mRNA_Ecto-sp13_S_contig17277.5145.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A836CCQ8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ8_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.350e-94 Identity = 129/178 (72.47%), Postives = 149/178 (83.71%), Query Frame = 1
Query: 1 ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSPDPNEIV 534
+CDF+G++ L CGRE+PW+ APWYD LKAPIRAVNIGGLFVLERWI+P F WG+ +GI DQHSFS KCG+LG CE +K HWKN+YT QDF DMK +GLNSIRLPVGWWYFA +++APYI+PDEDLY HPIT V++WA AGL VILDLHGAPG QNGLDNSGLTSPDPN +V
Sbjct: 155 SCDFEGISTLLCGREDPWKRAPWYDTLKAPIRAVNIGGLFVLERWILPAFVDWGEPTGIIDQHSFSVKCGDLGICEDIKAHWKNFYTAQDFHDMKSMGLNSIRLPVGWWYFAKYANINSAPYIIPDEDLYSLDHPITRVLKWAHDAGLQVILDLHGAPGGQNGLDNSGLTSPDPNNLV 332
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A4D9D2R7_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R7_9STRA) HSP 1 Score: 276 bits (705), Expect = 2.580e-86 Identity = 118/175 (67.43%), Postives = 145/175 (82.86%), Query Frame = 1
Query: 1 ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSPDPN 525
ACDF+ L LTCGREEPWRT PWY+++K PIRAVNIGGLFVLE+WI+P F +WG+E+GI DQ++FS +C ++ C+QLK HW+ WY+ DF MKK GLN+IRLPVG+WYFA + ++ APY+VPD+DL+DAHHPIT+VIRWA AGL VILDLHGAP SQNGLDNSG + DPN
Sbjct: 93 ACDFNALAYLTCGREEPWRTVPWYNKIKNPIRAVNIGGLFVLEQWILPGFVTWGEETGIWDQYTFSSECKKMDICDQLKQHWETWYSADDFLQMKKFGLNTIRLPVGYWYFAERVGLNPAPYLVPDQDLFDAHHPITNVIRWADEAGLQVILDLHGAPYSQNGLDNSGRMTDDPN 267
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: D8LEF5_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF5_ECTSI) HSP 1 Score: 199 bits (505), Expect = 1.900e-57 Identity = 105/178 (58.99%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 1 ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSPDPNEIV 534
ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGD+SGIRDQHSFSEKCGELGT AGL+VILDLHGAPGSQNGLDNSGLTSPDPNEIV
Sbjct: 101 ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDDSGIRDQHSFSEKCGELGTD----------------------------------------------------------------------AGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIV 208
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A7S2XF99_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XF99_9EUKA) HSP 1 Score: 190 bits (483), Expect = 2.790e-54 Identity = 93/181 (51.38%), Postives = 116/181 (64.09%), Query Frame = 1
Query: 1 ACDFDGLTVLTCGREE--PWRTAPWYDQL-KAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSF--SEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLY-DAHHPITDVIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSPDPN 525
+C F L L CG + PWR PW +L P+R VN+GGLFVLE WI P F WGDE IRDQ+++ +E +LKDHW ++Y+ DF+ M K G+N+ R+PVGWWYFA T + YI PD D+ D HPIT VI WA + +ILDLHGAPGSQNGLDNSG+ S DP+
Sbjct: 128 SCAFQNLAHLWCGEKRFMPWRRTPWASRLGHKPLRGVNLGGLFVLEPWICPGFADWGDE--IRDQYTYCKNESVSLSTKTNKLKDHWASFYSEDDFKLMSKYGINTARMPVGWWYFAEATGLDPLHYITPDNDIMVDMDHPITKVISWAYKHNIQIILDLHGAPGSQNGLDNSGIRSMDPD 306
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A6T6YDK2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6YDK2_9EUKA) HSP 1 Score: 187 bits (475), Expect = 2.000e-52 Identity = 93/180 (51.67%), Postives = 114/180 (63.33%), Query Frame = 1
Query: 1 ACDFDGLTVLTCG--REEPWRTAPWYDQL-KAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGELGT--CEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLY-DAHHPITDVIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSPDP 522
+CDF G+ L CG R PWR PW L PIR VN+G LFVLE WI P FT WGD+ IRDQ+++ + + L+ HW +YT +DF+ M + GLN R+PVGWWYF + PY VP D+ D HPIT VIR+A+ G+ VILDLHGAPGSQNGLDNSG+ S DP
Sbjct: 200 SCDFKGVAQLWCGEHRHYPWRFTPWAKLLGNKPIRGVNVGSLFVLEPWIAPGFTEWGDD--IRDQYTYCVSGNQTDDEKIKALEHHWATFYTEEDFKLMSEYGLNVARIPVGWWYFGEAAGLDPKPYFVPKNDIQTDLDHPITKVIRYAQKYGIQVILDLHGAPGSQNGLDNSGIRSMDP 377
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A6H5JXP3_9PHAE (GH5 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP3_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.120e-47 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1
Query: 1 ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGEL 216
ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGEL
Sbjct: 101 ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDESGIRDQHSFSEKCGEL 172
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A2T3AR05_AMORE (Glycoside hydrolase family 5 protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3AR05_AMORE) HSP 1 Score: 131 bits (329), Expect = 5.010e-33 Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 91 IRAVNIGGLFVLERWIVPT-FTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITD-VIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSP 516
+R VN+GG FVLE WI P+ F W + G+ D+++F++ G QL+ HW NW T DF ++ +GLN +R+P+G+W A + PY+ PI D I WA+ AGL V++DLHGAPGSQNG DNSG P
Sbjct: 31 VRGVNLGGWFVLEPWITPSLFAPWANGGGVVDEYTFTQALGPTAAQNQLEAHWNNWITQDDFNEIASMGLNHVRIPIGYW---AINPLPGDPYV-------QGQLPILDNAIGWARSAGLKVMIDLHGAPGSQNGFDNSGRYGP 164
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A3E2HHU6_SCYLI (Cellulase domain-containing protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HHU6_SCYLI) HSP 1 Score: 129 bits (324), Expect = 2.690e-32 Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 70 YDQLKAPIRAVNIGGLFVLERWIVPT-FTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSP 516
+D +R VN+GG FVLE WI P+ F W + G+ D+++F + G+ QL HW W T DF+++ +GLN +R+P+G+W A + PY+ + D I WA+ AGL V+LD+HG PGSQNG DNSG P
Sbjct: 28 FDYNNEKVRGVNLGGWFVLEPWITPSIFQPWANGGGVVDEYTFCQTLGKAAAQSQLTQHWNTWITQADFQEIASIGLNHVRIPLGYW---AVNPLPGDPYVQGQLQVLD------QAIDWARAAGLKVMLDIHGVPGSQNGFDNSGRYGP 168
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A425BU95_9PEZI (Cellulase domain-containing protein n=1 Tax=Scytalidium sp. 3C TaxID=2487125 RepID=A0A425BU95_9PEZI) HSP 1 Score: 129 bits (323), Expect = 2.900e-32 Identity = 62/147 (42.18%), Postives = 86/147 (58.50%), Query Frame = 1
Query: 70 YDQLKAPIRAVNIGGLFVLERWIVPT-FTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITD-VIRWAKVAGLFVILDLHGAPGSQNGLDNSG 504
+D +R VN+GG FVLE WI P+ F W + G+ D+++F + G+ QL HW W T DF++++ VGLN +R+P+G+W A + PY+ PI D I WA+ AGL V+LD+HG PGSQNG DNSG
Sbjct: 10 FDYNNDKVRGVNLGGWFVLEPWITPSIFEPWANGGGVVDEYTFCQAVGKSAAQSQLTQHWNTWITEADFKEIESVGLNHVRIPIGYW---ALNPLDGDPYV-------QGQLPILDNAIGWARSAGLKVMLDIHGVPGSQNGFDNSG 146
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Match: A0A8H4RRL6_9HELO (Cellulase domain-containing protein n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4RRL6_9HELO) HSP 1 Score: 127 bits (319), Expect = 3.710e-32 Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 70 YDQLKAPIRAVNIGGLFVLERWIVPT-FTSWGDESGIRDQHSFSEKCGELGTCEQLKDHWKNWYTPQDFEDMKKVGLNSIRLPVGWWYFAAKTAMSAAPYIVPDEDLYDAHHPITDVIRWAKVAGLFVILDLHGAPGSQNGLDNSGLTSP 516
+D +R VN+GG FVLE WI P+ F W + G+ D+++F++ G QL HW +W T DF+++ GLN +R+P+G+W A + PY+ D I WA+ AGL V+LDLHGAPGSQNG DNSG P
Sbjct: 31 FDYNDNKVRGVNLGGWFVLEPWITPSLFQPWANGGGVVDEYTFTQTLGPQAAQNQLTQHWASWITEADFQEIASFGLNHVRIPIGYW---ALNPLPGDPYVQGQLPFLD------QAIVWARNAGLKVMLDLHGAPGSQNGFDNSGRYGP 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17277.5145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17277.5145.1 >prot_Ecto-sp13_S_contig17277.5145.1 ID=prot_Ecto-sp13_S_contig17277.5145.1|Name=mRNA_Ecto-sp13_S_contig17277.5145.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp ACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFback to top mRNA from alignment at Ecto-sp13_S_contig17277:1044..3358+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17277.5145.1 ID=mRNA_Ecto-sp13_S_contig17277.5145.1|Name=mRNA_Ecto-sp13_S_contig17277.5145.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17277:1044..3358+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17277:1044..3358+ >mRNA_Ecto-sp13_S_contig17277.5145.1 ID=mRNA_Ecto-sp13_S_contig17277.5145.1|Name=mRNA_Ecto-sp13_S_contig17277.5145.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=558bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17277:1044..3358+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |