mRNA_Ecto-sp13_S_contig17387.5198.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI) HSP 1 Score: 282 bits (722), Expect = 2.530e-85 Identity = 150/185 (81.08%), Postives = 150/185 (81.08%), Query Frame = 1
Query: 4 PRYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDKP 558
P YIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSA LFYLFEK DNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEED P
Sbjct: 1034 PWYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSAFLFYLFEK--------------------------------DNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTP 1186
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA) HSP 1 Score: 169 bits (427), Expect = 4.550e-45 Identity = 91/180 (50.56%), Postives = 110/180 (61.11%), Query Frame = 1
Query: 1 LPRYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTG--EAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVN 534
LP YI+ IL SAGV FDA FR+LRLFR+LQLE V+AF+LLDDVW +K L A GLLA +VWVGSA LF+L E+ N C G EAF IP +M+YT +FLGGEW IDFT G+++CC C+ GI LF IPVGTVFE+F V++E N
Sbjct: 1041 LPWYIQEILVSAGVVFDAGPFRILRLFRLLQLERHVNAFTLLDDVWRGAKGVLKAAGLLAFIVWVGSATLFFLTEQ--------------------------------RNECEGVREAFVDIPSSMYYTGIFLGGEWGLIDFTGLGRIVCCFTCIMGIALFAIPVGTVFESFSGVLEEAN 1188
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A7S0XQ15_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ15_HEMAN) HSP 1 Score: 150 bits (379), Expect = 1.670e-42 Identity = 85/185 (45.95%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 LPRYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDK 555
LP YIE G D + RVLRLFRILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F++ EK N G AF +IP++M+YTA+FL GEW ++DFT GKV+CCVL V GI L+ IPVG +F+AF +V+ E EEEE+ K
Sbjct: 50 LPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEK--------------------------------GNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAEQKEEEEKGK 202
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: K0S063_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S063_THAOC) HSP 1 Score: 157 bits (398), Expect = 3.590e-41 Identity = 87/187 (46.52%), Postives = 115/187 (61.50%), Query Frame = 1
Query: 1 LPRYIETILWSAGVYF--DASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKVL-----CLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEE 540
LP YIE +L S+G +A VFR LQLE FV AFS LD+V+ ASK L ATGL+AL++W+GS+ LF++FE C + G C+ F T A N + Y MC+ F+++P +FY AVFLGGEW +DFTW GK++C LCV GI L+ IPVGT+F++F V+ V EE
Sbjct: 1014 LPWYIEAVLASSGKLSGDEARVFRXXXXXXXLQLEDFVVAFSRLDNVYRASKGVLKATGLMALIIWIGSSALFFIFESDNPNFRECDGSVPLIGEGGSLGCYDFESTAACNAV-YPGMCSQTVFTNMPSTLFYVAVFLGGEWGVVDFTWRGKIVCIFLCVAGIALYSIPVGTLFDSFGAVIGLVEEE 1199
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A812X110_9DINO (Shal protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812X110_9DINO) HSP 1 Score: 157 bits (398), Expect = 3.840e-41 Identity = 79/182 (43.41%), Postives = 112/182 (61.54%), Query Frame = 1
Query: 4 PRYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEE 549
P +I+T++W +G+ F+A VFR+ RL RILQLE FV +F+LLDD W + ++T+ ATG +AL+VW+ A LFY FE+ DN AF +P +M++T +FLGGEW+ IDFT GK++C V CV GI L+GIP+G VFEAF DV+ + +E++E
Sbjct: 1701 PFWIQTVMWLSGLQFNAFVFRIARLLRILQLEDFVESFTLLDDAWRSCRETMVATGFMALLVWICGAVLFYEFEQ--------------------------------DNPAMDGAFKDLPSSMYFTIIFLGGEWAMIDFTSGGKIVCLVYCVVGIGLYGIPIGAVFEAFSDVLADKEDEQDE 1850
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A7S0FML1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FML1_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.080e-40 Identity = 85/194 (43.81%), Postives = 119/194 (61.34%), Query Frame = 1
Query: 4 PRYIETILWSAGVYFD---ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKV-----LCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDKPE 561
P Y+E IL +G+ A++FRV LQLE F+ F +D+V+ AS+D L ATGL+A+++WVG LF++FE+ C V + T + C+ F T A D MC +FSS+PD++FY AVFLGGEW +DFTW G+++C LCV GI L+ IPVGT+FE+F V+ EEEE++ E
Sbjct: 563 PWYVEQILLLSGIAESNDTATIFRVXXXXXXLQLEDFLVGFRKIDNVFRASRDVLKATGLMAVIIWVGCGALFFIFEQSNPNFRQC-DVSIPLRTKHDTGCYDFESTAACEAYYGDGMCVQSSFSSMPDSLFYVAVFLGGEWGLVDFTWGGRMVCMFLCVIGIALYAIPVGTLFESFGSVIGMDGEEEEDEDEE 755
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A7S2YGV7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YGV7_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.170e-40 Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 4 PRYIETILWSAGVYF----DASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFE------KVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 522
P ++E L +G+ +A +FR LQLE FV AFS LD+V+ ASKD L ATGLLAL++WVG LFY+FE + SV + C+ F T N Y +C+ AF +P+A++YTAVFLGGEW +DFTW G+++C LCV GI L+ IP+GT+F++F V+
Sbjct: 21 PWFVEQGLMMSGLLSQDDDNARIFRXXXXXXXLQLEDFVVAFSKLDNVFRASKDVLKATGLLALIIWVGCGALFYIFEENNPNWRECDSSVPLHTNDTGMPGCYDFKSTAECNEY-YPGLCSQNAFIHMPNALYYTAVFLGGEWGVVDFTWPGRLVCLFLCVVGIALYAIPIGTLFDSFGAVL 202
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A7S1DR60_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DR60_HEMAN) HSP 1 Score: 150 bits (379), Expect = 1.080e-39 Identity = 85/185 (45.95%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 LPRYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDK 555
LP YIE G D + RVLRLFRILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F++ EK N G AF +IP++M+YTA+FL GEW ++DFT GKV+CCVL V GI L+ IPVG +F+AF +V+ E EEEE+ K
Sbjct: 346 LPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEK--------------------------------GNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAEQKEEEEKGK 498
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A7S0YVY9_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YVY9_9CRYP) HSP 1 Score: 141 bits (355), Expect = 1.190e-39 Identity = 80/173 (46.24%), Postives = 102/173 (58.96%), Query Frame = 1
Query: 28 WSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEE 546
W V F A RVLRL RILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F+L E+ N G AF +IP++M+YTA+FL GEW ++DFT GKV+CCVL V GI L+ IPVG +F+AF +V+ E EEEE
Sbjct: 3 WGRPVGFAAV--RVLRLLRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFLTER--------------------------------GNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAEQKEEEE 141
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Match: A0A7S1VPC1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.740e-39 Identity = 84/183 (45.90%), Postives = 114/183 (62.30%), Query Frame = 1
Query: 4 PRYIETILWSAGVYFDAS----VFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFE------KVLCLSVLVAAGTAVRSSCFSFSKTFAVNRICYDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 522
P +IE L +GV + VFRV LQLE FV AFS+LD+V+ ASKD ATGLLA+++WVG A LFY+FE + SV C+ F T A N + YD +C +AF++IP+A+++TAVFLGGEW IDFTW G+ +C LCV GI L+ IP+GT+F++F ++
Sbjct: 1073 PWFIEQALIHSGVISEGGDSVMVFRVXXXXXXLQLEDFVVAFSMLDNVFRASKDVFKATGLLAVIIWVGCAALFYIFEENNPNWRSCDSSVPAHTEDPDFPGCYDFPSTSACNEV-YDGLCEQKAFTNIPNALYFTAVFLGGEWGVIDFTWPGRFVCLFLCVAGIGLYAIPIGTLFDSFGAIL 1254 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17387.5198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17387.5198.1 >prot_Ecto-sp13_S_contig17387.5198.1 ID=prot_Ecto-sp13_S_contig17387.5198.1|Name=mRNA_Ecto-sp13_S_contig17387.5198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp LPRYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKback to top mRNA from alignment at Ecto-sp13_S_contig17387:657..1942- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17387.5198.1 ID=mRNA_Ecto-sp13_S_contig17387.5198.1|Name=mRNA_Ecto-sp13_S_contig17387.5198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1286bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17387:657..1942- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17387:657..1942- >mRNA_Ecto-sp13_S_contig17387.5198.1 ID=mRNA_Ecto-sp13_S_contig17387.5198.1|Name=mRNA_Ecto-sp13_S_contig17387.5198.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=567bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17387:657..1942- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |