mRNA_Ecto-sp13_S_contig1738.5194.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1738.5194.1
Unique NamemRNA_Ecto-sp13_S_contig1738.5194.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE)

HSP 1 Score: 554 bits (1428), Expect = 1.350e-171
Identity = 347/371 (93.53%), Postives = 349/371 (94.07%), Query Frame = 3 
Query:    3 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFRTMPSGR----PSNKNSVSSIKSINETSSVVFPEDSDKGARGVEISTGTSILSTVRRHLRASERISSSTSVASALARGKVSREVLEEVFGQSLLGVVEAARKKEEQLSATVRKRLQSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETILAEMGVLPSAIVLLD 1103
            CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAK GLVSPAAASPA+SFRTMPSGR    PS KNSVSSIKSINETSSVVFPEDSDKGARGVEISTGTSILSTVRRHLR SERI S+TSVASALA GKVSREVLEEVFG SLLGVVEAARKKEEQLS TVRKRLQSLA XXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXX VFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETIL EMGVLPSAIVLLD
Sbjct: 1523 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKTGLVSPAAASPASSFRTMPSGRRVRVPSGKNSVSSIKSINETSSVVFPEDSDKGARGVEISTGTSILSTVRRHLRTSERIPSNTSVASALAHGKVSREVLEEVFGPSLLGVVEAARKKEEQLSDTVRKRLQSLARXXXXXXXXXXXXXXXXXXXXXXKKYGDVGDXXXXXXXXXX-VFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETILTEMGVLPSAIVLLD 1892
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 5.650e-163
Identity = 331/374 (88.50%), Postives = 334/374 (89.30%), Query Frame = 3 
Query:    3 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQ-------AKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFRTMPSGRPSNKNSVSSIKSINETSSVVFPEDSDKGARGVEISTGTSILSTVRRHLRASERISSSTSVASALARGKVSREVLEEVFGQSLLGVVEAARKKEEQLSATVRKRLQSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETILAEMGVLPSAIVLLD 1103
            CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQ       AKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFRTMPSGRPSNKNSVSSIKSINETSS VFPEDS+K  RGVEISTGTSILSTVRRHLR SERI S+TSVA ALARGKVSREVLEEVFG SLLGVVEAARK                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        VFADFLAD+LAGSGDTPGKLQVVVSGPSGFVFYVETIL EMGVLPSAIVLLD
Sbjct:  833 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQYDRRLCEAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFRTMPSGRPSNKNSVSSIKSINETSSAVFPEDSEKEGRGVEISTGTSILSTVRRHLRTSERIPSNTSVAGALARGKVSREVLEEVFGPSLLGVVEAARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------VFADFLADDLAGSGDTPGKLQVVVSGPSGFVFYVETILTEMGVLPSAIVLLD 1198
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 1.400e-94
Identity = 228/368 (61.96%), Postives = 264/368 (71.74%), Query Frame = 3 
Query:    3 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFRTMPSGRPSNKNSVSSIKSINETSSVVFPEDSDKGARGVEISTGTSILS-TVRRHLRASERISSSTSVASALARGKVSREVLEEVFGQSLLGVVEAARKKEEQLSATVRKRLQSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETILAEMGVLPSAIVLLD 1103
            CIEMRIRLY DGAMSKLLE LAKD+DNP V+LQ PFVIQKLVPPPAHRNV+MIAAGTGINPMVQQIRDYLALP+  AQSS+SRLALVWQATSEADL+G++E+  +Q KS+GLLEV +LISG+HRKRNIPGAAFRKGA   L KAGL+SP+ ++P+NS R    GRPS + S+ +I    E    VF      G   V  +T TS  + T+     + ER  SST V   L RGKVSREVL+EVFG +LLG++EAAR K+E   +  R+R +     XXXXXXXXXXXXXXXXXXXX                         LADELAGS  TPG+LQVVVSGP+GFV  VETIL EMG+  SAIVLLD
Sbjct: 1284 CIEMRIRLYTDGAMSKLLENLAKDSDNPTVRLQAPFVIQKLVPPPAHRNVMMIAAGTGINPMVQQIRDYLALPKSGAQSSKSRLALVWQATSEADLFGADEIAAMQEKSDGLLEVVMLISGQHRKRNIPGAAFRKGAETFLKKAGLISPSVSAPSNSIRHWTPGRPSRELSMGTIS---EAKPGVFVS----GRSVVRDNTSTSASTKTIATRASSIERRMSST-VVGTLTRGKVSREVLDEVFGPNLLGIMEAARTKDEDSPSMDRRRPRVTGTTXXXXXXXXXXXXXXXXXXXXEDDYRDDRD----------------LADELAGSDTTPGRLQVVVSGPTGFVSLVETILGEMGIPSSAIVLLD 1627
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 7.180e-65
Identity = 124/167 (74.25%), Postives = 150/167 (89.82%), Query Frame = 3 
Query:    3 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKA-GLVSPAAASPANSFRTMPSGRP 500
            CIEMRIRLYHDGAMS+LLE+L+KDTDNPA+QLQGPF+I KLVPPPAHRNVVMIAAGTG+NPMVQQIRDYLALPR  A S+RSRL L+WQ+ SEA+LYGSEE+TE+QAKS GLLEV VL+SG+ R+RN+PGAAFR+G  K+++KA  +VSP ++SP++S   MP+GRP
Sbjct: 1035 CIEMRIRLYHDGAMSQLLEKLSKDTDNPAIQLQGPFIITKLVPPPAHRNVVMIAAGTGVNPMVQQIRDYLALPRDQAHSTRSRLCLIWQSMSEAELYGSEEITEMQAKSKGLLEVIVLVSGDQRRRNVPGAAFRRGK-KMMSKAMAMVSPVSSSPSSSVIAMPAGRP 1200
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: A0A6H5KC42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC42_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 8.030e-22
Identity = 67/128 (52.34%), Postives = 82/128 (64.06%), Query Frame = 3 
Query:   69 KDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAK---AGLV 443
            ++ DNPAVQLQGPF+  +L PPPAHRNVVMIAAGTG+NP                    S    V     EADLY ++E+T LQAK+NGLLEVT LISG++ +RN+PG AFR    +L+ K   AGLV
Sbjct:  595 QNLDNPAVQLQGPFLQHRLTPPPAHRNVVMIAAGTGVNP--------------------SECNSV-----EADLYCTDELTALQAKANGLLEVTALISGDNTRRNVPGNAFRHAKARLMKKGAAAGLV 697
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 8.360e-22
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 3 
Query:    3 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINP 185
            CIEMRIR+YHDGAMSKLLE+L+KDTDN AVQLQGPF++ KL PPPAHRNV+MIAAGTG+NP
Sbjct: 1202 CIEMRIRMYHDGAMSKLLEKLSKDTDNVAVQLQGPFLVNKLAPPPAHRNVIMIAAGTGVNP 1262
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: A0A6H5K303_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K303_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.440e-21
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 3 
Query:   69 KDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQ 320
            ++TDNP+V+LQ PFVIQKL PPPA+ NV++IAAGT INP V      L      A SSRSRLALVWQATSEADL+G++E+  +Q
Sbjct:    8 QETDNPSVKLQDPFVIQKLAPPPANCNVILIAAGTSINPSV----PLLPSEESGAPSSRSRLALVWQATSEADLFGADEIAAMQ 87
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.220e-20
Identity = 49/61 (80.33%), Postives = 57/61 (93.44%), Query Frame = 3 
Query:    3 CIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINP 185
            CIEMRIR+YHDGAMSKLLE+L++DTDN AVQLQGPF+I KL PPP +RNV+MIAAGTG+NP
Sbjct: 1208 CIEMRIRMYHDGAMSKLLEKLSQDTDNAAVQLQGPFLINKLAPPPVYRNVIMIAAGTGVNP 1268
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: D8LN38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN38_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 4.700e-20
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 3 
Query:   12 MRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQ---IRDYLALP 221
            M IR+YHDGAMSKLLE+L++D DNP VQLQ PF+I+KL P PAHR V+MIAAGT +NP  Q    + D L LP
Sbjct:    1 MHIRMYHDGAMSKLLEKLSEDADNPTVQLQVPFLIEKLAPRPAHRKVIMIAAGTAVNPSKQNCFGLMDCLVLP 73
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Match: A0A6H5JTF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTF1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 9.050e-19
Identity = 111/382 (29.06%), Postives = 146/382 (38.22%), Query Frame = 3 
Query:  186 MVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFRTMPSGRPSNKNSVSSIKSINETSSVVFPED--------------------SDKGARGVEISTGTSILSTVRRHLRASERISSSTS--------------------------------------------------------VASALARGKVSREVLEEVFGQSLLGVVEAARKKEEQLSATVRKRLQSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETILAEMGVLPSAIVLLD 1103
            +VQQIR YL++PR    S R RL LVWQ+T+EAD Y ++E+T +Q KSNGLLEVT L S   R+RN PGAAFRK         G  +P+  S AN F   P+G  SN +S SS          +  +                     +D G +      G   L   R       + S +TS                                                        V   L RG+V+RE+LE VFG++LL  + A  ++         + L SLA                                                  EL G+  T GKLQVVVSGP+ FV  V+ +L +MGV   + VLLD
Sbjct:    3 VVQQIRSYLSIPRDTMFSKRPRLVLVWQSTTEADFYSTDEITAMQEKSNGLLEVTALTSEGGRRRNAPGAAFRKARDIAWNVFGSPAPSNTSSANPFT--PAG--SNLDSSSSEXXXXXXXXSLARDGGRXXXXXXXXTPGRDEKHTAADAGTKKERAPKGIGNLLPTRTWRNVKWKESPTTSDHRRAPMQDTSVSFRHVHEFGVATEIEFKMPEKDVFRVKAPHREKVGICVMGENYQVGDGLVRGRVNREILENVFGEALLSSIAAYNRQ---------RALNSLACSDSDVGDEKEGQGEDDG--------------------------------ELIGTDQTAGKLQVVVSGPTAFVANVKQLLTQMGVPAGSTVLLD 339
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1738.5194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JBL8_9PHAE1.350e-17193.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX04_ECTSI5.650e-16388.50Dopamine beta-monooxygenase, putative n=1 Tax=Ecto... [more]
D8LFE6_ECTSI1.400e-9461.96Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7FQW8_ECTSI7.180e-6574.25Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KC42_9PHAE8.030e-2252.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7J2_ECTSI8.360e-2283.61Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5K303_9PHAE2.440e-2161.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7J1_ECTSI2.220e-2080.33Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LN38_ECTSI4.700e-2064.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTF1_9PHAE9.050e-1929.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1738contigEcto-sp13_S_contig1738:2..7348 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score514.6
Seed ortholog evalue3.7e-143
Seed eggNOG ortholog2880.D7FX04
Model size2688
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.DOMON domain
EggNOG OGs2D0T2@1,2SFBV@2759
Cds size1095
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1738.5194.1prot_Ecto-sp13_S_contig1738.5194.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1738 13..5766 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462906.5705705-UTR-Ecto-sp13_S_contig1738:1..121681462906.5705705-UTR-Ecto-sp13_S_contig1738:1..12Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1738 2..12 +
1681462906.678792-UTR-Ecto-sp13_S_contig1738:5766..73481681462906.678792-UTR-Ecto-sp13_S_contig1738:5766..7348Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1738 5767..7348 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462906.5804508-CDS-Ecto-sp13_S_contig1738:12..721681462906.5804508-CDS-Ecto-sp13_S_contig1738:12..72Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 13..72 +
1681462906.5906835-CDS-Ecto-sp13_S_contig1738:413..5281681462906.5906835-CDS-Ecto-sp13_S_contig1738:413..528Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 414..528 +
1681462906.604906-CDS-Ecto-sp13_S_contig1738:1244..12811681462906.604906-CDS-Ecto-sp13_S_contig1738:1244..1281Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 1245..1281 +
1681462906.6179347-CDS-Ecto-sp13_S_contig1738:1609..17061681462906.6179347-CDS-Ecto-sp13_S_contig1738:1609..1706Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 1610..1706 +
1681462906.6294076-CDS-Ecto-sp13_S_contig1738:2854..30301681462906.6294076-CDS-Ecto-sp13_S_contig1738:2854..3030Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 2855..3030 +
1681462906.6399326-CDS-Ecto-sp13_S_contig1738:3859..40191681462906.6399326-CDS-Ecto-sp13_S_contig1738:3859..4019Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 3860..4019 +
1681462906.6527069-CDS-Ecto-sp13_S_contig1738:4821..51751681462906.6527069-CDS-Ecto-sp13_S_contig1738:4821..5175Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 4822..5175 +
1681462906.6634176-CDS-Ecto-sp13_S_contig1738:5670..57661681462906.6634176-CDS-Ecto-sp13_S_contig1738:5670..5766Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1738 5671..5766 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1738.5194.1

>prot_Ecto-sp13_S_contig1738.5194.1 ID=prot_Ecto-sp13_S_contig1738.5194.1|Name=mRNA_Ecto-sp13_S_contig1738.5194.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp
MRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMI
AAGTGINPMVQQIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMT
ELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAAS
PANSFRTMPSGRPSNKNSVSSIKSINETSSVVFPEDSDKGARGVEISTGT
SILSTVRRHLRASERISSSTSVASALARGKVSREVLEEVFGQSLLGVVEA
ARKKEEQLSATVRKRLQSLARRNKAAAARRRSSSGAGERKEPEKKYGDVD
DEDEEGDDDDDDVFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETIL
AEMGVLPSAIVLLD*
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mRNA from alignment at Ecto-sp13_S_contig1738:2..7348+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1738.5194.1 ID=mRNA_Ecto-sp13_S_contig1738.5194.1|Name=mRNA_Ecto-sp13_S_contig1738.5194.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7347bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1738:2..7348+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGTGCATTGAGATGCGCATCAGGCTGTACCACGACGGGGCCATGAGCAAG
CTGCTGGAGAGGCTCGCGAAGGTGAGGAAAAACGCCAAGGGAGGGGGGGT
TACGTTTGTTGTTGTTTAGGCGACTATTCGCCGCTCGGCAGTGTTTTTCG
GAGCGATAGCTTTGTCTGCTCGAAGTCCTCACATATTTTCTCTCACTCTT
TCTCTGTCTCTCCCTCGCTATGTGACACACACGCGCGTACGTTCTGCCGC
TCTTCCGACCGAATCCATGAAGGGGAAAATGCACAGCATGTGGCGAATTT
TTCACATCTCACTGTTTGAGCATTCACATTTTCGGCTTCTCGTGTGGGTG
TCTTTCCTATAACTAACGCCGTGCCGGTGCCTTCCGCGAACACGCACACC
GGGTACCCATAGGACACGGACAACCCCGCGGTACAGCTGCAGGGCCCCTT
CGTGATCCAGAAGCTAGTCCCGCCGCCGGCGCACCGGAACGTCGTCATGA
TCGCCGCGGGCACGGGCATCAACCCAAGTACGTTTGGTGGAGTTGCTGGT
TGGTGTCGTTTGTTGGTGGTAATGGTGTTGTTGTTGCTGCTGCTGCTGGT
GTGTGTGTTGTTGTTGGTATTCGGTGTTGGTTTTGGTTTGTAGCAGAAAT
CCACGTGTCCCGGAATGAATGCGATTTACCGTTCGAAACGACGCCAAAAC
GTTGTTCAAAGACGTTTTGAGCGAAGAAGCGTCTTGATGAAGCGATGCTG
TGGTGCTGCCCTTATCGTAGACCCTCCACCACCTCGTGCATAACCAAACA
GGATGATACAGGGGTTAGGTTCATTCCCCGCACGGAGCGCCTCAAGCTCA
CCTGCCCGATGTCATGGACCTATAGGCAGCTCACTGTTGCTTGCTCCTTC
GCTATGCCTTCGTCGTCTGCCCTTCGTTCTCGTTTTTTTTTTTTTCTCTC
CTTGGCAACCGCCGCATCTACTATTTATCACTGCGTGGACGTCGGACGAC
ACCAACACCGGCGGCGAATTCACAACGCTGGCGGCGGAATATCATGGAAT
GCTCGATCGACGGGATGGTACTGCTTGGTGTCACTCTCGTTGGCCGGCCG
ATGATCCAAATTGATGTACTGTAACCTCGTCTGCGGTGTTACACGAAACC
ACAACCTACGAAACACACACCACGCCGAACGGATTTGGTTTCTCGTCGAC
GAATCGTGCCGGGTCTTCTTCCGATTGCGCTGCGCTTGCGAAGTGGTGCA
ACAAATCCGAGACTACCTGGCCCTGCCGAGGTAAATGCTCGCTCTCTTTC
CTGAATGTGGTCACAAAAGAGAAACGCTTTTGTCTCAACACCGTTGTTGT
TTTTCTACTCTAGCTTTTTTGTGAGGCGTGCTTGGGCGCTGTTGCCAGCG
CCGTTGGGAGAAACCACGAAACCACCAACTTTCATTCTCGAGTACACAGA
GTGACCTTGAGTTGGTTTCCGTTTTGGACAGCTTTTGTCGGCGGACCTAC
CGTTGGGTGGTGCGTCCCTTGCCGCGTCGATTCACACCTCACCGTACCTC
GTCGCCCCTCTTGCTGCTTCTGCTCCTGCTGATGCTGATGCTGATGCTGT
TGCTGCAGAGTTGCCGCGCAGTCCTCGAGGTCTCGGCTGGCCCTGGTGTG
GCAAGCGACAAGCGAGGCCGACCTCTACGGCTCTGAAGAGATGACGGAAC
TACAGGTAGAATACGTGCATCTCTCTTGCACATGAAGCAGATAAGGATGC
TATTCGACACGCTTGACTTGTGCGGCTATCCATACGCCTTCCTGCGTGCG
GCAGTAAAATTCCTTTACGATGCGCTTGGCCTGTGTGGCTATCCCGCCGA
CCGTGCGTTTATCCTAAATAGTATGATTGCTGCCTTTGCGAGGTGAGTGA
AACGCAAGTGCTGTAAACGGCGGACGATACGACCTGTGGCTTTTCCTAGT
ATGCGTTTGCCGGCTTAACAGTTTCCGTGTCACGTGACGAGCGAGATGCA
AGTGGTGCAAGTACCCCACGATACGGCCAATCTATCTATGGGCTGCTTTG
CCGCCCGCCGTGGGGTTTCCAAGATTGATGCCTCATTGAGCGTTTCCGTT
TCCTGCGCCGACGAGGTGATTGAAATGCAGGCAGGTACACACGGCGGTAC
TGTAAGTTCATATGCTGACGTAGGACAAGGTACCCCGCCCACCGTGAGGT
GTCCATCAATGTATGCCTCCCACTGGGGGTTCAATTTCGGGGGGGTTGTA
CTCATGATGTGAACGCATGCCGTGCAGTTGTTAGGCCGCTGGCCTCGTAT
CGCGAAGGGCAGCAGGCATGGCAGTCTCGGTCACACCCAACAACTTGCGC
GGTCGCCCACCCGTCGCCCGCCACGCGCTGTTGTTATTCCCTCCACCCGC
TCGTAGGATGTACGCAAGTCGACGTTTTGATCGACCATTTTCCGTCGGCA
GCGTCCCGAAACTACGTCTTCAGAAACGTTGTCGATCGACAAAAACGACG
ACGACGGCGACAACAACAACAACACCCCCGCCCTACAATGGCCCACTCCT
GTTGAAATTGCACAGCCTCAATCGGTTACGTTATCCTCGATAAGAATCAA
TATATCTTGAGCACGCTCGAGTTGTGTGGCGTTCCCTGCGTTGGGATTCC
CCCCCCCCGCTCGTAACAGGCGAAGAGCAACCACGTGCTGGTGTTATCCT
CGATACGGTGCGCTCGCGTTACTTGCTGGCGTTGCCGCCCCCGCCTCCCG
TGTATGGGCGTTCTCCTTGGCACGAGAAATAAGTGTCGTGAACTTCGCTC
GCGTTGGTTGTTGGCGTGCTCGTGTCGGGTGCCGCCGCCTCTCGCCGTTA
CAGGCGAAGAGCAACGGCCTTCTCGAGGTGACCGTGCTCATCAGCGGGGA
GCACCGCAAGAGGAACATCCCCGGGGCCGCGTTCCGGAAGGGTGCCGGGA
AGCTCCTGGCCAAGGCCGGCCTCGTCTCTCCGGCGGCGGCGTCGCCCGCC
AACTCCTTCAGGACCATGCCGAGCGGGAGGCGAGTGTGTGTGTGTGGTGT
GTGTCTCGACTTGAAAATATGCGTTCGCCGAATTTGTCTGCGTGGTAGAA
GCTCCAATACGCGGTCACACGGACGGGTTCCTCTCCTTCACTCGCACCGT
TCCTGCGGCTCTTATTGCTCAAGAGAAAACACCCCCCCCCTGTGATGCAA
GGTAGTGAAGTCTTGAGGTCCTGGAAAAGAGTATCGCCGTGGGTGTTATT
CTTGTGCCAGTGGGCGTGGCGCGTGGCGCGTCGCCCTGTTACTCGACCTG
AGAGTAGTCATGCACTCTTTTTTTTTTGGGTTGGGTTCGTGTTGACCGCC
GGTGGAATATTTCCCCAACACCGCGAAGTTGGTGGTTGTGTTTGTTTGGG
GCTATTTCTTTTCTTTTGGCCGGGGGGAGCGTTATGTGGTGTCGTATGTG
GCGGCGGGTGGTGGGTGTCGAATGGGGGCCCGTTCTTCGGATTGGTGCTG
GTGTGATCGCTCGTTTGTCTGATTGTGTACAATATTGATAGTAGTGTCGT
GGCCGGTGTGGTATTTTTCGCCTGAGCTGTTGGGCGGTCATTTGTACACG
TTTCGATGTGATACGATCCGTTTCGTACTTTTCTTGTTGCTCGCCTGGTT
ATCGGTATGCTTTTCCGTCAAATCTCTCTCGCTCTGTCTCTCTCGGTGTT
CGTAGAAGCAAACAGTGTTTTTCTGTCGTTTGGTTATCGACACGGCCACA
GCAACGGCGACAACCACCACCCAGCAACCAAACAGTGAGCAAACCATTCT
GATCCCCTGATCCCCCGCACGCGCTCATTCGTTCATGTCGTCAATCTCTT
GGGCTCAGGCCGTCCAACAAGAACTCCGTCAGCTCGATCAAGTCAATCAA
CGAGACCTCGTCGGTCGTCTTTCCGGAAGACAGCGACAAGGGAGCGCGGG
GGGTGGAGATCTCGACCGGGACGAGCATTCTTTCCACTGTACGGCGACAC
TTGCGAGCGAGCGAAAGAGTGAGTAGCAGCGTGCTGAGCGAGAGCGTGAG
TCAAAGATGGTAGAGTAGGTCGGTTTTGCAGTTCGTCCGTCTGTTTCATT
TTGCATCAGCTGTCTGCTGCCAACTTTTCGTCTACAGCGTGCGACGCACG
CTTGAAATTCTCCACACACCACCGCTTCACGGCACGTCTGGATATGTTTT
TTTCATGCGTGCTTTCCCGCAGTTTTTCTACGTCCGTTTTTTTTCCCCCT
CCTTTGTCTCTTGAGCGGTTGCCGCCCTCCTCATCTCATCGAGATTCTCT
AGGTCATTGCTATCCTCCGTTCTTTTTGTACCCCCAGTGGTTTGTCCTTG
TAACACGTACGTAGCCTGGGCCGACGAAACCCTGCGTATCTCCCCTTCCC
GGCATTGTATGGATGCGGGGCCGACTACGGCATTTGTTTGCGTTTGCGCG
TACACAAACACACAAGCACACAAACACACCGCGCTCAATGGCCTTACAAC
AACAGCATGCACAAACATGATTACACCCCCCCTGCGCTGCTTTGGTCGAT
GGTCTGACGACTGCGGCATGCGTTTGGATGAGCAGAAACACGCAATGCGT
TCAATGGTCTCACAACGAAAGCATGCAAAACAGCCTCCGCCCCCCCGGGC
GCTCTTCCGGTCATTGGTCTAACGACTACGGCATACGTTTGCATGTTTTT
ATTGGTTTTTACTCCCCCTCCCCGGCCCTACTCTTGTGGACGCGTGGTCA
ATGTTCTAACCCATAAGTCATTCAAACCACGAGTACGCCCCCCCATCCCC
CCCCCGCGCGTTTTGATCAGATATCTTCGAGCACCAGCGTGGCGAGCGCT
CTCGCTCGCGGCAAGGTTAGCCGCGAGGTCCTCGAGGAAGTGTTCGGCCA
AAGCCTGCTCGGGGTCGTGGAGGCGGCCCGCAAGAAGGAGGAGCAGCTCT
CCGCCACGGTGCGGAAGCGGCTGCAGAGCCTGGCCAGGAGGAACAAGGCC
GCGGCGGCCAGGAGGAGGTCGTCGTCGGGCGCGGGGGAGCGCAAGGAACC
GGAGAAAAAGTACGGCGACGTTGATGATGAAGACGAAGAGGGCGACGACG
ACGACGACGACGTTTTCGCAGACTTTTTGGCTGATGAGCTTGCCGGGAGC
GGTGACACCCCTGGGAAGCTGCAGGTCAGCCACGGAGCGAAAAATATACG
TATAGGAATTGGTTCAACAACGTGGTCTCCCCTGCCACTCACTGCAAATA
CCTTCAACACGGGCCCCGTTGGTGTCAAGTGATACACAATTGCAGTTTAT
GTACGAAAAACCTTTTGAGCTCCTCCGAGCTTGAGCAGTGGCGCCCGAAC
TCCAACGTTGGTCTCCATTTCGTGCCTGTCTGTTGGTCGTGATGGTTTTT
GCACGATTTTGATCTCATTTTGCCGGCAGGCAGAGGCTGAGACGATATGC
TTTCCTCTGCTCGTTTTTCTGCCCTTGCCCCAAGATTGCAGTTGTGGTGT
CTCAAGAGTATTATGATTTTTTCCCACGCATGTGTGCCGCTATTGTAGCT
AGAACGTGCAAGGCTTTCTCTCTCTTTCTCTCCGCTGTTGTTGTTCTTGT
TCTCTTCTGGCGGGTGGACTGAAAGACGGACTCACACTCATGCGGTCGAT
CGATGCTTCCCTCCTCCAGGTGGTGGTCTCCGGGCCGAGCGGCTTCGTGT
TCTACGTGGAAACCATCCTCGCCGAGATGGGCGTCCTCCCTAGCGCGATC
GTCCTGCTCGACTGATTCTCTTGTCTCGACAACGGCTTGCTGGCGCCCTC
CGAATCCGAGTGCTGCTGCTCCAGAGTAGACCTGCAGTACGGTAGAGGGT
GTTGAATGCTTCCAAGTTTTTCATAGCTGTTGTGTTCGTGTTAACATGTG
TATTCGGTTGGGTAACTACTGAGCAGTTTTTTTCCGTTGTAGCCGGTGGA
ACCCGTTGTTTTCGCGAAACCGTTCAATTTTTGGATGAGGCGTTTCCCCC
CCACTCGTTTTCTGGGGTCGTCTCGGATTTGTAGGAAGATTCTGTTCATT
TGGAGTGATGGAGGAGAGTTGACGAACAGGGTAACGACCGCACGCTAGAC
GTCCTGGAAAAGGAAAATTTAGTGCTCAGGAGTAGTTGACAGAGCGGGGG
ATAAGGAGGATTGATTGGCCAACTTAGTTAGGCCAGGAGTTCGTCGGGGT
AATTTATTTGTGCGGTTGGTTGCGCGAACGTCAACTTTCGGGTCGAGGGT
CGTTTTCTTGGTCGATGTGTTTTCGGCGCTATGCAAGGCACCTATCCCCC
GATGGCTTTGCGTGAAGCCCAGGATGGTAATGATGGTTGGGCGAGCGCAC
TCATAGCGTAGAGCTTTGTTCGTGGTAGGGGTCACGTTTTTCCATTCCCG
GTGTTTCGAGGAGGCCTTGTGAGCCTCCTTTTTTTTACATTTTTTTATTT
GGTGTTTTCGTAGGTGAGGCACATTTTTGTTGCTGGTATCGCTTGGGCTT
TGGGGACCTTTTCACCAGAAGGGGGCGGTCCTCTGTTGGCATCTTGTCCC
GTGTAGTAGGTTTCTTCGTGTCTCGGCGACTTCCCTCCGTGCCTCGGTGA
GGCATGTAGGTTGGTTTTTTTCCGGTTCGTTGTCATGGCGCCTATCTTGC
AGTGCCGTTGGCTTTGGTTGGTTGGACGACACCGCCGTCTGCTATCGTGC
AGTTTTTTTTTTGAACACGAAAGCGGGAACTTCATTGGTTTGACCTTGTT
GGGAATTTTTTGTTGTTGAGATGTAGAAAATGTTGGCTTGACACCATCAA
CGTGGTGGGTGTTTTTTTTTATGTTGGGTGTGTATTCTCGATCTACGAAA
ATACCTGCGCTGGGTCCCGGGGAGAAGGCCAAGGCGCGCGCGATCAGCAT
GTATATGCAGTGAGTGTTGTGAAAAAATTCTGGCCTCGCCTTCTTCGCAG
GAAGGAGATGTTGGTGTGACGAGTGACGCTTCGGCCCACCCGAGTGTATT
AACAGCAGTGGAAGACAAACTTCGCACAAGCCCTCCCGCGGTGGCGAAGT
TCCACGGCATCAAGCTTGACTATTGCTACTGTAGAGCTTTAGCCAGCTGA
GTCGTGTCGACGCTAATGGTCTCGCGGGGCGCCTTCCGTGCTGCGAGCTC
TCTTGCTTCCTGTTATCCATCCGAGTATTCCTGTTTTTAGAGTGTTGTTG
CATGTGTCGGAAATGTGTGGGGATTGATGCTGTAAAAGCTCACCGCAGCG
TGGGTGAAATCATTTCCGGGAGATGATAAGAATCGATTTTGAAACCAAAT
AAATTATTTTGTGCTTTTTTGACAACTAAATGGTAGGTTAACTGTAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1738:2..7348+

>mRNA_Ecto-sp13_S_contig1738.5194.1 ID=mRNA_Ecto-sp13_S_contig1738.5194.1|Name=mRNA_Ecto-sp13_S_contig1738.5194.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1095bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1738:2..7348+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCATCAGGCTGTACCACGACGGGGCCATGAGCAAGCTGCTGGAGAG
GCTCGCGAAGGACACGGACAACCCCGCGGTACAGCTGCAGGGCCCCTTCG
TGATCCAGAAGCTAGTCCCGCCGCCGGCGCACCGGAACGTCGTCATGATC
GCCGCGGGCACGGGCATCAACCCAATGGTGCAACAAATCCGAGACTACCT
GGCCCTGCCGAGAGTTGCCGCGCAGTCCTCGAGGTCTCGGCTGGCCCTGG
TGTGGCAAGCGACAAGCGAGGCCGACCTCTACGGCTCTGAAGAGATGACG
GAACTACAGGCGAAGAGCAACGGCCTTCTCGAGGTGACCGTGCTCATCAG
CGGGGAGCACCGCAAGAGGAACATCCCCGGGGCCGCGTTCCGGAAGGGTG
CCGGGAAGCTCCTGGCCAAGGCCGGCCTCGTCTCTCCGGCGGCGGCGTCG
CCCGCCAACTCCTTCAGGACCATGCCGAGCGGGAGGCCGTCCAACAAGAA
CTCCGTCAGCTCGATCAAGTCAATCAACGAGACCTCGTCGGTCGTCTTTC
CGGAAGACAGCGACAAGGGAGCGCGGGGGGTGGAGATCTCGACCGGGACG
AGCATTCTTTCCACTGTACGGCGACACTTGCGAGCGAGCGAAAGAATATC
TTCGAGCACCAGCGTGGCGAGCGCTCTCGCTCGCGGCAAGGTTAGCCGCG
AGGTCCTCGAGGAAGTGTTCGGCCAAAGCCTGCTCGGGGTCGTGGAGGCG
GCCCGCAAGAAGGAGGAGCAGCTCTCCGCCACGGTGCGGAAGCGGCTGCA
GAGCCTGGCCAGGAGGAACAAGGCCGCGGCGGCCAGGAGGAGGTCGTCGT
CGGGCGCGGGGGAGCGCAAGGAACCGGAGAAAAAGTACGGCGACGTTGAT
GATGAAGACGAAGAGGGCGACGACGACGACGACGACGTTTTCGCAGACTT
TTTGGCTGATGAGCTTGCCGGGAGCGGTGACACCCCTGGGAAGCTGCAGG
TGGTGGTCTCCGGGCCGAGCGGCTTCGTGTTCTACGTGGAAACCATCCTC
GCCGAGATGGGCGTCCTCCCTAGCGCGATCGTCCTGCTCGACTGA
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