame = 1 
Query:   31 SGGASRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            +   +RR   A  +  I +VG+VGLGLMGHG+ Q   MA+S  Y VVAV+ S++++  G++RI  S+SK+L  +V KG LTE +AA ++     +++Y++D++ L +CDL+VEAI E+  IK   ++ L +  +P+ I ASNTSSLS+KEMA ASGRP   VGLHFFNPVQLMKLVEV+R + T+P  FE  K WAQ++GK  VSC DTPGFIVNRLLVP +AQGMLM DR + SVEDID SM+LGAGHPMGPLTLADYVGLD CLSIL+GW +KYP+E +F
Sbjct:   24 AAAVARRLSTAPPVQEITKVGMVGLGLMGHGIAQ---MAASSGYQVVAVETSQEALQQGQERITSSVSKLLSKQVAKGKLTEQEAAEKEASTLGQLTYSTDLNDLDNCDLIVEAIIEDVSIKLPFYEALGKTVKPEAIFASNTSSLSVKEMADASGRPDRFVGLHFFNPVQLMKLVEVIRTEDTNPEAFELSKHWAQSIGKTTVSCSDTPGFIVNRLLVPAMAQGMLMVDRQEASVEDIDVSMQLGAGHPMGPLTLADYVGLDTCLSILEGWREKYPNEAAF 302
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BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: H3G9F5_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3G9F5_PHYRM)

HSP 1 Score: 317 bits (813), Expect = 5.980e-105
Identity = 162/279 (58.06%), Postives = 205/279 (73.48%), Query Frame = 1 
Query:   58 LARELST------IKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            LAR L+T      I++VG+VGLGLMGHG+ Q  A A    + VVA+D +   +++G KRI+ SL+K+L   VKKG +T+  A  Q      RI+  +++ ALADCDLV+EAI EN E+K   + +L +V +P  ILASNTSSL+I + A +SGR S VVGLHFFNPVQLMKLVEV+R D TDP VF+ CK W   +GKHPVSC DTPGFIVNRLLVP LAQ + +Y+RGD + EDID SM+ GAGHPMGP+TLADYVGLD  L IL+GWV+ +P+EP+F
Sbjct:   17 LARALATSAGDVKIQKVGMVGLGLMGHGIAQTAASAG---FDVVALDANPQGLESGMKRIEGSLTKLLSRGVKKGTITQQQADDQAAAALGRITPTTELQALADCDLVIEAIVENVEVKKEFYANLGQVAKPSAILASNTSSLAISDFAGSSGRASQVVGLHFFNPVQLMKLVEVIRTDATDPKVFDACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLAQAISLYERGDATKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAF 292
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BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: A0A8K1CEX9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEX9_PYTOL)

HSP 1 Score: 316 bits (809), Expect = 3.040e-104
Identity = 163/292 (55.82%), Postives = 208/292 (71.23%), Query Frame = 1 
Query:   16 STRLLSGGASRRWQLARELST-----IKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            ST   +   +  +QL R  ++      K+VG+VGLGLMGHG+ Q  A A    + VVA+D ++  +DAG KRI+ SL+K+    VKKG ++E DA  +     + I+  +    LADCDLV+EAI EN ++K   + +LA++ +P  I ASNTSSL+I + A +SGRP  VVGLHFFNPVQ+MKLVEVVR D TDPAVFE CK W   +GKHPVSCVDTPGFIVNRLLVP LAQ + MY+RGD + EDID SM+ GAGHPMGP+TLADYVGLD  L IL+GWV+ +P+EP+F
Sbjct:   11 STARRASAVAANFQLTRAFASGNDIEFKKVGMVGLGLMGHGIAQTAASAG---FQVVALDMNQKGLDAGMKRIEGSLTKIQARNVKKGTISEEDAQKKIAETLALITPTTKTEDLADCDLVIEAIVENVDVKKEFYANLAKIVKPSAIFASNTSSLAISDFAGSSGRPEKVVGLHFFNPVQIMKLVEVVRTDDTDPAVFEACKQWVHAIGKHPVSCVDTPGFIVNRLLVPYLAQAIAMYERGDATKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAF 299
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BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: A0A662Y269_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y269_9STRA)

HSP 1 Score: 316 bits (809), Expect = 3.040e-104
Identity = 158/266 (59.40%), Postives = 197/266 (74.06%), Query Frame = 1 
Query:   79 IKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            IK+VG+VGLGLMGHG+ Q  A A    + VVA+D +   + +G KRI+ SL K+L   VKKG LT+  A  Q     +RI+  ++++ L DCDLV+EAI EN E+K   + +L RV +P  ILASNTSSL+I + A +SGR   VVGLHFFNPVQLMKLVEVVR D TDPA+FE CK W   +GKHPVSC DTPGFIVNRLLVP L+Q + +Y+RGD + EDID SM+ GAGHPMGP+TLADYVGLD  L IL+GWV+ +P+EP+F
Sbjct:   37 IKKVGMVGLGLMGHGIAQTAASAG---FDVVALDSNAKGLKSGMKRIEGSLGKLLGRSVKKGTLTQAQADEQAAATLARITPTTELADLGDCDLVIEAIVENVEVKKEFYANLGRVAKPSAILASNTSSLAISDFAGSSGRAPQVVGLHFFNPVQLMKLVEVVRTDATDPAIFEACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLSQAIALYERGDATKEDIDVSMQYGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAF 299
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BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: K3X1E9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1E9_GLOUD)

HSP 1 Score: 315 bits (806), Expect = 8.110e-104
Identity = 162/278 (58.27%), Postives = 201/278 (72.30%), Query Frame = 1 
Query:   43 SRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            +R +  A +   IK+VG+VGLGLMGHG+ Q  A A    + VVAVD ++  +DAG KRI+ SL+K++   VKKG +TE DA  Q       I+  +    LADCDLV+EAI EN  +K   + +L R+ +P  I ASNTSSL+I + A +SGR S VVGLHFFNPVQLMKLVEVVR D TDPAVFE  K+W   +GKHPVSC DTPGFIVNRLLVP LAQ + +Y+RGD + EDID SM+ GAGHPMGP+TLADYVGLD  L IL+GWV+ +P+EP+F
Sbjct:   23 TRSFASATDKFEIKKVGMVGLGLMGHGIAQTAAQAG---FQVVAVDMNQAGLDAGMKRIEGSLNKIVGRNVKKGTITEEDAQQQIAKTLGLITPTTSQDDLADCDLVIEAIIENVNVKKDFYANLGRIVKPSAIFASNTSSLAISDFAGSSGRASQVVGLHFFNPVQLMKLVEVVRTDATDPAVFEASKNWVHAIGKHPVSCKDTPGFIVNRLLVPYLAQAIALYERGDATKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNEPAF 297
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: A0A5D6YQW8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQW8_9STRA)

HSP 1 Score: 315 bits (806), Expect = 8.380e-104
Identity = 164/286 (57.34%), Postives = 207/286 (72.38%), Query Frame = 1 
Query:   19 TRLLSGGASRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            TR LS  +S  ++       IK+VG+VGLGLMGHG+ Q  A A    + VVA+D  +  ++AG KRI+ SL+K++   VKKG L+E  A AQ     +RI+  +D  ALADCDLV+EAI EN ++K   + +L R+ +P  I ASNTSSL+I + A ASGR + VVGLHFFNPVQLMKLVEVVR D TD AVF+  K+W   +GKHPVSC DTPGFIVNRLLVP LAQ + +Y+RGD S EDID SM+ GAGHPMGP+TLADYVGLD  L IL+GWV+ +P++P+F
Sbjct:   23 TRALSSASSGDFE-------IKKVGMVGLGLMGHGIAQTAAQAG---FQVVALDMHEAGLEAGMKRIEGSLAKLVGRAVKKGALSEDAAQAQVRDTLARITPTTDQQALADCDLVIEAIVENVDVKKDFYANLGRLVKPSAIFASNTSSLAISDFAGASGRAAQVVGLHFFNPVQLMKLVEVVRTDATDAAVFDAAKNWVHAIGKHPVSCKDTPGFIVNRLLVPYLAQAIALYERGDASKEDIDVSMQFGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNDPAF 298
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: A0A3M6VA69_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA69_9STRA)

HSP 1 Score: 313 bits (803), Expect = 1.900e-103
Identity = 157/266 (59.02%), Postives = 198/266 (74.44%), Query Frame = 1 
Query:   79 IKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            I++VG+VGLGLMGHG+ Q  A A    + VVA+D +   + +G KRI+ SLSK+    VKKG +T+  A  Q     +RI+  +++  L DCDLV+EAI EN ++K   + DL +V +P  ILASNTSSL+I + A +SGR S VVGLHFFNPVQLMKLVEVVR DVTDP +F+ CK W   +GKHPVSC DTPGFIVNRLLVP LAQ + +Y+RGD + EDID SM+LGAGHPMGP+TLADYVGLD  L IL+GWV+ +P+EP+F
Sbjct:   29 IQKVGMVGLGLMGHGIAQTAAAAG---FDVVALDANPKGLQSGMKRIEMSLSKLRGRDVKKGTITQQQADDQIAAALARITPTTELDGLTDCDLVIEAIVENVDVKKKFYADLGKVAKPTAILASNTSSLAISDFAGSSGRASQVVGLHFFNPVQLMKLVEVVRTDVTDPKIFDACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLAQAISLYERGDATKEDIDISMQLGAGHPMGPITLADYVGLDTMLFILEGWVRDHPNEPAF 291
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Match: M4BEM4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEM4_HYAAE)

HSP 1 Score: 312 bits (799), Expect = 2.550e-103
Identity = 156/261 (59.77%), Postives = 196/261 (75.10%), Query Frame = 1 
Query:   94 VVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF 876
            +VGLGLMGHG+ Q  A A    + VVA+D     +D+G KRI+ SLSK+    VKKG+LT+ +A  +   + +R++  ++V ALADCDLV+EAI EN ++K   +  L  + +P  ILASNTSSL+I + A +SGR S VVGLHFFNPVQLMKLVEVVR DVTDP VF+ CK W   +GKHPVSC DTPGFIVNRLLVP LAQ + MY+RGD ++EDID SM+LGAGHPMGP+TLADYVGLD  L IL+GWV+ +P+E +F
Sbjct:    1 MVGLGLMGHGIAQTAASAG---FQVVALDADSKGLDSGMKRIEASLSKLQSRSVKKGLLTQQEADERVAAVLARVTPTTNVDALADCDLVIEAILENVDVKKEFYATLGHLAKPSAILASNTSSLAISDFAGSSGRASQVVGLHFFNPVQLMKLVEVVRTDVTDPKVFDACKQWVLDIGKHPVSCKDTPGFIVNRLLVPYLAQAIAMYERGDATMEDIDVSMQLGAGHPMGPITLADYVGLDTTLFILEGWVRDHPNELAF 258
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1749.5253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL69_ECTSI1.210e-19997.60Hydroxyacyl-Coenzyme A dehydrogenase n=2 Tax=Ectoc... [more]
A0A835YNC1_9STRA1.940e-12165.67Hydroxyacyl-coenzyme A dehydrogenase n=1 Tax=Tribo... [more]
A0A7S2SEQ6_9STRA1.020e-10658.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3G9F5_PHYRM5.980e-10558.06Uncharacterized protein n=21 Tax=Phytophthora TaxI... [more]
A0A8K1CEX9_PYTOL3.040e-10455.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662Y269_9STRA3.040e-10459.40Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
K3X1E9_GLOUD8.110e-10458.27Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6YQW8_9STRA8.380e-10457.34Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3M6VA69_9STRA1.900e-10359.02Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
M4BEM4_HYAAE2.550e-10359.77Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1749contigEcto-sp13_S_contig1749:2..3060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score563.9
Seed ortholog evalue4.3e-158
Seed eggNOG ortholog2880.D7FL69
Preferred nameHADH
Model size876
KEGG rclassRC00029,RC00099,RC00103,RC00117,RC00241,RC00525
KEGG koko:K00022
KEGG ReactionR01778,R01975,R04203,R04737,R04739,R04741,R04743,R04745,R04748,R05066,R06941,R08094
KEGG Pathwayko00062,ko00071,ko00280,ko00281,ko00310,ko00380,ko00650,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00062,map00071,map00280,map00281,map00310,map00380,map00650,map00930,map01100,map01110,map01120,map01130,map01212
KEGG ModuleM00032,M00085,M00087
Hectar predicted targeting categorymitochondrion
GOsGO:0002791,GO:0002792,GO:0003674,GO:0003824,GO:0003857,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010646,GO:0010648,GO:0010817,GO:0014823,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019395,GO:0019752,GO:0023051,GO:0023057,GO:0030258,GO:0031974,GO:0031981,GO:0032787,GO:0032868,GO:0032879,GO:0032880,GO:0034440,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043434,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046676,GO:0046883,GO:0046888,GO:0048519,GO:0048523,GO:0050708,GO:0050709,GO:0050789,GO:0050794,GO:0050796,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0071704,GO:0072329,GO:0090087,GO:0090276,GO:0090278,GO:1901575,GO:1901652,GO:1901698,GO:1901700,GO:1903530,GO:1903531,GO:1904950
Exons5
EggNOG free text desc.3-hydroxyacyl-CoA dehydrogenase activity
EggNOG OGsCOG1250@1,KOG2304@2759
Ec32 ortholog descriptionhydroxyacyl-Coenzyme A dehydrogenase
Ec32 orthologEc-19_005290.1
EC1.1.1.35
Cds size876
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462911.0083685-CDS-Ecto-sp13_S_contig1749:1..761681462911.0083685-CDS-Ecto-sp13_S_contig1749:1..76Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1749 2..76 -
1681462911.0220819-CDS-Ecto-sp13_S_contig1749:358..4821681462911.0220819-CDS-Ecto-sp13_S_contig1749:358..482Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1749 359..482 -
1681462911.0311587-CDS-Ecto-sp13_S_contig1749:750..9501681462911.0311587-CDS-Ecto-sp13_S_contig1749:750..950Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1749 751..950 -
1681462911.0439758-CDS-Ecto-sp13_S_contig1749:1377..17671681462911.0439758-CDS-Ecto-sp13_S_contig1749:1377..1767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1749 1378..1767 -
1681462911.0535803-CDS-Ecto-sp13_S_contig1749:2973..30601681462911.0535803-CDS-Ecto-sp13_S_contig1749:2973..3060Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1749 2974..3060 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1749.5253.1prot_Ecto-sp13_S_contig1749.5253.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1749 2..3060 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1749.5253.1

>prot_Ecto-sp13_S_contig1749.5253.1 ID=prot_Ecto-sp13_S_contig1749.5253.1|Name=mRNA_Ecto-sp13_S_contig1749.5253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=292bp
MMLASSTRLLSGGASRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMAS
SPEYTVVAVDGSKDSMDAGKKRIDKSLSKMLDGKVKKGVLTEGDAAAQKE
GISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILA
SNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPAVFE
ECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDID
KSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPHEPSF
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mRNA from alignment at Ecto-sp13_S_contig1749:2..3060-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1749.5253.1 ID=mRNA_Ecto-sp13_S_contig1749.5253.1|Name=mRNA_Ecto-sp13_S_contig1749.5253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3059bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1749:2..3060- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCTAGCGTCGTCTACCCGACTGCTCAGCGGTGGGGCTAGCAGGCG
GTGGCAACTCGCGCGGGAACTCTCGACGATCAAGCAGGTAATGGGCGTGC
GTGTTGGCCGTTCGTGTGTCTCCCGAGGAGAACGTATGCCACACTCGTCG
CCCTGTCTTCGTGCAAATTTCTCTCTGGCTGCCGTGTGTGCTGCAACGCA
ACGTTCCGTGTGGAAGACGTAAGGACCTTTCTTTCGGAATGCGGTTGCGT
CCGGCTGGCACTGTGCTTATACCCTACACGGGATAGGTGCCTAAGGCAGG
GGTTGTCGGTGGTTGCTGCTGTAGCAAACTTTTGTCGCTCACAGCAGTAG
GTAGGTGCTGGACGCCTGGCTGTCTGTTCGCTCGGGTTGAAGTGCAAGTC
GTGCACAATCGATTGTTCCGCTATCCTGGCATTGTGCCGAGAACCAATGG
GGGGTTGGCTTGTCTTGCCGAGACTACCCCATCCACGAACGGATCACACG
TCATGTTTGGACGGGTGGGGAGCCACGACAAATTGTTTGACCCTCGCCGG
TCGGATTCGGGTTGATGTGGCGTACTGGAGCGGCGGCGGTGCCAGGAGAA
AGCGGTGTGCTTCTTTTTCTGGCCTACATTGGCGGGGCTGCGCATGAGGC
AGCCCCGCTCATCCCCCGGTGCTCGCTGTTGTTCCTTTGACTTGTGCTCA
AGTTACCCTATTGGTTCAACGTGTTGTCTATTTGGCTTGTACTCCGTGTA
CTTCGATGGGCAAAATGAAGTGCAAAAATCGTAGAAAAAAATCCAATAAG
TCGTATGGATGTGTATCTAGGCACCCGCCTCTACATGTAGACTCTGCGCA
AAAGCACAACATTTGCTCCGAGGTGGAAAAGAGTGCCAGACTATGCGTAA
GTCTTTGAAGGAAGAAGCTCGAGATTCTCCGTGGATTGGCTGACCAGCAG
CAATTCCCAGAGGTGCATGTATAGGTTCTCGATGACAACATCGAGAGGTC
TAGCGCTCCAGTTCGAGTGCAAATACAGTTCTTGAAAAACATTGTTGGTC
GAGGTGAACGAGTTGAACACCGCCGCAGGCAAGCACAGCCCCACCAACCT
GCCCCACGCGTTGTTCCCTTGACACTCACAACCGTTCCGGTCTCCGCTCA
GTACCTTTTACGCCTTTCTGGTCCAACCGACGCGGACGCCTTCCGTGGTC
ACAAGCCATTTACCCATTTTTTGTTATTGCACCACAACCCAATAGACACT
CAAAAAATTCCGAAATCCTCGGCTCCTCCTCTTGCCTTGGCAGGTCGGCG
TTGTCGGGCTTGGGCTTATGGGCCACGGTGTTGTCCAGGTGACCGCGATG
GCCTCGTCCCCAGAGTACACGGTCGTCGCCGTCGACGGGAGCAAGGACTC
CATGGACGCTGGGAAGAAGCGGATCGACAAGTCGCTCTCGAAGATGCTGG
ACGGGAAGGTGAAGAAGGGCGTTCTTACGGAGGGCGACGCCGCCGCTCAG
AAGGAGGGGATCTCGTCGCGGATATCGTACGCGTCTGACGTGTCGGCCCT
TGCGGATTGCGACTTGGTCGTGGAGGCAATCACGGAGAACCCGGAGATCA
AGTTCTCCCTCTTCAAGGACCTCGCCCGAGTAACTCGTCCGGACTGCATC
CTGGCCTCCAACACGTCTTCGTTGAGCATCAAGGTGACTCCCTCTCGAAT
ATGTCTTGAGTGTCAAGGTGGGGGTGTGACGAACACTTACGAGTTGCGCC
GCATGTGCAACCCACGGCTGACTTCTTTAGAAGCCAAAAATAAAACCGCT
ACAAGTAGACTACAAGTAGTCAGCGCGGGGCCGACTAGTCTTAATGGTTT
GATTTCAGCTTCTTTCGGTATCTCTATCGCGTGGATCGCTTCCGCGTATG
TGCTCGCTCACCCGCTCCCCTCCGAAGACATATACCGGCTGTTGCTCCTG
ATTCAGGAAACGACCGTGAATATGTGCTCTCACCCGCTCCCCCTCCCGCA
ACGACATGCCGCTGGATGCTCCTCATTCCACGGTAAATGGCCGTGAAAAT
GAGCTCTTATCCGCTTCCCTCCCATAACACATGCATGCCGATTTCTACTC
CTCCTTCCAGGAAATGGCCGTAGCTTCGGGGCGCCCGTCACACGTCGTTG
GCCTTCACTTCTTTAACCCTGTGCAATTGATGAAGCTGGTAGAGGTGGTC
CGTTGCGATGTGACTGACCCGGCCGTCTTCGAGGAGTGCAAGTCTTGGGC
ACAGACCGTCGGCAAGCACCCAGTGTCGTGCGTGGACACGCCTGGCTTTA
TCGTCAACAGGTGGGGATGGGGTAGCTGGTGGTCACGCGAACCCCAGTCA
GGCTTTGTCGTTGGCAGGTGGGATGGGGTAGCTATCACACATGCACCAAC
AAGAATTTATCGACAGGTGGGATAAAAAAACATCAAACAAGCCCTCAGCA
ATGCAACCGATGGCCAGCAGTATCAAAGGATGGCGATTGCCCAACCGTAC
CTTTTGACTCAAATCTATTTTTCCTATATGCATGTCTCTTGCAAACCTTT
TCGCATCGCGCGTGGAACACCCACATAGGCTGCTCGTGCCCGGCCTTGCG
CAAGGAATGCTGATGTACGACCGGGGCGACGGATCAGTGGAGGACATCGA
CAAGTCCATGGAACTTGGGGCTGGACATCCCATGGGACCACTCACGTTGG
CGGTGCGTTTGCTGTTTCTTGGTCGTTTTTGGCGCTCGCTGGAAACATTA
GCACGGCAAATGCGTATGCTTGCGCACAGTTTTTAGACCTCGTGGTTCCA
GCACTGCCAGTCGATGCAAGCACCCGTGTTCTTCTGTGGTACCAAAACAC
GTGTTTTGCGTTGCTCTTTTTTGCTACCTTCTGTGTGACCACGGTTCTGT
AAGGGCTGATTTGACGTCATGAACACAACGATAAAACACTTCTGAAGCCA
TCACTGCCCCTGTTGATCCTATGCATCGGCACAGGACTACGTGGGCCTCG
ACATCTGCCTGTCGATCTTGGATGGATGGGTGCAAAAATACCCGCATGAG
CCTTCCTTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1749:2..3060-

>mRNA_Ecto-sp13_S_contig1749.5253.1 ID=mRNA_Ecto-sp13_S_contig1749.5253.1|Name=mRNA_Ecto-sp13_S_contig1749.5253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1749:2..3060- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCTAGCGTCGTCTACCCGACTGCTCAGCGGTGGGGCTAGCAGGCG
GTGGCAACTCGCGCGGGAACTCTCGACGATCAAGCAGGTCGGCGTTGTCG
GGCTTGGGCTTATGGGCCACGGTGTTGTCCAGGTGACCGCGATGGCCTCG
TCCCCAGAGTACACGGTCGTCGCCGTCGACGGGAGCAAGGACTCCATGGA
CGCTGGGAAGAAGCGGATCGACAAGTCGCTCTCGAAGATGCTGGACGGGA
AGGTGAAGAAGGGCGTTCTTACGGAGGGCGACGCCGCCGCTCAGAAGGAG
GGGATCTCGTCGCGGATATCGTACGCGTCTGACGTGTCGGCCCTTGCGGA
TTGCGACTTGGTCGTGGAGGCAATCACGGAGAACCCGGAGATCAAGTTCT
CCCTCTTCAAGGACCTCGCCCGAGTAACTCGTCCGGACTGCATCCTGGCC
TCCAACACGTCTTCGTTGAGCATCAAGGAAATGGCCGTAGCTTCGGGGCG
CCCGTCACACGTCGTTGGCCTTCACTTCTTTAACCCTGTGCAATTGATGA
AGCTGGTAGAGGTGGTCCGTTGCGATGTGACTGACCCGGCCGTCTTCGAG
GAGTGCAAGTCTTGGGCACAGACCGTCGGCAAGCACCCAGTGTCGTGCGT
GGACACGCCTGGCTTTATCGTCAACAGGCTGCTCGTGCCCGGCCTTGCGC
AAGGAATGCTGATGTACGACCGGGGCGACGGATCAGTGGAGGACATCGAC
AAGTCCATGGAACTTGGGGCTGGACATCCCATGGGACCACTCACGTTGGC
GGACTACGTGGGCCTCGACATCTGCCTGTCGATCTTGGATGGATGGGTGC
AAAAATACCCGCATGAGCCTTCCTTC
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