mRNA_Ecto-sp13_S_contig17395.5201.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: D8LDM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM2_ECTSI) HSP 1 Score: 293 bits (749), Expect = 9.040e-91 Identity = 156/219 (71.23%), Postives = 183/219 (83.56%), Query Frame = 1
Query: 280 TRFGNLDDCPPSSRGKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPDLSDL 936
T FGNLDD PPSS G+GVDV+KLQ AINC DR SNSILGVLEDVS+RGDT +R GLAEVVSE+S AL RRS DWVASASELEHF++ N ERAEATFSQYS+ LR KI+RET +++ GKNIS +RS G G PTVAVV LV+ALRGDA++RLGLD++V S+ISG K+ALQ I+SGSLSD G ++LAAEVLWTPEEPWE L++EDA+ DFP+L DL
Sbjct: 195 TSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSLDWVASASELEHFNNRNVERAEATFSQYSIQLRTKIERETNAVIGGKNISAERSG--GGGIGSGGPTVAVVSLVVALRGDAMKRLGLDRSV-SNISGLKTALQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 410
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.690e-45 Identity = 91/212 (42.92%), Postives = 140/212 (66.04%), Query Frame = 1
Query: 301 DCPPSSRGKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPDLSDL 936
D S G+GV V+KLQ A+N DR S IL L+ ++ R +T +R GL+ VSE+ AL RR DW+ASAS+ E+F + ERAEA F+ Y++ R K++RET S G+++S R + G+PT AVV +V+AL+G++L+R L++++NS+ S ++ L ++ + +D G ++L E+LWTPEEPWE+L ++ +EDFP+L DL
Sbjct: 189 DVEGGSLGRGVGVVKLQVALNASDRSSRGILAQLKSIAERAETSSRGGLSTAVSEVCLALVRRQPDWIASASQYEYFAPRSAERAEAVFNTYAIAERTKVERETVSRFGGEDLSDSRRSDGVRPEDLGKPTQAVVTIVLALKGESLKRFQLERSINSA-SALRNVLTQVAGDATTDDGENVLGVELLWTPEEPWESLDRQAVLEDFPELMDL 399
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: H6WBA9_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA9_VAULI) HSP 1 Score: 157 bits (396), Expect = 6.860e-40 Identity = 92/221 (41.63%), Postives = 135/221 (61.09%), Query Frame = 1
Query: 274 VRTRFGNLDDCPPSSRGKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPDLSDL 936
+ R+GN DD SS G GV V+KLQ ++C DR N +LG + +++ T GL+ + SE AL R S +W++++S+ E+FD N+ +AE+ F+ YSV R+K ++ET E S G PT AVV LV+A+ G+ L+ LDK+VNS +S K+AL ISS SL+D G ++LAAE++WTPE+ E L +E ++DFP+L DL
Sbjct: 129 TQNRWGNFDDDYFSSLGNGVSVLKLQICLDCKDRTENGVLGQIRNIA---QTSQNTGLSYMTSEACLALLRNSDNWISASSKFEYFDPRNSNKAESAFNAYSVAERSKFEKET--------------TENFSQNEIGVPTKAVVSLVLAINGETLRPFDLDKSVNS-VSALKNALSKISSDSLTDDGMNVLAAELIWTPEDAREVLDRESIIQDFPELMDL 331
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: A0A7S2XX02_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX02_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.120e-32 Identity = 87/210 (41.43%), Postives = 133/210 (63.33%), Query Frame = 1
Query: 283 RFGNLDDCP-PSSRGKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAM 909
++G LDD PSS G+GV V+K Q A+N DR + S+L L VS T +R GL+ VVSE++ L RRS++W A ASEL++F + +AE+ F + S R+K+++E+ V G ++ +++ G A G T+AVV + +ALRGD+L+ N++ + ++AL+AIS+ +D G ++LAAEVLWTPE P E LSK+D +
Sbjct: 177 QWGTLDDEEGPSSLGQGVSVLKFQLALNVKDRTAMSLLNDLRVVSESSSTSSRFGLSNVVSEVALTLLRRSAEWEAVASELQYFGPRDASKAESAFGRISTGERSKVQQES-GQVDGMSVGGFANQKVG--AGDGDATLAVVTIALALRGDSLKSFDGVNNISQA----QAALRAISADVATDGGENVLAAEVLWTPENPSEVLSKQDVI 379
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: L1J5N6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5N6_GUITC) HSP 1 Score: 120 bits (302), Expect = 5.630e-27 Identity = 77/215 (35.81%), Postives = 127/215 (59.07%), Query Frame = 1
Query: 292 NLDDCPPSSRGKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPDLSDL 936
N+ + R G+++ K+Q A+ C +RG NS+LG + ++ D+ ++ +A +VS++S AL RR DWV++A E + D E FSQ S RAK++RET +LV GK+ S RS E G+ T+AV+ +V+A+ G L + K++ K AL ++ + +L++ L+AAE+LW PEEPWE+L+ +D + ++P+L L
Sbjct: 103 NMFENARQGRTSGINIAKVQVAVCCDNRGPNSLLGTVARLARDCDSRSQRSMASLVSDVSLALLRREVDWVSAAVETKTVKDIT--EGENIFSQMSFTERAKVERETFNLVAGKDKSEARSSETKLEDI-GKSTMAVITMVVAMEGKKLPEIRDSKSL-------KEALMSLGTEALNE--DSLVAAELLWVPEEPWESLTADDVILEYPNLLSL 305
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: A0A7S4P475_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P475_GUITH) HSP 1 Score: 120 bits (302), Expect = 2.860e-26 Identity = 77/215 (35.81%), Postives = 127/215 (59.07%), Query Frame = 1
Query: 292 NLDDCPPSSRGKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPDLSDL 936
N+ + R G+++ K+Q A+ C +RG NS+LG + ++ D+ ++ +A +VS++S AL RR DWV++A E + D E FSQ S RAK++RET +LV GK+ S RS E G+ T+AV+ +V+A+ G L + K++ K AL ++ + +L++ L+AAE+LW PEEPWE+L+ +D + ++P+L L
Sbjct: 194 NMFENARQGRTSGINIAKVQVAVCCDNRGPNSLLGTVARLARDCDSRSQRSMASLVSDVSLALLRREVDWVSAAVETKTVKDIT--EGENIFSQMSFTERAKVERETFNLVAGKDKSEARSSETKLEDI-GKSTMAVITMVVAMEGKKLPEIRDSKSL-------KEALMSLGTEALNE--DSLVAAELLWVPEEPWESLTADDVILEYPNLLSL 396
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: A0A6U4YZC0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4YZC0_HEMAN) HSP 1 Score: 120 bits (300), Expect = 4.860e-26 Identity = 77/200 (38.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query: 325 KGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPD 924
+ + V K+Q A NC DRG NS+LGV+ ++ DT LA +VS+++ AL R+ DW+++ ++E D EATFSQ S+ RAKI+RET + VRG + S R E G G+ T AV+ L++ L+G + ++ S+S S GS LLAAEV+WTPEEPWE ++ ++ + D+PD
Sbjct: 199 EALSVCKVQVATNCPDRGPNSVLGVIARLADEVDTDDEDSLASMVSDVALALLRKEGDWISA--KIESVDXXXXXXXEATFSQMSLKERAKIERETINRVRGNDKSDAREGE-GKLEDIGKATSAVITLILCLQGRKIPEANDMASLRKSLS---------SVGSDVVGNDSLLAAEVMWTPEEPWETMTPDEVILDYPD 386
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: A0A7S0ECJ8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ECJ8_9CRYP) HSP 1 Score: 116 bits (291), Expect = 8.800e-25 Identity = 75/215 (34.88%), Postives = 124/215 (57.67%), Query Frame = 1
Query: 292 NLDDCPPSSRGKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPDLSDL 936
N+ + R G+++ K+Q A+ C +RG +S+LG +E ++ D+ ++ +A +VS++S AL RR DWV++A E + D E SQ S R K++RET +LV GK+ S R E G+ T+AV+ +V+A+ G L + K++ K AL ++ + +L + L+AAE+LW PEEPWE+L+ +D M ++P+L L
Sbjct: 196 NMFENARQGRTSGINIAKVQVAVCCDNRGPSSLLGTVERLARECDSRSQSSMANLVSDVSLALLRREVDWVSAAVETKTVTDIT--EGENICSQMSFKERMKVERETFNLVAGKDKSEARGSEAKLDDI-GKSTIAVITMVVAMEGKKLPEIRDSKSL-------KEALMSLGTEALHE--DTLVAAELLWVPEEPWESLTPDDIMLEYPNLLSL 398
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: L1I7G9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I7G9_GUITC) HSP 1 Score: 107 bits (266), Expect = 3.700e-22 Identity = 69/194 (35.57%), Postives = 109/194 (56.19%), Query Frame = 1
Query: 322 GKGVDVIKLQFAINCCDRGSNSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRPTVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKED 903
G ++V+KLQ A++C RG +S+LG + ++ DT T GLA++VS+++ AL R+ SDWV+++ E + D + E+ F Q+S+ RAKI+RET + V G + S RS EG G+ T AV+ +++A+ G L + K++ LLAAE++WTPEEPWE +E+
Sbjct: 73 GPEINVVKLQVAVHCDTRGPSSLLGTISRIADEADTETEEGLADLVSDVALALLRKESDWVSASLETKVTRDED--EGESLFGQFSLQERAKIERETFNKVSGIDKSESRS-SEGKLDDIGKATEAVITMILAIEGKELPSV---KDMK------------------------LLAAEIMWTPEEPWEVEEEEE 236
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Match: A0A7S4S3K8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S3K8_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.370e-20 Identity = 79/219 (36.07%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 289 GNLDDCPPSSRGKGVDVIKLQFAINCCDRGS-NSILGVLEDVSARGDTGTRLGLAEVVSEISFALGRRSSDWVASASELEHFDDPNTERAEATFSQYSVHLRAKIKRETKSLVRGKNISVQRSREEGSSAAPGRP--TVAVVCLVIALRGDALQRLGLDKNVNSSISGPKSALQAISSGSLSDAGHDLLAAEVLWTPEEPWEALSKEDAMEDFPDLSDL 936
G + S+ G GV V+KL A+N R NSIL VL+ +S++ T +R+G++ +VS++S L RR VA++S ++ DP +A+ F+ SV R+K ++ET S G + S + S + +S P T+AVV L++++ GD+ Q N+ S +S SAL I+S G L +AE+LWTPEE + LS D + D+PDL+ +
Sbjct: 277 GTMTASTNSALGNGVSVVKLSIAMNVPKRDDPNSILSVLDRLSSKAKTDSRVGVSNLVSQVSLELLRRKDSIVAASSSYKNVGDPI--KAQREFNNLSVKERSKFEKETISKYGGVDYSPRISADSSASYLKDAPQATMAVVTLLLSIDGDSTQV----PNIRS-VSDITSALSRIASDV--KVGECLRSAEILWTPEERSDTLSTRDIISDYPDLTTI 486 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17395.5201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17395.5201.1 >prot_Ecto-sp13_S_contig17395.5201.1 ID=prot_Ecto-sp13_S_contig17395.5201.1|Name=mRNA_Ecto-sp13_S_contig17395.5201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp MQCLIAVSLPARLCDYGRCDRNQRVRTRFGNLDDCPPSSRGKGVDVIKLQback to top mRNA from alignment at Ecto-sp13_S_contig17395:48..3093- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17395.5201.1 ID=mRNA_Ecto-sp13_S_contig17395.5201.1|Name=mRNA_Ecto-sp13_S_contig17395.5201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3046bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17395:48..3093- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17395:48..3093- >mRNA_Ecto-sp13_S_contig17395.5201.1 ID=mRNA_Ecto-sp13_S_contig17395.5201.1|Name=mRNA_Ecto-sp13_S_contig17395.5201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17395:48..3093- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |