mRNA_Ecto-sp13_S_contig17473.5241.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17473.5241.1
Unique NamemRNA_Ecto-sp13_S_contig17473.5241.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: D7FPZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ1_ECTSI)

HSP 1 Score: 620 bits (1598), Expect = 4.980e-218
Identity = 380/433 (87.76%), Postives = 384/433 (88.68%), Query Frame = 1
Query:    1 MDGAVSLEFMTGNPQLGVLSGRLTYLESSINESNDGSSSRNXXXXXXXXXXXXXXXXXXISWQGSSSSTVADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLSDVQ 1293
            MDGAVSLEFMTGNPQLGVLSGRLTYLESS NES DGSS      XXXXXXXXXXXXXXX    GS+SSTVA+TT SPSFNAD LLDHLP+RRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFD PADSS               XXXXXXXXXX             Q RTAR FSPI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQA DNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDP+QTSEERPQMPARLSDVQ
Sbjct:    1 MDGAVSLEFMTGNPQLGVLSGRLTYLESSRNESGDGSSXX----XXXXXXXXXXXXXXXXXXXGSNSSTVANTTYSPSFNADVLLDHLPQRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDLPADSSPPHTPPAGSAVGATAXXXXXXXXXXGSGGISSSAGTPPQLRTARHFSPIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQAADNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 429          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A6H5K0J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J5_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 1.020e-123
Identity = 256/280 (91.43%), Postives = 259/280 (92.50%), Query Frame = 1
Query:  454 ESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLSDVQ 1293
            ++ SSADDFFLQCNGKRFNSFEETTCRVVFVAKATFD PADSS       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICME MESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDP+QTSEERPQMPARLSDVQ
Sbjct:    5 KTASSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDLPADSSPPHTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMEHMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 284          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A835YPP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP8_9STRA)

HSP 1 Score: 275 bits (704), Expect = 3.530e-82
Identity = 158/374 (42.25%), Postives = 199/374 (53.21%), Query Frame = 1
Query:  187 QGSSSSTVADTTCSP-SFNADALLD---HLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHED-HIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLSDVQ 1293
            Q + ++ V +T   P S  + A L     LP  RG LLC+ S+PAHMVPTDML   APF++ +  +RILRPC     SD  +   EYMV+LQM +Q  AD F+ Q NG+ F+S EE  C VVFVA  +F    D S                                          A    P                                    + G E     CVIC E++E   LTT C H+FH+EC+  WQDSPCPVCRFHHN + + STCQEC  + N+ VCLICG V CG R +  H+  H+ +TLHAYA+++ETQQVWDFAG GFVHRLI+NKADGK+VE ++P   S ERPQ P++LSDVQ
Sbjct:  185 QDAGAALVTETALQPASMRSQAALSATCQLPEGRGCLLCITSMPAHMVPTDMLQLFAPFRQSMSYVRILRPCRG---SDSERL--EYMVVLQMLNQELADSFYRQYNGQPFSSMEEACCEVVFVASISFIDAQDGSCDSISALGALPNACATA------------------------AAAAAGPADTSQ----------------------------ALHSGGAEAREDACVICFEKLEGGTLTTACKHTFHIECIALWQDSPCPVCRFHHNGSGDDSTCQECGRSVNVHVCLICGYVGCGGREQGGHMSQHHLATLHAYALDVETQQVWDFAGGGFVHRLIYNKADGKMVEANNPGHASGERPQAPSQLSDVQ 501          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A6H5K685_9PHAE (BRAP2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K685_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.040e-71
Identity = 130/158 (82.28%), Postives = 136/158 (86.08%), Query Frame = 1
Query:    1 MDGAVSLEFMTGNPQLGVLSGRLTYLESSINESNDGSSSRNXXXXXXXXXXXXXXXXXXISWQGSSSSTVADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSAD 474
            MDGAVSLEFMTGNPQLGVLSGRLTYLE+S NES+DGS SR          XXXXXXXX     GS+SSTVADTT SP+FNAD LLDHLP+RRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQ   +
Sbjct:    1 MDGAVSLEFMTGNPQLGVLSGRLTYLETSSNESSDGSLSRKEEKGHARTSXXXXXXXX-----GSNSSTVADTTYSPNFNADVLLDHLPQRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQEGVE 153          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: W2PVR5_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PVR5_PHYPN)

HSP 1 Score: 224 bits (570), Expect = 1.420e-65
Identity = 126/344 (36.63%), Postives = 170/344 (49.42%), Query Frame = 1
Query:  262 LPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
            LP  R  L+C+++VP+HM P ++L F A F+E +  +RIL+        DP ++    MVL+Q  SQ  AD FF   NGK FNS E+  C++VFV    FDP  D                                         PR+ RR S                                      AG   +  TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   ++LW+CLICG V CG    +H + HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P   S ER Q P   S
Sbjct:   70 LPNERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFQVHNGKYFNSIEQERCKIVFVRSIEFDPVIDEDDPDCDALEEKHTDGEDTAAPMPS---------------SPRSERRAS--------------------------NAQIRKLFPPPPAGMT-EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSGERSQTPPTTS 359          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: M4B1G8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1G8_HYAAE)

HSP 1 Score: 225 bits (573), Expect = 8.440e-65
Identity = 142/433 (32.79%), Postives = 204/433 (47.11%), Query Frame = 1
Query:   16 SLEFMTGNPQLGVLSGRL-------TYLESSINESNDGSSSRNXXXXXXXXXXXXXXXXXXISWQGSSSSTVADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
            S  F+TGNPQ+ V++G+L       TY   +++ SN  +SS                     S+ G+S+++ A            L   LPR R  L+C+++VP+HM P ++L F + F+E +  +RIL+        D  +     MVL+Q ++Q  AD FFL+  GK FNS E+  C++VFV    FD  A                                         + RT+R                                         AG   +  TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   ++LW+CLICG V CG    +H + HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P   S ER Q P   S
Sbjct:   25 SASFLTGNPQVRVITGKLRFYRADETYTTPTLSISNHTNSSS--------------------SFSGTSTTSSA-----------LLTQQLPRERSALVCVVTVPSHMSPVEILEFLSSFRENIALVRILK--------DSERN--NCMVLVQFQTQDRADQFFLEHTGKYFNSIEQERCKIVFVRSIEFDLVAGEDQLTCDALEEKDAGGDKIVASGLMSSQS-----------ESRTSRM------------------------------QMRKLFPLPPAGMT-EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKEHYQDTLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSSERSQHPPTTS 372          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A5D6XNV3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNV3_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.410e-64
Identity = 140/357 (39.22%), Postives = 184/357 (51.54%), Query Frame = 1
Query:  211 ADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMP 1272
            A  T          L HLPR R  LLC+++VP+HM P ++L F A F+  V S+R+L+        DP ++    M LLQ  SQ  AD FFL  NG  FNS E+  C++VFV    FD  A  S           XXXXXXXXXXX                   +AR   P XX                                       +  TC +C++R++   S +LTT+CNH+FH +CL +W+ S CPVCR+ H +    S C+ C  T++LW+CLICG V CG    +H + HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P  +S ER Q+P
Sbjct:   92 APRTADAGAGGSGPLQHLPRERNTLLCIVTVPSHMAPVELLEFLAGFRADVASVRVLQ--------DPDRS--NCMALLQFASQERADQFFLAHNGTYFNSIEQERCKIVFVRSIEFDAVAGGSGGCAATGVEERXXXXXXXXXXXRSRKSLTV-----------SARTLFPXXXPGMT-----------------------------------EIPTCAVCLDRLDASASGILTTLCNHTFHCDCLFRWEGSSCPVCRYSHGDI--VSACEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPSSSSGERSQIP 390          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A833TQ33_PHYIN (Zn-finger in ubiquitin-hydrolases and other protein n=34 Tax=Phytophthora TaxID=4783 RepID=A0A833TQ33_PHYIN)

HSP 1 Score: 225 bits (574), Expect = 1.420e-64
Identity = 126/353 (35.69%), Postives = 175/353 (49.58%), Query Frame = 1
Query:  235 FNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
            +++ +    LP+ R  L+C+++VP+HM P ++L F A F+E +  +RIL+        DP ++    MVL+Q  SQ  AD FF   NGK FNS E+  C++VFV    FDP    +                                       PR+ RR S                                      AG   +  TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   D+LW+CLICG V CG    +H + HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P   S ER Q P   S
Sbjct:   58 YSSSSSTQQLPKERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFQAHNGKYFNSIEQERCKIVFVRSIEFDPVIGENDPDYDALEEKRADGEDDAPP------------------SPRSERRAS--------------------------NAQMRKLFPPPPAGMT-EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTADHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSGERSQTPPTTS 353          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: H3GNL2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNL2_PHYRM)

HSP 1 Score: 224 bits (571), Expect = 4.880e-64
Identity = 124/344 (36.05%), Postives = 170/344 (49.42%), Query Frame = 1
Query:  262 LPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
            LP  R  L+C+++VP+HM P ++L F A F++ +  +RIL+        DP ++    MVL+Q  SQ  AD FFL  NGK FNS E+  C++VFV    FDP                                            PR+ RR S                                           +  TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C  T++LW+CLICG V CG    +H + HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE  +P   S ER Q P   S
Sbjct:   70 LPTERSTLVCVVTVPSHMSPVEILEFLASFRQDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFLDHNGKYFNSIEQERCKIVFVRSIEFDPVLGGDHPDCDALEEKQTDEETAVAAATPL--------------SPRSERRASSAQMRKLFPPPPVGMT---------------------------EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPNPSNMSGERSQNPPTTS 360          
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A3M6VJ33_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ33_9STRA)

HSP 1 Score: 223 bits (569), Expect = 6.850e-64
Identity = 123/341 (36.07%), Postives = 168/341 (49.27%), Query Frame = 1
Query:  259 HLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMP 1272
            HLP  R  L+C+++VP+HM P D+L F   F+E +  +RIL+        DP +     MVL+Q +SQ  AD FF   NGK FNS E+  C++VFV    FDP  +                                         PR+ +R S                                           +  TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   ++LW+CLICG V CG    +H + HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   PK  S ER Q P
Sbjct:   61 HLPSERSALVCVVTVPSHMSPVDILDFLTSFREDIALVRILK--------DPERN--NCMVLMQFKSQERADQFFQDHNGKYFNSIEQERCKIVFVRSIEFDPVMNEGYSDCDALEEKQAEKKDVVAATL----------------SPRSEKRNSSAQMRKLFPLPPVGMT---------------------------EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKEHYQDTLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPKNHSGERSQNP 346          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPZ1_ECTSI4.980e-21887.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0J5_9PHAE1.020e-12391.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPP8_9STRA3.530e-8242.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K685_9PHAE1.040e-7182.28BRAP2 domain-containing protein n=1 Tax=Ectocarpus... [more]
W2PVR5_PHYPN1.420e-6536.63Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
M4B1G8_HYAAE8.440e-6532.79Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A5D6XNV3_9STRA1.410e-6439.22Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A833TQ33_PHYIN1.420e-6435.69Zn-finger in ubiquitin-hydrolases and other protei... [more]
H3GNL2_PHYRM4.880e-6436.05Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3M6VJ33_9STRA6.850e-6436.07Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17473contigEcto-sp13_S_contig17473:1289..3501 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score621.7
Seed ortholog evalue2.6e-175
Seed eggNOG ortholog2880.D7FPZ1
Model size1305
KEGG koko:K00413,ko:K10632
KEGG Pathwayko00190,ko01100,ko02020,ko04014,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04014,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000165,GO:0003674,GO:0003824,GO:0004842,GO:0005048,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008139,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010646,GO:0010648,GO:0012505,GO:0016020,GO:0016310,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0031090,GO:0031965,GO:0031967,GO:0031975,GO:0032182,GO:0032446,GO:0032991,GO:0033218,GO:0035556,GO:0036211,GO:0042221,GO:0042277,GO:0042493,GO:0042802,GO:0043130,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045471,GO:0046677,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0097305,GO:0140096,GO:1901564,GO:1901700,GO:1902494,GO:1990234
Exons4
EggNOG free text desc.nuclear localization sequence binding
EggNOG OGsKOG0804@1,KOG0804@2759
EC2.3.2.27
Cds size1305
COG Functional cat.GO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462910.2690156-CDS-Ecto-sp13_S_contig17473:1288..17501681462910.2690156-CDS-Ecto-sp13_S_contig17473:1288..1750Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17473 1289..1750 +
1681462910.2805855-CDS-Ecto-sp13_S_contig17473:2191..27461681462910.2805855-CDS-Ecto-sp13_S_contig17473:2191..2746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17473 2192..2746 +
1681462910.289527-CDS-Ecto-sp13_S_contig17473:2981..31081681462910.289527-CDS-Ecto-sp13_S_contig17473:2981..3108Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17473 2982..3108 +
1681462910.29812-CDS-Ecto-sp13_S_contig17473:3340..35011681462910.29812-CDS-Ecto-sp13_S_contig17473:3340..3501Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17473 3341..3501 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17473.5241.1prot_Ecto-sp13_S_contig17473.5241.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17473 1289..3501 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17473.5241.1

>prot_Ecto-sp13_S_contig17473.5241.1 ID=prot_Ecto-sp13_S_contig17473.5241.1|Name=mRNA_Ecto-sp13_S_contig17473.5241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=435bp
MDGAVSLEFMTGNPQLGVLSGRLTYLESSINESNDGSSSRNEEKGHARRS
SSSSSSSSSISWQGSSSSTVADTTCSPSFNADALLDHLPRRRGKLLCLLS
VPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQ
MESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSPPNTPP
AGSTVGAAATAANTAATTSGGGAISSSAGTSPQPRTARRFSPIGGGGPGA
AAAAAAAAAGVGGGSSPEKTAAAAAVAQAAGWEYDASTCVICMERMESRV
LTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVC
LICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIH
NKADGKLVEISDPKQTSEERPQMPARLSDVQVRC*
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mRNA from alignment at Ecto-sp13_S_contig17473:1289..3501+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17473.5241.1 ID=mRNA_Ecto-sp13_S_contig17473.5241.1|Name=mRNA_Ecto-sp13_S_contig17473.5241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17473:1289..3501+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGGTGCCGTAAGTCTGGAGTTCATGACCGGAAATCCACAGCTCGG AGTGCTTTCGGGAAGGTTGACCTACCTCGAAAGCAGCATCAACGAGAGCA ACGACGGTTCCTCGTCGCGCAACGAAGAGAAGGGCCACGCTCGCCGAAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCTGGCAGGGCTCCAGCAG CAGTACCGTCGCCGACACCACATGCTCCCCTAGTTTCAATGCCGACGCCC TCCTCGACCACCTCCCTCGGCGTCGGGGCAAGCTGCTGTGCCTCCTGTCG GTGCCAGCGCACATGGTTCCTACAGATATGCTGCACTTCGCCGCGCCGTT CAAGGAGCAGGTGCACTCCCTCCGCATCCTCCGCCCTTGCAACCCGGTGG GACCGAGTGATCCCGCCAAGACGCCAGCGGAGTACATGGTCCTCCTGCAG ATGGAGAGTCAGGTTCGTGCGTATATGTAGTTGGACCCTGGTTTTACTTC GCGGGAGCAGCACACGTTGTTGTCGTTGCCGGCGTGGGAGCAGTCTTGCA GTGCTGCAGTGTGCTTTGTTGCCAGAACAAATTTTTTCATGCCTGGGGAA CTGAGCCGTGGCGCGTACGGAAATGGACTGCCCATGTCACGAGCACCCCG GCTCACGAGCACCAGGTATAACTAGCTCTGGGTTAACAAGTTTTTTTTGG CGTATGACCAATACAATGATGTACAATTCAACTTGTGGATCTGCGTACAG GTATATATGATATCACGCGCCCGCTGTATTTGAAGCAGTGCAAAGACCTG CTTGAAACACTGTACCCACCGGGTTCACTAATGCTGTTGTACTGTTTGTG CAACGTCGCGTACACGAGAACGATCACGCCCCCTTTTTGCCTCCGTCACA CAGTCCAGCGCCGACGACTTCTTCCTCCAGTGCAACGGCAAGCGCTTCAA CAGCTTCGAGGAGACGACCTGCAGAGTTGTCTTCGTCGCCAAGGCAACTT TCGACCCCCCGGCCGACTCTTCCCCCCCGAACACGCCCCCCGCGGGGTCC ACGGTCGGGGCTGCTGCAACGGCAGCAAATACCGCCGCCACCACAAGCGG TGGCGGTGCCATCTCGTCCTCAGCAGGAACGTCACCGCAGCCTCGCACGG CCCGGCGCTTTTCGCCTATCGGCGGTGGCGGGCCTGGGGCGGCGGCGGCC GCAGCGGCCGCCGCGGCCGGAGTAGGGGGAGGGTCATCTCCAGAGAAGAC TGCTGCTGCTGCCGCGGTTGCGCAGGCGGCCGGGTGGGAATATGACGCGT CGACGTGCGTGATCTGCATGGAGCGCATGGAGTCGAGGGTGCTCACGACG GTGTGCAACCACAGCTTCCACGTCGAGTGCCTCATGAAGTGGCAGGACAG CCCGTGCCCGGTTTGCCGCTTTCACCACAACAATGCTAGCGAGGCGTCCA CGTGTCAGGTACGGGTAGGGCGGAGTGGAGGGTATGTAGGGTGACGATAA GGACTGGCGTGGTGTCTCTGGTGCGGTGAGCTGGCTGGCGTGCGGGGTTG CTGGTTGGTAGGTCGGTAAAAGGTGCATTTTACTCTCCCCCGACCCGCCT GGCCGTTTAACCACGCCTGCTGTGGGTGTATACTGCTGCCTAATTTTGGT GGCGTTTTTTCCCTGCTTGCCCTCTTTCCCCTCGAGCGCGTAGGAGTGCC AAGCAACAGACAACCTCTGGGTTTGCTTGATTTGCGGAAGCGTTCTGTGT GGATCTCGACATGAAGATCACATTCGCGGGCACTACAACAGCACACTGCA CGCGTACGCCATCGAAATAGGTGAACTCTTTGTTTTACGCCGCGCCTCCT CCTTCACTATCTGCTCGCGACCGGTTTGTCTCTTTTTTTGTTGCGTTGCT TGTCCTTGAACAGGACCTCTGTGTAGCATCATTCCGTCTTGTGCTCTTGT GTTAGTATCGAGAAGTTCCCTACTATGTAATATGCGAACAGCTCTTCGTC ATCAAGCCGTTTCACGACTGTAAAACGACCCTCCCCCCGCGCGCGGCATC AGAGACCCAACAAGTGTGGGACTTCGCGGGAGACGGATTTGTCCACCGAC TGATCCATAACAAGGCAGACGGGAAGCTCGTGGAGATTTCGGACCCAAAA CAGACGTCGGAGGAGCGACCACAGATGCCCGCTCGTCTGTCGGATGTCCA AGTACGATGTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17473:1289..3501+

>mRNA_Ecto-sp13_S_contig17473.5241.1 ID=mRNA_Ecto-sp13_S_contig17473.5241.1|Name=mRNA_Ecto-sp13_S_contig17473.5241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17473:1289..3501+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGGTGCCGTAAGTCTGGAGTTCATGACCGGAAATCCACAGCTCGG
AGTGCTTTCGGGAAGGTTGACCTACCTCGAAAGCAGCATCAACGAGAGCA
ACGACGGTTCCTCGTCGCGCAACGAAGAGAAGGGCCACGCTCGCCGAAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCTGGCAGGGCTCCAGCAG
CAGTACCGTCGCCGACACCACATGCTCCCCTAGTTTCAATGCCGACGCCC
TCCTCGACCACCTCCCTCGGCGTCGGGGCAAGCTGCTGTGCCTCCTGTCG
GTGCCAGCGCACATGGTTCCTACAGATATGCTGCACTTCGCCGCGCCGTT
CAAGGAGCAGGTGCACTCCCTCCGCATCCTCCGCCCTTGCAACCCGGTGG
GACCGAGTGATCCCGCCAAGACGCCAGCGGAGTACATGGTCCTCCTGCAG
ATGGAGAGTCAGTCCAGCGCCGACGACTTCTTCCTCCAGTGCAACGGCAA
GCGCTTCAACAGCTTCGAGGAGACGACCTGCAGAGTTGTCTTCGTCGCCA
AGGCAACTTTCGACCCCCCGGCCGACTCTTCCCCCCCGAACACGCCCCCC
GCGGGGTCCACGGTCGGGGCTGCTGCAACGGCAGCAAATACCGCCGCCAC
CACAAGCGGTGGCGGTGCCATCTCGTCCTCAGCAGGAACGTCACCGCAGC
CTCGCACGGCCCGGCGCTTTTCGCCTATCGGCGGTGGCGGGCCTGGGGCG
GCGGCGGCCGCAGCGGCCGCCGCGGCCGGAGTAGGGGGAGGGTCATCTCC
AGAGAAGACTGCTGCTGCTGCCGCGGTTGCGCAGGCGGCCGGGTGGGAAT
ATGACGCGTCGACGTGCGTGATCTGCATGGAGCGCATGGAGTCGAGGGTG
CTCACGACGGTGTGCAACCACAGCTTCCACGTCGAGTGCCTCATGAAGTG
GCAGGACAGCCCGTGCCCGGTTTGCCGCTTTCACCACAACAATGCTAGCG
AGGCGTCCACGTGTCAGGAGTGCCAAGCAACAGACAACCTCTGGGTTTGC
TTGATTTGCGGAAGCGTTCTGTGTGGATCTCGACATGAAGATCACATTCG
CGGGCACTACAACAGCACACTGCACGCGTACGCCATCGAAATAGAGACCC
AACAAGTGTGGGACTTCGCGGGAGACGGATTTGTCCACCGACTGATCCAT
AACAAGGCAGACGGGAAGCTCGTGGAGATTTCGGACCCAAAACAGACGTC
GGAGGAGCGACCACAGATGCCCGCTCGTCTGTCGGATGTCCAAGTACGAT
GTTGA
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