mRNA_Ecto-sp13_S_contig17325.5173.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 555 bits (1430), Expect = 1.700e-190 Identity = 268/312 (85.90%), Postives = 279/312 (89.42%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLSRCGCLGYSLKRLRD-DLPHHVRH--RRXXXXLRRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
AFTEIPRVF+NNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADM+KAFPWPTCTSHYDLATGYSDFYSWVWQSL +PHGPVHIWVGGVLDC+ETYERIEGLVGK+AASQLA QSF HRKNLYRDGIFKCDGRADVAQSS+EVMLSRCGCLGY+L D + +H TKRQVVEAICTTTLVDGDH QASSSLDPSFWSTHPTMERLWMY+VLTGQITDWSWPD DVT T DGTVVTESLSEY ESCFGHHGSDVFPF LLDTDTDGFE+KTGISFNSATGNELTNREAL AFD
Sbjct: 400 AFTEIPRVFENNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMEKAFPWPTCTSHYDLATGYSDFYSWVWQSLYDPHGPVHIWVGGVLDCEETYERIEGLVGKIAASQLAEQSFIHRKNLYRDGIFKCDGRADVAQSSEEVMLSRCGCLGYNLTEGNDYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFD 711
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 405 bits (1041), Expect = 8.450e-132 Identity = 198/313 (63.26%), Postives = 233/313 (74.44%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLS-RCGCLGYSLKRLRDDLPHHVRHRRXXXXLRRF---TKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
A+TEIP++ N+PG ++ DVY KLRAPWNVNDR YLTRGMG++C A + + +PWPTC +HYDLATGYSDFYSWVW SL +PHGPVHIW+GGVLDC++T+ I LVG A LA SF HRKNL+RDGIF C G A V Q+ EV+ S +CGC GY L + D + + F KRQVV A+CTTT+ DGDH QASSSLDPSF++THPTMERLWMY VLTGQITD++WPD+DVT T DGTV ESLS YGE+C GH GSDVFPF +LD+DTDGFEVKTG+ GN LTNRE L AFD
Sbjct: 414 AYTEIPKMKVNDPGAVEPDVYSKLRAPWNVNDRPYLTRGMGKMCDAKVDEWYPWPTCETHYDLATGYSDFYSWVWYSLYDPHGPVHIWIGGVLDCEKTFGAIAELVGPSIAEDLALYSFIHRKNLFRDGIFSCVGSATVVQAPAEVLSSGQCGCRGYDLTQGDDYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVK-GMENGNTLTNRELLQAFD 725
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 398 bits (1022), Expect = 2.660e-129 Identity = 191/313 (61.02%), Postives = 223/313 (71.25%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLS-RCGCLGYSLKR---LRDDLPHHVRHRRXXXXLRRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
AFT IPR+ NNPG + DVY KLRAPWNVNDR YLTRGMG +CG +PWPTC +HYDLAT Y DFYS+VW SL +PHGPVHIW+GGVLDC++TY I LVG+ AA +LA SF HRKNLYR+GIF+C G A V Q +E++ + +CGCLGY L + +D + KR+V IC T DGDH QASSSLDPSFW THPTMERLWMY +LTG ITD++WPD DVT T DGTV ES+S YG++C GH GSDVFPF LLD+DTD F +KTGI N TGN+LTNRE L AFD
Sbjct: 379 AFTPIPRMEVNNPGELTPDVYLKLRAPWNVNDRAYLTRGMGNMCGIPTSNTYPWPTCETHYDLATSYKDFYSYVWDSLYDPHGPVHIWIGGVLDCEQTYTTIRNLVGEEAAGELAMFSFVHRKNLYREGIFQCSGTAGVGQKPEEILSTGQCGCLGYDLTQGTDYQDIFDRLTMADSIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFD 691
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 358 bits (920), Expect = 4.490e-114 Identity = 172/315 (54.60%), Postives = 221/315 (70.16%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYE-RIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLSR-CGCLGYSLKRLRDDLP---HHVRHRRXXXXLRRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNS-ATGNELTNREALHAFD 927
A IP++ + NP I+ DVY KLR+PWNVNDR+Y++RGMG++C A + +PWPTC SHY+LAT ++DFYSWVW+SL +PHGPVHIW+GGV+DC+ETY IE LVG+ A LA +F HRK+++RDGIF C+G V +S EV+ S CGC GY L + D L V + TKR++V +C+T + +GDH Q+SSSLDPSFWSTHPTMERLWMY VLTGQ+TD+ WPD DVT T DGT ++ +S+Y E C GH GSDVFPF +L + + F V+TGI + GN +TNRE L AFD
Sbjct: 360 ANVPIPKMREGNPSKIEPDVYSKLRSPWNVNDRRYISRGMGQMCHARAETFYPWPTCESHYNLATSFTDFYSWVWESLYDPHGPVHIWIGGVMDCEETYGVDIEHLVGEETALDLALMAFVHRKDMFRDGIFSCEGSVAVTESPDEVLESGVCGCHGYDLTQGDDYLQIFESMVFMKELMGDSDENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFD 674
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 323 bits (827), Expect = 3.350e-101 Identity = 155/314 (49.36%), Postives = 203/314 (64.65%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLS-RCGCLGYSLKRLRDDLPHHVRHRRXXXXL----RRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
A TEIP + +PG + DVYG LR+ W VN YLTRG+G+LC + + WP+C H++L Y DFYSWV +S+ PHGPVH W+GGVL+C++T I LVG+ A+ L+ +F RKNL+RDG F C+G A V + E++LS +CGCLGY L + D + + TKRQVV A+C +T+ DGDH A SSLDP+FW HPTMERL+M+ LTGQ+TD+ WPD + + + DG V E+ S YG++C GH GSDVFPF LLD D D F++KTG+ N TGN+LTNRE L D
Sbjct: 338 ARTEIPAMDLGSPGELIPDVYGLLRSRWTVNSSPYLTRGLGKLCDGSVLDTYAWPSCEEHHNLVMDYDDFYSWVSESMYSPHGPVHTWIGGVLNCEDTISSISSLVGEKNANSLSLNTFDQRKNLWRDGFFACEGSAAVGAPADELLLSGKCGCLGYDLNQGDDWKTIYTNSTLDFDDVIGDYDDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLD 651
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 321 bits (823), Expect = 1.770e-100 Identity = 152/314 (48.41%), Postives = 206/314 (65.61%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLS-RCGCLGYSLKRLRDDLPHHVRHRRXXXXL----RRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
A TEIP + ++PG + DVYG LR+ W +N YLTRG+G+LC + + WP+C H++L Y DFYSWV +S+ PHGPVH W+GGVL+C++T + LVG+ A+ L+ ++F RKNL+RDG F+C+G A V + E++ S +CGCLGY L + D + + TKRQVV A+C +T+ DGDH A SSLDP+FW+ HPTMERL+M+ LTGQ+TD+ WPD + + T DG +V E+ YG++C GH GSDVFPF LLD D D F++KTG+ N TGN+LTNRE L D
Sbjct: 340 ANTEIPAMDPSSPGELIPDVYGLLRSRWTINSSPYLTRGLGKLCDGSVVDTYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHGPVHTWIGGVLNCEDTISSVSSLVGEKNANSLSLKTFDQRKNLWRDGFFECEGSAAVGTPADELLSSGKCGCLGYDLSQGDDWKTIYTNSTVDFDDVIGDYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDGNIVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLD 653
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 321 bits (822), Expect = 1.170e-99 Identity = 157/316 (49.68%), Postives = 197/316 (62.34%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGA-DMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLS-RCGCLGYSLKRLRDDLP-----HHVRHRRXXXXLRRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
A+T++P ++ NPG ++ DVYG LR+ WNVN YLTRGMG LC D+ + +PWPTC HY +AT YSDFYSWVW S+ PHGPVH W+GGVL+C+ET + GLVG+ A+ LA +F RKN +RDG F C+G A+ + +V + CGCLG+ L DD + TKR VV +C +T+ DGDH QA SSLDP+FW HPTMERL+M+ LTG D WPD D + E +S YG+ C GH GSDVFPF LLD+D DGFE+KTG+ N GN TNRE L A D
Sbjct: 374 AYTKMPAMYPGNPGDLNPDVYGLLRSRWNVNSSPYLTRGMGTLCNTYDVTQIYPWPTCELHYWMATEYSDFYSWVWTSMYAPHGPVHTWIGGVLNCEETMASVSGLVGEENANSLALYAFDQRKNFWRDGFFDCEGTAEAGATEDDVFSAGMCGCLGFDLSSNSDDWQTIYYNSTIDFDNVISDYDDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPD-------ADASSSNEMISRYGDDCVGHGGSDVFPFNLLDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMD 682
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 309 bits (791), Expect = 1.120e-97 Identity = 150/314 (47.77%), Postives = 201/314 (64.01%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLS-RCGCLGYSLKRLRDDLPHHVRHRRXXXXL----RRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
A TEIP + +PG + DVYG LR+ W VN YLTRG+G+LC + + WP+C H++L Y DFYSWV +S+ PH PVH W+GGVL+C++T I LVG+ A+ L+ +F RK+L+RD F C+G A V + E++ S +CGCLGY L + D + + TKRQVV A+C +T+ DGDH A SSLDP+FW HPTMERL+M+ LTGQ+TD+ WPD + + + DG V E+ S+YG++C GH GSDVFPF LL+ D GF++KTG+ N TGN+LTNRE L D
Sbjct: 167 ARTEIPAMDPGSPGELIPDVYGLLRSRWIVNSSPYLTRGLGKLCDGSVVDMYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHAPVHTWIGGVLNCEDTISYISSLVGEKNANSLSLNTFDQRKSLWRDDFFACEGSAAVGAPADELLSSGKCGCLGYDLSQGDDWKTIYTNSTLDFDDVIGDYDDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLD 480
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 293 bits (749), Expect = 3.250e-89 Identity = 149/314 (47.45%), Postives = 185/314 (58.92%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRDGIFKCDGRADVAQSSKEVMLS--RCGCLGYSLKRLRDDLPHHVRHRRXXXXLRRF---TKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNSATGNELTNREALHAFD 927
A +EIP+V NNPG ++ DVYGKLRAPWN NDR YLTRG+G+LC + + WPTC +HY+L TG+ FY WVW S+ PH P+H+W+GG +DC TYE I LVG +A++ ++LS +CGC GY L + D + F T+R+VVE +CT + G H+Q+SSS DP FW HPTMERL+ + VLTG I D+ W D D T DGT V+E S Y + C GHHGSDVFP+ LLDTDTDGFEVKTGI GN LTNRE L A D
Sbjct: 369 AKSEIPKVRDNNPGGLEPDVYGKLRAPWNTNDRAYLTRGLGQLCQLNTDQLLAWPTCQTHYELTTGFHTFYDWVWDSMKAPHAPLHLWLGGTMDCAGTYEAIGELVGN-----------------------------SIAETLTLLLLSSGQCGCHGYDLTQGSDYKIVMESMEYLEDLIGDFDDTTQRKVVETLCTGVVNFGSHTQSSSSYDPLFWPIHPTMERLYQFPVLTGSIDDFFWTDADTNVTFADGTTVSEITSVYSDHCIGHHGSDVFPYYLLDTDTDGFEVKTGIRGQPILGNMLTNREILAALD 653
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Match: A0A6H5KGP3_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP3_9PHAE) HSP 1 Score: 271 bits (694), Expect = 2.420e-82 Identity = 136/302 (45.03%), Postives = 180/302 (59.60%), Query Frame = 1
Query: 1 AFTEIPRVFQNNPGLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVGGVLDCKETYERIEGLVGKMAASQLAAQSFTHRKNLYRD----GIFKCDGRADVAQSSKEVMLSRCGCLGYSLKRLRD-----DLPHHVRHRRXXXXLRRFTKRQVVEAICTTTLVDGDHSQASSSLDPSFWSTHPTMERLWMYIVLTGQITDWSWPDEDVT*TMRDGTVVTESLSEYGESCFGHHGSDVFPFVLLDTDTDGFEVKTGISFNS 879
A +EIP V NNPG ++ DVYGKL+APWN NDR YLTRG+G+LC + + PWPTC +HY+L TG FY WVW S++ P P+H+W+GG +DC TYE I LVG ++ + + FT I + R + + + +CGC Y L + D + ++ L T+R+VV A+CT + G HSQ+SS+ DP FW THPTM RL+ + VLTG I D+ W D D+ T DGT V+E S Y + C GHHGSDVFP+ LLDTDTDGFEV +S+ S
Sbjct: 240 AKSEIPMVRDNNPGGLEPDVYGKLQAPWNTNDRAYLTRGLGQLCQLNTNQLLPWPTCQTHYELTTGSHTFYDWVWNSMHAPDAPLHLWLGGTIDCAGTYEAIAELVGTLSRRRSRSWRFTTAGTCTATTCVASIPRALARMITGRFMQLLSSGQCGCHSYGLAQGSDYKIVIESMEYLED--LIGELDDTTQRKVVGALCTGMVNLGSHSQSSSTYDPLFWPTHPTMGRLYQFPVLTGSIDDFCWTDADINVTFADGTTVSEITSVYSDHCVGHHGSDVFPYFLLDTDTDGFEVANSLSYVS 539 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17325.5173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17325.5173.1 >prot_Ecto-sp13_S_contig17325.5173.1 ID=prot_Ecto-sp13_S_contig17325.5173.1|Name=mRNA_Ecto-sp13_S_contig17325.5173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp MGELCGADMQKAFPWPTCTSHYDLATGYSDFYSWVWQSLNEPHGPVHIWVback to top mRNA from alignment at Ecto-sp13_S_contig17325:2..2415+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17325.5173.1 ID=mRNA_Ecto-sp13_S_contig17325.5173.1|Name=mRNA_Ecto-sp13_S_contig17325.5173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17325:2..2415+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17325:2..2415+ >mRNA_Ecto-sp13_S_contig17325.5173.1 ID=mRNA_Ecto-sp13_S_contig17325.5173.1|Name=mRNA_Ecto-sp13_S_contig17325.5173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17325:2..2415+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |