mRNA_Ecto-sp13_S_contig17475.5245.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17475.5245.1
Unique NamemRNA_Ecto-sp13_S_contig17475.5245.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5KRQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ2_9PHAE)

HSP 1 Score: 569 bits (1467), Expect = 4.950e-200
Identity = 343/400 (85.75%), Postives = 354/400 (88.50%), Query Frame = 1
Query:    1 MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKAKGNDN 1194
            MGMWAINQG ARCGPGAKATSF+EAVAADNIALGSRSGA  GGRASGRVSPASSIGGARPASE   XXXXXXXXXXXXXXXXLDDD SPAGSGPSRKVPPLG+LVKHMGSL+IP LA+SAGVTTE+ADYFLNTGFTADE  PERAV+ MTVLLDKR SLQRDGDSVQD MDDLG+EDMQLPG DRFDESVMFKLLE YGV+MMDFRSLPESNWFHSGWPIERVTPDKVLQVTK VARLLVLGAGVTNSGLSAAGQTSIPG ATVGGARA SGM+P GAASGP GNRGRKPRAKTN LA+DGLDSFMERQ ADARALADQK   XXXXXX    REVGRRQELLDMMAHERAMREDERK                 KADRDHQIRMMQLQVDLAKAKGN+N
Sbjct:   88 MGMWAINQGKARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGRVSPASSIGGARPASEASAXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTADEVQPERAVAKMTVLLDKRRSLQRDGDSVQDSMDDLGEEDMQLPGFDRFDESVMFKLLEPYGVEMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGPATVGGARAMSGMDPLGAASGPSGNRGRKPRAKTNYLAKDGLDSFMERQAADARALADQKREEXXXXXXTEAKREVGRRQELLDMMAHERAMREDERKXXXXXXXXXXXXXXXXXKADRDHQIRMMQLQVDLAKAKGNNN 487          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5JQZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ1_9PHAE)

HSP 1 Score: 565 bits (1457), Expect = 8.670e-199
Identity = 347/400 (86.75%), Postives = 357/400 (89.25%), Query Frame = 1
Query:    7 MWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVKHMG-------SLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKA 1179
            MWAIN+GNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRV+PASSIGG RPASE  XXXXXXXXXXXXXXXXX DDD SPAGSGPSRKVPPLG+LV           SLSIPT A+SAGVTTE ADYFLNTGFTADE  PERAV+MM VLLDKRLS QRDGDSVQDYMDDLG+EDMQLPG DRFDESVMFKLLELYGV+MMDFRSLPESNWFHSGWPIERVTPDKVLQVTK VARLLVLGAGVTNSGLSAAGQTSIPGSAT G ARA SGM+PSG ASGP GNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQK   XXXXXXX   REVGRRQELLDMMAHERAMREDERKHD QERE+ERA A   QK DRDHQIRMMQLQV  A+A
Sbjct:    1 MWAINKGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVNPASSIGGLRPASEVSXXXXXXXXXXXXXXXXXXDDDFSPAGSGPSRKVPPLGDLVXXXXXXXXXXXSLSIPTPAQSAGVTTEDADYFLNTGFTADEVQPERAVAMMAVLLDKRLSPQRDGDSVQDYMDDLGEEDMQLPGFDRFDESVMFKLLELYGVEMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGSATEGCARAMSGMDPSGVASGPSGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKREEXXXXXXXEAKREVGRRQELLDMMAHERAMREDERKHDRQEREMERATAXXXQKEDRDHQIRMMQLQVADARA 400          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5L4P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P2_9PHAE)

HSP 1 Score: 524 bits (1349), Expect = 1.270e-182
Identity = 323/416 (77.64%), Postives = 336/416 (80.77%), Query Frame = 1
Query:    1 MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLD----------------SFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKAKGNDN 1194
            MGMWAINQGNARCGP AK TSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDD SPAGSGPSRKVPPLG+LVKHMGSL+IP LA+SAGVTTE+ADYFLNTGFT DE  PERAV+MM VLLD RL +QRDGDSVQ YMD LG+ED +LPG D FDESVMFKLLELYGV+ MDF SLP++NWFH GWPI+RVTPDKVLQVTK VA LLVLGAGVTNS LSAAGQTS PGSA VGGA A S        SGP GNRGRKPRAKTNKLAEDGLD                SFMERQVADARALADQK             REVGRRQELLDMMAHERAMREDERK                 KADRDHQIRMMQLQVDLAKAKGN+N
Sbjct:   38 MGMWAINQGNARCGPSAKVTSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGEEDCELPGFDGFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGGAHAMSXXXXXXXXSGPSGNRGRKPRAKTNKLAEDGLDREVLTYPGASLAPTCPSFMERQVADARALADQKRGEDERRRAAEAKREVGRRQELLDMMAHERAMREDERKXXXXXXXXXXXXXXXXXKADRDHQIRMMQLQVDLAKAKGNNN 453          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5K579_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K579_9PHAE)

HSP 1 Score: 517 bits (1331), Expect = 6.260e-176
Identity = 343/471 (72.82%), Postives = 356/471 (75.58%), Query Frame = 1
Query:    1 MGMWAINQGNARCGPGAKATSFEEAV----------------------AADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAG-------------------------------------------------VTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKAKGNDN 1194
            MGMWAINQGNARCGPGAKATSF+EA                       AADN ALG RSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDD SPAGSGPSRKVPPLG+LVKHMGSL+IP LA+SAG                                                 VTTE+ADYFLNTGFT DE  PERAV+MM VLLD RL +QRDGDSVQ                 +FDESVMFKLLELYG++ MDFRSLPESN FHSGWPIERVTPDKVLQVTK VARLLVLGAGVTNSGLSAAGQTSIPGSATVG ARA SGM+PSGAASGP GNRGRKPRAKTNKLAEDGLDSF+ERQVADARALADQK   XXXXXXX   REVGRRQELLDMMAHERAMREDERKHD QEREVERAAA AEQK DRD QIRMMQLQVDLAKAKGN+N
Sbjct:  276 MGMWAINQGNARCGPGAKATSFQEAXXXXXXXXXXXXXXXXXXXXXXXAADNNALGYRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGADYFLDTGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQ-----------------QFDESVMFKLLELYGMETMDFRSLPESNRFHSGWPIERVTPDKVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGSATVGDARAMSGMDPSGAASGPSGNRGRKPRAKTNKLAEDGLDSFIERQVADARALADQKREEXXXXXXXEAKREVGRRQELLDMMAHERAMREDERKHDRQEREVERAAAWAEQKGDRDRQIRMMQLQVDLAKAKGNNN 729          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5KXD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD3_9PHAE)

HSP 1 Score: 503 bits (1296), Expect = 3.520e-172
Identity = 318/400 (79.50%), Postives = 334/400 (83.50%), Query Frame = 1
Query:    1 MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKAKGNDN 1194
            MGMWAINQGNARCGPGAKATSF+EAVAADNIALGSRSGA  GGRASG VSPASSIGGARPASE   XXXXXXXXXXXXXXX LDDD SPAGSGPSRKVPPLG+LVKHMGSL+IP LA+SAGVTTE+ADYFLNTGFT DE  PERAV+MM VLLD RL +QRDGDSVQ YMD LG+ED +LPG D FDESVMFKLLELYGV+ MDF SLP++NWFH GWPI+RVTPDKVLQVTK VA LLVLGAGVTNS LSAAGQTS PGSA VGGA A S        SGP GNRGRKPRAKT KLAEDGLDSFMERQVADAR+L    XXXXXXXXXXXXX EVGRRQELLDMMAHE AMRE ERKHD QE                 HQIR+MQ QVDLAKAKGN+N
Sbjct:  218 MGMWAINQGNARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGWVSPASSIGGARPASEASAXXXXXXXXXXXXXXXGLDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGEEDCELPGFDGFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGGAHAMSXXXXXXXXSGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARSLXXXXXXXXXXXXXXXXXXEVGRRQELLDMMAHESAMREAERKHDRQEXXXXXXXXXXXXXXXXXHQIRIMQFQVDLAKAKGNNN 617          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: D7FZ43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ43_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 9.180e-170
Identity = 308/401 (76.81%), Postives = 329/401 (82.04%), Query Frame = 1
Query:    1 MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGK-EDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKAKGNDN 1194
            MG WAINQGNARCGPGAKATS +EAVAADNIA GSRSGAAAGGRASGRVSP SSIGGARPASEXXXXXXXXXXXXXXXXXXX+DDD SPAGSG SRKVPPLG LV HMGSLSIPTLA+SAGVTTE+ADYFL  GFTADE   ER V+MMTVLLDKR +LQRDG SV+DY+D+LG  ED QLPGVD  +ESVMF LL+LYGV    FRSLP+SNWFH G P+ERVTP KV QVTK VARLLVLGAGVTNSGLSAAGQTSI GS    GARA SGM+PS AAS   GNRGRK RAKTNKLAE+GLDSFMERQVA A+ LADQK             RE+GRRQEL+DMMAHERAMREDERK               +QKADRDHQI+MMQLQVDLAKAKGN+N
Sbjct:    1 MGTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERVTPGKV-QVTKRVARLLVLGAGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAAENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 400          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5KX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX39_9PHAE)

HSP 1 Score: 482 bits (1241), Expect = 1.850e-167
Identity = 280/304 (92.11%), Postives = 290/304 (95.39%), Query Frame = 1
Query:    1 MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIE-RVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLD 903
            MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIG ARPASEXXXXXXXXXXXXXXXX   LDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLA+SAG+TTE+AD+FLNTGFTADE  PERAV+ MTVLLDKRLSLQRDGDSVQDYMDDLG+EDMQLPG DRFDESVMFKLLELYGV+MMDFRSLPESNWFHSGWPIE RVTPDK+LQ+TK VARLLVLGAGVTNSGLSAA QTSIPGSATVGGARA SGM+PSG ASGP GNRGRKPRAKTNKLAEDGLD
Sbjct:   68 MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGWARPASEXXXXXXXXXXXXXXXXTGGLDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAQSAGITTEEADFFLNTGFTADEVQPERAVATMTVLLDKRLSLQRDGDSVQDYMDDLGEEDMQLPGFDRFDESVMFKLLELYGVEMMDFRSLPESNWFHSGWPIEQRVTPDKLLQITKRVARLLVLGAGVTNSGLSAADQTSIPGSATVGGARAMSGMDPSGTASGPSGNRGRKPRAKTNKLAEDGLD 371          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5JZP1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP1_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 5.940e-141
Identity = 221/238 (92.86%), Postives = 227/238 (95.38%), Query Frame = 1
Query:  247 LDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQK 954
            LDDDLSPAGSGPSRKVPPLGELV HMGSLSIPTLA+SAGVTTE ADYFLNTGFTADE  PERAV+MMTVLLDKRLSLQRDGDSVQD MDDLG+EDMQLPG DRFDESVMFKLLELYGV+MMDFRSLPESNWFHSGWPIERVTPDKVLQ+TK VARLLVLGAGVTNSGLSAA QTSIPGSATVGGARA SGM+PSGAASGP GNRGRKPRAKTNK AEDGLDSFMERQVADARALADQK
Sbjct:    6 LDDDLSPAGSGPSRKVPPLGELVIHMGSLSIPTLAQSAGVTTEDADYFLNTGFTADEVQPERAVAMMTVLLDKRLSLQRDGDSVQDCMDDLGEEDMQLPGFDRFDESVMFKLLELYGVEMMDFRSLPESNWFHSGWPIERVTPDKVLQITKRVARLLVLGAGVTNSGLSAADQTSIPGSATVGGARAMSGMDPSGAASGPSGNRGRKPRAKTNKFAEDGLDSFMERQVADARALADQK 243          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5K5U8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U8_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 1.270e-139
Identity = 244/284 (85.92%), Postives = 258/284 (90.85%), Query Frame = 1
Query:  247 LDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREV 1092
            LDDDLSPAGSGPSRKVPPLG+LVKHMGSL+IP LA+SAGVTTE+ADYFLNTGFT DE  PERAV+MMTVLLDKRLS QRDGD+VQDYMDDLG+EDMQLPG DRFDESVMFKLLELYGV+ MDF SLP++NWFH GWPI+RVTPDKVLQVTK VA LLVLGAGVTNS LSAAGQTS PGSA V   RA SGM+PSGAASGP GNRGRKPRAKTNKLAEDGLDSFMERQVADAR+L    XXXXXXXXXXXXX EVGRRQELLDMMAH+R MREDERKHD QEREV
Sbjct:  329 LDDDLSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMTVLLDKRLSHQRDGDNVQDYMDDLGEEDMQLPGFDRFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARV--XRAMSGMDPSGAASGPSGNRGRKPRAKTNKLAEDGLDSFMERQVADARSLXXXXXXXXXXXXXXXXXXEVGRRQELLDMMAHKRPMREDERKHDRQEREV 610          
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Match: A0A6H5KDK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK9_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.450e-135
Identity = 228/318 (71.70%), Postives = 243/318 (76.42%), Query Frame = 1
Query:  247 LDDDLSPAGSGPSRKVPPLGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADE--PERAVSMMTVLLDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKMMDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSAAGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGLDSFMERQVADARALADQKXXXXXXXXXXXXXREVGRRQELLDMMAHERAMREDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKAKGNDN 1194
            LDDD SPAGSGPSRKVPPLG+LVKHMGSL+IP LA+SAGVTTE+ADYFLNTGFT DE  PERAV+MM VLLD RL +QRDGDSVQ YMD LG+ED +LPG D FDESVMFKLLEL GV+ MDF SLP++NWFH GWPI+RVTPDKVLQVTK VA LLVLGAGVTNS LSAAGQTS PGSA VGGA A S        SGP GNRGRKPRAKT KLAEDGLDSFMERQVADAR+LADQ+             REVGRRQELLDMMAHERAMREDERKHD QE                           DLAKAKGN+N
Sbjct:    6 LDDDFSPAGSGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGEEDCELPGFDGFDESVMFKLLELSGVEKMDFHSLPDANWFHGGWPIDRVTPDKVLQVTKRVASLLVLGAGVTNSWLSAAGQTSRPGSARVGGAHAMSXXXXXXXXSGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARSLADQRREEDERRWAAEAKREVGRRQELLDMMAHERAMREDERKHDRQEXXXXXXXXXXXXXXXXXXXXXXXXXXXDLAKAKGNNN 323          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17475.5245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRQ2_9PHAE4.950e-20085.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQZ1_9PHAE8.670e-19986.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4P2_9PHAE1.270e-18277.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K579_9PHAE6.260e-17672.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXD3_9PHAE3.520e-17279.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ43_ECTSI9.180e-17076.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX39_9PHAE1.850e-16792.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZP1_9PHAE5.940e-14192.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K5U8_9PHAE1.270e-13985.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDK9_9PHAE1.450e-13571.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17475contigEcto-sp13_S_contig17475:75..1480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1197
Hectar predicted targeting categoryother localisation
Exons2
Cds size1197
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462910.4117894-CDS-Ecto-sp13_S_contig17475:74..3661681462910.4117894-CDS-Ecto-sp13_S_contig17475:74..366Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17475 75..366 -
1681462910.422527-CDS-Ecto-sp13_S_contig17475:575..14801681462910.422527-CDS-Ecto-sp13_S_contig17475:575..1480Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17475 576..1480 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17475.5245.1prot_Ecto-sp13_S_contig17475.5245.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17475 75..1480 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17475.5245.1

>prot_Ecto-sp13_S_contig17475.5245.1 ID=prot_Ecto-sp13_S_contig17475.5245.1|Name=mRNA_Ecto-sp13_S_contig17475.5245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=399bp
MGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVS
PASSIGGARPASEASAGGAASGRSSPTMSTGGLDDDLSPAGSGPSRKVPP
LGELVKHMGSLSIPTLAKSAGVTTEKADYFLNTGFTADEPERAVSMMTVL
LDKRLSLQRDGDSVQDYMDDLGKEDMQLPGVDRFDESVMFKLLELYGVKM
MDFRSLPESNWFHSGWPIERVTPDKVLQVTKGVARLLVLGAGVTNSGLSA
AGQTSIPGSATVGGARATSGMNPSGAASGPWGNRGRKPRAKTNKLAEDGL
DSFMERQVADARALADQKRQEDERRRAAEAKREVGRRQELLDMMAHERAM
REDERKHDIQEREVERAAARAEQKADRDHQIRMMQLQVDLAKAKGNDN*
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mRNA from alignment at Ecto-sp13_S_contig17475:75..1480-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17475.5245.1 ID=mRNA_Ecto-sp13_S_contig17475.5245.1|Name=mRNA_Ecto-sp13_S_contig17475.5245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1406bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17475:75..1480- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGATGTGGGCCATCAACCAGGGCAACGCCCGATGCGGACCGGGCGC GAAGGCTACATCATTCGAAGAAGCTGTTGCCGCCGACAACATCGCGTTGG GTTCCCGCTCAGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGT CCGGCCAGCAGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGG TGGCGCTGCCAGCGGTCGATCGAGCCCGACCATGAGTACGGGCGGGCTAG ACGACGACCTATCGCCCGCGGGGAGCGGGCCATCGAGAAAGGTTCCACCG CTTGGCGAATTGGTGAAGCACATGGGGTCGCTGAGCATTCCGACGCTTGC GAAAAGTGCCGGGGTCACCACGGAGAAGGCGGACTACTTCCTCAACACGG GCTTCACGGCCGACGAACCGGAAAGGGCCGTGAGCATGATGACGGTACTA CTCGACAAAAGGCTTAGTCTCCAGCGCGACGGAGACAGCGTCCAGGACTA CATGGATGATCTTGGTAAAGAGGATATGCAGCTGCCCGGGGTTGATAGGT TCGACGAGTCGGTCATGTTTAAACTGCTCGAGCTCTACGGCGTGAAAATG ATGGACTTCCGCAGCCTGCCGGAATCGAATTGGTTTCACAGCGGATGGCC CATAGAACGTGTTACGCCGGACAAGGTGCTTCAGGTTACGAAGGGGGTGG CGAGGTTGTTGGTGCTCGGCGCCGGCGTGACGAACTCCGGACTGTCCGCC GCCGGTCAGACATCCATCCCCGGTTCTGCAACAGTGGGGGGTGCGCGCGC CACGTCAGGCATGAACCCTTCAGGGGCGGCGAGTGGGCCTTGGGGAAACC GTGGAAGGAAGCCCCGTGCCAAGACCAATAAGCTCGCCGAGGATGGGCTA GATAGGTAAGGCTGTTCGTCGACTCTGCCCATGTCTTGGTTCTGGCAACT CCTTCGTGTGGTCGATGCTGTGCATTGTTGTTAGATTGTTTTGGTGGACG TAACCTGAACCAGAGAATGTCATTGCAGCATTATTGTTGGCTACTCCATC AGGGAGGTCCCGGAGCTTACCCTACCCTGGTGCCTCTCTTGCGCCGTTGT GCCACGTGTCCCAGCTTCATGGAGCGACAGGTGGCTGACGCTCGGGCACT CGCCGATCAGAAACGTCAAGAGGACGAGAGGAGGCGGGCGGCGGAAGCTA AACGAGAAGTAGGGAGGAGGCAAGAGCTCCTGGACATGATGGCCCACGAG AGGGCAATGCGGGAAGATGAAAGGAAACACGACATACAAGAGCGTGAAGT GGAGAGGGCGGCTGCACGGGCAGAGCAAAAGGCAGATCGTGATCACCAAA TCAGGATGATGCAACTCCAGGTAGACCTGGCGAAGGCGAAGGGCAACGAT AATTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17475:75..1480-

>mRNA_Ecto-sp13_S_contig17475.5245.1 ID=mRNA_Ecto-sp13_S_contig17475.5245.1|Name=mRNA_Ecto-sp13_S_contig17475.5245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1197bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17475:75..1480- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGATGTGGGCCATCAACCAGGGCAACGCCCGATGCGGACCGGGCGC
GAAGGCTACATCATTCGAAGAAGCTGTTGCCGCCGACAACATCGCGTTGG
GTTCCCGCTCAGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGT
CCGGCCAGCAGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGG
TGGCGCTGCCAGCGGTCGATCGAGCCCGACCATGAGTACGGGCGGGCTAG
ACGACGACCTATCGCCCGCGGGGAGCGGGCCATCGAGAAAGGTTCCACCG
CTTGGCGAATTGGTGAAGCACATGGGGTCGCTGAGCATTCCGACGCTTGC
GAAAAGTGCCGGGGTCACCACGGAGAAGGCGGACTACTTCCTCAACACGG
GCTTCACGGCCGACGAACCGGAAAGGGCCGTGAGCATGATGACGGTACTA
CTCGACAAAAGGCTTAGTCTCCAGCGCGACGGAGACAGCGTCCAGGACTA
CATGGATGATCTTGGTAAAGAGGATATGCAGCTGCCCGGGGTTGATAGGT
TCGACGAGTCGGTCATGTTTAAACTGCTCGAGCTCTACGGCGTGAAAATG
ATGGACTTCCGCAGCCTGCCGGAATCGAATTGGTTTCACAGCGGATGGCC
CATAGAACGTGTTACGCCGGACAAGGTGCTTCAGGTTACGAAGGGGGTGG
CGAGGTTGTTGGTGCTCGGCGCCGGCGTGACGAACTCCGGACTGTCCGCC
GCCGGTCAGACATCCATCCCCGGTTCTGCAACAGTGGGGGGTGCGCGCGC
CACGTCAGGCATGAACCCTTCAGGGGCGGCGAGTGGGCCTTGGGGAAACC
GTGGAAGGAAGCCCCGTGCCAAGACCAATAAGCTCGCCGAGGATGGGCTA
GATAGCTTCATGGAGCGACAGGTGGCTGACGCTCGGGCACTCGCCGATCA
GAAACGTCAAGAGGACGAGAGGAGGCGGGCGGCGGAAGCTAAACGAGAAG
TAGGGAGGAGGCAAGAGCTCCTGGACATGATGGCCCACGAGAGGGCAATG
CGGGAAGATGAAAGGAAACACGACATACAAGAGCGTGAAGTGGAGAGGGC
GGCTGCACGGGCAGAGCAAAAGGCAGATCGTGATCACCAAATCAGGATGA
TGCAACTCCAGGTAGACCTGGCGAAGGCGAAGGGCAACGATAATTAG
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