mRNA_Ecto-sp13_S_contig17319.5169.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A6H5K691_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K691_9PHAE) HSP 1 Score: 359 bits (922), Expect = 1.900e-117 Identity = 178/184 (96.74%), Postives = 180/184 (97.83%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
D+INFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEV+ALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHG GMWGAYPDAVLP LGV EGGQTSTGS IAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV
Sbjct: 163 DFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVIALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGSGMWGAYPDAVLPGLGVAEGGQTSTGSVIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 346
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: D7FTM7_ECTSI (Xylulose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM7_ECTSI) HSP 1 Score: 308 bits (789), Expect = 4.040e-103 Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSG 474
D+INFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALG VVGGISA AAQHLGLPEG+PVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLP LGVVEGGQTSTGS IAWFRRLVSG
Sbjct: 163 DFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGSVVGGISAAAAQHLGLPEGIPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSGIAWFRRLVSG 320
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A835YTS4_9STRA (Glycerol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS4_9STRA) HSP 1 Score: 254 bits (650), Expect = 3.280e-77 Identity = 129/184 (70.11%), Postives = 150/184 (81.52%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
D++N RLTGRMVAS+NNASIRWHY + GWP SLL LDL+DL KWPQE++ LG V+GG++ +AA HLGLPEGLPVAQGGADAFVG++GLGVVN GEMALLTGSSHLHLGL DR + G GMWG+Y DAVL L VVEGGQTSTGS AWFR++V G + VSY+ L+ EA AVP GCEGL+
Sbjct: 171 DFMNLRLTGRMVASINNASIRWHYCSKRGWPTSLLAALDLSDLMEKWPQEMLELGAVIGGLTRDAAAHLGLPEGLPVAQGGADAFVGILGLGVVNPGEMALLTGSSHLHLGLV-DREISGGGMWGSYSDAVLHGLYVVEGGQTSTGSVAAWFRKIVGG---DSVSYQELDAEAAAVPPGCEGLL 350
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A2P6TT72_CHLSO (Glycerol kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT72_CHLSO) HSP 1 Score: 249 bits (637), Expect = 1.680e-75 Identity = 129/186 (69.35%), Postives = 149/186 (80.11%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTH--GWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
D+INF LTGR ASVNN SIRWHYST GWP+S+L+KL L LQ KWPQEV+ LG VVGG++A AA HLGLPEGLPVAQGGADA +GMVGLGV+ G++ALLTGSSHLHLG+T D+ HG G+WG YPDA+LP + +VEGGQTSTGSA+AW+RRLV GE Y LNEEA AVP GCEG+V
Sbjct: 163 DFINFHLTGRWCASVNNVSIRWHYSTQRPGGWPISMLQKLGLEALQQKWPQEVLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADADIGMVGLGVIRPGQLALLTGSSHLHLGVT-DKVFHGKGIWGVYPDAILPGVHMVEGGQTSTGSAVAWYRRLV---GEP--DYAALNEEAAAVPPGCEGVV 342
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A2P6VDM7_9CHLO (Glycerol kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDM7_9CHLO) HSP 1 Score: 245 bits (625), Expect = 1.220e-73 Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTH--GWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
DY+NF LTGRMVASVNNASIRWHYST GWP LL+ + L LQ KWPQEV+ LG VVGG++ AA HLGLPEGLPVAQGGADA +GM+GLGV+ G++ALLTGSSHLHLG+T D+ HG G+WG YPDA+LP + +VEGGQTSTGSA+AW R+LV G Y+ LN EA AVP GCEGL+
Sbjct: 162 DYLNFNLTGRMVASVNNASIRWHYSTQRPGGWPTGLLKAIGLEGLQAKWPQEVLPLGAVVGGLTPAAAAHLGLPEGLPVAQGGADADIGMIGLGVIKPGQLALLTGSSHLHLGVT-DKIFHGRGIWGVYPDALLPGVHMVEGGQTSTGSAVAWLRKLVGEPG-----YEALNAEAAAVPPGCEGLL 341
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: E1ZGK8_CHLVA (Glycerol kinase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGK8_CHLVA) HSP 1 Score: 230 bits (586), Expect = 5.650e-68 Identity = 124/194 (63.92%), Postives = 146/194 (75.26%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTH--GWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMV--------GLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
D++NF LTGR VAS+NNASIRWHYST GWP +L L L L KWP EV+ LG VVGG++A AA+HLGLP+G+ VAQGGADA +GMV GLGV+ G++ALLTGSSHLHLG+T D+ HG GMWG YPDA+LP + VVEGGQTSTGSA+AW+RRLV GEE Y+ LN EAEAV GCEG+V
Sbjct: 166 DFVNFHLTGRWVASLNNASIRWHYSTRRAGGWPEGMLRTLGLEALLHKWPAEVLPLGAVVGGLTAAAAEHLGLPQGVVVAQGGADADIGMVRSGGGGGIGLGVIRPGQLALLTGSSHLHLGVT-DQVFHGKGMWGVYPDALLPGVHVVEGGQTSTGSAVAWYRRLV---GEE--GYEALNREAEAVAPGCEGVV 353
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A545STC5_9PROT (Carbohydrate kinase n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545STC5_9PROT) HSP 1 Score: 222 bits (565), Expect = 3.800e-67 Identity = 115/185 (62.16%), Postives = 138/185 (74.59%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTHG-WPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
DYINF LTGR VAS+NNA++RWHY G + SLLEKL L LQ KWPQEV+ LG V+GG+++ AA+HLGL E LPVAQGGADAF+ M+GLGVV G+MA +TGSSHLHLGL D HG G+WG Y DA+LP VVEGGQTSTGS +AW +RL+ + VSY LN EA A+P G +GL+
Sbjct: 163 DYINFHLTGRRVASINNAAVRWHYMAEGGGYQSSLLEKLGLGALQEKWPQEVLPLGEVIGGLTSRAAEHLGLQEALPVAQGGADAFIAMIGLGVVRPGKMAFITGSSHLHLGLA-DHAFHGQGIWGTYADALLPGYHVVEGGQTSTGSIVAWLKRLL----DPAVSYDQLNAEAAALPPGSDGLI 342
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A7C7KPM4_9PROT (Carbohydrate kinase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KPM4_9PROT) HSP 1 Score: 220 bits (560), Expect = 2.540e-66 Identity = 113/185 (61.08%), Postives = 138/185 (74.59%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHY-STTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
DY+N+ LTGR VAS+NNA+IRWHY + G+ LL KL + L KWP EV+ LG V+GG++A AA+HLGLP+ LPVAQGGADAF+GM+GLGVV G +A LTGSSHLHLGL+ + HG G+WG Y DAV+P L VVEGGQTSTGS + WFR L+ GG VSY LN EA+ +P G EGL+
Sbjct: 165 DYLNYHLTGRRVASINNAAIRWHYLAADGGFQPGLLAKLGIDALMDKWPSEVLPLGAVIGGLTARAAEHLGLPKDLPVAQGGADAFIGMIGLGVVRPGSLAFLTGSSHLHLGLS-EMAFHGAGIWGTYADAVIPGLHVVEGGQTSTGSVVKWFRDLLGGG----VSYDDLNAEAKDLPPGSEGLI 344
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A512DVM5_9PROT (Carbohydrate kinase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DVM5_9PROT) HSP 1 Score: 219 bits (559), Expect = 2.710e-66 Identity = 106/184 (57.61%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 552
DYINF LTGRMVA++ +AS RWHY + G+ LL+KL+L L +WP+EV+ LG V+GG++ AA HLGLP G+PVAQGG+DAF+GM+G+GVV +A++TGSSH HLG T D +HG G WG YPDAV+P L +EGGQTSTGS I WF++L+ G ++Y+ LN EA A+P G EGLV
Sbjct: 163 DYINFHLTGRMVANITSASTRWHYDSRTGYATGLLDKLNLKALLDRWPREVLPLGTVIGGLTTAAADHLGLPAGIPVAQGGSDAFIGMIGMGVVQPNRLAMITGSSHNHLGFT-DTEVHGAGFWGTYPDAVIPGLHAIEGGQTSTGSIINWFKKLIDSG----ITYEQLNAEASALPPGSEGLV 341
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Match: A0A250WUX7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WUX7_9CHLO) HSP 1 Score: 226 bits (575), Expect = 2.770e-66 Identity = 114/183 (62.30%), Postives = 139/183 (75.96%), Query Frame = 1
Query: 1 DYINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPELGVVEGGQTSTGSAIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGL 549
DYINFRLT RM ASVNNAS+RWHYST GWP SLL+ L +++L KWPQE++A G VG + ++AA HLGL EG +AQGGADAF+GM+GLGVV G++ALLTGSSHL LG+ +HG G++G YPDAVLP VVEGGQTSTGS + WF+R++ + V Y L+ EA AVPIGCEGL
Sbjct: 166 DYINFRLTDRMCASVNNASVRWHYSTARGWPSSLLKSLGISELLSKWPQELLAPGEAVGKLHSDAAHHLGLLEGTLLAQGGADAFIGMLGLGVVKPGQLALLTGSSHLQLGIASSE-MHGQGIFGTYPDAVLPGAHVVEGGQTSTGSIVNWFKRVIL---DSTVEYGVLDREASAVPIGCEGL 344 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17319.5169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17319.5169.1 >prot_Ecto-sp13_S_contig17319.5169.1 ID=prot_Ecto-sp13_S_contig17319.5169.1|Name=mRNA_Ecto-sp13_S_contig17319.5169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp MVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGback to top mRNA from alignment at Ecto-sp13_S_contig17319:23..3199+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17319.5169.1 ID=mRNA_Ecto-sp13_S_contig17319.5169.1|Name=mRNA_Ecto-sp13_S_contig17319.5169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17319:23..3199+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17319:23..3199+ >mRNA_Ecto-sp13_S_contig17319.5169.1 ID=mRNA_Ecto-sp13_S_contig17319.5169.1|Name=mRNA_Ecto-sp13_S_contig17319.5169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=522bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17319:23..3199+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |