mRNA_Ecto-sp13_S_contig173.5160.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: D7G8H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H5_ECTSI) HSP 1 Score: 1142 bits (2953), Expect = 0.000e+0 Identity = 568/583 (97.43%), Postives = 576/583 (98.80%), Query Frame = 1
Query: 1 MKTVNNAVGRPLPEAKASKLPRHSKEKPEIRHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGSGAATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
MKTVNNAVGRPLPEAKASKLPRHSKE P++RHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIK+RTYSQ MKELAGENGIIIVGFWNGNKFG+ALQYFY+KHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGAS PSPRGG G ATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPAT+FSTGLPAASFGFCFSQDALCHAGRQT KALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTS+AVHFKTLLEV AETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLR+
Sbjct: 1 MKTVNNAVGRPLPEAKASKLPRHSKENPDVRHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKSRTYSQ-MKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASTPSPRGGGGVATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATFFSTGLPAASFGFCFSQDALCHAGRQTPKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEV-AETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRW 581
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A836CC57_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC57_9STRA) HSP 1 Score: 517 bits (1331), Expect = 5.690e-175 Identity = 283/573 (49.39%), Postives = 376/573 (65.62%), Query Frame = 1
Query: 97 TFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAH-PSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGAS--IPSP------RGGSGA-------ATAATFLPHPDTLSEDTLIAEEEAHSLNH-----YGDSFTQYFYRELWGG-LHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
TF + GDWS M A+RWHD+MY+EG+YF +L+ DT VYT+ + YCG A+ +VEVG GTGDVIL +A DF++S+G+DIN FL Y++ + K+L ++ F +GSAT+L DI+ P++ + S VVTCVNNTIGIFPDAIK TY QQM+ELAG +GI+IVGFWNGNKFGDALQ+FY ++P+LCG++ GA ID E L TA GY THW+TPEEAR VL GF+V+D+TE+GVGVLCTC G AS +P P R G G+ A AAT + +++ D+ + + ++ Y D++ Q FYRE+WGG +QH+GLY+ A LPA R VEACE +T+ L A+P G + E GSG+G +RYLA NF ATV CVD++R +N++NR+ T +AGL V VG ++F TG P ASF SQD LCHA +ALEE AR+L PGGV A TNI+ +A EEL VLARL+++ +++ S + A AGLE +E D T S+ HF T+LEV+ E A ++ TS YV + L W A G LR+
Sbjct: 8 TFSKLGDWSTMTASRWHDAMYFEGAYFMKLWADTLVYTKEKAAKYCGGAAKCTNVEVGSGTGDVILGMAGDFRYSVGLDINSEFLRYSRARVAKDLDKRVKFIEGSATELTDIIMREVPTVRSGSV--VVTCVNNTIGIFPDAIKPATY-QQMQELAGPDGIVIVGFWNGNKFGDALQHFYARNPQLCGTMDGADIDWEGHTLTTAGGYRTHWSTPEEARTVLLRYGFDVVDVTEVGVGVLCTCKGRASGKVPPPQLAQPQRRGRGSSRDWTAVAAAATASSNNGSVNGDSRASSPDRRAIETAVAALYEDTYQQQFYREVWGGGRNQHIGLYDAAALGGLPAAARAVEACELATLRLVEKARPAHGARIAEFGSGFGGTARYLAANFDATVVCVDISRHANEVNRQQTREAGLQSKVLVGAERSFFETGEPDASFAMVVSQDTLCHAEDYAGRALEEGARILQPGGVMAFTNIVVDPQARPEELTRVLARLKMSCMDSPDSLIAAAEVAGLELVEFEDTTPSLVQHFSTILEVLDERCDA-LVATTSEAYVADTVGGLEAWRDAGINGALRW 576
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A6H5KUA7_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA7_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 4.150e-134 Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 1
Query: 1126 MGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
MGTKAVELGSGYGSGSRYLAVNFGATVDC+DLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEV AETRKADMLKHTSPEYVDEL+KDLRNWLSASNRGVLR+
Sbjct: 1 MGTKAVELGSGYGSGSRYLAVNFGATVDCIDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEV-AETRKADMLKHTSPEYVDELAKDLRNWLSASNRGVLRW 207
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A7S3ZFK8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFK8_9EUKA) HSP 1 Score: 184 bits (468), Expect = 3.380e-49 Identity = 126/404 (31.19%), Postives = 199/404 (49.26%), Query Frame = 1
Query: 118 WSLMDAARWHDSMYYEGSYFWQ-LFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASD----FKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGSGAATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKR----VVEACENSTVVLFSIAKPTMG----TKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRV 1290
W M ++ W +MY S+F + +T R A G P VEVG GTG + + + FK +G+D N F+ A++ P F G +L ++++ + S D + VV VNNT GI P+ ++ ++ M + ++G+II+G WNGN FGDA+Q+FY ++ LCGSL+GA D ++ + TA Y T WT PEE ++++ES +NVLD+ G +L P+ +T +D E A + +Y FY+ WGG + H+GLY++ + P + V +A + S L MG +A+++GS YG +R +A F V CVD+++ ND+NR T +AGL LV++
Sbjct: 11 WREMSSSHWDQAMYENASFFNRHQVSNTDFIARHAVVNSRGKPI--VGVEVGTGTGKFLKIVLEEHPSLFKRLIGVDFNPNFIETARKAVPDA-----DFTLGDCRELKNVLNDNYSEDMQDSFKVVFSVNNTHGILPEKVRD-DINKAMADTTSDSGMIIIGLWNGNSFGDAVQHFYAQNDHLCGSLQGASFDWDECKMVTASNYTTKWTKPEELGKMIDES-WNVLDVVSSGPMLLIAAK-------PK---------------NTKVQDNASGEAGAETEYYYDTEDASRFYQNFWGGENVHIGLYDN---LEEPNESKDLETVFKASDKSLTRLLDHVYDHMGGLKIRRAMDMGSCYGGCAREMAQRFACEVLCVDMSKVENDINRERTLEAGLEKLVKI 380
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: F2UCP4_SALR5 (Methyltranfer_dom domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UCP4_SALR5) HSP 1 Score: 184 bits (468), Expect = 1.230e-48 Identity = 96/242 (39.67%), Postives = 143/242 (59.09%), Query Frame = 1
Query: 97 TFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPT--VVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVL 816
T + GDWSL +W ++++ S+F QL+ DT + + G +EVGCGTG+ I+ LAS K+ +GIDIN+ F+ Y+Q Q D + F G AT L +++S D P +V CV NTIGI P+ ++ Y + M E+AG++G +V +WNGN FG+A+Q+FY+++P+LCG KG +D + L T GY+T WT PEEAR +L+ G L++ E G GV+
Sbjct: 195 TDEEGGDWSLFSVEKWRNAVFTTKSFFEQLYADTHTFIEQQVEKLGGRDNVCL-IEVGCGTGETIIPLASAAKYCIGIDINEDFIKYSQVQNKA---DNVRFVCGDATKLQELLSTSEVADWAGEPLRKLVICVGNTIGIIPEFLRDSIY-RNMAEVAGDDGACVVIYWNGNCFGEAVQHFYNENPQLCGPFKGKHVDFQACTLQTPSGYNTKWTKPEEARELLQSKGLTTLEVVEQGRGVM 431
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA) HSP 1 Score: 164 bits (416), Expect = 9.190e-43 Identity = 90/256 (35.16%), Postives = 154/256 (60.16%), Query Frame = 1
Query: 982 FYRELWGGLHQHLGLYEDP-ATIALPANKRVVEACENSTVVLFSIAKPT-MGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVL 1743
FY+++WGG H+GLY+DP T ++ +R+ A E S LF+ A+P +K +++GS YG +R A +G TV C+D++ + N++NR T GL+D V + ++F TG PA ++ SQD+L HAG + +A+EEAAR+L PGG T+I+++ +A EL+ V R+ + + + S+ A GL+ + D+T+++A H+ + V+ E ++A+ L + SP YVD + + L W++A+ + L
Sbjct: 29 FYKQVWGGSFIHVGLYDDPQVTDSMDPMERIKLASELSAKRLFATAEPLDSSSKVMDMGSAYGGNARLCAKTYGCTVTCIDISCKENEVNRSTTAAEGLADKVLIPGERSFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAELDAVYRRIHLEDMGSPASYQAWAERCGLKLVGFEDRTSNLAAHYGAVKGVL-EAKRAE-LTNISPAYVDNMIRGLDAWVNAAGKSNL 282
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A9UZS4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZS4_MONBE) HSP 1 Score: 159 bits (402), Expect = 2.390e-37 Identity = 80/226 (35.40%), Postives = 130/226 (57.52%), Query Frame = 1
Query: 112 GDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSI---YCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLID-IVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGF 777
GDWS +W +++ S+F L+ DT + + + + +S +EVGCGTG+ ++ ++ +G+D+N F+ + ++QT ++ K+ F G A L ++ A+ +VTCV NTIGI PD K Y +K LAG +G+++V +WNGN FG+A+Q+FYHK+P+LCG+ G+ ID+ + L T GY T WTTP EA +++ + F
Sbjct: 1098 GDWSEFSVNKWRSAVFTTKSFFNDLYEDTTAFINKYLAHLDDWFSGADQSCLIEVGCGTGESLIPHYDVARYCIGVDVNQVFVDFCKKQTTEKYAKKVGFACGDAEFLESMLLDANFGSFLNDTKKLVTCVGNTIGIIPDPKKTAIYRAMLK-LAGPDGVVVVVYWNGNCFGEAVQHFYHKNPQLCGTFDGSAIDLVNCSLTTPSGYSTKWTTPAEAETIIKVAIF 1322
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A2E5MYM9_9PROT (SAM-dependent methyltransferase n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E5MYM9_9PROT) HSP 1 Score: 142 bits (358), Expect = 8.980e-35 Identity = 87/267 (32.58%), Postives = 147/267 (55.06%), Query Frame = 1
Query: 955 HYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRV--GEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
+Y + FY+ +WGG H+GLY + A A++R VE V T+ +++GSGYG +RYLA FG V C++L+ + N+LNRRLT+ AGLSD +RV G+ P ++ ++QDA+ H+G + + L+E R+L PGG F T+ ++ ++ N L+ +L R+Q++SL + + S G + E L T + H+ + EV+ + R +++K + +YVD + K L+ W+ ++RG L +
Sbjct: 11 YYNSNEADNFYQIVWGGEDIHIGLYFNEADTIADASRRTVEQMATRLVDCKE------ATRVLDIGSGYGGSARYLAGRFGCQVTCLNLSEKQNNLNRRLTKNAGLSDKIRVVYGDFENILE---PDETYQIVWAQDAILHSGNR-KRVLDEVCRVLIPGGQFIFTDPMQTDDCPNGVLQPILDRIQLSSLASPIFYKTELNSRGFKEAEILLLTDHLRKHYWHVREVL-KFRYHEVVKFSGQKYVDNMIKGLQYWIDGADRGYLAW 266
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: UPI0008F9D4B4 (methyltransferase domain-containing protein n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9D4B4) HSP 1 Score: 140 bits (353), Expect = 4.950e-34 Identity = 79/281 (28.11%), Postives = 152/281 (54.09%), Query Frame = 1
Query: 907 LSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
+++ T +E + + +Y S + FY +WGG H+G+Y+ A++R VE K TK +++G+GYG +RYL +G VDC++L+ N+ NR+L ++ G++D + V + + + + AS+ + QD++ H+ +T K LEEA R+L PGG F T+ +++++ EE++ VL R+ + S+ + + A G + ++ +D + + H+ ++L+ V E A + K EYV+ + K L +W++ +G L++
Sbjct: 1 MADPTTYSEAVSTAREYYNSSSAENFYSTIWGGEDIHVGIYQSENDTIFTASQRTVEKIAEQL-------KLAPSTKVLDIGAGYGGSARYLVKTYGCPVDCLNLSEVQNERNRKLNQEQGVADKIDVYD-GDFEALPMSDASYDVVWCQDSILHSSNRT-KVLEEAYRVLKPGGEFIFTDPMQSDDCNPEEIQPVLDRIHLPSMGSVGFYREVAARLGFDEVQFIDMSEQIPNHYGSVLKAVNENYDATV-KQCGEEYVENMRKGLNHWVNFGKQGKLKW 271
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A4Q7UW46_9PSEU (Sarcosine/dimethylglycine N-methyltransferase n=1 Tax=Pseudonocardia sediminis TaxID=1397368 RepID=A0A4Q7UW46_9PSEU) HSP 1 Score: 137 bits (346), Expect = 4.220e-33 Identity = 86/273 (31.50%), Postives = 137/273 (50.18%), Query Frame = 1
Query: 931 EEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
+ EA + ++Y FY +WGG H+GLY PA++R VE + IA GT+ ++LG+GYG R LA GA V C++L+ ND N RLT + GLSDLV V +Y LP AS +SQDA H+G + K L+EA R+L PGG T+ + + EL +L R+Q++++ T + G+ + D + H++ + E + R++++ S +Y+ + L++W+ N G L +
Sbjct: 5 QAEATARSYYDSEDADTFYSSVWGGEDIHVGLYATDDEEIAPASRRTVER-------MGEIAGIGKGTEVLDLGAGYGGAGRQLAKRLGAKVTCLNLSPVENDRNTRLTSEQGLSDLVSVST-GSYEDVPLPDASVDVVWSQDAFLHSGDR-DKVLDEAVRVLRPGGHVVFTDPMAVDGVDQSELTPILDRIQLSTMATPGFYTAGLEKRGMTGVTFHDHAAQLPTHYRRVREELV-ARESELRAAISEQYITNMKAGLQHWVDGGNAGNLTW 267 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig173.5160.1 >prot_Ecto-sp13_S_contig173.5160.1 ID=prot_Ecto-sp13_S_contig173.5160.1|Name=mRNA_Ecto-sp13_S_contig173.5160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp MKTVNNAVGRPLPEAKASKLPRHSKEKPEIRHTFDRKGDWSLMDAARWHDback to top mRNA from alignment at Ecto-sp13_S_contig173:24539..34503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig173.5160.1 ID=mRNA_Ecto-sp13_S_contig173.5160.1|Name=mRNA_Ecto-sp13_S_contig173.5160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9965bp|location=Sequence derived from alignment at Ecto-sp13_S_contig173:24539..34503+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig173:24539..34503+ >mRNA_Ecto-sp13_S_contig173.5160.1 ID=mRNA_Ecto-sp13_S_contig173.5160.1|Name=mRNA_Ecto-sp13_S_contig173.5160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig173:24539..34503+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |