mRNA_Ecto-sp13_S_contig17453.5231.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A6H5JN40_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN40_9PHAE) HSP 1 Score: 430 bits (1105), Expect = 3.480e-141 Identity = 218/224 (97.32%), Postives = 219/224 (97.77%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRYIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIPPILAMLSERVRTVSDG 672
VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDL+EYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRYIEMLLDMCGRVMKDERQSEKEARTAVQL MVVLHNCKGRIDEYIPPILAMLSERVRT
Sbjct: 571 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLIEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPILAMLSERVRTAEQA 794
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A6U2DQK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2DQK1_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.240e-60 Identity = 103/230 (44.78%), Postives = 147/230 (63.91%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGD----RYIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIPP----ILAMLSERVRTVS 666
VVAAL +II++F DHI PHA+AL QL F Y AG +DDDAAMAA+Q +E V+TVL+ PEL+ +ME L+P+ Q+ DG+ +EY+E A D+L+FLTY+ IS QLW FP++Y +D+WAFD ++ M P++N+I + F+ G + D YI+++ M + + +ER SE E R AV L M VLHNC+G +D Y+P +LA L ++V S
Sbjct: 42 VVAALQVIIDRFGDHIEPHAAALVTQLAAAFRTYCGAGEEDDDAAMAAAQCLECVATVLKGICERPELYKSMEPQLVPLCLQILGNDGEYIEYLEYALDILTFLTYFPDEISPQLWEAFPLIYVAFDQWAFDYLNLMVPPLENFIGKSPRQFLQGTATTPDGATVSYIDLVFSMVAKTVAEERSSESECRKAVSLYMSVLHNCRGLVDAYLPMMNDIVLAKLGQQVNAES 271
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A7S4RDK4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDK4_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.950e-56 Identity = 101/225 (44.89%), Postives = 154/225 (68.44%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSA--EGD-RYIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIPPI----LAMLSERV 654
VVAAL +II++F +HI PHA AL QL+ FL Y AG DDDDAAMAA+Q +E ++TVL+ PEL+ ME L+P++ Q+ DG+ +EY+E A D+L+FLTY+ IS +LW FP++Y +D+WAFD ++ M P++N+I + F+AG ++ EG+ +YIE++ + + + +ER SE E+R A+ L M +LHNC+G++D Y+P + LA L ++V
Sbjct: 634 VVAALQVIIDQFGEHIEPHAVALVTQLSTAFLNYVGAGEDDDDAAMAAAQCLECIATVLKGICERPELYRTMEPQLIPLVLQILGNDGEYIEYLEYALDILTFLTYFPDHISPELWQAFPLIYIAFDQWAFDYLNLMVPPLENFIGKAPQQFLAGTASTPEGEVKYIELVFSIVAKTVAEERSSESESRKALSLYMSILHNCRGQVDLYLPMMNDIALAKLGQQV 858
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: B8C038_THAPS (Ran binding protein 7 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C038_THAPS) HSP 1 Score: 196 bits (499), Expect = 5.170e-54 Identity = 95/213 (44.60%), Postives = 141/213 (66.20%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAG--RSAEGDR-YIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIPPI 630
VVAAL +II+ F +HI PHA AL QL+ F Y AG +DDDAAMAA+Q +E ++TVL+ T PE++ ME HL+P++ + DG+ +EY+E A D L+FLTY+ +S QLW FP++Y +D WAFD + M P++N+I++ F+ G + EG YI+M+ + + ++++R SE EAR ++ L M VLHNC G++D Y+P I
Sbjct: 615 VVAALQVIIDTFGEHIEPHAVALVTQLSTAFANYIEAGEEDDDAAMAAAQCLECINTVLKGTCEHPEVYKGMEGHLIPLVLMILGHDGEYLEYVEFALDTLTFLTYFPLQLSPQLWEAFPLVYNAFDNWAFDYLVLMTPPLNNFIAKDPQHFLTGGGETTEGRMSYIDMIFSIVSKTVQEDRSSESEARKSLTLYMSVLHNCTGQVDSYLPTI 827
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A7S4MVL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVL2_9STRA) HSP 1 Score: 196 bits (497), Expect = 6.790e-54 Identity = 99/226 (43.81%), Postives = 145/226 (64.16%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGD----RYIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIPPI----LAMLSERV 654
VVAAL +II++F DHI PHA AL QL F Y AG +DDDAA+AA+Q +E V+TVL+ PEL+ +ME L+P+ Q+ DG+ +EY+E A D+L+FLTY+ IS +LW FP++Y +D+WAFD ++ M P++N+I + F+ G + D YI+++ M + + +ER SE E R A+ L M VLHNC+G +D Y+P + LA L ++V
Sbjct: 626 VVAALQVIIDRFGDHIEPHAVALVTQLATAFQNYCGAGEEDDDAALAAAQCLECVATVLKGICERPELYKSMEPQLVPLCLQILGNDGEYIEYLEYALDILTFLTYFPEEISPRLWEAFPLIYVAFDQWAFDYLNLMVPPLENFIGKSPTQFLQGTATTPDGTSVSYIDLVFSMVAKTVAEERSSEPECRKALSLYMSVLHNCRGLVDAYLPMMNDIALAKLGQQV 851
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A835YT27_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT27_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.150e-52 Identity = 97/232 (41.81%), Postives = 144/232 (62.07%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRYIEMLLDMCGR--------------VMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIPPILAMLSERV 654
VV L+ II+KF DHI PHA L +L+ CF+EYA G +DDDAAMAA Q +EAV+TVL S P L+PAME L+PML + S DG+ +EY ENA +V++ A +S LWS FP+L+ +DKWA D ++N+ PI+N+ISR + + G + +G Y+ ++++M V+ D+RQ+E E + QL LHNC+G +D ++P +L +++ R+
Sbjct: 574 VVQGLETIIDKFGDHIGPHALTLIQKLSDCFMEYAKEGYEDDDAAMAAGQCMEAVTTVLHSAHRTPNLYPAMEECLMPMLRTILSNDGEYIEYFENAVEVIA------AHVSPTLWSTFPLLFDAFDKWAADYVTNIRTPIENFISRDSKTYACGATPQGVPYVTLVVNMARAXXXXXXXXXXXXHAVLADQRQTEAEGKAVAQLLSSTLHNCRGLVDAHVPAVLDIVAARM 799
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A7S1VG73_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VG73_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.150e-52 Identity = 91/215 (42.33%), Postives = 149/215 (69.30%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSD--DDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRS--AEG-DRYIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIPPI 630
VVAAL +II++F++HI PHA AL +QLT+ F +Y +AG D DDDAAMAA+Q +E ++TVL+ PEL+ ++E L+P++ + DG+ +EY+E A D+L+FLTY+ I+ +LW FP++Y+ +D+WA+D +S M P+ ++I++ ++F+ G++ EG YI+M+ M + + ++R +E E R A+ L M +LH+C G+ID +P I
Sbjct: 185 VVAALQVIIDQFENHIEPHAVALVNQLTQAFNQYCTAGEDEDDDDAAMAAAQCLECIATVLKGICEKPELYKSLEPTLIPLILTILGNDGNFIEYLECALDILTFLTYFPEEITPELWQAFPLIYQAFDQWAYDYLSLMVPPLQSFIAKNPNIFLTGQANLPEGPSTYIDMVFQMVAKTVANDRSTESEVRQALTLFMSILHSCPGQIDPLLPVI 399
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A7S3LFB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFB3_9STRA) HSP 1 Score: 182 bits (463), Expect = 4.010e-51 Identity = 90/213 (42.25%), Postives = 144/213 (67.61%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSD--DDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRS--AEGD-RYIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIP 624
VV+AL ++++KF DHI PHA AL QL+ F +Y + G D DDDAA+AA+Q +E ++TVL+ + +E LLP++ ++ DGD +EY+E+A D+LSFLTY+ + IS ++W FP++Y +D+WA+D ++ M I +YIS+G DVF+AG + EG Y+++++ M + + ++R SE E R A+ L M +L++C GRI+ Y+P
Sbjct: 55 VVSALQVLLDKFGDHIEPHAVALVTQLSNAFAQYCTTGEDQDDDDAALAAAQCLECIATVLKGVCGKESMIRVLEPMLLPLVLKILGNDGDFIEYLESALDILSFLTYFQSQISMEVWQCFPLIYMAFDQWAYDYLNMMVPCIQSYISKGPDVFLAGVAHLPEGQISYLDLVVSMVTKTLTNDRASEVECRFALSLFMTILNHCPGRINPYLP 267
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A7S3QJN0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJN0_9STRA) HSP 1 Score: 187 bits (475), Expect = 8.840e-51 Identity = 98/234 (41.88%), Postives = 147/234 (62.82%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDR---YIEMLLDMCGRVMK---------DERQSEKEARTAVQLTMVVLHNCKGRIDEYIPPI----LAMLSERV 654
V+AAL II++F DHI PHA AL QLT F Y AG DDDDA MAASQ +E ++TVL+ PEL+ +E LLP++ ++ SEDGD +EYIE A ++L+FLTY+ IS +L+ +FP++Y +D+WAFD + M P++N+I + +F++ + ++ Y++M+ M + + D+ S+ E R A+ L M +L NCKG +D Y+P I LA L+E+V
Sbjct: 585 VIAALQSIIDRFGDHIEPHAIALVTQLTTAFNTYCDAGEDDDDALMAASQCLECIATVLKGIHERPELYRQLEPTLLPVIRRIISEDGDFIEYIEYALEILTFLTYFPEDISNELYDIFPLIYVAFDQWAFDYLGQMVPPVENFIGKNPSLFVSRQGVVSNQNMSYVDMVFSMITKTLTSTETYPGGFDDPSSDYEMRKALSLYMSLLLNCKGMLDNYLPSINDIVLAKLAEKV 818
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Match: A0A1Z5JIW4_FISSO (Importin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIW4_FISSO) HSP 1 Score: 181 bits (460), Expect = 9.510e-49 Identity = 93/231 (40.26%), Postives = 153/231 (66.23%), Query Frame = 1
Query: 1 VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDD--AAMAASQVIEAVSTVLQSTKAVPELFPAMESHLLPMLAQVFSEDGDLMEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAG--RSAEGD-RYIEMLLDMCGRVMKDERQSEKEARTAVQLTMVVLHNCKGRIDEYIP----PILAMLSERVRTVS 666
VV+AL +++++F DHI PHA AL QLT F +Y +AG D+DD AA+AA+Q +E V+TVL+ + + ++E LLP++ ++ DGD +EY+E A D+L+FLT++ +S +LW FP++Y +D+WA+D ++ M + +YI +G +VF++G + AEG Y++M++ M + + ++ +E E R A+ L M VL+NC GR+D+YIP +LA L ++V S
Sbjct: 604 VVSALQVLLDRFGDHIEPHAIALVTQLTNTFQQYCTAGEDEDDXDAALAAAQCLECVATVLKGVCSNEHILKSLEPVLLPLVLKILGNDGDFLEYLECAFDILTFLTFFQENLSPELWQAFPLVYIAFDQWAYDYLNMMVPCLLSYIQKGPEVFLSGGFQLAEGHVSYVDMVISMASKTLANDSANESECRFALSLLMGVLNNCHGRVDQYIPFINEVVLAKLGQQVNEES 834 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17453.5231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17453.5231.1 >prot_Ecto-sp13_S_contig17453.5231.1 ID=prot_Ecto-sp13_S_contig17453.5231.1|Name=mRNA_Ecto-sp13_S_contig17453.5231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp VVAALDLIIEKFQDHIAPHASALTHQLTRCFLEYASAGSDDDDAAMAASQback to top mRNA from alignment at Ecto-sp13_S_contig17453:58..3364+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17453.5231.1 ID=mRNA_Ecto-sp13_S_contig17453.5231.1|Name=mRNA_Ecto-sp13_S_contig17453.5231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3307bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17453:58..3364+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17453:58..3364+ >mRNA_Ecto-sp13_S_contig17453.5231.1 ID=mRNA_Ecto-sp13_S_contig17453.5231.1|Name=mRNA_Ecto-sp13_S_contig17453.5231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17453:58..3364+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |