mRNA_Ecto-sp13_S_contig17348.5180.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17348.5180.1
Unique NamemRNA_Ecto-sp13_S_contig17348.5180.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: D8LLJ7_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ7_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 6.460e-126
Identity = 178/192 (92.71%), Postives = 179/192 (93.23%), Query Frame = 1 
Query:    1 PAI-QAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 573
            PAI +AVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTG            PGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL
Sbjct:    6 PAIAEAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTG------------PGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 185
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A835Z972_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z972_9STRA)

HSP 1 Score: 287 bits (735), Expect = 8.300e-97
Identity = 137/192 (71.35%), Postives = 153/192 (79.69%), Query Frame = 1 
Query:    1 PAI-QAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 573
            PA+ +AV RG+PVVF D+ IGG   GRIK+ELF D CPKTAENFR+FCTGE + Q +P GYKGAPFHRVIK FM+QGGDFVKGDGTGRMSIYGEKF DENFDLRHTG            PGLLS ANSGPNTNGCQFF T AKA WLDG H VFGKVLDPASM  +RK+ENV+ G +N+PRL VV+ +CGEL
Sbjct:    6 PAVAEAVDRGSPVVFMDIAIGGTEMGRIKIELFADVCPKTAENFRQFCTGEFKRQNLPVGYKGAPFHRVIKGFMIQGGDFVKGDGTGRMSIYGEKFDDENFDLRHTG------------PGLLSSANSGPNTNGCQFFFTLAKAEWLDGKHTVFGKVLDPASMNVLRKVENVTVGTHNRPRLPVVVSQCGEL 185
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: K8YRK9_NANGC (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRK9_NANGC)

HSP 1 Score: 275 bits (702), Expect = 6.930e-92
Identity = 133/189 (70.37%), Postives = 147/189 (77.78%), Query Frame = 1 
Query:    7 IQAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 573
            ++AV RGNPVVF DV+I   PAGRIKMELFKD  PKT ENFR+FCTGE+R  G+P GYKG+PFHRVIKDFM+QGGDF+KGDG+G  SIYG+KFADENFDLRHTG            PGLLSMANSGPNTNGCQFF+T  K  WLDG HVVFGKVLDPASMLTVRK+EN         RL V + ECGEL
Sbjct:    7 LEAVNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRESGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTG------------PGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A7S2BCB3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCB3_9STRA)

HSP 1 Score: 274 bits (701), Expect = 2.080e-91
Identity = 131/193 (67.88%), Postives = 153/193 (79.27%), Query Frame = 1 
Query:    1 PAI-QAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGV-NNKPRLTVVIQECGEL 573
            PA+ +AV RGNPVVFFD+TIGG PAGRIKMELF D CP+TAENFR+FCTGE R    P GYK +PFHR+IK+FM+QGGDF+K DGTGRMSIYGE+F DENF+LRH+             PGLLSMANSGPNTNGCQFF+T AK  WLDG HVVFGKVLDPAS++ +RK ENV     +NKP+L V++ +CGEL
Sbjct:   20 PAVAEAVERGNPVVFFDMTIGGVPAGRIKMELFADECPRTAENFRKFCTGEFRRSNHPVGYKDSPFHRIIKEFMIQGGDFLKQDGTGRMSIYGERFDDENFNLRHSA------------PGLLSMANSGPNTNGCQFFLTCAKCEWLDGKHVVFGKVLDPASLMVLRKCENVQVEPKSNKPKLPVIVAQCGEL 200
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A067CUM4_SAPPC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUM4_SAPPC)

HSP 1 Score: 270 bits (691), Expect = 3.760e-90
Identity = 131/192 (68.23%), Postives = 150/192 (78.12%), Query Frame = 1 
Query:    1 PAI-QAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 573
            PA+ +AV RGNPVVFFDV +G AP GRIKMELFK  CPKT ENFR+FCTGE+R   +PTGYKG+ FHRVI DFM+QGGDF+KGDGTGRMSIYG+KFADE+F  +HT             PGLLSMANSG +TNGCQFF+T A   WLDG HVVFGK+LDPAS+L +RKIE+V TG  NKP+  V I ECGEL
Sbjct:    3 PALSEAVRRGNPVVFFDVALGNAPLGRIKMELFKRECPKTVENFRQFCTGEYRRGDMPTGYKGSHFHRVIPDFMIQGGDFLKGDGTGRMSIYGDKFADESFAYKHTE------------PGLLSMANSGVDTNGCQFFITCAPCDWLDGKHVVFGKLLDPASLLVMRKIESVQTGAANKPKTPVTITECGEL 182
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A7S3RA41_DUNTE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RA41_DUNTE)

HSP 1 Score: 270 bits (689), Expect = 7.570e-90
Identity = 127/181 (70.17%), Postives = 143/181 (79.01%), Query Frame = 1 
Query:   28 NPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGE 570
            NPVVFFDVTIGG PAGRIKMELF D CPKT ENFR+FCTGEHR QG+P GYKG+ FHRVIK+FM+QGGDF+KGDGTG  SIYG +FADENF  +HTG            PGLLSMANSGPN+NGCQFF+T AK  W+D  HVVFG+V++   ML VRKIENV+TG NNKP L  +I ECGE
Sbjct:   14 NPVVFFDVTIGGMPAGRIKMELFADVCPKTCENFRQFCTGEHRRQGLPVGYKGSSFHRVIKEFMIQGGDFLKGDGTGSTSIYGSRFADENFIAKHTG------------PGLLSMANSGPNSNGCQFFITCAKTDWIDNKHVVFGRVIEDG-MLVVRKIENVATGKNNKPNLPCIITECGE 181
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A7S2DPX7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPX7_9STRA)

HSP 1 Score: 270 bits (689), Expect = 9.290e-90
Identity = 130/193 (67.36%), Postives = 151/193 (78.24%), Query Frame = 1 
Query:    1 PAI-QAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVN-NKPRLTVVIQECGEL 573
            PA+ +AV RGNPVVFFD+TIGG PAGRIKMELF D CPKTAENFR+FCTGE R    P GYKG+PFHR+I++FM+Q GDF+K DGTGR+SIYGEKF DE+F LRH              PGLLSMANSGPNTNGCQFF+T A+  WLDG HVVFGKVLDPAS++ +RKIENV      +KP+L V+I +CGEL
Sbjct:    8 PAVLEAVERGNPVVFFDITIGGVPAGRIKMELFADECPKTAENFRQFCTGEFRRANHPVGYKGSPFHRIIREFMIQAGDFLKQDGTGRISIYGEKFEDESFSLRHNE------------PGLLSMANSGPNTNGCQFFLTCARCEWLDGKHVVFGKVLDPASLMVLRKIENVQVDPKTSKPKLPVLIAQCGEL 188
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A482RTU9_9ARCH (Peptidylprolyl isomerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTU9_9ARCH)

HSP 1 Score: 269 bits (688), Expect = 1.080e-89
Identity = 127/187 (67.91%), Postives = 145/187 (77.54%), Query Frame = 1 
Query:   13 AVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 573
            A+ RGNPVVFFDV+IGG  AGRI++ELF D CPKTAENFR+FC GE+R   +P GYK  PFHRVIK FM+QGGDF +GDGTG++SIYG  F DENF LRHTG             GLLSMANSGPNTNGCQFF+T  K  WLDG HVVFGKVLD AS+L VRKIENV +G N+KP+L V I++CGEL
Sbjct:    8 AIERGNPVVFFDVSIGGVAAGRIRIELFADVCPKTAENFRQFCCGEYRRNTLPVGYKACPFHRVIKGFMIQGGDFERGDGTGKLSIYGSSFPDENFVLRHTGA------------GLLSMANSGPNTNGCQFFITCGKCDWLDGKHVVFGKVLDDASLLVVRKIENVPSGPNDKPKLPVTIEQCGEL 182
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BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A485LRW0_9STRA (Peptidyl-prolyl cis-trans isomerase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LRW0_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.080e-89
Identity = 128/188 (68.09%), Postives = 146/188 (77.66%), Query Frame = 1 
Query:   10 QAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 573
            +A+ +GN VVFFDV +GGAP GRI+MELFK+ CPKT ENFR+FCTGE+R   +P GYK + FHRVIKDFM+QGGDF+KGDGTGRMSIYG+KFADEN  LRHT              GLLSMANSGP TNGCQFF+T     WLDG HVVFGK+LD AS+L +RKIE+V TG NNKPR  VVI ECGEL
Sbjct:    7 EALRKGNVVVFFDVALGGAPLGRIRMELFKNECPKTVENFRQFCTGEYRRNELPVGYKASTFHRVIKDFMVQGGDFLKGDGTGRMSIYGDKFADENLTLRHTEA------------GLLSMANSGPGTNGCQFFITCGPCDWLDGKHVVFGKLLDSASLLVMRKIESVPTGANNKPRTPVVITECGEL 182
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Match: A0A2D4C495_PYTIN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C495_PYTIN)

HSP 1 Score: 264 bits (675), Expect = 1.020e-87
Identity = 124/188 (65.96%), Postives = 146/188 (77.66%), Query Frame = 1 
Query:   10 QAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 573
            +A+ RGNPVVF D  IGGAPAGR+K+ELFK  CPKT ENFR+FCTGE+R   +P GYK   FHRVIKDFM+QGGDF+KGDGTGRMSIYG+KF DENF  +HT              GLLSMANSGPN+NGCQFF+T A   WLDG HVVFGK+LDPAS+L +RK+E+V  G N+KP+L++ I ECGEL
Sbjct:    7 EALKRGNPVVFLDXAIGGAPAGRLKLELFKKDCPKTVENFRQFCTGEYRKSDLPVGYKACTFHRVIKDFMVQGGDFLKGDGTGRMSIYGDKFPDENFLHKHTEA------------GLLSMANSGPNSNGCQFFITCAPCEWLDGKHVVFGKLLDPASLLLLRKMESVPVGSNSKPKLSISITECGEL 182
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17348.5180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLJ7_ECTSI6.460e-12692.71Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A835Z972_9STRA8.300e-9771.35Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
K8YRK9_NANGC6.930e-9270.37Peptidyl-prolyl cis-trans isomerase n=3 Tax=Monodo... [more]
A0A7S2BCB3_9STRA2.080e-9167.88Peptidyl-prolyl cis-trans isomerase n=1 Tax=Floren... [more]
A0A067CUM4_SAPPC3.760e-9068.23Peptidyl-prolyl cis-trans isomerase n=2 Tax=Saprol... [more]
A0A7S3RA41_DUNTE7.570e-9070.17Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dunali... [more]
A0A7S2DPX7_9STRA9.290e-9067.36Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyo... [more]
A0A482RTU9_9ARCH1.080e-8967.91Peptidylprolyl isomerase n=1 Tax=archaeon TaxID=19... [more]
A0A485LRW0_9STRA1.080e-8968.09Peptidyl-prolyl cis-trans isomerase n=5 Tax=Aphano... [more]
A0A2D4C495_PYTIN1.020e-8765.96Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17348contigEcto-sp13_S_contig17348:514..2971 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score362.1
Seed ortholog evalue1.6e-97
Seed eggNOG ortholog2880.D8LLJ7
Preferred namePPIH
Model size576
KEGG koko:K09567
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006457,GO:0006464,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016018,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0033218,GO:0034641,GO:0036211,GO:0042277,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045069,GO:0045070,GO:0045292,GO:0046483,GO:0046540,GO:0048518,GO:0048524,GO:0050789,GO:0050792,GO:0065003,GO:0065007,GO:0070013,GO:0071001,GO:0071704,GO:0071840,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:0140096,GO:1901360,GO:1901564,GO:1903900,GO:1903902,GO:1990904
Exons4
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0879@2759
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase
Ec32 orthologEc-04_005600.1
EC5.2.1.8
Cds size576
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462905.517282-CDS-Ecto-sp13_S_contig17348:513..6241681462905.517282-CDS-Ecto-sp13_S_contig17348:513..624Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17348 514..624 -
1681462905.5491831-CDS-Ecto-sp13_S_contig17348:1587..17001681462905.5491831-CDS-Ecto-sp13_S_contig17348:1587..1700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17348 1588..1700 -
1681462905.5616314-CDS-Ecto-sp13_S_contig17348:2082..22721681462905.5616314-CDS-Ecto-sp13_S_contig17348:2082..2272Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17348 2083..2272 -
1681462905.5721607-CDS-Ecto-sp13_S_contig17348:2809..29711681462905.5721607-CDS-Ecto-sp13_S_contig17348:2809..2971Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17348 2810..2971 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17348.5180.1prot_Ecto-sp13_S_contig17348.5180.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17348 514..2971 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17348.5180.1

>prot_Ecto-sp13_S_contig17348.5180.1 ID=prot_Ecto-sp13_S_contig17348.5180.1|Name=mRNA_Ecto-sp13_S_contig17348.5180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
PAIQAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGE
HRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENF
DLRHTGEKKDKCTQHVECPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLH
VVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL*
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mRNA from alignment at Ecto-sp13_S_contig17348:514..2971-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17348.5180.1 ID=mRNA_Ecto-sp13_S_contig17348.5180.1|Name=mRNA_Ecto-sp13_S_contig17348.5180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2458bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17348:514..2971- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCGCGATCCAGGCGGTGGCACGAGGAAACCCTGTGGTATTTTTCGACGT
GACCATCGGCGGGGCGCCGGCGGGGCGCATCAAGATGGAGCTGTTCAAGG
ACACCTGTCCCAAAACCGCGGAAAACTTCAGGCGGTTCTGCACCGGGGAA
CACCGGCATCAGGTGCGTTTTCGTCCCCCCTTTTTCATGAACTCTTTGCG
TAGTCCTTGTTTTGTCTTTGGTGAGACGTTGATTGTTGTTTCAGAAAAGC
CAAGATTTGTTTCAGGTTTTTCCGAGTGTTTTGGTTTCCCCAATCACACC
AAGCCAGGTTCCAAAGGCCATTGTGTGCCTCCGCCCTCTATCAACGCTCG
GGCTTACCCACCCTTTTCTTGCTTTACAAGTGACAGGAATCGACGTGAAC
TTGGGGCCAGCGGCCACAGCATCCCCCCCCCACGCCGCCCATACCACATG
AGCGATCGCTATGCCTCCTGGCTTCTTTCTCTTTGCTATTCTCGCACCTG
AACAACTCCTCTAACTGCTGGTCTGCCGCTCTGCTGTTGTTCAAAACACC
CCGACAAACATGCAGCAGCAGCAGCAACATGCAAACTTTCATTGGTAATC
TACGTACACAGCAACAGTCACCGTCTCTCATCTATCTGCTGACGTCATTC
GTTCGCGTCGGCGTTTGTTTGCCTCGTTGTTTCCATGGCGACGATGCAGG
GCATTCCGACGGGGTACAAGGGGGCGCCTTTCCACCGCGTGATCAAGGAC
TTCATGCTTCAGGGGGGAGACTTCGTGAAGGGAGACGGCACGGGCAGGAT
GAGCATCTACGGGGAGAAATTCGCAGACGAGAACTTCGACCTCCGTCATA
CAGGCGAGAAAAAAGACAAGTGCACGCAACACGTGGAGTGTCGGTCCCGA
AAAGAGGCCCTGCTTCGGCACACGGTCCTCGGCTGCGCCGCGGGAGCGAG
CTTTGGTTTGCGAAAGGGGACGTTGCTTCGGGACACGGCGGTCGGTTTCG
CACAGGGAGGACGCGCCTGGGTAGTGGTAGACTGCTACTGCGCAACAAGG
AAAATTTGCCATACGGATACGCACTTTGTACGCGGCGGTAGCCCGACTTC
ATGGTGTTGTGGGGGTGGGTAAACACCAGCTTTGTTGGATTTGAAGACAC
GCCGCACCTCGTTTGTTTCACCCTCTTCTCATGTGTAGCCTTCCCCTCCC
CGGCATGTTGGTGCTGTACTTGTCCTACTTCCTGCGTCGCGGCGGTGCGC
CTGTCTCCCCCCAACAAACAGGTCCTGGACTGTTGTCCATGGCAAATAGC
GGGCCAAACACGAACGGCTGTCAGTTCTTCGTGACGACGGCGAAGGCAGC
CTGGCTCGACGGCCTCCACGTGGTGTTCGGAAAGGTGAGAGACAGCACGG
CTGCCATACCCTTGTAGAGGCGGGGACAGGATAGGTCAGGCCTGTTACCC
GCGGCTTGGGGTGCCCTCCCACCGCCGCCCTTCCTTACACCGCTACGCGG
TAAACTCAGTTGGTTCCAGAAACTTGTCATGGACGGAGTAGCGTATGCAC
TCCATGTTGTGGGCGGTGTGATGCTTCTGCGGTAGGAACTCCGTGGGTGG
CTCGTAGTTTGTTTCGGGTGCGCGAGTATGCCCCTCACCCGCGGGTCAAA
GACACGGTGTACTATGTATTCCTCTGTTCCTCTCGTTTGGGTGGTCCCGG
CCATGATTTGAATAAAAACTCTGAAGTAACGTTCAAAAAGCGCGCACAGT
TGATATAGACTGCTACTCCTTTCTCGCGATGACAGCCATAGGCACGTAGA
TACCGAAGGTGTGCCGGCAGACGTAGTCCTAGTGGTGCAGAAACGAGTGA
AACGGGGGTAAAGAGAGTCGTTGCGCACCGTACCCACCAACCGTTGTGGA
GTGTCCCGGATACTCCGCCTCCACATCCACATCTACTCGCGCGTACTGGC
CAGAGGTCCAACTGGCAGTCGACCACCGGCGATTGTGAGCGGCTGCAACG
AAATCGAGATGCCAAACGTTTCCCGCAGCGTTCGCTCATCATTTTTTTCC
TGCCCCAGCAAGAACGTGAAGAGCTGCTTTTCTTCACTGCGGGTTGTTCT
CTCGCCGCACTTTGTTTTCTCCGTGGTGCCTACTTTTCACTTGACTTTGC
GCCATAGCGGTAACCAACCGCGTAGACTAACGTCGAGTTGTCAGTGGAAT
CACCACTTGCCAAACCGCAGTAACTGCGAGAAAAACGTCGAGTGTTGAAT
TGAATCCCACCACTTCGACTTGCAAAGAAGGTTGGCTCCGTGTCGAAAAA
AACGGGAAGCGACAGCGACGTGCTTCTTGATTGTCGCGCGCCCGCAGGTG
TTGGATCCAGCATCTATGCTCACGGTGAGGAAAATCGAGAACGTCTCCAC
CGGGGTGAACAACAAGCCCCGACTCACCGTCGTCATCCAGGAGTGCGGAG
AGCTCTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17348:514..2971-

>mRNA_Ecto-sp13_S_contig17348.5180.1 ID=mRNA_Ecto-sp13_S_contig17348.5180.1|Name=mRNA_Ecto-sp13_S_contig17348.5180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17348:514..2971- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCGCGATCCAGGCGGTGGCACGAGGAAACCCTGTGGTATTTTTCGACGT
GACCATCGGCGGGGCGCCGGCGGGGCGCATCAAGATGGAGCTGTTCAAGG
ACACCTGTCCCAAAACCGCGGAAAACTTCAGGCGGTTCTGCACCGGGGAA
CACCGGCATCAGGGCATTCCGACGGGGTACAAGGGGGCGCCTTTCCACCG
CGTGATCAAGGACTTCATGCTTCAGGGGGGAGACTTCGTGAAGGGAGACG
GCACGGGCAGGATGAGCATCTACGGGGAGAAATTCGCAGACGAGAACTTC
GACCTCCGTCATACAGGCGAGAAAAAAGACAAGTGCACGCAACACGTGGA
GTGTCCTGGACTGTTGTCCATGGCAAATAGCGGGCCAAACACGAACGGCT
GTCAGTTCTTCGTGACGACGGCGAAGGCAGCCTGGCTCGACGGCCTCCAC
GTGGTGTTCGGAAAGGTGTTGGATCCAGCATCTATGCTCACGGTGAGGAA
AATCGAGAACGTCTCCACCGGGGTGAACAACAAGCCCCGACTCACCGTCG
TCATCCAGGAGTGCGGAGAGCTCTAA
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