mRNA_Ecto-sp13_S_contig174.5204.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig174.5204.1
Unique NamemRNA_Ecto-sp13_S_contig174.5204.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: D8LS95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS95_ECTSI)

HSP 1 Score: 563 bits (1452), Expect = 4.780e-199
Identity = 288/303 (95.05%), Postives = 291/303 (96.04%), Query Frame = 2
Query:  110 MLRLGSAAIVFTMLCALSGIATGSPALTSQRQWTGTRLHGVPVLPLEQGARGGAGQDGVPKELGAGLRPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLRMDVVNRALFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTGKGLLGALGCATALTLANSFVLAKATFESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWLFG 1018
            MLRL SAAIVFT LCALSGIATGSPAL SQ+QWT TRLHGVPVLPL QGARGGAGQD VPKELGAGLRPRESYH+SRKTFHFSTIMAFAVVYSAKL QRDFARGMAALDACVLAGELARLR+DVVNR LFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGM QLALGDPVAALCGHATRSV WSRV TGKGLLGALGCATALTLANSFVLAKA FESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWLFG
Sbjct:    1 MLRLRSAAIVFTTLCALSGIATGSPALASQQQWTDTRLHGVPVLPLVQGARGGAGQDSVPKELGAGLRPRESYHISRKTFHFSTIMAFAVVYSAKLPQRDFARGMAALDACVLAGELARLRVDVVNRVLFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMLQLALGDPVAALCGHATRSVGWSRVGTGKGLLGALGCATALTLANSFVLAKARFESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWLFG 303          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: A0A6U5JUM7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5JUM7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.690e-24
Identity = 90/259 (34.75%), Postives = 126/259 (48.65%), Query Frame = 2
Query:  308 LRPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLR--MDVVNRALFRVFGAFMRAHELK-KFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTG-------KGLLGALGCATALTLANSFVLAKATF----ESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGF-----PLAFDDNAALPVLGAMGAAVVFRVLGLGSCE----LRPWLF 1015
            L+ R S +L RK  H    + F ++    + ++ F   M  L    L  EL R R     +N AL  + G  +R HE+  KF+G +Y   G+ +TSA+F K  A LG+FQLA+ DP A+  G +TR V WSR+ +G       KG LG LG A A    N  VL  A F      G   L    LA GM  A+A   +++VP+P   +P + F     P   DDN  +P+     A  +F+ L   SC     L P++F
Sbjct:  156 LKSRNSMNLRRKVLHAGFGLFFGILNHV-VPRKYFLGAMTILSTGTLCMELLRYRPGFSWMNDALHTILGGSLRRHEMDGKFTGSLYFFVGVTVTSALFSKAAATLGIFQLAIADPSASYFGRSTRHVYWSRIESGLGGFGRNKGFLGFLGGALACVPLNYQVLRMAQFGKIVPGGQQALLTASLALGMAGAFA---DLAVPTPALVMPEKVFGVRVPPFHVDDNFVVPIFAGFAATHIFKAL---SCPTDFTLAPFVF 407          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: A0A7S4AI34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI34_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.380e-23
Identity = 90/255 (35.29%), Postives = 125/255 (49.02%), Query Frame = 2
Query:  308 LRPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLR--MDVVNRALFRVFGAFMRAHELK-KFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTG-------KGLLGALGCATALTLAN----SFVLAKATFESGA-----PTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGF-----PLAFDDNAALPVLGAMGAAVVFRVLGLGSCEL 1000
            L+ R + +  RK  H +  M FA ++   + +  F  GM  L    L  EL R R   D +N++L  V G  +R +E++ KF+G +Y  +G+ +TS +FPK  A LG+ QLA+ DP A+  G ATR V WSR+  G       KG+LG LG A +    N    S  L K T  + A     PT+  I LA GM  A A   ++ VP+P  TLP         P   DDN  +PVL       +     +G  EL
Sbjct:  215 LKNRNAANKRRKFMHAAWGMLFASLHHF-IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAGALA---DLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLSGWACVYILAAASIGRNEL 465          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: A0A7S4EJ41_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ41_9STRA)

HSP 1 Score: 112 bits (281), Expect = 7.110e-23
Identity = 90/255 (35.29%), Postives = 125/255 (49.02%), Query Frame = 2
Query:  308 LRPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLR--MDVVNRALFRVFGAFMRAHELK-KFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTG-------KGLLGALGCATALTLAN----SFVLAKATFESGA-----PTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGF-----PLAFDDNAALPVLGAMGAAVVFRVLGLGSCEL 1000
            L+ R + +  RK  H +  M FA ++   + +  F  GM  L    L  EL R R   D +N++L  V G  +R +E++ KF+G +Y  +G+ +TS +FPK  A LG+ QLA+ DP A+  G ATR V WSR+  G       KG+LG LG A +    N    S  L K T  + A     PT+  I LA GM  A A   ++ VP+P  TLP         P   DDN  +PVL       +     +G  EL
Sbjct:  335 LKNRNAANKRRKFMHAAWGMLFASLHHF-IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAGALA---DLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLSGWACVYILAAASIGRNEL 585          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: A0A7S3PXT7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXT7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.310e-16
Identity = 81/257 (31.52%), Postives = 119/257 (46.30%), Query Frame = 2
Query:  308 LRPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLRMDV--VNRALFRVFGAFMRAHELK-KFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTG-------KGLLGALGCATALTLANSFVLAKATF-----ESGAPTLRRIVLAGGMIAAWAAAV---------EVSVPSPQKTLPCE----GFP-LAFDDNAALPVLGAMGAAVVFRVLGLGS 991
            L+ R + +L+RK  H      F  +    + +  F   M  L    L  EL R R     +N  L   FG+ +R  E+  +F+G +Y   G+ IT+A+FP+ +A + +FQLAL DP A+  G  TR V WSR+  G       KGLLG LG A      N   L+KAT+       G   +  + + GG  A   A++         ++ VP+P  T+P +    G P    DDN  +P+  A     +F  LG  S
Sbjct:  211 LKSRNNLNLNRKLMHAGCGFFFGGLNHI-VPKHIFMPCMTVLTTGSLIMELLRYRKGFGWMNDILHFCFGSCLRKSEMDGRFTGNVYYFMGVVITAALFPRDVASMAIFQLALADPSASYFGRQTRHVYWSRIENGFFGVGRNKGLLGFLGGALFCFPFNFLALSKATYFGKTTVDGISKVVPVAVPGGRQAIAIASIALGLAGAFADLCVPTPAITMPKKICGVGMPPFHVDDNIVVPIFSAFACTKIFASLGWTS 466          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: M2VYP9_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VYP9_GALSU)

HSP 1 Score: 60.8 bits (146), Expect = 1.220e-6
Identity = 58/206 (28.16%), Postives = 94/206 (45.63%), Query Frame = 2
Query:  320 ESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLRMDVVNRALFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSR--VRTGKGLLGALGCATALTLANSFVLAKATFESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTL-PCEG-FPLAFDDN 925
            E  H SR+ FH S  +   +++     +  F + +  L   ++  E  RL    +N+   R+F   MR +E ++ SG+ Y LAG+   S      +  + +  LA+GDPVAA+CG      +  R  +++GK + G L C    TL+    L        +  L  I +    ++A    VE   P+PQ  + P    FP+  DDN
Sbjct:   28 EGIHWSRRIFHTSNGILAWILFDHGRNRALFHKVVWILLLSLIFLESIRLHSLYINQLASRLFYPIMRKNETRRLSGMSYYLAGILFASYFESPIVFEVAVIHLAIGDPVAAVCGLLLFPNSRKRWILKSGKNVSGLLACWLICTLSTLCYLYWQGMRGWSIGL--IAILSSFLSAL---VESWTPTPQYIISPFPSLFPIGLDDN 228          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: A0A3B1CQW6_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1CQW6_9ZZZZ)

HSP 1 Score: 59.3 bits (142), Expect = 1.720e-6
Identity = 37/132 (28.03%), Postives = 60/132 (45.45%), Query Frame = 2
Query:  329 HLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACV-LAGELARLRMDVVNRALFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTGKGLLG 721
            H+ RK FH +       VY  +   R     +  +   V + G++AR+++D +NR    +F  FM+  E    +G  Y L G      +F   I+   ++ +++GDP AAL G     V   R   GK + G
Sbjct:   16 HVPRKLFHLTAASMIPTVYYFEPIARQSTLYLTLIVTAVWVTGDIARIKIDSINRLFKTLFKNFMKVKEENSLTGSSYVLIGSSAALLLFSPAISCASIYFMSIGDPSAALAGKTYGRV---RFNNGKSIEG 144          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: A0A1J5KF47_9PROT (Uncharacterized protein n=1 Tax=Bacteriovorax sp. MedPE-SWde TaxID=1860085 RepID=A0A1J5KF47_9PROT)

HSP 1 Score: 57.4 bits (137), Expect = 8.610e-6
Identity = 35/124 (28.23%), Postives = 56/124 (45.16%), Query Frame = 2
Query:  293 ELGAGLRPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLRMDVVNRALFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCG 664
            E     + R   HL R+ FH S  M+  ++Y   LT +     +          E  R++         +V    +RA E  K S  +  L G+ +T   FPK++AL+ +F LA+ DP +A+ G
Sbjct:    3 ETNTTTKTRADLHLPRRFFHLSMGMSCGLIYKHYLTHQQAIHILGIATCIFYVYEQIRIKYPEFRSIFSKVSNYLLRAEEQLKESASIPFLMGILLTILTFPKYMALVAIFTLAISDPFSAVIG 126          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: T0RXI7_9PROT (Phosphatidate cytidylyltransferase-like protein n=1 Tax=Bacteriovorax sp. DB6_IX TaxID=1353530 RepID=T0RXI7_9PROT)

HSP 1 Score: 57.4 bits (137), Expect = 1.160e-5
Identity = 53/223 (23.77%), Postives = 90/223 (40.36%), Query Frame = 2
Query:  311 RPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLRMDVVNRALFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTGKGLLGALGCATALTLANSFVLAKATFESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVL 979
            + R   HL R+ FH S  M+  ++Y   LT +     +          E  R++         +V    +RA E  K S  +  L G+ +T   FPK++AL+ +F LA+ DP +A+ G           R+ +G L   G     TL    ++  A +      L+RI+              +SV S       +   L  DDN  +P++ A    ++  ++
Sbjct:   32 KTRADLHLPRRFFHLSMGMSCGLIYKHYLTHQQAIHILGVATCIFYIYEQFRIKYPEFKSIFSQVSKYLLRAEEQLKESASIPFLMGMLLTILTFPKYMALVAIFTLAISDPFSAVVGIMFGKTKLKENRSLEGCLAFFGS----TLMVHLIVLYALYPES--MLKRII--------------ISVLSSTFVTWFDYLELKIDDNLTIPIVTASSLWIITALI 234          
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Match: A0A4Z0KZ61_9PROT (Uncharacterized protein n=2 Tax=Halobacteriovorax TaxID=1652133 RepID=A0A4Z0KZ61_9PROT)

HSP 1 Score: 55.1 bits (131), Expect = 7.130e-5
Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 2
Query:  311 RPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRDFARGMAALDACVLAGELARLRMDVVNRALFRVFGAFM-RAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMFQLALGDPVAALCG 664
            + R+  H+ R+ FHFS  +   ++Y   LT       +    A  L   L ++R++     L ++   ++ RA E  K S  M  L GL +T   FPK IAL+ +F LA+ DP++A+ G
Sbjct:   36 KTRKDLHMPRRIFHFSMGVIAGMIYKHFLTHTQAVHILGV--ATCLFYILEQIRLNYPENKLTKLGSKYLLRAEEQLKESASMPYLMGLLLTILTFPKTIALVAIFTLAVCDPLSAIIG 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig174.5204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LS95_ECTSI4.780e-19995.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U5JUM7_9STRA6.690e-2434.75Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4AI34_9STRA3.380e-2335.29Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4EJ41_9STRA7.110e-2335.29Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3PXT7_9STRA5.310e-1631.52Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
M2VYP9_GALSU1.220e-628.16Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A3B1CQW6_9ZZZZ1.720e-628.03Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A1J5KF47_9PROT8.610e-628.23Uncharacterized protein n=1 Tax=Bacteriovorax sp. ... [more]
T0RXI7_9PROT1.160e-523.77Phosphatidate cytidylyltransferase-like protein n=... [more]
A0A4Z0KZ61_9PROT7.130e-531.93Uncharacterized protein n=2 Tax=Halobacteriovorax ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig174contigEcto-sp13_S_contig174:3862..8064 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score566.6
Seed ortholog evalue6.9e-159
Seed eggNOG ortholog2880.D8LS95
Model size1491
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG OGs2E1KA@1,2S8X1@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_004350.1
Cds size912
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig174.5204.1prot_Ecto-sp13_S_contig174.5204.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig174 3971..7594 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462907.575849-UTR-Ecto-sp13_S_contig174:3861..39701681462907.575849-UTR-Ecto-sp13_S_contig174:3861..3970Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig174 3862..3970 +
1681462907.619365-UTR-Ecto-sp13_S_contig174:7594..80641681462907.619365-UTR-Ecto-sp13_S_contig174:7594..8064Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig174 7595..8064 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462907.586102-CDS-Ecto-sp13_S_contig174:3970..41561681462907.586102-CDS-Ecto-sp13_S_contig174:3970..4156Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 3971..4156 +
1681462907.594789-CDS-Ecto-sp13_S_contig174:5493..56991681462907.594789-CDS-Ecto-sp13_S_contig174:5493..5699Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 5494..5699 +
1681462907.6030684-CDS-Ecto-sp13_S_contig174:5965..60191681462907.6030684-CDS-Ecto-sp13_S_contig174:5965..6019Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 5966..6019 +
1681462907.6112435-CDS-Ecto-sp13_S_contig174:7128..75941681462907.6112435-CDS-Ecto-sp13_S_contig174:7128..7594Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 7129..7594 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig174.5204.1

>prot_Ecto-sp13_S_contig174.5204.1 ID=prot_Ecto-sp13_S_contig174.5204.1|Name=mRNA_Ecto-sp13_S_contig174.5204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
MLRLGSAAIVFTMLCALSGIATGSPALTSQRQWTGTRLHGVPVLPLEQGA
RGGAGQDGVPKELGAGLRPRESYHLSRKTFHFSTIMAFAVVYSAKLTQRD
FARGMAALDACVLAGELARLRMDVVNRALFRVFGAFMRAHELKKFSGIMY
CLAGLGITSAMFPKHIALLGMFQLALGDPVAALCGHATRSVAWSRVRTGK
GLLGALGCATALTLANSFVLAKATFESGAPTLRRIVLAGGMIAAWAAAVE
VSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPW
LFG*
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mRNA from alignment at Ecto-sp13_S_contig174:3862..8064+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig174.5204.1 ID=mRNA_Ecto-sp13_S_contig174.5204.1|Name=mRNA_Ecto-sp13_S_contig174.5204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4203bp|location=Sequence derived from alignment at Ecto-sp13_S_contig174:3862..8064+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTTGATTGTTGGTGGCAAAGCCAAGCTTTCTCACGAAGGTATTGTCTAGT AGAACCAGGTACCGGTGGTTACAAGCACACGGAGTGTATAGGTTTACGGG CTGCGCACCATGTTGAGGTTGGGGTCTGCGGCCATCGTCTTCACCATGCT CTGCGCTTTGAGCGGTATCGCCACGGGCAGTCCCGCTCTTACGTCCCAGC GGCAGTGGACAGGTACACGGTTGCATGGAGTGCCAGTGCTACCGCTTGAA CAGGGAGCACGTGGTGGAGCGGGTCAAGACGGTGTCCCGAAAGAGGTATA ACTTATTGCACCAACCAATGGGTTGTGTTAGGCCCAACAAAATGTACCGC CGAAGGTCGCATAAGATACCACACTCCCTTGACCGAAGGTCAACGCTCGA TTGATTGCTGCACGGGACGAGGAGGGAGAAGGATGTTAAGGAAAATGAGA ATTGCCTATCAAATCGTGTTTTTTCGTTTTTCCGAAATGCTCTTGACGAG ACTGCTGGTTCAACATTTCAACGCCGGCATTTTTCCGGCGCCATCACTGC TGTTGTTGGTGTGCATATTATTTGGTTGAACCGTCATTGCGATGCGGATG AATTGCTTCACCTGCTCACCCGCATGCAACTCCTGGATGTAGTGCGTACA ATACCAGTAGGCAGACGATGGTTGATCGTTGAACTGGTGAAGTAACTTGG TACGATGACGGTTAACTATTGAACTAAAGCAACGGTGGTAGCACGTTCCG TTGATTGCGATTTCTCCCTGGATTTTTTTTCTCAGTTAGCTGCTACCTCC GAGTACACCTGACATCGCCATCACCATTCACAAGTCTCGTTGAGTAGTCA CACGTCGTTCAGTTCGAGAGGGATGAAAAATATTTCAACAGAACGACTTG CCCCGGTTGCAAGATTTGGCTTTCATTGCAACCTTTGCAAGCTCACCACG GTGATTTAACTCAATTCTGATTGTACGTGGCGAATGAGGACCCACCTGGC CCAGAGGAAACGATGAAAACACGAAACTACCATGTCAGGCTCCGCTTGGG TTTGTTTCTGATGTACGCCAAAAAACTGAAGGGCTCAGAATCGACATCTA TGCTGTTGCGTACATGGGAGGGGCACGTGGGAAAAGGTGTTAAGCACCAA CTGTAGGCACGCGCACTATCAAGGCTTGGTACCCCACCCCCCACCCCCCC ACCCCCCGCAACCAGCAATCAAAGTATTTCGCGAACCGTTGCCGTGTTTC TTTGCCATCGGCAGCGGAGTGCCTTTTTTTGGAACCAACATTTAAATGTG AAGACACCACAACAACGTAGCGTAGGTCGCCCGCCGAGCAGTTCGACTTG TGACTTAGGCGATTGTCATCGTCCGGGTCTACTTGCGGGTATCGATGGCA CTGCTTGCTGGGAGTACCCGTCGCACTACTCTCAGAACTCTACAACAAGC AGCATTCAGGACATGCCCGTCCTTCGTCTTCGTTGTTGTGTGTCCCTTGA AGCGAGAGAGCTATACGGCGCGTTACGAAAACGTCACTGTCTCAAGCACT GATCAATCAGAAGGCAAGCAGCAGGGACATTCAGACTGACAGCGCGCCGC CGTCGCGTTGCCTCGGCGTTCGATCGCGGCAGCTAGGGGCAGGGCTACGC CCTCGAGAGTCGTACCATCTGTCCCGCAAGACTTTCCACTTCTCGACCAT CATGGCGTTCGCGGTCGTCTACAGCGCCAAGCTCACGCAGAGGGACTTCG CGAGAGGCATGGCGGCTTTAGATGCGTGCGTGCTCGCGGGCGAACTGGCC AGGCTGCGAATGGACGTGGTCAACAGAGCCTTGTTTCGGTGAGGGTGCGG TGCGTGGCTTGGCAACTACCATACAGCTGCAAGCTTTTGTTTCCCCTGAG GACTTAACTTTTGCGGCAAGTATTGAACGGGGATGCCTTTCCTTCGGTGT CGCCCATTGATGCAATCGCCACTGCCGTGCTGCGCATGTGGGGGTGTGCC TTGGCGGACCGATTTCGCAGCAAGCACCTACGTACTTATGTGCAAGTGCT GAGATTGCATGCGCTCTGCCACCCCAATTCCTCGCTATCCGCCCTGCATC GCAGGGTGTTCGGTGCTTTCATGCGGGCTCATGAGCTCAAGAAGTTCAGC GGAATCATGTAAGCGATGATCGAGCCATTTTTAGTTGGAATGGTGTCCTT TTTGGGGTGGGTACATTGATTGGAGGGCCGTGAACTCGACGAGCACAGGG GTCCCAAAAACTAAATTCCAGTTTAAGACCGGACGGCGTTGCCTATGTGG GTGTTTCCCTGTACTATTATTGCATTGTTGGATTTCACGTGTACTGCACG CTGTACCTGCAGTGTCACGGTAGGTGAGCATGGCAAACATCCTTGCGCGT GTGTGATCACCTGTGCCTTACGGAGAAATTGCTTCTCGTCTTCAATATGC GCTTGTCGGCTGCTGAGGATGCAGGTCGCATCGCTGCGTACGTGGCGTTG TGCGGATCCCAACTAGCCCAACCACCATTGCTCTGCCGCACAATCGTAAT GCTTTAGGTAGAAACGGCGGAGCCTCCACCCCCACCTCGCAAGAGGGCAC GTGACGTGGATTGAAATACCGGAATCACTTCCCCCGCACCATTTTTTCGG GAGCTTAATCCGGTTTGTTCAAGGCACTCATTGCACAGGACTTCGTTTGA TTGTCGTAAAGTGGGTATGTTCCATTTTGTGTTTCCTTTCGTGTAGAAGT TTATAAATCCATACCATCATGGAGAGGTAGGAAAATGTACACCGTACATC CTACACAATACAACATCATACATAGGTTGCACCAGTCCACACTACTATCC TACATGCAATGTGACAACAGTCTAAAACCTACATAGTAAGAGGTGTAAAG GTTTATGACATAGCGTCAGGGGTACAACAGGTTTGTGTATGACCATGCTA CATACATCCTAAACAAAATACTGTAGACATGCCCCACCCCCACCCCTTCT CTCAATTTGGTCCTTAATCCGCGTGCCCTCTGACACCTCGGCAGATGCCC CCATCTACAAAACGTAGAACTTGCGAACGGTTTTGGCCCGTGTCATTCGA GTGAATAGTCGAGAGTCCACATCGTTCTTTTCGGTTGCAGCGCATTGCTC GCACGCACAGGTAGAGGGCTGTAGCAGCTTCAAACAAGGGTTTTGTGACA TGATGTCTTGATCCCGCCGCCTCGAAACCTTGCTCCGCCTCGCCTGTAAC GCGCACGGCATCCTCAGGTACTGCCTTGCAGGTCTCGGGATAACCTCGGC GATGTTCCCGAAGCACATCGCCCTGCTGGGAATGTTCCAACTCGCCCTCG GCGACCCCGTGGCCGCGCTCTGCGGACACGCCACTCGGTCCGTCGCTTGG TCTCGAGTGAGGACCGGCAAGGGCCTCCTAGGGGCTCTCGGCTGCGCGAC GGCGCTAACGCTAGCCAATTCCTTCGTGCTGGCCAAGGCGACGTTCGAGT CAGGGGCGCCGACGCTCCGCCGAATCGTTCTGGCCGGTGGGATGATCGCG GCGTGGGCGGCGGCGGTGGAGGTGAGCGTCCCGAGCCCCCAGAAGACGCT CCCCTGTGAAGGCTTCCCGCTGGCGTTCGACGACAACGCGGCGCTGCCGG TGCTGGGCGCGATGGGCGCGGCGGTGGTGTTTCGTGTGCTCGGGCTAGGG AGCTGCGAGCTGCGACCATGGCTGTTTGGTTGAGTTCTTGGGGTATTTTT TAATAGTGTTCGTGGATAGGACTGGAAGAAAGAGCGGGTTGCCTTGTTGA ATCTGTGCGGGCGCGTCGTGGGTAGGTACAACATAAAATTTTAGACAAGT TAGGGTGGAAATTTTCAGGTTTTGAACTTCATCGTCTGGTGCCGCCGTCC GAAACGGGGCGAATGAAAAACGTTCGAGTACTGTCTGTTTGTCGGGACAG CATTCCCCCGCCTGCACGTACATGTGGGTGTTTTTCGTGTTTGACCTGCT CCTCAAGGAAGGATGCTCGGCTCTCTCGCGCTTGCGTTTCGCGTGGTCTT CAGACCAAACAACTTTGCCCCCGGATCGTCTAGGCCTTGTAAAGCCATGC TTTTCACCGCAGCGGCTGGATTGTTTCGGCACCGACTCGCTTTTTTTACA ATCGCACGCAAGGTTATGTTGAAGGGCGACACAGTTTTCGATCCGGCGAC GAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig174:3862..8064+

>mRNA_Ecto-sp13_S_contig174.5204.1 ID=mRNA_Ecto-sp13_S_contig174.5204.1|Name=mRNA_Ecto-sp13_S_contig174.5204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig174:3862..8064+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGAGGTTGGGGTCTGCGGCCATCGTCTTCACCATGCTCTGCGCTTT
GAGCGGTATCGCCACGGGCAGTCCCGCTCTTACGTCCCAGCGGCAGTGGA
CAGGTACACGGTTGCATGGAGTGCCAGTGCTACCGCTTGAACAGGGAGCA
CGTGGTGGAGCGGGTCAAGACGGTGTCCCGAAAGAGCTAGGGGCAGGGCT
ACGCCCTCGAGAGTCGTACCATCTGTCCCGCAAGACTTTCCACTTCTCGA
CCATCATGGCGTTCGCGGTCGTCTACAGCGCCAAGCTCACGCAGAGGGAC
TTCGCGAGAGGCATGGCGGCTTTAGATGCGTGCGTGCTCGCGGGCGAACT
GGCCAGGCTGCGAATGGACGTGGTCAACAGAGCCTTGTTTCGGGTGTTCG
GTGCTTTCATGCGGGCTCATGAGCTCAAGAAGTTCAGCGGAATCATGTAC
TGCCTTGCAGGTCTCGGGATAACCTCGGCGATGTTCCCGAAGCACATCGC
CCTGCTGGGAATGTTCCAACTCGCCCTCGGCGACCCCGTGGCCGCGCTCT
GCGGACACGCCACTCGGTCCGTCGCTTGGTCTCGAGTGAGGACCGGCAAG
GGCCTCCTAGGGGCTCTCGGCTGCGCGACGGCGCTAACGCTAGCCAATTC
CTTCGTGCTGGCCAAGGCGACGTTCGAGTCAGGGGCGCCGACGCTCCGCC
GAATCGTTCTGGCCGGTGGGATGATCGCGGCGTGGGCGGCGGCGGTGGAG
GTGAGCGTCCCGAGCCCCCAGAAGACGCTCCCCTGTGAAGGCTTCCCGCT
GGCGTTCGACGACAACGCGGCGCTGCCGGTGCTGGGCGCGATGGGCGCGG
CGGTGGTGTTTCGTGTGCTCGGGCTAGGGAGCTGCGAGCTGCGACCATGG
CTGTTTGGTTGA
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