|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig1728.5147.1 vs. uniprot
Match: D7G7W0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W0_ECTSI) HSP 1 Score: 2103 bits (5448), Expect = 0.000e+0 Identity = 1174/1359 (86.39%), Postives = 1202/1359 (88.45%), Query Frame = 2
Query: 164 MMDVEEIDDNSSQGANLPPATLALATNKRTKTKKDPPAVAPSSTLTRFLGPAGPPSRSAWDDVNRQCPVCQQTGFSSRSLALHVNDCLER-TQADASDSESAAGGRKDAAGGVGNPDGK----------EAGSAITDVTGSGGSEGNTRRMSRERTPKGKVVHRRGGGQQVRQDKAAKKMKTLQGERAIDTERAASATSKARVSHTRNQAADKTKSNTRAALQHCLPDPTQSSSPDGSQQPTPLRRRALGLARPKGHQIVSDAMPTPATASDASRARKGCGSRALDEIAQAQLLYLREASARGPAHGGGWLGTQLFPTPDEEXXXXXXXXXXXXXXXTGGGEGACRSSCGVGECGTGRNKRMRKENRRVRGRPASWGARPNDEQRGWFGTWPAGGSVDDGGVDCWGDGDGYLTLKAFPPPETLVESDGEDDSDGGGAVMPADAAQSKRLGEEGSPAPSSRADRFLQVFSRLQPARRALRLHEPPSPPPTPQDLGDNLTNAKVKNVSTRSSQTAVAPTNKNTIASSSGPQQAERPGGSPTMRPSVELEPGGAGNSARTGTARSCEGERVRELTTPPPKCTALETISEVSANNNRRPSATTASSPVQSTSAAIIASLKPVSGHKISRKQPPDERPRQQRQPAHRSGEEGSRRHEQEGNSRISLEGASSKSSLPTPTVRRTSTFQVQACSGGVENVAVSAQSVNPPRVVKTPAKRYGPANESAADASSEXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSSVGSECATSALQTRRPVAVANENLTIGEHRKRTAHVDRTPVDATTHGVPQPPPRHGSSTSSDGVKRSMPGATVAKKRTSSSHERNVRGSSMDAGGHRRSQRDPPPGLQRAIHTSSQWNGSRSRGALASRASSGLLRSADLPARSEYQRKKNGNAKVAPAANDGVVDLAGSNSSQLEECEGRKADVPQKGSLTVVWEHGATLRDSWSIDSSHELGRLAFGASLDYAAVWYLSPADADCVGVFRYRVVPHPRLAPAGGWISGSGRLRDDPYTIVKAEAASSIRPSKAASRDRGDEQEGSGQRQPNLDPHHHQGRVGVEGPTKSTHQAADGGYTAAAPSRGHAERSRGTNGTHXRHAKRYEPAEESQSDRVSAGPTAEGGRRTQPQFRSKVLPKAVSAGGSFGLATSPSAKALEANDSGDKVTCPVCNRGMDHWKSGQRQQHVHACLIKQPSSAKKNRLAGDARPCASRPSGVAHRSSLQFDGSSDPGESTTPRPERGPGVRKTDGTGSSANRQEGPPDPSESPRSTRVSLQGVFSPKPARGPDGTNAVSASRGTAPARATTGRVSSS--KGLTECPVCGVSFGGRQGQWERQAHVQQCLDSAWEP 4201
MMD EEIDDNSSQ ANLPPATL LAT KRTKTKKD PAVAPSSTLTRFLGPAGPPSRSAWDDVNRQCPVCQQTGFSSRSLALHVNDCLER +ADASDSESAAGGRKDAAGGVGNPDG+ EA SA+TDVTGSG EGNTRRMSRE TPK K VH RGG +QVRQDKAAKK KTLQGERAIDTERAASATSKARVSHTRNQAADKTKSNTRAALQH LP+ TQSSSPDGSQQP PLRRRALGLARPKGHQIVSDAMPTPA AS+ASRARKGC SRALDEIAQAQLLYLREASARGPAHGGGWLGT+LFP PDEE TGGGEGA RSSCGVGECGTGRN RMRKENRRVRGRPASWGARPNDEQ GWFGTWPAGGSVDDGGVDCWGDGDGYLTLKAFPPPETLVESDGED+ DGGGAVMP DAA+S RLGEEGSPAPSSR DRFLQVFSRLQPARRALRLHEPP+P PQD GDN NAKVKNV TRS TAVAPTNKNT+ASSSGPQQAERPGGSPTMRPSVE EPGGAGNSARTGTARSCEGERVRELT PPPK TALETISEVSANNNRRP AT ASSPVQSTS AIIAS K VSGHKISRKQPP E P QQR+PA+RSGEEGSRRHEQE +R S EG+S K SLP PTVRRTSTF+VQACSGGVEN +VSA N PRVVKTPAK YGP NESAADA+S+ XXXXXXXXXXXXXXXXXXXXXXXXXX QTRRPVAVANENLTIGEHRKRTAHVDR PVDATTHGVPQPPPRHGSST SD VKRSMPGATVAKKR SSSHERNVR SSMDAGGHRRSQRDPPPGLQRAI TSSQWNGSRSRGALASRASSGLLRSADL ARSE QRK+N NAKVAPAANDGVVDLAGSNSSQLEECEGRKADV QKGSLTVVWEHGATLRDSWSIDSSHELGRLAFGA LDY AVWYLSPAD DCVGV RY VVPHPRLAP GGWISGSGRLRDDPY IVKAEAA SIRPSKAASRDRGD + GSGQRQPNLDPHHHQGRVGVEG TKSTH AADGGYTAAAPSRGHA RSRGTN X A+RYEPAEES SDRVSAGPTAEGGRRTQPQ S+VLPKAVSAGGSFGLATSPSAKALEANDSGDKVTCPVCNRGMDHWKSGQRQQHVHACL+KQPSSAKK RLAGDA P ASRPSG+ HRSSLQFDGSSDPGESTTPRPER PGVR+T+GTGSSANRQEGP PSE PRS+RVSLQGVFSPKPAR PDGTN VSASRGTAP KGLTECPVCGVSFGGRQGQWERQAHVQQCLDSAWEP
Sbjct: 1 MMDAEEIDDNSSQEANLPPATLTLATKKRTKTKKDSPAVAPSSTLTRFLGPAGPPSRSAWDDVNRQCPVCQQTGFSSRSLALHVNDCLERRARADASDSESAAGGRKDAAGGVGNPDGRNTATATTVGNEASSAVTDVTGSGSREGNTRRMSREGTPKSKAVHGRGGEKQVRQDKAAKKTKTLQGERAIDTERAASATSKARVSHTRNQAADKTKSNTRAALQHRLPNSTQSSSPDGSQQPNPLRRRALGLARPKGHQIVSDAMPTPAAASNASRARKGCDSRALDEIAQAQLLYLREASARGPAHGGGWLGTKLFPAPDEEGESADDGSMDCWCVGTGGGEGAYRSSCGVGECGTGRNTRMRKENRRVRGRPASWGARPNDEQWGWFGTWPAGGSVDDGGVDCWGDGDGYLTLKAFPPPETLVESDGEDERDGGGAVMPVDAARSMRLGEEGSPAPSSRVDRFLQVFSRLQPARRALRLHEPPTPXXXPQDSGDNRANAKVKNVGTRSPPTAVAPTNKNTVASSSGPQQAERPGGSPTMRPSVEREPGGAGNSARTGTARSCEGERVRELTMPPPKRTALETISEVSANNNRRPGATIASSPVQSTSPAIIASFKSVSGHKISRKQPPQEPP-QQRKPANRSGEEGSRRHEQEDRNRTSSEGSSRKLSLPAPTVRRTSTFEVQACSGGVEN-SVSAPKGNSPRVVKTPAKIYGPPNESAADAASQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTRRPVAVANENLTIGEHRKRTAHVDRAPVDATTHGVPQPPPRHGSSTGSDEVKRSMPGATVAKKRASSSHERNVRVSSMDAGGHRRSQRDPPPGLQRAIPTSSQWNGSRSRGALASRASSGLLRSADLAARSENQRKENENAKVAPAANDGVVDLAGSNSSQLEECEGRKADVRQKGSLTVVWEHGATLRDSWSIDSSHELGRLAFGALLDYDAVWYLSPADTDCVGVLRYSVVPHPRLAPTGGWISGSGRLRDDPYIIVKAEAAPSIRPSKAASRDRGDGRGGSGQRQPNLDPHHHQGRVGVEGLTKSTHGAADGGYTAAAPSRGHAGRSRGTNXXXXXXAERYEPAEESHSDRVSAGPTAEGGRRTQPQTPSRVLPKAVSAGGSFGLATSPSAKALEANDSGDKVTCPVCNRGMDHWKSGQRQQHVHACLMKQPSSAKKTRLAGDATPSASRPSGITHRSSLQFDGSSDPGESTTPRPERRPGVRRTEGTGSSANRQEGPSGPSEGPRSSRVSLQGVFSPKPARDPDGTNTVSASRGTAPXXXXXXXXXXXXXKGLTECPVCGVSFGGRQGQWERQAHVQQCLDSAWEP 1357
BLAST of mRNA_Ecto-sp13_S_contig1728.5147.1 vs. uniprot
Match: A0A7S4J0S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J0S2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 5.800e-5 Identity = 35/107 (32.71%), Postives = 53/107 (49.53%), Query Frame = 2
Query: 2954 PQKGSLTVVWEHGATLRDSWSIDSSH-ELGRLAFGASLDYAAVWYLSPA---------DADCVGVFRYRVVPHPRLAPA---------GGWISGSGRLRDDPYTIVK 3217
P G++ +V E GAT+R+ + ID + LG+L G Y +L P D +C+GV+RY+++ P GWIS GRL+ +PY I+K
Sbjct: 374 PVLGTVRIVSEKGATIREIFDIDEAKLSLGKLKHGDVRQYVEKRFLPPPEDEDEFDNDDDECIGVYRYKIILKPVDKETVDSELDHFNHGWISDRGRLKCEPYKILK 480
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4374 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-06_000120.1 |
| Cds size | 4041 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462902.829771-UTR-Ecto-sp13_S_contig1728:1008..1178 | 1681462902.829771-UTR-Ecto-sp13_S_contig1728:1008..1178 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1728 1009..1178 - |
| 1681462902.921426-UTR-Ecto-sp13_S_contig1728:7703..7774 | 1681462902.921426-UTR-Ecto-sp13_S_contig1728:7703..7774 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1728 7704..7774 - |
| 1681462902.930775-UTR-Ecto-sp13_S_contig1728:8290..8382 | 1681462902.930775-UTR-Ecto-sp13_S_contig1728:8290..8382 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1728 8291..8382 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462902.8387861-CDS-Ecto-sp13_S_contig1728:1178..1379 | 1681462902.8387861-CDS-Ecto-sp13_S_contig1728:1178..1379 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 1179..1379 - |
| 1681462902.847306-CDS-Ecto-sp13_S_contig1728:1841..2132 | 1681462902.847306-CDS-Ecto-sp13_S_contig1728:1841..2132 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 1842..2132 - |
| 1681462902.8576193-CDS-Ecto-sp13_S_contig1728:2501..3053 | 1681462902.8576193-CDS-Ecto-sp13_S_contig1728:2501..3053 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 2502..3053 - |
| 1681462902.8742085-CDS-Ecto-sp13_S_contig1728:3239..3323 | 1681462902.8742085-CDS-Ecto-sp13_S_contig1728:3239..3323 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 3240..3323 - |
| 1681462902.8830433-CDS-Ecto-sp13_S_contig1728:3651..3765 | 1681462902.8830433-CDS-Ecto-sp13_S_contig1728:3651..3765 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 3652..3765 - |
| 1681462902.8917313-CDS-Ecto-sp13_S_contig1728:4404..5159 | 1681462902.8917313-CDS-Ecto-sp13_S_contig1728:4404..5159 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 4405..5159 - |
| 1681462902.9014513-CDS-Ecto-sp13_S_contig1728:5243..6737 | 1681462902.9014513-CDS-Ecto-sp13_S_contig1728:5243..6737 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 5244..6737 - |
| 1681462902.9113512-CDS-Ecto-sp13_S_contig1728:7153..7703 | 1681462902.9113512-CDS-Ecto-sp13_S_contig1728:7153..7703 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1728 7154..7703 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1728.5147.1 >prot_Ecto-sp13_S_contig1728.5147.1 ID=prot_Ecto-sp13_S_contig1728.5147.1|Name=mRNA_Ecto-sp13_S_contig1728.5147.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1347bp
MMDVEEIDDNSSQGANLPPATLALATNKRTKTKKDPPAVAPSSTLTRFLG
PAGPPSRSAWDDVNRQCPVCQQTGFSSRSLALHVNDCLERTQADASDSES
AAGGRKDAAGGVGNPDGKEAGSAITDVTGSGGSEGNTRRMSRERTPKGKV
VHRRGGGQQVRQDKAAKKMKTLQGERAIDTERAASATSKARVSHTRNQAA
DKTKSNTRAALQHCLPDPTQSSSPDGSQQPTPLRRRALGLARPKGHQIVS
DAMPTPATASDASRARKGCGSRALDEIAQAQLLYLREASARGPAHGGGWL
GTQLFPTPDEEEESVDDGSMYCCCAGTGGGEGACRSSCGVGECGTGRNKR
MRKENRRVRGRPASWGARPNDEQRGWFGTWPAGGSVDDGGVDCWGDGDGY
LTLKAFPPPETLVESDGEDDSDGGGAVMPADAAQSKRLGEEGSPAPSSRA
DRFLQVFSRLQPARRALRLHEPPSPPPTPQDLGDNLTNAKVKNVSTRSSQ
TAVAPTNKNTIASSSGPQQAERPGGSPTMRPSVELEPGGAGNSARTGTAR
SCEGERVRELTTPPPKCTALETISEVSANNNRRPSATTASSPVQSTSAAI
IASLKPVSGHKISRKQPPDERPRQQRQPAHRSGEEGSRRHEQEGNSRISL
EGASSKSSLPTPTVRRTSTFQVQACSGGVENVAVSAQSVNPPRVVKTPAK
RYGPANESAADASSEQSGNSPRVVKTPAKRNRPANESAASAKAPSSVGSE
CATSALQTRRPVAVANENLTIGEHRKRTAHVDRTPVDATTHGVPQPPPRH
GSSTSSDGVKRSMPGATVAKKRTSSSHERNVRGSSMDAGGHRRSQRDPPP
GLQRAIHTSSQWNGSRSRGALASRASSGLLRSADLPARSEYQRKKNGNAK
VAPAANDGVVDLAGSNSSQLEECEGRKADVPQKGSLTVVWEHGATLRDSW
SIDSSHELGRLAFGASLDYAAVWYLSPADADCVGVFRYRVVPHPRLAPAG
GWISGSGRLRDDPYTIVKAEAASSIRPSKAASRDRGDEQEGSGQRQPNLD
PHHHQGRVGVEGPTKSTHQAADGGYTAAAPSRGHAERSRGTNGTHGRHAK
RYEPAEESQSDRVSAGPTAEGGRRTQPQFRSKVLPKAVSAGGSFGLATSP
SAKALEANDSGDKVTCPVCNRGMDHWKSGQRQQHVHACLIKQPSSAKKNR
LAGDARPCASRPSGVAHRSSLQFDGSSDPGESTTPRPERGPGVRKTDGTG
SSANRQEGPPDPSESPRSTRVSLQGVFSPKPARGPDGTNAVSASRGTAPA
RATTGRVSSSKGLTECPVCGVSFGGRQGQWERQAHVQQCLDSAWEP* back to topmRNA from alignment at Ecto-sp13_S_contig1728:1009..8382- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1728.5147.1 ID=mRNA_Ecto-sp13_S_contig1728.5147.1|Name=mRNA_Ecto-sp13_S_contig1728.5147.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7374bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1728:1009..8382- (Ectocarpus species13 EcNAP12_S_4_19m)
CACGTATCAACTGCTACACCAACGCCGGCCGTCAGCAGTCGTTTAGAGCA
GGGGCAGGGAGTGGAAGAGAGAAGAACGAGGGGTGCACTCAGGTGGGAGT
TGATGCGTGCGCTGTTGGTGTTTTGCGGTGTCTGATGGTGCAAGATGGAA
TCACGCAAATCTATCATGTTGCTGCTGCCGACGGCCGATGGATGTACCTG
CGAATTCGCTGTGCTCTGCGCGAGTGCGGTGTGGTGCAAAACCTTATCCG
CGACGGCAGATTCAAGCTTCCTGTGTGCTGACTTCTCAGCGACAGCACAA
CAAAGAAATTTTCTTCTTGCATTCCCACAGAAAAAACATGTACGCGAATG
TGACTACAATACTGCTGTGCCCCACCATGTACAAGTACGTCGAGCTAGAG
CTGTACTGGCTACTTTCCTGGACCGTAAATGCTGTAGACAGACTCGCAGG
TCACTGTCTGTAGGTACTGATTCCTGCGGTATACCGCTGTGAGTACCTCT
GCTGTGCATTCTGCGGTACCATAGAGCCTTGCGTGTTGTACTTGGTTGTC
GTTGACCACTCAGCCCCTGGACAATGCCGCTCGTTCAAACGCACGTCGTA
CTCCTCAGACAAGGTCATTTACAGGAGCTGGTGTGTCATCCGTTGCTCAG
CAAGACGGCCGGATGCTCGGTCCCTGGAGATGATGGACGTCGAGGAAATC
GACGACAACTCCAGCCAAGGGGCCAACCTTCCACCAGCAACCTTAGCCTT
AGCCACGAACAAGCGGACCAAGACCAAGAAGGACCCTCCCGCCGTAGCTC
CTTCCAGCACCCTCACTCGCTTCCTAGGACCCGCCGGCCCTCCGTCCCGT
TCTGCGTGGGACGATGTGAATCGGCAGTGCCCGGTGTGCCAGCAGACAGG
ATTCTCGTCGCGGTCTTTAGCTTTGCACGTGAACGACTGCCTCGAAAGAA
CTCAGGCTGATGCTAGCGATAGTGAGAGTGCGGCTGGCGGGCGGAAAGAT
GCAGCCGGTGGGGTAGGGAATCCCGATGGAAAGGAAGCGGGCAGCGCCAT
CACTGATGTGACTGGCAGTGGAGGTAGTGAAGGCAACACTCGAAGAATGT
CAAGAGAAAGGACACCAAAGGGTAAGGTTGTACACCGTCGCGGAGGGGGG
CAGCAAGTTCGTCAGGACAAGGCTGCGAAGAAGATGAAGACGCTTCAGGG
TGAACGGGCTATTGATACCGAGAGAGCAGGTGCGCTGGCATTCGCTCTTC
AACAGTGGAGGTGCCACAGCCGTGACCCCGTCAGCAGAGTTTTTTTCCTT
TTGTTGGCGCTACGGCCGTGCATTGAACTCACCACTCGTTACGCTATACA
CAAGTACCAGGAGGTGATTGTGCTTTGCAGCAGACCTCGATCTCGAACAT
GGCCGCCGTCATTGCGGCTTCACGGCGATGTAGACTATGCATACGACAAG
CACTTTTCCCGAGAGGCCTCCCCTGTACTATCCTATAGTAGGCCTACGGC
GCGGCGGCTGCTGTTCAGTCAGTGTAAGCACCCATTGTTTCTCGGTCGAC
GATATGTGCAACGTCGAAATTGTTCTCCATCCCCCCATCGTTCGTGGCGC
CACCTCTCAACCGTCTCTTGCGTTGTGTCTTGTGTGTATTCGTAGCCTCG
GCTACCTCGAAGGCTCGGGTTTCTCACACCCGAAACCAAGCTGCCGACAA
GACGAAGTCCAACACAAGAGCAGCTCTCCAGCATTGCCTGCCCGATCCCA
CACAGTCATCTTCCCCCGATGGGTCGCAGCAGCCAACCCCACTTCGCCGT
CGAGCCTTAGGGTTAGCTCGGCCAAAGGGGCACCAGATCGTCAGCGACGC
CATGCCAACACCTGCTACTGCTTCGGATGCAAGCAGAGCACGCAAAGGCT
GCGGCTCCCGCGCCCTCGATGAAATCGCGCAGGCCCAGCTGTTGTATCTG
CGAGAGGCCTCTGCGCGTGGGCCTGCGCACGGCGGTGGATGGCTCGGCAC
GCAACTTTTCCCGACACCCGATGAGGAAGAAGAGTCAGTAGACGATGGCT
CCATGTATTGCTGCTGTGCTGGCACCGGTGGTGGTGAAGGTGCATGTCGG
TCGAGCTGTGGGGTGGGTGAGTGCGGAACTGGACGAAACAAAAGGATGCG
GAAAGAAAATCGTCGAGTGCGCGGCCGACCAGCGTCGTGGGGTGCTCGTC
CGAACGACGAACAGCGGGGTTGGTTCGGAACCTGGCCAGCTGGCGGGAGT
GTCGACGACGGCGGCGTTGACTGCTGGGGAGATGGAGACGGCTATCTCAC
GCTGAAGGCATTTCCTCCGCCCGAAACGCTGGTAGAGTCTGATGGTGAGG
ATGATAGTGATGGTGGCGGAGCTGTCATGCCGGCAGACGCCGCACAATCG
AAGCGCTTAGGCGAAGAAGGTAGCCCTGCCCCATCGTCAAGAGCTGACCG
CTTCCTGCAGGTGTTTTCTCGGCTGCAGCCCGCTCGTAGGGCGCTGAGAC
TTCACGAGCCGCCATCGCCACCGCCAACGCCACAAGACCTTGGTGACAAC
CTTACCAACGCCAAGGTCAAGAACGTCAGTACACGATCGTCACAGACAGC
AGTCGCCCCGACAAACAAGAACACGATTGCCAGTAGCTCGGGCCCACAGC
AGGCCGAACGTCCAGGAGGCTCACCGACCATGAGACCTTCCGTAGAGCTT
GAGCCGGGCGGGGCTGGAAATAGTGCCAGGACGGGGACTGCGCGTAGCTG
CGAGGGTGAGAGGGTCCGCGAGTTGACCACGCCCCCGCCGAAATGCACGG
CACTCGAAACGATATCTGAAGTCAGCGCTAACAACAACCGGCGACCGAGC
GCCACGACAGCTTCTTCCCCAGTGCAAAGTACTTCGGCTGCGATCATCGC
CTCGTTAAAGCCTGTTTCTGGGCACAAGATTAGCCGGAAGCAACCGCCAG
ATGAGCGCCCACGACAACAACGCCAGCCTGCCCACCGGAGTGGCGAAGAG
GGATCTCGGCGACATGAGCAGGAGGGCAACAGCCGCATCAGCTTGGAGGG
GGCTAGCAGCAAATCATCTTTGCCAACGCCGACGGTACGACGTACCTCCA
CTTTCCAAGTGCAAGCCTGCTCCGGAGGCGTGGAAAACGGTGTGAGCGCG
CCTAGCGCGAATCCCGCCAGGGTTGTCAAGACTCCCGCCAAAAGAAATGG
GCCGGCAAATGAGAGTGCCGCAGTTGCTGTGAGCGCGCAAAGCGTGAATC
CCCCCAGGGTGGTCAAGACTCCCGCCAAAAGGTATGGGCCGGCAAACGAG
AGTGCTGCGGATGCTTCGAGCGAGCAGAGCGGGAATTCCCCCAGGGTTGT
CAAGACTCCGGCCAAAAGAAATAGGCCGGCAAATGAGAGTGCTGCAAGTG
CGAAGGCTCCAAGCTCGGTGGGGTCGGAGTGCGCGACGTCGGCGCTTCAG
ACTAGGCGTCCGGTTGCGGTCGCGAATGAAAACCTGACCATTGGCGAGCA
TCGAAAACGGACGGCTCATGTCGATCGCACCCCGGTGGACGCGACAACAC
ATGGTGTGCCACAGCCACCTCCTCGGCACGGGAGCTCGACGAGTTCTGAT
GGAGTGAAACGCTCTATGCCAGGCGCGACGGTTGCGAAGAAGCGAACATC
TAGCTCCCATGAGAGGAATGTAAGGGGATCGTCGATGGATGCCGGTGGCC
ACCGCAGGTCACAGAGAGACCCACCTCCTGGCCTGCAGCGCGCGATACAT
ACGTCCAGCCAATGGAACGGCTCTAGATCGAGGGGAGCGTTGGCCTCACG
GGCGTCTTCCGGGTTGCTGCGAAGTGCTGACCTCCCAGCACGTTCTGAGT
ATCAGCGCAAGAAAAACGGGAATGCGAAGGTCGCGCCTGCTGCGAACGAT
GGTGTCGTGGACCTTGCTGGGAGCAACTCATCGCAGCTAGAAGAGTGTGA
AGGACGCAAGGCGGACGTGCCGCAGAAGGTATTGGGTCAGTGGTTATGCC
TAGCGCCAGTGGCTCGAAGGCTGGGACGATATGAACACGTGCCCGATATG
GCCTAATTACCATGCAGGCGCTGTTTGCCGTGCGGTAGGAGTTACGTCCA
CATCGTGACTAAATCAAGTGATCGGTTTTTTTATCTTTAGAGTTGTGAAT
TACCTCGTCTTGACGGCCAGCCTTTCTTTCCGCCTCGCGCACCTCTCCAA
AACATTCAAGGTCCATGTCATCGGTGAACGTAGAACACAAATAGAGTGCA
GGGGGTGTCTGGTGCGCCACAGTTGGAAGGTTTCCCCTGTTTGGACCAGA
AAGAGGCCTCGGCTGCAATGGTCGCCACTGACATGACATGGTGTGGAGGC
CAAGGTAAACAGCTATTGCGTACTCACGTTTCCTCACTCGCCATCTCCTC
GCTTCCTCGGATTTCTCGGATTCCTCGCAGTCGCCAATCCTTGCATCAAC
ATGACGGTTTCGACGTTCCGGCGGGTTTATCGATAGCCTGTGCTGATACC
GAACGTACGTTGGGTACAAGTGGTTGCGTTTTCAACAAAATAGGCCTCAA
CCATAATTACCCTTTGAGTCTTCTGTATACGATTGGACCCCTTTATCGTA
CGTGTACCCCGCTTCAGGGCTCTCTAACTGTCGTCTGGGAGCATGGAGCA
ACTCTTCGGGACAGCTGGTCTATCGACAGCTCGCACGAGCTCGGAAGGTT
GGCGTTCGGGGCCTCGCTGGACTATGCTGCGGTGAGCGTACCCCGGATTG
TGCTCTTTTTTGCGAACTCTGTTGTATTTGAGTTTTCCGGTAGCGTGAGG
CAGGTGGCACGTTCGTTCATGCAGTCCCTTGGTGCATGTTCCCGTGCAAA
TCAATCGAACCACCATGCTTGCATCCTTATGGATCCGACGTAACGCTTGG
GCACGCTTTTGTGCACCCGTTGATGCCACGTTGCCAAATGGTGGTCGGCC
ATCGTGTACACTAGCCTGGTTACTGCCGAAGACCGATCTACGAAATCCTC
CACGTGCCTCATGTTACCCACTCCGGCATGTTTTTTGTCAACATTTTCGT
GCGTTGCAGGTCTGGTATCTATCTCCTGCCGACGCGGACTGTGTCGGCGT
TTTCCGGTACCGCGTCGTGCCCCATCCTCGCCTTGCACCCGCGGTAAGCT
GTGTGTCGTTGTACCAGACGTTGCACCCCTCGGTTTTTCCAGTTGCATCG
TAGCTCTCTGCTTTTCTCACACTGTTCAAGCCTGTCTCAGCCCTTCGTGG
TTGCCACTTTGAAGGTTGTCACCATTTGCTTCCTGTGGTTAATATTACGC
CTGTAACCTTCACGGACCCTTCTTGATAGGGCGGTTGGATCAGTGGAAGC
GGGCGACTCCGAGACGATCCCTATACCATCGTCAAAGCTGAGGCTGCTTC
CTCCATTCGTCCTAGCAAGGCAGCCAGTCGAGATCGAGGGGACGAGCAGG
AGGGCTCAGGGCAGAGGCAACCAAATCTCGATCCCCATCACCACCAAGGT
AGAGTGGGAGTCGAAGGCCCGACTAAGTCCACGCATCAAGCGGCTGATGG
CGGGTACACAGCAGCTGCGCCGTCGCGTGGCCACGCGGAGCGATCGCGAG
GAACAAATGGCACCCATGGGCGGCATGCGAAGCGCTATGAACCAGCGGAA
GAGAGTCAAAGCGATCGCGTGTCTGCGGGTCCAACGGCGGAGGGGGGGCG
ACGAACGCAGCCGCAATTTCGTTCTAAAGTCTTGCCGAAAGCCGTCTCGG
CTGGGGGGAGCTTCGGGCTCGCAACAAGCCCTTCCGCAAAAGCACTGGAG
GCGAACGACTCTGGCGACAAGGTGACGTGTCCCGTTTGCAACCGAGGCAT
GGACCACTGGAAGTCGGGGCAGCGCCAGCAGGTGATCCACAAGCGCGCGG
CCACCTTTGTGAAAGTGCTTCACCACCGTTGCTTTTGGTTCTGGATACAT
CGCAGGGCGCGCTAGTCTTTGTAGCGAATCTGGCATTCTCCCGTGGACCC
TTTGCAAACGGTTGTGAAGAGAGTGAAGTTGAAAAGACGTCAACGTAGCC
ACGTCGCGTGGGTTAGCATGTGTCTATTTCGTTCGTTGTTGTTCACTCAC
AAGCCTCGCTGGTACATAAGGTGTCCTATCCAGCCGTTGCTGTAATTCAT
GTTCCCTCAAGCCTCTCGACCTAGTCGGCCGCCAAATGTCGTACCAACTA
ACAACGTCTTTCTCCGTCTCACAAAAATTTCCCGCCGTCCGTTTCCACAG
CACGTCCACGCCTGCCTGATCAAGCAGCCGTCCTCCGCAAAGAAGAACCG
CCTAGCCGGAGACGCAAGGCCGTGCGCCTCGCGGCCGTCGGGGGTTGCAC
ACCGATCGTCGCTTCAGTTCGATGGGTCGAGCGACCCCGGTGAATCAACT
ACACCACGTCCCGAGCGTGGGCCAGGAGTGCGAAAGACGGATGGAACGGG
ATCGTCCGCGAACAGGCAAGAAGGGCCGCCAGATCCTTCGGAAAGCCCGA
GGTCAACGCGGGTGTCACTTCAGGGGGTATTTTCACCCAAAGTGAGCTGG
TGAACCTTCTTTTGTAGTGACAGCAGTATGTGTTTGTTGTCCCAGTCGGA
TTTGCTCACAGCAGGCCCGATGATGAGCACGCCGTCCATTGCATTTTTAG
TGGTGCACTACTTCAGGATTGCATCATCCACGCGTTATGTGTGTCGTGAA
GCTCCGACAAATTCCCAGATGGATATCTACATCTAAAATCTCTTCGAACC
CAGCGAGATACTCATCTTTTGCTAAGGTATGGTACATTTTAGCCTATGTT
GAGGAAGCGCACGTGTCTCTCCCTTTTGCGGAACGAGTCTAGACCAAGAT
GTAGGAAATGAAAGGCGATTTTACCCTCGTGGGCTCCTTCTGCGGTGCTT
CGTTACAACCTGCCACTGCTGTGATGTTTGGGGATCTTGCTCGATTATGG
CATGCCGAATACCCACCCCGCCCACCCCCGCATCTCCCCACCGATCCTGT
CAGCCTGCACGTGGCCCAGATGGAACAAATGCGGTCTCGGCATCAAGAGG
GACGGCGCCGGCTAGGGCCACCACGGGGAGAGTGTCGTCATCGAAGGGCC
TCACTGAGTGCCCTGTCTGTGGAGTTAGTTTTGGAGGCCGACAGGGGCAG
TGGGAGAGACAAGCGCACGTGCAGCAATGCCTGGATAGTGCCTGGGAACC
CTAGAGTAGGTGTTTGGCTTTGGAGAGAAAGGTGGTGGAAAGAACACGGC
GTCGATAAGCATTTGGACATGAACCGCTCCACATGAACGGAGGACGAGGT
TGGTGTTTATCGGAGGGAAGGCCGGGGGCCGTGGACTGGTAGTAACAGTA
AGGTTTTGCTTCCGCCACGAATCC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1728:1009..8382- >mRNA_Ecto-sp13_S_contig1728.5147.1 ID=mRNA_Ecto-sp13_S_contig1728.5147.1|Name=mRNA_Ecto-sp13_S_contig1728.5147.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4041bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1728:1009..8382- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGACGTCGAGGAAATCGACGACAACTCCAGCCAAGGGGCCAACCT
TCCACCAGCAACCTTAGCCTTAGCCACGAACAAGCGGACCAAGACCAAGA
AGGACCCTCCCGCCGTAGCTCCTTCCAGCACCCTCACTCGCTTCCTAGGA
CCCGCCGGCCCTCCGTCCCGTTCTGCGTGGGACGATGTGAATCGGCAGTG
CCCGGTGTGCCAGCAGACAGGATTCTCGTCGCGGTCTTTAGCTTTGCACG
TGAACGACTGCCTCGAAAGAACTCAGGCTGATGCTAGCGATAGTGAGAGT
GCGGCTGGCGGGCGGAAAGATGCAGCCGGTGGGGTAGGGAATCCCGATGG
AAAGGAAGCGGGCAGCGCCATCACTGATGTGACTGGCAGTGGAGGTAGTG
AAGGCAACACTCGAAGAATGTCAAGAGAAAGGACACCAAAGGGTAAGGTT
GTACACCGTCGCGGAGGGGGGCAGCAAGTTCGTCAGGACAAGGCTGCGAA
GAAGATGAAGACGCTTCAGGGTGAACGGGCTATTGATACCGAGAGAGCAG
CCTCGGCTACCTCGAAGGCTCGGGTTTCTCACACCCGAAACCAAGCTGCC
GACAAGACGAAGTCCAACACAAGAGCAGCTCTCCAGCATTGCCTGCCCGA
TCCCACACAGTCATCTTCCCCCGATGGGTCGCAGCAGCCAACCCCACTTC
GCCGTCGAGCCTTAGGGTTAGCTCGGCCAAAGGGGCACCAGATCGTCAGC
GACGCCATGCCAACACCTGCTACTGCTTCGGATGCAAGCAGAGCACGCAA
AGGCTGCGGCTCCCGCGCCCTCGATGAAATCGCGCAGGCCCAGCTGTTGT
ATCTGCGAGAGGCCTCTGCGCGTGGGCCTGCGCACGGCGGTGGATGGCTC
GGCACGCAACTTTTCCCGACACCCGATGAGGAAGAAGAGTCAGTAGACGA
TGGCTCCATGTATTGCTGCTGTGCTGGCACCGGTGGTGGTGAAGGTGCAT
GTCGGTCGAGCTGTGGGGTGGGTGAGTGCGGAACTGGACGAAACAAAAGG
ATGCGGAAAGAAAATCGTCGAGTGCGCGGCCGACCAGCGTCGTGGGGTGC
TCGTCCGAACGACGAACAGCGGGGTTGGTTCGGAACCTGGCCAGCTGGCG
GGAGTGTCGACGACGGCGGCGTTGACTGCTGGGGAGATGGAGACGGCTAT
CTCACGCTGAAGGCATTTCCTCCGCCCGAAACGCTGGTAGAGTCTGATGG
TGAGGATGATAGTGATGGTGGCGGAGCTGTCATGCCGGCAGACGCCGCAC
AATCGAAGCGCTTAGGCGAAGAAGGTAGCCCTGCCCCATCGTCAAGAGCT
GACCGCTTCCTGCAGGTGTTTTCTCGGCTGCAGCCCGCTCGTAGGGCGCT
GAGACTTCACGAGCCGCCATCGCCACCGCCAACGCCACAAGACCTTGGTG
ACAACCTTACCAACGCCAAGGTCAAGAACGTCAGTACACGATCGTCACAG
ACAGCAGTCGCCCCGACAAACAAGAACACGATTGCCAGTAGCTCGGGCCC
ACAGCAGGCCGAACGTCCAGGAGGCTCACCGACCATGAGACCTTCCGTAG
AGCTTGAGCCGGGCGGGGCTGGAAATAGTGCCAGGACGGGGACTGCGCGT
AGCTGCGAGGGTGAGAGGGTCCGCGAGTTGACCACGCCCCCGCCGAAATG
CACGGCACTCGAAACGATATCTGAAGTCAGCGCTAACAACAACCGGCGAC
CGAGCGCCACGACAGCTTCTTCCCCAGTGCAAAGTACTTCGGCTGCGATC
ATCGCCTCGTTAAAGCCTGTTTCTGGGCACAAGATTAGCCGGAAGCAACC
GCCAGATGAGCGCCCACGACAACAACGCCAGCCTGCCCACCGGAGTGGCG
AAGAGGGATCTCGGCGACATGAGCAGGAGGGCAACAGCCGCATCAGCTTG
GAGGGGGCTAGCAGCAAATCATCTTTGCCAACGCCGACGGTACGACGTAC
CTCCACTTTCCAAGTGCAAGCCTGCTCCGGAGGCGTGGAAAACGTTGCTG
TGAGCGCGCAAAGCGTGAATCCCCCCAGGGTGGTCAAGACTCCCGCCAAA
AGGTATGGGCCGGCAAACGAGAGTGCTGCGGATGCTTCGAGCGAGCAGAG
CGGGAATTCCCCCAGGGTTGTCAAGACTCCGGCCAAAAGAAATAGGCCGG
CAAATGAGAGTGCTGCAAGTGCGAAGGCTCCAAGCTCGGTGGGGTCGGAG
TGCGCGACGTCGGCGCTTCAGACTAGGCGTCCGGTTGCGGTCGCGAATGA
AAACCTGACCATTGGCGAGCATCGAAAACGGACGGCTCATGTCGATCGCA
CCCCGGTGGACGCGACAACACATGGTGTGCCACAGCCACCTCCTCGGCAC
GGGAGCTCGACGAGTTCTGATGGAGTGAAACGCTCTATGCCAGGCGCGAC
GGTTGCGAAGAAGCGAACATCTAGCTCCCATGAGAGGAATGTAAGGGGAT
CGTCGATGGATGCCGGTGGCCACCGCAGGTCACAGAGAGACCCACCTCCT
GGCCTGCAGCGCGCGATACATACGTCCAGCCAATGGAACGGCTCTAGATC
GAGGGGAGCGTTGGCCTCACGGGCGTCTTCCGGGTTGCTGCGAAGTGCTG
ACCTCCCAGCACGTTCTGAGTATCAGCGCAAGAAAAACGGGAATGCGAAG
GTCGCGCCTGCTGCGAACGATGGTGTCGTGGACCTTGCTGGGAGCAACTC
ATCGCAGCTAGAAGAGTGTGAAGGACGCAAGGCGGACGTGCCGCAGAAGG
GCTCTCTAACTGTCGTCTGGGAGCATGGAGCAACTCTTCGGGACAGCTGG
TCTATCGACAGCTCGCACGAGCTCGGAAGGTTGGCGTTCGGGGCCTCGCT
GGACTATGCTGCGGTCTGGTATCTATCTCCTGCCGACGCGGACTGTGTCG
GCGTTTTCCGGTACCGCGTCGTGCCCCATCCTCGCCTTGCACCCGCGGGC
GGTTGGATCAGTGGAAGCGGGCGACTCCGAGACGATCCCTATACCATCGT
CAAAGCTGAGGCTGCTTCCTCCATTCGTCCTAGCAAGGCAGCCAGTCGAG
ATCGAGGGGACGAGCAGGAGGGCTCAGGGCAGAGGCAACCAAATCTCGAT
CCCCATCACCACCAAGGTAGAGTGGGAGTCGAAGGCCCGACTAAGTCCAC
GCATCAAGCGGCTGATGGCGGGTACACAGCAGCTGCGCCGTCGCGTGGCC
ACGCGGAGCGATCGCGAGGAACAAATGGCACCCATGGGCGGCATGCGAAG
CGCTATGAACCAGCGGAAGAGAGTCAAAGCGATCGCGTGTCTGCGGGTCC
AACGGCGGAGGGGGGGCGACGAACGCAGCCGCAATTTCGTTCTAAAGTCT
TGCCGAAAGCCGTCTCGGCTGGGGGGAGCTTCGGGCTCGCAACAAGCCCT
TCCGCAAAAGCACTGGAGGCGAACGACTCTGGCGACAAGGTGACGTGTCC
CGTTTGCAACCGAGGCATGGACCACTGGAAGTCGGGGCAGCGCCAGCAGC
ACGTCCACGCCTGCCTGATCAAGCAGCCGTCCTCCGCAAAGAAGAACCGC
CTAGCCGGAGACGCAAGGCCGTGCGCCTCGCGGCCGTCGGGGGTTGCACA
CCGATCGTCGCTTCAGTTCGATGGGTCGAGCGACCCCGGTGAATCAACTA
CACCACGTCCCGAGCGTGGGCCAGGAGTGCGAAAGACGGATGGAACGGGA
TCGTCCGCGAACAGGCAAGAAGGGCCGCCAGATCCTTCGGAAAGCCCGAG
GTCAACGCGGGTGTCACTTCAGGGGGTATTTTCACCCAAACCTGCACGTG
GCCCAGATGGAACAAATGCGGTCTCGGCATCAAGAGGGACGGCGCCGGCT
AGGGCCACCACGGGGAGAGTGTCGTCATCGAAGGGCCTCACTGAGTGCCC
TGTCTGTGGAGTTAGTTTTGGAGGCCGACAGGGGCAGTGGGAGAGACAAG
CGCACGTGCAGCAATGCCTGGATAGTGCCTGGGAACCCTAG back to top
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