mRNA_Ecto-sp13_S_contig17473.5241.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: D7FPZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ1_ECTSI) HSP 1 Score: 620 bits (1598), Expect = 4.980e-218 Identity = 380/433 (87.76%), Postives = 384/433 (88.68%), Query Frame = 1
Query: 1 MDGAVSLEFMTGNPQLGVLSGRLTYLESSINESNDGSSSRNXXXXXXXXXXXXXXXXXXISWQGSSSSTVADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLSDVQ 1293
MDGAVSLEFMTGNPQLGVLSGRLTYLESS NES DGSS XXXXXXXXXXXXXXX GS+SSTVA+TT SPSFNAD LLDHLP+RRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFD PADSS XXXXXXXXXX Q RTAR FSPI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQA DNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDP+QTSEERPQMPARLSDVQ
Sbjct: 1 MDGAVSLEFMTGNPQLGVLSGRLTYLESSRNESGDGSSXX----XXXXXXXXXXXXXXXXXXXGSNSSTVANTTYSPSFNADVLLDHLPQRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDLPADSSPPHTPPAGSAVGATAXXXXXXXXXXGSGGISSSAGTPPQLRTARHFSPIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQAADNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 429
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A6H5K0J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J5_9PHAE) HSP 1 Score: 380 bits (975), Expect = 1.020e-123 Identity = 256/280 (91.43%), Postives = 259/280 (92.50%), Query Frame = 1
Query: 454 ESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLSDVQ 1293
++ SSADDFFLQCNGKRFNSFEETTCRVVFVAKATFD PADSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICME MESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDP+QTSEERPQMPARLSDVQ
Sbjct: 5 KTASSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDLPADSSPPHTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMEHMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 284
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A835YPP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP8_9STRA) HSP 1 Score: 275 bits (704), Expect = 3.530e-82 Identity = 158/374 (42.25%), Postives = 199/374 (53.21%), Query Frame = 1
Query: 187 QGSSSSTVADTTCSP-SFNADALLD---HLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHED-HIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLSDVQ 1293
Q + ++ V +T P S + A L LP RG LLC+ S+PAHMVPTDML APF++ + +RILRPC SD + EYMV+LQM +Q AD F+ Q NG+ F+S EE C VVFVA +F D S A P + G E CVIC E++E LTT C H+FH+EC+ WQDSPCPVCRFHHN + + STCQEC + N+ VCLICG V CG R + H+ H+ +TLHAYA+++ETQQVWDFAG GFVHRLI+NKADGK+VE ++P S ERPQ P++LSDVQ
Sbjct: 185 QDAGAALVTETALQPASMRSQAALSATCQLPEGRGCLLCITSMPAHMVPTDMLQLFAPFRQSMSYVRILRPCRG---SDSERL--EYMVVLQMLNQELADSFYRQYNGQPFSSMEEACCEVVFVASISFIDAQDGSCDSISALGALPNACATA------------------------AAAAAGPADTSQ----------------------------ALHSGGAEAREDACVICFEKLEGGTLTTACKHTFHIECIALWQDSPCPVCRFHHNGSGDDSTCQECGRSVNVHVCLICGYVGCGGREQGGHMSQHHLATLHAYALDVETQQVWDFAGGGFVHRLIYNKADGKMVEANNPGHASGERPQAPSQLSDVQ 501
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A6H5K685_9PHAE (BRAP2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K685_9PHAE) HSP 1 Score: 232 bits (592), Expect = 1.040e-71 Identity = 130/158 (82.28%), Postives = 136/158 (86.08%), Query Frame = 1
Query: 1 MDGAVSLEFMTGNPQLGVLSGRLTYLESSINESNDGSSSRNXXXXXXXXXXXXXXXXXXISWQGSSSSTVADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSAD 474
MDGAVSLEFMTGNPQLGVLSGRLTYLE+S NES+DGS SR XXXXXXXX GS+SSTVADTT SP+FNAD LLDHLP+RRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQ +
Sbjct: 1 MDGAVSLEFMTGNPQLGVLSGRLTYLETSSNESSDGSLSRKEEKGHARTSXXXXXXXX-----GSNSSTVADTTYSPNFNADVLLDHLPQRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQEGVE 153
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: W2PVR5_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PVR5_PHYPN) HSP 1 Score: 224 bits (570), Expect = 1.420e-65 Identity = 126/344 (36.63%), Postives = 170/344 (49.42%), Query Frame = 1
Query: 262 LPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
LP R L+C+++VP+HM P ++L F A F+E + +RIL+ DP ++ MVL+Q SQ AD FF NGK FNS E+ C++VFV FDP D PR+ RR S AG + TC +C++R++ S +LTT+CNHSFH +CL +W+ S CPVCR+ H + S+C+ C ++LW+CLICG V CG +H + HY TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE P S ER Q P S
Sbjct: 70 LPNERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFQVHNGKYFNSIEQERCKIVFVRSIEFDPVIDEDDPDCDALEEKHTDGEDTAAPMPS---------------SPRSERRAS--------------------------NAQIRKLFPPPPAGMT-EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSGERSQTPPTTS 359
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: M4B1G8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1G8_HYAAE) HSP 1 Score: 225 bits (573), Expect = 8.440e-65 Identity = 142/433 (32.79%), Postives = 204/433 (47.11%), Query Frame = 1
Query: 16 SLEFMTGNPQLGVLSGRL-------TYLESSINESNDGSSSRNXXXXXXXXXXXXXXXXXXISWQGSSSSTVADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
S F+TGNPQ+ V++G+L TY +++ SN +SS S+ G+S+++ A L LPR R L+C+++VP+HM P ++L F + F+E + +RIL+ D + MVL+Q ++Q AD FFL+ GK FNS E+ C++VFV FD A + RT+R AG + TC +C++R++ S +LTT+CNHSFH +CL +W+ S CPVCR+ H + S+C+ C ++LW+CLICG V CG +H + HY TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE P S ER Q P S
Sbjct: 25 SASFLTGNPQVRVITGKLRFYRADETYTTPTLSISNHTNSSS--------------------SFSGTSTTSSA-----------LLTQQLPRERSALVCVVTVPSHMSPVEILEFLSSFRENIALVRILK--------DSERN--NCMVLVQFQTQDRADQFFLEHTGKYFNSIEQERCKIVFVRSIEFDLVAGEDQLTCDALEEKDAGGDKIVASGLMSSQS-----------ESRTSRM------------------------------QMRKLFPLPPAGMT-EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKEHYQDTLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSSERSQHPPTTS 372
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A5D6XNV3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNV3_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.410e-64 Identity = 140/357 (39.22%), Postives = 184/357 (51.54%), Query Frame = 1
Query: 211 ADTTCSPSFNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMP 1272
A T L HLPR R LLC+++VP+HM P ++L F A F+ V S+R+L+ DP ++ M LLQ SQ AD FFL NG FNS E+ C++VFV FD A S XXXXXXXXXXX +AR P XX + TC +C++R++ S +LTT+CNH+FH +CL +W+ S CPVCR+ H + S C+ C T++LW+CLICG V CG +H + HY TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE P +S ER Q+P
Sbjct: 92 APRTADAGAGGSGPLQHLPRERNTLLCIVTVPSHMAPVELLEFLAGFRADVASVRVLQ--------DPDRS--NCMALLQFASQERADQFFLAHNGTYFNSIEQERCKIVFVRSIEFDAVAGGSGGCAATGVEERXXXXXXXXXXXRSRKSLTV-----------SARTLFPXXXPGMT-----------------------------------EIPTCAVCLDRLDASASGILTTLCNHTFHCDCLFRWEGSSCPVCRYSHGDI--VSACEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPSSSSGERSQIP 390
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A833TQ33_PHYIN (Zn-finger in ubiquitin-hydrolases and other protein n=34 Tax=Phytophthora TaxID=4783 RepID=A0A833TQ33_PHYIN) HSP 1 Score: 225 bits (574), Expect = 1.420e-64 Identity = 126/353 (35.69%), Postives = 175/353 (49.58%), Query Frame = 1
Query: 235 FNADALLDHLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
+++ + LP+ R L+C+++VP+HM P ++L F A F+E + +RIL+ DP ++ MVL+Q SQ AD FF NGK FNS E+ C++VFV FDP + PR+ RR S AG + TC +C++R++ S +LTT+CNHSFH +CL +W+ S CPVCR+ H + S+C+ C D+LW+CLICG V CG +H + HY TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE P S ER Q P S
Sbjct: 58 YSSSSSTQQLPKERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFQAHNGKYFNSIEQERCKIVFVRSIEFDPVIGENDPDYDALEEKRADGEDDAPP------------------SPRSERRAS--------------------------NAQMRKLFPPPPAGMT-EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTADHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSGERSQTPPTTS 353
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: H3GNL2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNL2_PHYRM) HSP 1 Score: 224 bits (571), Expect = 4.880e-64 Identity = 124/344 (36.05%), Postives = 170/344 (49.42%), Query Frame = 1
Query: 262 LPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMPARLS 1284
LP R L+C+++VP+HM P ++L F A F++ + +RIL+ DP ++ MVL+Q SQ AD FFL NGK FNS E+ C++VFV FDP PR+ RR S + TC +C++R++ S +LTT+CNHSFH +CL +W+ S CPVCR+ H + S+C+ C T++LW+CLICG V CG +H + HY TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE +P S ER Q P S
Sbjct: 70 LPTERSTLVCVVTVPSHMSPVEILEFLASFRQDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFLDHNGKYFNSIEQERCKIVFVRSIEFDPVLGGDHPDCDALEEKQTDEETAVAAATPL--------------SPRSERRASSAQMRKLFPPPPVGMT---------------------------EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPNPSNMSGERSQNPPTTS 360
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Match: A0A3M6VJ33_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ33_9STRA) HSP 1 Score: 223 bits (569), Expect = 6.850e-64 Identity = 123/341 (36.07%), Postives = 168/341 (49.27%), Query Frame = 1
Query: 259 HLPRRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDPPADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRTARRFSPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERME---SRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPKQTSEERPQMP 1272
HLP R L+C+++VP+HM P D+L F F+E + +RIL+ DP + MVL+Q +SQ AD FF NGK FNS E+ C++VFV FDP + PR+ +R S + TC +C++R++ S +LTT+CNHSFH +CL +W+ S CPVCR+ H + S+C+ C ++LW+CLICG V CG +H + HY TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE PK S ER Q P
Sbjct: 61 HLPSERSALVCVVTVPSHMSPVDILDFLTSFREDIALVRILK--------DPERN--NCMVLMQFKSQERADQFFQDHNGKYFNSIEQERCKIVFVRSIEFDPVMNEGYSDCDALEEKQAEKKDVVAATL----------------SPRSEKRNSSAQMRKLFPLPPVGMT---------------------------EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKEHYQDTLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPKNHSGERSQNP 346 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17473.5241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17473.5241.1 >prot_Ecto-sp13_S_contig17473.5241.1 ID=prot_Ecto-sp13_S_contig17473.5241.1|Name=mRNA_Ecto-sp13_S_contig17473.5241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=435bp MDGAVSLEFMTGNPQLGVLSGRLTYLESSINESNDGSSSRNEEKGHARRSback to top mRNA from alignment at Ecto-sp13_S_contig17473:1289..3501+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17473.5241.1 ID=mRNA_Ecto-sp13_S_contig17473.5241.1|Name=mRNA_Ecto-sp13_S_contig17473.5241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17473:1289..3501+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17473:1289..3501+ >mRNA_Ecto-sp13_S_contig17473.5241.1 ID=mRNA_Ecto-sp13_S_contig17473.5241.1|Name=mRNA_Ecto-sp13_S_contig17473.5241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17473:1289..3501+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |