mRNA_Ecto-sp13_S_contig1731.5164.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1731.5164.1
Unique NamemRNA_Ecto-sp13_S_contig1731.5164.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: A0A6H5KZ47_9PHAE (CAP10 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ47_9PHAE)

HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0
Identity = 488/496 (98.39%), Postives = 493/496 (99.40%), Query Frame = 1
Query:    1 MEATSGPSLRGLFDKDDDSVHPLVNNSIFKACPAGMRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGVKEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPRETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSHQVNKEGEVEIDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            MEATSGPSLRGLFDKDDDSVHPLVNNSIFKACPAGMRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLG+AEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALG+KEE LQDYYRKKEESYRKENVI+GVENWWANGNIICNEHQRPRETNSQYWGDHFN+PLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPS TPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSHQVNKEGEVEIDEPRDLFTQENF KFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQS+EWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK
Sbjct:    1 MEATSGPSLRGLFDKDDDSVHPLVNNSIFKACPAGMRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGDAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGIKEENLQDYYRKKEESYRKENVIQGVENWWANGNIICNEHQRPRETNSQYWGDHFNSPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSLTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSHQVNKEGEVEIDEPRDLFTQENFKKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSFEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 496          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: D8LTE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTE2_ECTSI)

HSP 1 Score: 578 bits (1491), Expect = 1.980e-205
Identity = 267/272 (98.16%), Postives = 270/272 (99.26%), Query Frame = 1
Query:  106 MRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGVKEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPRETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDR 921
            MRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGR+LGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGVKEE LQDYYRKKEESYRKENVI+GVENWWANGNIICNEHQR RETNSQYWGDHFN+PLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDR
Sbjct:    1 MRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRQLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGVKEENLQDYYRKKEESYRKENVIQGVENWWANGNIICNEHQRLRETNSQYWGDHFNSPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDR 272          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: A0A835YS34_9STRA (Glycosyl transferase family 90-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS34_9STRA)

HSP 1 Score: 547 bits (1410), Expect = 3.540e-186
Identity = 283/517 (54.74%), Postives = 346/517 (66.92%), Query Frame = 1
Query:   25 LRGLFDKDDDSVHPLVNNSIFKACPAGM-RFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAE---------VLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGA--LGVKEE----TLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPRETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSHQVN-KEGEVEIDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHN---GKGSSPSDG---------GGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            LRGL+D  DD V   V+NSIFK  P G+ RF+TK +CK F+ +HC  GSNPDYP +Q +FT LV+W Q+E+YL   +    +K P R A  +D  +NV+L   + SG  P   E         V+  VRKRLDL FH             ++  ST NTL+YL+HHMRCGI V+IR+ +LV+F PF NKDY+NDW     L +K +    T ++YY  K + +R EN+I+    WWANGNIICNEHQRP E  SQYWGD F + LRD++E+ C+   VADCEFFINKRDYP LK++     PVEPYGFI+DKDDRDP QDVPLKRH+Y  +TPI SFYCS+RFADIPFP SEDWEAA G V+PKTF+H+ N K  EVEIDEPRDLFTQENF KF+C W DK +TAFFRGTATGGG T ETNQRL  A  S+EW+S P      G+                 G+  T P LD+AI GWN RDKKI  + M +L  +  PF GG+ENFTPIY+QSK+K
Sbjct:   28 LRGLYDFTDDEVDEDVDNSIFKEVPGGLLRFDTKAECKAFMMKHCTVGSNPDYPHLQHMFTMLVSWHQIEKYLLSKIDYFNRKYPPRPAPTIDCSKNVYL--QQDSGRGPEGVEGWGDFDAARVMRDVRKRLDLRFH-----------QCITSVSTRNTLQYLYHHMRCGIYVMIRHGKLVMFIPFVNKDYSNDWGQPPRLPLKPDGTPMTQKEYYVDKAQVFRPENIIQDYGQWWANGNIICNEHQRPGEKFSQYWGDQFMSALRDLLEETCARGGVADCEFFINKRDYPHLKYSAQKQVPVEPYGFIFDKDDRDPSQDVPLKRHKYKCYTPIASFYCSDRFADIPFPPSEDWEAAVGKVYPKTFTHKYNSKTKEVEIDEPRDLFTQENFVKFKCAWEDKVDTAFFRGTATGGGVTVETNQRLKSASLSHEWKSDPSGQFACGRXXXXXXXXXXXXXXRYNGTDGTAPYLDSAITGWNKRDKKIHSEPMMYLKDSDFPFAGGKENFTPIYEQSKYK 531          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: A0A5D6XM96_9STRA (CAP10 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM96_9STRA)

HSP 1 Score: 463 bits (1192), Expect = 8.270e-154
Identity = 247/520 (47.50%), Postives = 316/520 (60.77%), Query Frame = 1
Query:   19 PSLRGLFDKDDDSVHPLVNNSIFKACPAG--MRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGV--KEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEH--QRPRETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSH----------QVNKEGEVE--------------IDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            P LRG+F  +D+   P     +  A  AG   +F TK +C+ F+R HC  GSNPDYP +Q +F+ LV W Q+E  L P + +  K+ P    A ++PD     GE            V  GV  R++LPFH      + R        ST NTL+YLFHHMRCGI V+IR +R+V+F PFANKDY N+W   +     + ++  YY++K   YR+EN+I     WWANGNIICNEH   R +E  +QYWGD F   LRDM+E AC  R++ DCEFFINKRDYP LK N +     EPYGF++DKDDR+P  D+PL R +Y ++ PI+SFY SERFADIPFP SEDWEAATG+VFP++F H          + N + + E              ++EPRDLFT  NF KF   W +K +TAFFRG+ATGGGTT ETNQRL +A  S  W+S P  NG      D G      PLL+A +  WNLRDKKIAG+ M FL    + F+ GR++F PIY+QS FK
Sbjct:    5 PMLRGVFAFEDEET-PEWRRVVLDADGAGGVPKFATKSECETFIRRHCARGSNPDYPNLQHVFSMLVDWHQIESILIPKIEEYDKRFPAEPPAEMNPDNRFMHGEG---------VGVAEGVASRVNLPFH----RKTNRE-------STYNTLKYLFHHMRCGIFVMIRRRRVVLFVPFANKDYENNWGDNVKFDSSDGSMFQYYKEKRNYYRRENIINDPRKWWANGNIICNEHCRYRDKEHETQYWGDQFLTQLRDMLEDACKHRNIPDCEFFINKRDYPHLKENLS-----EPYGFLFDKDDREPADDIPLTRFKYATYAPIMSFYVSERFADIPFPCSEDWEAATGLVFPQSFKHTHCDACPCRDKENCQNDWECFCELKPGQKKRHGVEEPRDLFTASNFRKFYKPWDEKVDTAFFRGSATGGGTTVETNQRLQLAHLSNLWKSDPARNGD-----DAGDGV---PLLNAEVTTWNLRDKKIAGKPMTFLRTEGLNFEAGRQHFIPIYEQSVFK 490          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: A0A6A3JFV2_9STRA (CAP10 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JFV2_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 3.650e-152
Identity = 245/519 (47.21%), Postives = 313/519 (60.31%), Query Frame = 1
Query:   19 PSLRGLFDKDDDSVHPLVNNSIFKACPAGM-RFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDW--DGALGVKEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPR--ETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSH----------------------QVNKEGEVE--IDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            P LRG+F  +D+   P     +      G+ +F TK +C+ F+R+HC  GSNPD+P +Q +F+ LV W+Q+ + L P + +  KK P      +        GE  P  E          V  R+++PFH      + R        ST NTL YLF HMRCGI V+IR +R+V+FAPFANKDY N+W  +      + ++  YYR+K+  YR+EN+I  V  WWANGNIICNEH R R  E  +QYWGD F   LRDM+E AC  R++ADCEFFINKRDYP LK N +     EPYGF++DKDDR+P+ D+PL  HRY ++ PI+SFY S+RFADIPFP SEDWEAATG+VFP++F H                       V   G     I+  RDLFT  NF KF   W DK +TAFFRG+ATGGGTT ETNQRL +A  S  W+  P  NG+    + G   A   PLL+A +  WNLRDKKIAG+ M FL      F+GGR++F PIY+QSKFK
Sbjct:    5 PMLRGIFAFEDEET-PEWRRVVMSETSGGVPKFATKAECEDFIRKHCWRGSNPDFPKLQHVFSMLVDWQQITEILIPKIEEYDKKFPLESTPEVSDSNRFAQGEGLPIAE---------DVDYRVNMPFH----QRTNRE-------STFNTLHYLFFHMRCGIFVMIRRRRVVIFAPFANKDYENNWGENVTFDSSDGSMFAYYREKQRYYRRENIIPDVNKWWANGNIICNEHCRYRNKEDETQYWGDQFLTQLRDMLEDACKHRNIADCEFFINKRDYPHLKENLS-----EPYGFLFDKDDRNPDDDIPLTEHRYATYAPIMSFYVSKRFADIPFPCSEDWEAATGLVFPQSFRHTHCDQCPCRNPTHCDNDWECFCDVGANGRKRHGIEGARDLFTASNFRKFYKPWEDKVDTAFFRGSATGGGTTIETNQRLHLAHLSNTWKKDPTMNGEAEKEAAGDEGAELVPLLNAEVTTWNLRDKKIAGKPMTFLRNEDFIFEGGRQHFIPIYEQSKFK 497          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: A0A0W8DJD6_PHYNI (CAP10 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DJD6_PHYNI)

HSP 1 Score: 461 bits (1185), Expect = 8.660e-152
Identity = 245/519 (47.21%), Postives = 319/519 (61.46%), Query Frame = 1
Query:   19 PSLRGLFDKDDDSVHPLVNNSIFKACPAGM-RFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDW--DGALGVKEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPR--ETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSH----------QVNKEGEVE--------------IDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            P LRG+F  +D+   P     +      G+ +F TK +C+ F+R+HC  GSNPD+P +Q +F+ LV W+Q+++ L P + +  +K P   A  +  D     GE  P         +   V  R+++PFH      + R        ST NTL YLF HMRCGI V+IR +R+V+FAPFANKDY N+W  +      + ++  YYR+K+  YR+EN+I  V+ WWANGNIICNEH R R  E  +QYWGD F   LRDM+E AC  R++ DCEFFINKRDYP LK N +     EPYGF++DK+DR+P++D+PL  HRY ++ PI+SFY S+RFADIPFP SEDWEAATG+VFP++F H           V+ E + E              I+  RDLFT  NF KF   W DK  TAFFRG+ATGGGTT ETNQRL +A  S  W+     NGK  S +  GG     PLL+A +  WNLRDKKIAG+ M FL      F+GGR++F PIY+QSKFK
Sbjct:    5 PMLRGIFAFEDEET-PEWRRVVMSETSGGVPKFATKAECEDFIRKHCWRGSNPDFPKLQHVFSMLVDWQQIKEILIPKIEEYDQKFPLEPAPQISADNRFVQGEGLP---------IANDVDYRVNMPFH----QQTNRE-------STHNTLHYLFFHMRCGIFVMIRRRRVVIFAPFANKDYENNWGQNVTFDSSDGSMFAYYREKQRYYRRENIIPDVKKWWANGNIICNEHCRYRNKEDETQYWGDQFLTQLRDMLEDACKHRNIPDCEFFINKRDYPHLKENLS-----EPYGFLFDKNDRNPDEDIPLTEHRYSTYAPIMSFYVSKRFADIPFPCSEDWEAATGLVFPQSFRHTHCDQCPCRNSVHCENDWECFCDVGANGRKRHGIEGARDLFTANNFRKFYKPWEDKVNTAFFRGSATGGGTTIETNQRLHLAHLSNTWKKDSTMNGKTESDA-AGGDQELVPLLNAEVTTWNLRDKKIAGKPMTFLRHEEFIFEGGRQHFIPIYEQSKFK 496          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: M4BXL6_HYAAE (CAP10 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXL6_HYAAE)

HSP 1 Score: 459 bits (1182), Expect = 1.730e-151
Identity = 248/521 (47.60%), Postives = 318/521 (61.04%), Query Frame = 1
Query:   19 PSLRGLFDKDDDSVHPLVNNSIFKACPAGM-RFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGV--KEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPR--ETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSH----------QVNKEGEVE--------------IDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTD--PLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            P LRG+F  +D+   P     +     +G+ +F TK +C+ F+R HC  GSNPD+P +Q +F+ LV W+Q+ + L P + +   K P     P+  D      E  P  E         GV  R++LPFH      + R        ST +TL YLF HMRCGI V+IR +R+V+FAPFANK Y N+W   + V   + TL  YYR+K + YR+EN+I  V  WWANGNIICNEH R R  E  SQYWGD F   LRDM+E AC  R++ADCEFFINKRDYP LK N       EPYGF++DK+DR+P++D+PL  H Y ++ PI+SFY S+RFADIPFP SEDWEAATG+VFP++F H           V  E + E              I+  RDLFT  NF KF   W DK  TAFFRG+ATGGGTT ETNQRL +A  S  W+  P  NG+    + GG +A+ +  PLL+A +  WNLRDKKIAG+ + FL      F+GGR++F PIY+QSKFK
Sbjct:    5 PMLRGIFAFEDEET-PEWRRVVMSETSSGVPKFATKTECEAFIRRHCWRGSNPDFPKLQHVFSLLVDWKQITEILLPKIEEYDLKYPVGSTPPVSADNRFARDEGLPIAE---------GVDYRVNLPFH----QQTNRE-------STIHTLHYLFFHMRCGIFVMIRRRRVVIFAPFANKSYVNNWGQHVTVDSSDGTLSAYYREKWQYYRRENIIPDVNKWWANGNIICNEHCRYRNKEDESQYWGDQFLTQLRDMLEDACKHRNLADCEFFINKRDYPHLKENL-----TEPYGFLFDKNDRNPDEDIPLTEHLYATYAPIMSFYVSKRFADIPFPCSEDWEAATGLVFPQSFRHTHCDQCPCRNSVRCENDWECFCKAGANGRKRHGIEGARDLFTANNFQKFYKPWHDKVNTAFFRGSATGGGTTIETNQRLHLAHLSNTWKKDPTMNGEAERDAGGGDNANEELVPLLNAEVTTWNLRDKKIAGKPITFLRHKDFIFEGGRQHFIPIYEQSKFK 499          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: G4YIS5_PHYSP (CAP10 domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YIS5_PHYSP)

HSP 1 Score: 457 bits (1177), Expect = 8.920e-151
Identity = 245/519 (47.21%), Postives = 317/519 (61.08%), Query Frame = 1
Query:   19 PSLRGLFDKDDDSVHPLVNNSIFKACPAGM-RFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDW--DGALGVKEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPR--ETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSH----------------------QVNKEGEVE--IDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            P LRG+F  +D+   P     +      G+ +F TK +C+ F+R+HC  GSNPD+P +Q +F+ LV W+Q+ + L P +++      + +  PL+P   V  G     GE      +   V  R+++PFH      + R        ST NTLRYLF HMRCGI V+IR +R+V+FAPFANKDY N+W  +      + ++  YYR+K+  YR+EN+I  V  WWANGNIICNEH R R  E  +QYWGD F   LRDM+E AC  R++ADCEFFINKRDYP LK N +     EPYGF++DKDDR+P+ D+PL  H Y ++ PI+SFY S+RFADIPFP SEDWEAATG+VFP++F H                       V   G     I+  RDLFT  NF KF   W DK  TAFFRG+ATGGGTT E NQRL +A  S  W++ P  NG+    + G G A   PLL+A +  WNLRDKKIAG+ M FL      F+GGR++F PIY+QSKFK
Sbjct:    5 PMLRGIFAFEDEET-PEWRRVVMSETSGGVPKFATKAECEDFIRKHCWRGSNPDFPKLQHVFSMLVDWQQITEVLIPKIQE------YDQRYPLEPVPEVSHGNRFAQGEG---VPIAEDVDYRVNMPFH----QRTNRE-------STFNTLRYLFFHMRCGIFVMIRRRRVVIFAPFANKDYENNWGENVTFDSSDGSMFAYYREKQRYYRRENIIPDVNKWWANGNIICNEHCRYRNKEDETQYWGDQFLTQLRDMLEDACKYRNIADCEFFINKRDYPHLKENLS-----EPYGFLFDKDDRNPDDDIPLTEHLYATYAPIMSFYVSKRFADIPFPCSEDWEAATGLVFPQSFRHTHCDQCPCRNPTHCDNDWECFCDVGANGRKRHGIEGARDLFTANNFRKFYKPWEDKVNTAFFRGSATGGGTTIEINQRLHLAHLSNTWKNDPTMNGEAERDAAGDGDAELVPLLNAEVTTWNLRDKKIAGKPMTFLRHEDFIFEGGRQHFIPIYEQSKFK 497          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: D0MY59_PHYIT (CAP10 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MY59_PHYIT)

HSP 1 Score: 451 bits (1159), Expect = 1.410e-150
Identity = 241/519 (46.44%), Postives = 315/519 (60.69%), Query Frame = 1
Query:   19 PSLRGLFDKDDDSVHPLVNNSIFKACPAGM-RFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDW--DGALGVKEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPR--ETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSH----------QVNKEGEVE--------------IDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            P LRG+F  +D+   P     +      G+ +F TK +C+ F+R+HC  GSNPD+P +Q +F+ LV W Q+E+ L P + +   K P     P+  D     GE  P         +   V  R+++PFH      + R        ST NTL YLF +MRCGI V+IR +R+V+FAPFANK+Y N+W  +      + ++  YYR+K+  YR+EN+I  V  WWANGNIICNEH R R  E  +QYWGD F   LRDM+E AC  R++ADCEFFINKRDYP LK N +     EPYGF++DKDDR+P+ D+PL +H Y ++ PI+SFY S+RFADIPFP SEDWEAATG+VFP++F H           V+ E + E              I+  RDLFT  NF KF   W DK  TAFFRG+ATGGGTT +TNQRL +A  S  W+     NG+    ++  G     PLL+A +  WNLRDKKIAG+ M FL      F+GGR++F PIY+QSKFK
Sbjct:    5 PMLRGIFAFEDEET-PEWRRGVMSETSGGVPKFATKAECEDFIRKHCWRGSNPDFPKLQHVFSMLVDWHQIEEILMPKIEEYDLKYPLEPTPPVSADNRFAQGEGLP---------IAQDVDYRVNMPFH----QQTNRE-------STYNTLYYLFFNMRCGIFVMIRRRRVVIFAPFANKNYENNWGENVTFDSSDGSMFAYYREKQRYYRRENIIPDVNKWWANGNIICNEHCRYRNKEDETQYWGDQFLTQLRDMLEDACKHRNIADCEFFINKRDYPHLKENLS-----EPYGFLFDKDDRNPDDDIPLTKHLYATYAPIMSFYVSKRFADIPFPCSEDWEAATGLVFPQSFRHTHCDRCPCRNSVHCENDWECFCDVGANGRKRHGIEGARDLFTASNFRKFYKPWEDKVNTAFFRGSATGGGTTIDTNQRLHLAHLSNTWKKDTMMNGE----AERDGDQELVPLLNAEVTTWNLRDKKIAGKPMTFLRHEKFIFEGGRQHFIPIYEQSKFK 493          
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Match: K3WPY4_GLOUD (CAP10 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPY4_GLOUD)

HSP 1 Score: 456 bits (1174), Expect = 2.240e-150
Identity = 239/518 (46.14%), Postives = 314/518 (60.62%), Query Frame = 1
Query:   19 PSLRGLFDKDDDSVHPLVNNSIFKACPAGMRFETKEDCKRFVREHCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLDPDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLSCASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGV--KEETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPR--ETNSQYWGDHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGFIYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAATGMVFPKTFSH----------QVNKEGEVE--------------IDEPRDLFTQENFNKFECDWADKQETAFFRGTATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLLDAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK 1488
            P LRG+F  +D+         +        +F TK +C+ F+R+HC  GSNPDYP +Q +F+ LV W+Q+   L P + +  ++ P      ++ D     GE            V  GV  R++LPFH      + R        ST NTL+YLF HMRCGI V+IR +R+V+F PFANKDY N+W   +     + ++  YYR+K+  YR+EN+I     WWANGNIICNEH R R  +  +QYWGD F   LRDM+E AC  R++ADCEFFINKRDYP LK N +     EPYGF++DKDDR+P+ D+PL  H+Y ++ PI+SFY S+RFADIPFP SEDWEAATG+VFP+TF H          ++N + + E              ++EPRDLFT  NF KF   W +K  TAFFRG+ATGGGTT +TNQRL +A  S  W+  P  NG+     DG       PLL+A +  WNLRDKKIAG+ M FL    + F+GGR++F PIY+QS FK
Sbjct:    4 PMLRGIFAFEDEETPEWRRVVLTDGVGGVPKFATKSECEAFIRKHCWRGSNPDYPMLQHVFSMLVDWKQIRDILIPKIEEYDQRYPAEPPQEINADNRFMHGEG---------IRVTEGVEYRVNLPFH----RQTNRE-------STINTLKYLFFHMRCGIFVMIRRRRVVLFVPFANKDYENNWGDNIKFDSSDGSMHQYYREKQNYYRRENIIPDPRKWWANGNIICNEHCRYRNKQEETQYWGDQFLTQLRDMLEDACKHRNIADCEFFINKRDYPHLKENLS-----EPYGFLFDKDDRNPDDDIPLTDHKYATYAPIMSFYISKRFADIPFPCSEDWEAATGLVFPQTFKHTHCDACPCRDKMNCQNDWECFCEVKPGQKKRHGVEEPRDLFTASNFRKFYKPWEEKVNTAFFRGSATGGGTTIDTNQRLQLAHLSNTWKHDPRLNGE--EAGDGV------PLLNAEVTTWNLRDKKIAGKPMTFLRTEGLNFEGGRQHFIPIYEQSVFK 488          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1731.5164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ47_9PHAE0.000e+098.39CAP10 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LTE2_ECTSI1.980e-20598.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YS34_9STRA3.540e-18654.74Glycosyl transferase family 90-domain-containing p... [more]
A0A5D6XM96_9STRA8.270e-15447.50CAP10 domain-containing protein n=1 Tax=Pythium br... [more]
A0A6A3JFV2_9STRA3.650e-15247.21CAP10 domain-containing protein n=1 Tax=Phytophtho... [more]
A0A0W8DJD6_PHYNI8.660e-15247.21CAP10 domain-containing protein n=2 Tax=Phytophtho... [more]
M4BXL6_HYAAE1.730e-15147.60CAP10 domain-containing protein n=1 Tax=Hyaloperon... [more]
G4YIS5_PHYSP8.920e-15147.21CAP10 domain-containing protein n=7 Tax=Phytophtho... [more]
D0MY59_PHYIT1.410e-15046.44CAP10 domain-containing protein n=1 Tax=Phytophtho... [more]
K3WPY4_GLOUD2.240e-15046.14CAP10 domain-containing protein n=1 Tax=Globispora... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1731contigEcto-sp13_S_contig1731:6213..15333 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score463.0
Seed ortholog evalue1.8e-127
Seed eggNOG ortholog4792.ETI43833
Model size1491
KEGG koko:K13667
KEGG ReactionR09315
KEGG Pathwayko00514,map00514
Hectar predicted targeting categoryother localisation
Exons12
EggNOG free text desc.Putative lipopolysaccharide-modifying enzyme.
EggNOG OGs3Q7VQ@4776,KOG2458@1,KOG2458@2759
Ec32 ortholog descriptionGlycosyl transferase family 90 domain protein
Ec32 orthologEc-02_006000.1
Cds size1491
COG Functional cat.S
CAZyGT90
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1731.5164.1prot_Ecto-sp13_S_contig1731.5164.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1731 6213..15333 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462904.3018796-CDS-Ecto-sp13_S_contig1731:6212..63381681462904.3018796-CDS-Ecto-sp13_S_contig1731:6212..6338Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 6213..6338 +
1681462904.3132195-CDS-Ecto-sp13_S_contig1731:6968..71691681462904.3132195-CDS-Ecto-sp13_S_contig1731:6968..7169Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 6969..7169 +
1681462904.332716-CDS-Ecto-sp13_S_contig1731:8135..82841681462904.332716-CDS-Ecto-sp13_S_contig1731:8135..8284Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 8136..8284 +
1681462904.3449202-CDS-Ecto-sp13_S_contig1731:8869..89801681462904.3449202-CDS-Ecto-sp13_S_contig1731:8869..8980Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 8870..8980 +
1681462904.3542955-CDS-Ecto-sp13_S_contig1731:9315..93791681462904.3542955-CDS-Ecto-sp13_S_contig1731:9315..9379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 9316..9379 +
1681462904.3637779-CDS-Ecto-sp13_S_contig1731:10046..101361681462904.3637779-CDS-Ecto-sp13_S_contig1731:10046..10136Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 10047..10136 +
1681462904.3733394-CDS-Ecto-sp13_S_contig1731:11193..113721681462904.3733394-CDS-Ecto-sp13_S_contig1731:11193..11372Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 11194..11372 +
1681462904.3824627-CDS-Ecto-sp13_S_contig1731:12173..122541681462904.3824627-CDS-Ecto-sp13_S_contig1731:12173..12254Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 12174..12254 +
1681462904.3918216-CDS-Ecto-sp13_S_contig1731:13166..132481681462904.3918216-CDS-Ecto-sp13_S_contig1731:13166..13248Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 13167..13248 +
1681462904.40197-CDS-Ecto-sp13_S_contig1731:13464..135771681462904.40197-CDS-Ecto-sp13_S_contig1731:13464..13577Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 13465..13577 +
1681462904.4124248-CDS-Ecto-sp13_S_contig1731:14378..145481681462904.4124248-CDS-Ecto-sp13_S_contig1731:14378..14548Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 14379..14548 +
1681462904.4217577-CDS-Ecto-sp13_S_contig1731:15208..153331681462904.4217577-CDS-Ecto-sp13_S_contig1731:15208..15333Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1731 15209..15333 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1731.5164.1

>prot_Ecto-sp13_S_contig1731.5164.1 ID=prot_Ecto-sp13_S_contig1731.5164.1|Name=mRNA_Ecto-sp13_S_contig1731.5164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=497bp
MEATSGPSLRGLFDKDDDSVHPLVNNSIFKACPAGMRFETKEDCKRFVRE
HCQEGSNPDYPWMQQIFTTLVTWRQLEQYLFPCLRDIWKKTPFRKAAPLD
PDRNVFLGEAEPSGEWPLHAEVLAGVRKRLDLPFHGGGVDASGRRLGFLS
CASTENTLRYLFHHMRCGILVVIRNKRLVVFAPFANKDYTNDWDGALGVK
EETLQDYYRKKEESYRKENVIEGVENWWANGNIICNEHQRPRETNSQYWG
DHFNAPLRDMIEQACSSRDVADCEFFINKRDYPQLKFNPNSLKPVEPYGF
IYDKDDRDPEQDVPLKRHRYPSFTPIVSFYCSERFADIPFPTSEDWEAAT
GMVFPKTFSHQVNKEGEVEIDEPRDLFTQENFNKFECDWADKQETAFFRG
TATGGGTTRETNQRLAIAWQSYEWESSPEHNGKGSSPSDGGGSASTDPLL
DAAIVGWNLRDKKIAGQEMRFLDPTTIPFKGGRENFTPIYQQSKFK*
back to top

mRNA from alignment at Ecto-sp13_S_contig1731:6213..15333+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1731.5164.1 ID=mRNA_Ecto-sp13_S_contig1731.5164.1|Name=mRNA_Ecto-sp13_S_contig1731.5164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9121bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1731:6213..15333+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGCAACATCAGGGCCAAGTCTCCGGGGTTTGTTCGATAAGGACGA TGACAGCGTACATCCTCTCGTCAACAACAGCATCTTCAAGGCCTGCCCAG CTGGCATGCGGTTCGAGACCAAAGAGGTACAGAAGCGAAGCTGTGTGTGT TGCCTGTAAGAATCGAACCTTCTTGTTCTGTGTTGCCCCGCGTGTGCTGT CTACCCTGCGTAGTTTAGACAAGCCCAGAACGGCCTGCAGTAGGTGACAA AAAAAAACGTACCAGGTTGTTGTTGGTTATTTCCCTGTCGTAACGGAATG TATTATGAGCCCCTTTTACAGCAGCAATGCGATACACGCCGAGTTTTGCA TGTTGAAGGCGTGAGCTGTGCTGACAACCAAACCACAGTCGGTGTTTGTG GACACCAGGTCGAGGGAAGGAATCGTTGATGCCCTTCATCAGCAACTCAC CCTCCGCGAATCGGCGGTTTCAAATGCTTCCGGGGTTATGGTATCTCATG TATGCACCTACGGCATTCGTCTACAGATATGCATGCAGGTACCACATACC TGGTACAATATGTTCTCCGCCACAACCATTACCAAAGCTTGTGGAGCTGA GCCTGCGGAGTCGCAACCCCTCGCTTGAACCAACCAGGCACATCAGCACT GGTATGCATACACATGCAGCAGGAGCCGCCGGCGTTCATCGTTCTCGTCA CAACAACGCCTTTCCTTTCACGCCGTGTGCCCGGCCTTCCCGTACTGCTA CACCAGGACTGTAAGCGGTTCGTCCGGGAGCATTGCCAGGAGGGAAGCAA CCCCGATTACCCCTGGATGCAGCAGATCTTCACCACCCTGGTCACCTGGC GGCAGCTGGAGCAGTACCTCTTCCCCTGCTTGCGCGATATCTGGAAGAAG ACCCCCTTCCGGAAGGCCGCGCCGCTTGACCCCGACCGAAACGTTTTCCT CGGCGAGGTGGGTGTTGGGTGTTGTGCCTGCCACTTTGGATGCAAACGCT GAAATTGTTAAGGGTGCGTAAGGGATGTCGGGGCGAGAGTATTTGCCTCC GCCGCCAGACCAGAAATTGTAGGATGCGTTGGTATCGGTTAGCATCATTC TCGCCGTTTTTTTCGCGGTTTCCTCTGTATTGTTTTGTGGGAACGGGGGT ACTCCTTGTATGGAAATCTGTATCTACAGTACGATGGCAAACACAGCCTT TTGGTGATGCCTTTCTTCTCAGCCCTCCATCCAGATGTAATCACATTCGA CGATTCTATCCCCCTGTTGTGCTATGACCCCTTCCATGCGACGCTTCATT TCTTCGGCCGGCTCTGTCCGCTCGCGGGTTTAACCCGTGCTTGTGGTTTC AAGCTAAATTTCCTTCCGCCCTTATCCATGCGAACGTCACATTGCGCGCG AACAAAGGCCGGATTTTCTTCGTTGCTCCCTGCTGTACTTGGATGCTCGG ATGCTTTGCTTTGGTCGGCAGGGTAGACTTGCATTCCGTTGTATTCCAGG CGCTTCTATGTCGGCAAGGCATGACTTAGAAGAATTGCATATAGTACGAA TCAGGTGAACCCTTGCTGCCGCACACGTACGTGTTGTAGACTCCAAGGCA TGCCTTGGCCGCAACCAGAATCCTTGCGTGGGTCGATGGTTTCCACGAAA CGTTGCTTAACGAAGCCCGCAAGGTGGTGTGCTTTGGCTAGCGGTTTTAG CTGGCCCCCTTCTTGGGTTCTGTACCGCGGTTCCATCCGAATATATCCAC AACGAGAGACGGGTCACAACACAGATTCTCCTCGGCCTCAATGCCTGCTG TAGGTTAGCCTACGTCTGCAACTTGACCCAAGAGTAGCTAGCCTGCATCC ACCACGATTGTAGGTTGTGCGTGCGTGCACAATTCTTGTGTCTGACGATA TCGATATTCCACGTCATGAACAGGCCGAGCCATCGGGAGAGTGGCCGCTG CACGCCGAGGTGTTGGCGGGCGTCAGGAAGCGGCTCGATCTGCCGTTTCA CGGGGGGGGGGTTGACGCTTCGGGAAGGCGGCTGGGGTTTCTATCGTGTG CGTCGACGGAGAACACCCTGAGGTGGGAGTTGGACGCTGCATACGGCGTG TGTGGTTTCTCTCAGGTATTTGTTTGTGTGTGGGTTTTGTTCTTGGGTGT GTGTTTGCTTGGCCTCTGTCGTCGTTCGTAGTGGCGGTCACACGGCACTC CTACACCGTCGTTGTCCCACACTAGAATTTCCCTTCCAGATTTTCCTTCC ACTGCTCGGGAACAGATCACGGTACAGTATACCATGTGCATGATTTGATG GGCAACAAGTTTTGTGGCCCTGTCGAAATACTAATGTAGTTTGTGTCATG TGGAGGTGGGTGGCGGTGCACGGATGCGCGCCCGGAAGACATGCGAGACT GTTGCCGTACAGTAACGGGTGCAAAACTGCTGATACCCTGCAAGGAGTAC CCACTTCCCATCAGTCACCCGGTTCGAGCTACTCCACACCCATTTATCAC TCTATCGACCGCTTTACCCGAGGGCTTTTATCTGGTGATAACTTCTTGGG TCTTGTTCTGCTGCCCGCATGAAAAGTTAATTAAAGCGAAGAACACGTTA ACCCTGAGAGCACAGCAATCGTCATTTTTCCATACGTCGTTTCGGGATTA TTGACAGATATCTGTTCCACCACATGCGGTGCGGCATTCTGGTGGTGATA CGCAACAAGCGGCTCGTCGTCTTCGCGCCATTTGCTAACAAGGACTACAC CAACGATTGGGACGGCGCGTGAGTGGGCATGCTGCGTTTGTGGTGTTTGC TGTTGCTGCTGCTAGGCTAGCGTTATTGACGCTGGTGACGATGGTGTCGT TGCTCGATAGATGAGAATTATACACCAAATGGTGTCGGGCCACCATGCGG CTACCTTAAGCACTTCCAAGGGCGGCTCATGACACCTTGATCTCGCCGTC TCTTCCCTCGAGCATGTTACCTTCCAACAACAAAGGGTCTGGGCTCTTCG GTACGTCATGGACACGGAAAAATGGTCACACTCACTCTCGTACCCCTGCC TTTGTCGTGCTTCTTCTCGCCTCCACCGCGACACTGCTGTGCGGTCATGT CAGGCTGGGGGTCAAGGAGGAGACCCTTCAGGACTACTACCGAAAAAAGG AGGAGAGCTACAGGAAGGTGATGGCATGCATGGTCAAGTAGGCTGCGCAA AATGGCAAAGCAACAAGCAAGTACCCCGCGTATTACAGCACAAGGCAACG ATACATACCAGCTGTTGTGGTTTAATGTCCATCCACGTCGGTTGATTCTC GGAACGGGACTAATGGAATATGTCTTCAGCAAGCACCAGGGACAGCAGTG ACGCCAAATACAATATCCTTTCCTTTCGATGTGATCCAGCGGTCCAACTG GCATGAAGATTTGGAGGAATTTAACCTGTTGCTGAAACAACAGGAAAATG TGTCTCTCAGCCTTTTTCACCAGAGTCTTGTAACCCCCGTCGCCGCAACC TGAGCTTCCAACACGGCCCCCCGCGAGCGAAGTCTGGTTTGATCCAGTCC TTCTTCCACCACGGCACGTAGAGTCCCGTTCCTGCTCTCCTCTCAGTTGC TTCAATTGATTGTAGTATTAATACTTCTCAGTGGCTTGGTTGTATTTCAT TTCTTTGTCGTATCCACGGGCCCCGGAAGTCGCGTGCTACGGTAACAGAT TGCTTCGAAATGATGAGACATCGGGTATAGTTCAGCACGACTTTCGAATG CGAAAATAACTACAAAGCTATGCCATTGCTACTACAGCTGCGGCAACAAC CCTTCCGCTGCTTTTATTTGTTTTACGCTTGTAGGAGAACGTGATTGAAG GGGTAGAAAACTGGTGGGCGAACGGGAACATCATCTGCAACGAACACCAG CGCCCGCGAGAAACAAACAGTCAGGTACCGTACCGCATCGCACCGTATCA TACAATTCCGTTTCGTACCGTGGTTTGCTGCATCGCGCGGTCTACCGTAC CGTATTATCCTATACGCGAGAGACACACAGTCAGGTGTACGGCACGGCAT CGGAAATGCCGTATCGTGTCGTACCGCGGCATGCTGTATCGCACGGAATA CCGTATCGTGTACGCTATCCGAGAAATCGCGACCAGATGCGGTGGTCTAC CTGTTGGGCGCGGCGAATGCCGGCTTGATATCTTGGGGGCAAGTCCTGAG CCTTCGATCCGTTGGAGATTATTTACGTTTGCTAAAAGTGCAATTAACGC TATGCAGAGGTGCTATCGTACAACACGCAATTTCGTAACAGAAGCAACGC AATACGAGACTGCCAAGCGAACAACTTTTGCTCGACATTACTCGTAAAGC GAGTGCTACAGCTTCTCTCCGTCTTACCCATTCACCCTCATTCCATTTCT CACGCACTTAAGCAACCGAAATCAAGCCATTGGACCAGTCATCGCTGATT GGTCTGTTGGTTTTGGCTTCGGTTGCTTGAAGCAACAGCGGTCGCTCCAA CTACCCTTCCCCCCTTCCACTTCCGGCTGAAACCCACGAACACGGAAATT GTCCCGTCCCATCAAACATGAAGACCGCCAACTGCTCTCCCGCTGCGTTT CCTACTGACCGCTAGTCTGTCCTTCTTCTTGCCGCGTGGCTTGCAACGTT GCTTGCTGTAACATAGCGAACATACTTCTATTATCAACGGAACAGGAACA ACAAAACAACGAAGCAACACGCGGGTCATGGGCCGTCATACCCGCCCCAG CCCCGTTCCCACCTCCTAACTAGTCGATGCGCACGCACAATCGCCCCTTT GCCTCTGCCTGTCTTCATCGCTGTCCTCTCGTCCTGTCTGTCTACCTCTC CGTCTCTCTGTCTACGTCTCCTGTCTGTCTGTCTGTCTGTCTATCTCTGT GTCGTTTTCTACCTCCCTCTCTCTCTGTCTGTCCTGTCTGCCTGTCTGTC TGTTTCTCTCCCGGTTGTCTCGGATCATCAGTACTGGGGGGACCACTTCA ACGCCCCTCTGAGAGACATGATCGAGCAGGCGTGTTCGTCGAGGGATGTC GCCGACTGCGAGTTCTTCATCAACAAGCGGGACTACCCACAGCTGAAGTT CAACCCGAACTCGCTCAAACCGGTGGAGCCCTACGGTTTCATCTACGATA AGGACGACCGGTAAGAGCAACGGCTGTGCAGCAAATGTGTGTTTCAACGC AAGCGTCATTGCCAGAATTGGAATAGGTATTACAAGGTTAAGGGCCACAG CAATTGTGCGTTTCGACACAAAAGCCGTTGCAGGATTGGAGGAGGTAGTA TGGTTGGGCTACACAAATTGTGCGATAGGACATAAGAGCCATGGCCAGAG TTGGAGGAGGTATTGGTTGGCTTTGGAGCTGCTTGCATAGCGATTGCAGC GACGTTTGAAGCGGGAACGCCGGCCGTTGTTTTGTGATTTGGAAACCAAA GTGCTGGCGAGGCATGAACAAGGATTGGATGTTGGCTGTTGTGTGGCTCT AGAGGCTGCAGACGGTGGCGGAGCATTGAGGAAGGCGATCGGAATGCTGG GCTTGACGTTGGCACTGAAGGTTGATGATGATGTTTTGATAGGAATGCTG GGGTTGACGTCGGAACAGACATTGTGGTGTTGTGTGCTGTGGTACCTTTG GGGTATTGCTTGGAGGAACTTCTATGCCGTTTTCGTTGATCAAGGCCGGG AATCACCAACCACAGCAAGGGGTAGTTACCGTTACTGATTATTTGTTACG ACTGTGTATAGTACGCTGTCTCTGTCGTGACTAGTGTTTTGCCTACCCCG CTCGCCCCCACGTTTTTCCCCGGAACCGCACAACCTCGTTTCACGAAGTT AAGTTTGACTTAGAGACGAAGTCCGCGTACACTCTCAACTTCGATAACCC CAAACTTACAACTGCAAATTTACTTGTCCTAGCATGTCTGTCTCCAACTT GACCCGTCCAGTGATCCGGAGCAAGACGTGCCCTTGAAGAGGCATCGGTA TCCGTCCTTCACGCCCATCGTCAGCTTCTACTGCTCAGAGAGGTACGAGG GAAGACTGCCGCCAATTTCAAGACCTACCGTAGCTGCACTCTTCACCCGC ATACTACTTGCCGTAAGGTTGCGCGTCAGCGCACGGGGGTATGAACGATG TTCAAAGCGTCATTTCTCCACAACCAGGAGATGACCACTGTCGAAAAGGG CGGCTTTGGAAATATCTCATCAAGAGCTTTTCTGAGAAGCATCAGTTGGC GCTCGCACCCTCCTGGTTGTGGAGAAATTACGCTTTGAACATCGTTCATA CCCCCGTGCGCTGACTCGCAACCTTACGGTATACTTCAGAAGTACGTTTG TGGTTGAGTGGGAACGGCGTTGCTAGCATGCGTACAGCAGTCCCACTATT TCCATCCGCCTATGGATGGGTCCGCGACTGCTCCCTCATGTGACACTAGG GTACAGCACCGCCAGATAATGGGTCAAATGGCTTCAAAATTGCAGTTTGA TTGCTGATCCGGGTGCGTACGTAAGTAGAAACTTTTGACGAGACGCATGC TGTATTAGTTGTCCTACTCTGACGTAGACCCTGAATCTTCTCTCTCCCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC GCTTTCTTGGTTTGCACCGCCAGTTGACCTTTTCGACGGTATTGGTTTCC CCCTCTCTGGGATTCGGGTACTATGAACTGACCCATTCGTCGAACACTCC CACCCTCACCCACCCACCCCTCCTGCCTCTCTCCGGCCCGTCGTCTCAAA ACTAGGCAACTGGGTGCGTGATCAATTAAAACAATCAGTGGGTCGATTAA CCGCCAACACCCCTCTCCCCTATCTCCCCCCCCCCCCCCCCCCCCCCCTC TCGTTCTTCCTTTCCTCCTGACCCCTCTCCACGCTCGTTGTGGGCACGCC ACAGGTTTGCTGACATCCCGTTCCCTACGTCGGAAGACTGGGAAGCGGCC ACGGGAATGGTTTTCCCCAAGACGTTCAGCCACCAGGTGTCCTAAACAAG TTACAAAACAAGATGCTGTTGCGCGCGTGCATGCCTTGTGAAACGGATGT TTTTGCGCTCAGTTGAATGCCTGTGCTGCTCCTGTTGTGTTTTTCATGAC GACCTTTGCTGAGATCTTCATCCAGCCCCTGCCACCCCCCTTTCAAATAA AACGTGCTTGGGCGGGTATTTTGTTGCGACCCCTTGTAATATGCTCCTAT AGGTGAACAAGGAGGGCGAGGTGGAGATCGACGAGCCGCGAGATCTCTTC ACCCAAGAAAACTTCAACAAGTTTGAGTGCGACTGGGCCGACAAGCAAGA GACGGCTTTCTTCAGGTGCGAGGATACCCTCTCCCCTACGGTTGCGTTCG TGTTTTCGCTGAACAATATCCGTCCAATCAGCCTCATGGCATGTCCCGTT TGGCGCTGCAAACGCAAGGATGATGTCTCGCTTCTGTTTCATCCTTCATG AAACGTAGCCTTACTGAGGGTAAGGGCCGGCGTAAACTTGGCATATCGCT CCGTCCCGGCCTTGTAGGGATGCGAGGTCAATGGTCTAACGACTTCCTCA TGCGTCTATATGCTTACACCCCGCCTTCCCCCCCCCCCCTTGCTTTGATT TCGTCCCCACCGGTGGGAGGCAGCTCAATTTGCCAAGCTTGTGCAGGGTA CCAGACCCTGGGGCATGTAGACCGTTCACCTCTACCTGATAACTGTAGTT GAACACGTTGAGCGGCAACGTTAATGTTGATACCCCTTATCGAAAATGCC GGACGTTGGGTACATGTATCCATCTCATTATATACGGGGTTCGGGTATAC CGTCGACGAGATACCCGTGTATCCGGTTCTTGGTAGGTACAGCAGCATCG GTGCCAGGACCCACAAGTTTAGTTCGCGCTGGGTAATATCAATACCTCGG TACCCTTGGCCGAAGAACCGGCAACTCGTCCACCACAACCCTGCAAATTC GATACCCCCCTCTGAACTGCGAGCTGAACTGTATGATCTCAAGGATTTTT GTACTGTCTCAAGACTGCGGCGTGCATGACCACGAGTATTCCCGTACCCC CCCATTCCGTAAGTGAATCCTCAATTTTATGCCGGGACTCCCTCTTACCT TGGCTTGGCTTGCCAGGGGCACGGCAACGGGAGGAGGCACTACCCGCGAG ACCAACCAGCGACTAGCAATTGCCTGGCAGTCCTACGAGTGGGAATCAAG CCCGGAGCACAACGGCAAGGGGTCATCACCATCCGATGGCGGCGGTAGTG CATCGACCGACCCCTTGCTAGACGCCGCGATAGTCGGTGAGTCAGTCAGG CTCCTTGTTGGCGGTGTTGTTGGCTCTGCCGTTGGGGAGAGAGCTCATCG ACTTAATAGGTAGGTGGCCTGCTCGTAGTGGTCGTGGCCGCCGTAGCTCC AGCGACGTTTTGCCGCGGTGCGGTGGTGTGCCGCAAAGGGCGCACGATGG CAAACCAACGGCCCCTCTGGGTTGGTAAACCCTGCGGCTACAAAACAGCT GCCTGTGTTGTTCGTCTCGCGCTTTTGCGTTGCCCTTTTTTTCTTCATGG GTGTTCTCTTTCTCGCGCGAGACCGGCTGGACTCGCCCTATCATTTGTTT GGATTAAGACATATATTCGCGTGTTTGCCGACAGGTGTTGCGCTGCTGTA GCTTCTGCAACCTACAGTAGTAGGACAGAGCGCAAAGCCAAGGCGGCTCG CCTGTTTCTCCCGCCTTCTCGGCTGACCTTTCTATCGCTTGGCGCAGTCA TCGGGCATGAGTTTTTTAGCGTTCACGCCCTCAACCTTTTCGCTCCGCGT GTCTCCCTCCTGTTTGTCCTTATGGCTGTGTTTCTGTTGGCAACCACCCA ACACAATGGTGACAACGATTGCTCTTGTGCACGGGATGTTCCTTGCCGCA CTGCTGTCGTACTGCCGTCACCGTTGTTGTTGTTGCACTCGGTCAGGTTG GAATCTGAGAGACAAGAAGATAGCCGGGCAGGAGATGCGGTTTCTCGATC CGACCACGATCCCTTTCAAGGGAGGAAGGGAGAACTTCACGCCCATCTAC CAACAATCCAAGTTCAAGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1731:6213..15333+

>mRNA_Ecto-sp13_S_contig1731.5164.1 ID=mRNA_Ecto-sp13_S_contig1731.5164.1|Name=mRNA_Ecto-sp13_S_contig1731.5164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1491bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1731:6213..15333+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGCAACATCAGGGCCAAGTCTCCGGGGTTTGTTCGATAAGGACGA
TGACAGCGTACATCCTCTCGTCAACAACAGCATCTTCAAGGCCTGCCCAG
CTGGCATGCGGTTCGAGACCAAAGAGGACTGTAAGCGGTTCGTCCGGGAG
CATTGCCAGGAGGGAAGCAACCCCGATTACCCCTGGATGCAGCAGATCTT
CACCACCCTGGTCACCTGGCGGCAGCTGGAGCAGTACCTCTTCCCCTGCT
TGCGCGATATCTGGAAGAAGACCCCCTTCCGGAAGGCCGCGCCGCTTGAC
CCCGACCGAAACGTTTTCCTCGGCGAGGCCGAGCCATCGGGAGAGTGGCC
GCTGCACGCCGAGGTGTTGGCGGGCGTCAGGAAGCGGCTCGATCTGCCGT
TTCACGGGGGGGGGGTTGACGCTTCGGGAAGGCGGCTGGGGTTTCTATCG
TGTGCGTCGACGGAGAACACCCTGAGATATCTGTTCCACCACATGCGGTG
CGGCATTCTGGTGGTGATACGCAACAAGCGGCTCGTCGTCTTCGCGCCAT
TTGCTAACAAGGACTACACCAACGATTGGGACGGCGCGCTGGGGGTCAAG
GAGGAGACCCTTCAGGACTACTACCGAAAAAAGGAGGAGAGCTACAGGAA
GGAGAACGTGATTGAAGGGGTAGAAAACTGGTGGGCGAACGGGAACATCA
TCTGCAACGAACACCAGCGCCCGCGAGAAACAAACAGTCAGTACTGGGGG
GACCACTTCAACGCCCCTCTGAGAGACATGATCGAGCAGGCGTGTTCGTC
GAGGGATGTCGCCGACTGCGAGTTCTTCATCAACAAGCGGGACTACCCAC
AGCTGAAGTTCAACCCGAACTCGCTCAAACCGGTGGAGCCCTACGGTTTC
ATCTACGATAAGGACGACCGTGATCCGGAGCAAGACGTGCCCTTGAAGAG
GCATCGGTATCCGTCCTTCACGCCCATCGTCAGCTTCTACTGCTCAGAGA
GGTTTGCTGACATCCCGTTCCCTACGTCGGAAGACTGGGAAGCGGCCACG
GGAATGGTTTTCCCCAAGACGTTCAGCCACCAGGTGAACAAGGAGGGCGA
GGTGGAGATCGACGAGCCGCGAGATCTCTTCACCCAAGAAAACTTCAACA
AGTTTGAGTGCGACTGGGCCGACAAGCAAGAGACGGCTTTCTTCAGGGGC
ACGGCAACGGGAGGAGGCACTACCCGCGAGACCAACCAGCGACTAGCAAT
TGCCTGGCAGTCCTACGAGTGGGAATCAAGCCCGGAGCACAACGGCAAGG
GGTCATCACCATCCGATGGCGGCGGTAGTGCATCGACCGACCCCTTGCTA
GACGCCGCGATAGTCGGTTGGAATCTGAGAGACAAGAAGATAGCCGGGCA
GGAGATGCGGTTTCTCGATCCGACCACGATCCCTTTCAAGGGAGGAAGGG
AGAACTTCACGCCCATCTACCAACAATCCAAGTTCAAGTGA
back to top