mRNA_Ecto-sp13_S_contig174.5203.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: D8LS94_ECTSI (Stress kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS94_ECTSI) HSP 1 Score: 574 bits (1480), Expect = 4.260e-206 Identity = 284/300 (94.67%), Postives = 288/300 (96.00%), Query Frame = 1
Query: 1 MRDVAPQASPVFPKPVYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSRLIQTQFGGAVQTVYEATPFDPKEEDQDERSVIIFGGKLLRYCPSCPLALKTNRISMLKLEAQWQRCAMGELVGEDPAKEIASLQLLQGGDESASXXXXXXXXGHRGVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVAKPIFSQILDAVSFVHSKGNRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIAKGKNLDVVLQGWKLRDAISDEAVDLLQ 900
MRD+APQASPVFPKPVYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSR IQTQFGGAVQTVYEATPFDPKEEDQDERSVIIFGGKLLRYCPSCPLALKTNRIS+LKLEAQWQRCAMGELVGEDP KEIASLQLLQGGDE A+ GH GVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVAKPIFSQILDAVSFVHSKGNRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIA+GKNLDVVLQGWKLRDAISDEAVDLLQ
Sbjct: 1 MRDMAPQASPVFPKPVYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSRFIQTQFGGAVQTVYEATPFDPKEEDQDERSVIIFGGKLLRYCPSCPLALKTNRISVLKLEAQWQRCAMGELVGEDPVKEIASLQLLQGGDELAASAAGAAGGGHDGVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVAKPIFSQILDAVSFVHSKGNRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIAEGKNLDVVLQGWKLRDAISDEAVDLLQ 300
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: A0A6H5L501_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L501_9PHAE) HSP 1 Score: 511 bits (1315), Expect = 4.630e-179 Identity = 286/423 (67.61%), Postives = 292/423 (69.03%), Query Frame = 1
Query: 1 MRDVAPQASPVFPKPVYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSRLIQTQFGGAVQTVYEATPFDPKEEDQDERSVIIFGGKLLRYCPSCPLALKTNRISMLKLEAQWQRCAMGELVGEDPAKEIASLQLLQGGDESASXXXXXXXXGHRGVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVAKPIFSQILDAVSFVHSKG---------------------------------------------------------------------------------------------------------------------------NRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIAKGKNLDVVLQGWKLRDAISDEAVDLLQ 900
MRD+APQASPVFPKP+YSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSR IQTQFGGAVQTVYEATPFDPKEEDQDERS+IIFGGKLLRYCPSCPLALKTNRIS+LKLEAQWQRCAMGELVGEDP KEIASLQLLQG DES XXXXXXXX GVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVA+PIFSQILDAVSFVHSKG NRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIA+GKNLDVVLQGWKLRDAISDEAVDLLQ
Sbjct: 1 MRDMAPQASPVFPKPIYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSRSIQTQFGGAVQTVYEATPFDPKEEDQDERSMIIFGGKLLRYCPSCPLALKTNRISVLKLEAQWQRCAMGELVGEDPVKEIASLQLLQGDDESTXXXXXXXXXXXXGVEELIEALADDTTLYKISPWYSGGELFDLAPMSEDVARPIFSQILDAVSFVHSKGVCHRDISLENILMDTSSVSKRACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPQGGSCTAERRKTTDVEGEWFGTPRLCDFGMSVRIPTSPATGNRAPLTPQGRCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFKFQAIAEGKNLDVVLQGWKLRDAISDEAVDLLQ 423
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: A2DTF0_TRIVA (CAMK family protein kinase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DTF0_TRIVA) HSP 1 Score: 77.8 bits (190), Expect = 1.680e-12 Identity = 56/181 (30.94%), Postives = 79/181 (43.65%), Query Frame = 1
Query: 457 HRGVEELIEALADDTTLYKISPWYSGGELF----DLAPMSEDVAKPIFSQILDAVSFVHSKG-NRAPLTPQ-------GR---------------------CGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFK-FQAIAKGKNLDVVLQGWKLRDAISDEAVDLL 897
H G+ EL + L DD Y I + GELF D +SED AKP+F QIL+A+ +VHS G + L P+ GR CG +PE Q +DG D WS G L+ L G PW++ + F+ I G + + D +S +A ++L
Sbjct: 72 HPGIVELCDLLKDDNNYYVIMEFCPNGELFQFIVDRNNLSEDEAKPLFRQILEALQYVHSHGVSHRDLKPENLLIDNLGRIKISDFGLSIFVDSQGLVKTPCGSPCYASPECISGQLYDGMTTDVWSAGVILYAMLTGQLPWKKRNQAQLFKQIKSGD--------YTIPDELSSDATNML 244
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: X6MWJ2_RETFI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MWJ2_RETFI) HSP 1 Score: 73.9 bits (180), Expect = 2.300e-11 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 658 RCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWE--EVGDFKFQAIAKGKNLDVVLQGWKLRDAISDEAVDLL 897
+CGK+ C+APEV+ ++++D DTWSVG LFM LLG+ PW + F+ I+ G+ DV++ K R +S+EA+DLL
Sbjct: 220 KCGKTRCMAPEVYRNKSYDARKADTWSVGVMLFMMLLGIPPWAAPHESEMIFRMISVGRLRDVIIFN-KKRKLVSNEALDLL 300
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: V7CB12_PHAVU (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7CB12_PHAVU) HSP 1 Score: 73.9 bits (180), Expect = 3.980e-11 Identity = 59/196 (30.10%), Postives = 85/196 (43.37%), Query Frame = 1
Query: 379 KEIASLQLLQGGDESASXXXXXXXXGHRGVEELIEALADDTTLYKISPWYSGGELFDL----APMSEDVAKPIFSQILDAVSFVHSKG--------------NRAPLT---------PQG---------RCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVGDFK-FQAIAKGKNLDVVLQGW 855
+EIA+L+LL+ H V L E LA T +Y + + +GGELFD+ A SE + +F Q++D +S+ HSKG N+ L PQ CG VAPEV ++ +DG D WS G L++ L G P+++ +Q I KG DV + W
Sbjct: 85 REIATLKLLR----------------HPNVVRLNEVLASKTRIYMVLEYVNGGELFDIIASKAKRSEGEGRKLFQQLIDGLSYCHSKGVFHRDLKLENVLVDNKGNLKITDFGLSALPQHLREDGLLHTTCGSPNYVAPEVLANKGYDGATSDAWSCGVLLYVILTGCLPFDDRNMVVLYQKIFKG---DVQIPKW 261
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: UPI001929ADD4 (LOW QUALITY PROTEIN: CBL-interacting protein kinase 21-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929ADD4) HSP 1 Score: 71.6 bits (174), Expect = 2.260e-10 Identity = 50/179 (27.93%), Postives = 74/179 (41.34%), Query Frame = 1
Query: 361 VGEDPAKEIASLQLLQGGDESASXXXXXXXXGHRGVEELIEALADDTTLYKISPWYSGGELFDLAPM----SEDVAKPIFSQILDAVSFVHSKG-NRAPLTPQG-------------------------------RCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEE 789
+ E +EI +L+LL+ H V L E L T +Y + + GGELFD + SE+ A+ +F Q++DAVS+ H KG L P+ CG VAPEV ++ +DG D WS G L++ L G P+++
Sbjct: 47 IDEQIKREIGTLKLLK----------------HPNVVRLYEVLGSKTKIYMVLEYVKGGELFDKIALNDKLSENEARKLFQQLIDAVSYCHEKGVYHRDLKPENLLLDEEGNLKISDFGLSALPQQFGNDGLLHTTCGSPNYVAPEVIANKGYDGAKSDIWSCGVILYVMLTGCLPFDD 209
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: A0A4Y7IMW1_PAPSO (Non-specific serine/threonine protein kinase n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IMW1_PAPSO) HSP 1 Score: 71.6 bits (174), Expect = 2.320e-10 Identity = 54/193 (27.98%), Postives = 79/193 (40.93%), Query Frame = 1
Query: 361 VGEDPAKEIASLQLLQGGDESASXXXXXXXXGHRGVEELIEALADDTTLYKISPWYSGGELFDLAP----MSEDVAKPIFSQILDAVSFVHSKG----------------NRAPLTPQG----------------RCGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEEVG-DFKFQAIAKGK 828
V + EI +L+LL+ H V L E LA T +Y + + GGELFD +SE V + +F Q++D VS+ HSKG +T G CG VAPE+ ++ +DG D WS G L++ L G P+++ +Q I KG+
Sbjct: 56 VNDQIKNEIGTLKLLK----------------HPNVVRLHEVLASKTKIYMVLEYVGGGELFDRIATKGRVSEAVGRQLFQQLIDGVSYCHSKGVYHRDLKLENVLVDVKGNVKITDFGLSALPKHFREDGLLHTTCGSPNYVAPEILANRGYDGATSDVWSCGVILYVTLCGYLPFDDRNLAVLYQKIFKGE 232
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: A0A7N2LVJ5_QUELO (Non-specific serine/threonine protein kinase n=4 Tax=Fagaceae TaxID=3503 RepID=A0A7N2LVJ5_QUELO) HSP 1 Score: 70.5 bits (171), Expect = 5.650e-10 Identity = 47/179 (26.26%), Postives = 76/179 (42.46%), Query Frame = 1
Query: 361 VGEDPAKEIASLQLLQGGDESASXXXXXXXXGHRGVEELIEALADDTTLYKISPWYSGGELFDL----APMSEDVAKPIFSQILDAVSFVHSKG--------NRAPLTPQGR------------------------CGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEE 789
+ + +EIA+L++L+ H V L E LA T +Y + + +GGELFD + ED + +F Q++DAVS+ H+KG + +G CG VAPE+ ++ +DG D WS G L++ L G P+++
Sbjct: 60 ISDQIKREIATLKVLK----------------HPNVVRLHEVLASKTKIYMVLEYVTGGELFDRIASKGKLKEDEGRKLFQQLIDAVSYCHTKGVFHRDLKLENVLVDAKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEILANRGYDGATSDIWSCGVILYVILTGYLPFDD 222
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: A0A0K0FE06_STRVS (Protein kinase domain-containing protein n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0FE06_STRVS) HSP 1 Score: 68.9 bits (167), Expect = 2.170e-9 Identity = 50/159 (31.45%), Postives = 71/159 (44.65%), Query Frame = 1
Query: 457 HRGVEELIEALADDTTLYKISPWYSGGELFDLA----PMSEDVAKPIFSQILDAVSFVHSKG----------------NRAPLTPQGR-------------CGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPW--EEVGDFKFQAIAKGK 828
H V L E + + Y I + GGEL++ + EDVAKPIF+Q++ AV+ +HSK L G CG APE+F DQ + G +D W++G L+ L+GV P+ + V D K Q I KG+
Sbjct: 270 HPNVIRLFECVETLSKTYLIMEYAGGGELYNYVHTKGKLLEDVAKPIFAQLISAVAHMHSKNVIHRDIKAENVIFSQPGWVKLADFGFSCKIQENVMLKTFCGSPPYAAPELFKDQEYYGPGVDVWALGVLLYFMLVGVTPFRGDTVSDLK-QTILKGQ 427
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Match: A0A6A6MDN9_HEVBR (Non-specific serine/threonine protein kinase n=3 Tax=Magnoliopsida TaxID=3398 RepID=A0A6A6MDN9_HEVBR) HSP 1 Score: 68.9 bits (167), Expect = 2.210e-9 Identity = 54/202 (26.73%), Postives = 82/202 (40.59%), Query Frame = 1
Query: 292 LKTNRISMLKLEAQWQRCAMGELVGEDPAKEIASLQLLQGGDESASXXXXXXXXGHRGVEELIEALADDTTLYKISPWYSGGELFDL----APMSEDVAKPIFSQILDAVSFVHSKG--------NRAPLTPQGR------------------------CGKSTCVAPEVFYDQAFDGHAIDTWSVGTTLFMALLGVQPWEE 789
L+ NRI L + Q +R EIA+L+LL+ H V L E LA + +Y + + +GGELFD +SE + +F Q++D VS+ HSKG + +G CG VAPE+ ++ +DG D WS G L++ L G P+++
Sbjct: 37 LEKNRIIHLNITDQIKR-------------EIATLKLLK----------------HPNVVRLYEVLASKSKIYMVLEYVNGGELFDRIASKGKLSEAQGRKLFQQLIDGVSYCHSKGVFHRDLKLENVLVDAKGNIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEILSNRGYDGATSDIWSCGVILYVILTGYLPFDD 209 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig174.5203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig174.5203.1 >prot_Ecto-sp13_S_contig174.5203.1 ID=prot_Ecto-sp13_S_contig174.5203.1|Name=mRNA_Ecto-sp13_S_contig174.5203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp MRDVAPQASPVFPKPVYSRAVVSNEPGVGSLLVSQTSARQFFCPAKDSRLback to top mRNA from alignment at Ecto-sp13_S_contig174:76..3440- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig174.5203.1 ID=mRNA_Ecto-sp13_S_contig174.5203.1|Name=mRNA_Ecto-sp13_S_contig174.5203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3365bp|location=Sequence derived from alignment at Ecto-sp13_S_contig174:76..3440- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig174:76..3440- >mRNA_Ecto-sp13_S_contig174.5203.1 ID=mRNA_Ecto-sp13_S_contig174.5203.1|Name=mRNA_Ecto-sp13_S_contig174.5203.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp13_S_contig174:76..3440- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |